Query 000711
Match_columns 1338
No_of_seqs 768 out of 5287
Neff 8.2
Searched_HMMs 46136
Date Mon Apr 1 22:25:45 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000711.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000711hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 1E-136 2E-141 1275.1 96.2 1125 105-1328 28-1201(1228)
2 KOG0054 Multidrug resistance-a 100.0 4E-127 9E-132 1220.1 107.6 1110 107-1328 203-1350(1381)
3 PTZ00265 multidrug resistance 100.0 2E-116 5E-121 1179.7 118.5 1156 88-1328 47-1435(1466)
4 PLN03130 ABC transporter C fam 100.0 5E-116 1E-120 1187.4 119.5 1108 107-1328 303-1449(1622)
5 PLN03232 ABC transporter C fam 100.0 6E-115 1E-119 1179.3 117.9 1107 107-1328 303-1446(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 4E-112 8E-117 1153.8 116.4 1110 107-1328 319-1496(1522)
7 PTZ00243 ABC transporter; Prov 100.0 4E-107 9E-112 1099.7 117.4 1124 107-1328 246-1521(1560)
8 TIGR01271 CFTR_protein cystic 100.0 6E-106 1E-110 1089.1 115.8 1116 108-1328 83-1428(1490)
9 KOG0060 Long-chain acyl-CoA tr 100.0 2.7E-88 5.8E-93 772.4 51.9 629 24-660 2-652 (659)
10 COG4178 ABC-type uncharacteriz 100.0 3.5E-77 7.6E-82 707.5 59.2 543 88-653 26-592 (604)
11 KOG0058 Peptide exporter, ABC 100.0 3.8E-75 8.3E-80 688.3 47.5 469 801-1328 195-679 (716)
12 KOG0064 Peroxisomal long-chain 100.0 3.2E-74 7E-79 645.1 48.2 573 80-658 93-692 (728)
13 KOG0058 Peptide exporter, ABC 100.0 7.8E-73 1.7E-77 668.7 57.2 538 77-650 124-678 (716)
14 TIGR00954 3a01203 Peroxysomal 100.0 6E-70 1.3E-74 687.9 73.8 562 85-654 76-658 (659)
15 KOG0060 Long-chain acyl-CoA tr 100.0 3.2E-69 7E-74 616.1 47.6 569 739-1337 62-651 (659)
16 COG2274 SunT ABC-type bacterio 100.0 6E-63 1.3E-67 612.6 63.5 528 88-650 142-683 (709)
17 KOG0055 Multidrug/pheromone ex 100.0 5.2E-63 1.1E-67 616.6 58.6 529 87-650 651-1200(1228)
18 TIGR00958 3a01208 Conjugate Tr 100.0 7.3E-62 1.6E-66 622.8 65.3 528 86-649 147-688 (711)
19 PRK11174 cysteine/glutathione 100.0 2E-61 4.4E-66 610.7 65.6 533 88-650 10-559 (588)
20 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.1E-60 8.9E-65 610.6 66.2 534 88-650 142-687 (710)
21 COG2274 SunT ABC-type bacterio 100.0 2.9E-61 6.4E-66 597.5 53.2 459 811-1328 211-684 (709)
22 COG1123 ATPase components of v 100.0 1.5E-62 3.3E-67 575.9 38.4 199 444-650 5-231 (539)
23 TIGR01193 bacteriocin_ABC ABC- 100.0 5.2E-60 1.1E-64 608.8 65.1 529 87-650 143-684 (708)
24 TIGR00954 3a01203 Peroxysomal 100.0 1.3E-59 2.9E-64 593.8 67.1 565 742-1333 79-659 (659)
25 TIGR02868 CydC thiol reductant 100.0 1.2E-59 2.6E-64 587.1 63.5 515 89-635 2-529 (529)
26 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.6E-59 3.4E-64 602.4 66.0 525 88-650 123-660 (686)
27 KOG0064 Peroxisomal long-chain 100.0 8.1E-61 1.8E-65 537.3 44.8 568 740-1337 99-693 (728)
28 TIGR03375 type_I_sec_LssB type 100.0 2.6E-59 5.6E-64 601.1 64.7 527 88-650 135-675 (694)
29 COG4178 ABC-type uncharacteriz 100.0 2.1E-59 4.5E-64 556.1 56.7 510 775-1333 63-594 (604)
30 PRK11176 lipid transporter ATP 100.0 1.4E-58 3.1E-63 584.5 65.3 531 85-650 10-554 (582)
31 PRK13549 xylose transporter AT 100.0 4.1E-61 8.8E-66 595.0 40.9 197 444-649 5-218 (506)
32 PRK11160 cysteine/glutathione 100.0 4.3E-58 9.2E-63 575.5 65.8 529 88-650 4-549 (574)
33 TIGR00958 3a01208 Conjugate Tr 100.0 2.3E-59 4.9E-64 599.8 55.2 455 820-1328 223-690 (711)
34 PRK11174 cysteine/glutathione 100.0 4.4E-59 9.5E-64 589.5 55.6 467 811-1328 76-560 (588)
35 PRK09700 D-allose transporter 100.0 1.8E-60 3.9E-65 590.4 41.6 197 444-649 5-220 (510)
36 COG1132 MdlB ABC-type multidru 100.0 5.2E-58 1.1E-62 576.2 63.7 512 107-650 16-539 (567)
37 TIGR02203 MsbA_lipidA lipid A 100.0 4.9E-58 1.1E-62 579.1 63.6 526 90-649 4-542 (571)
38 PRK10790 putative multidrug tr 100.0 6.9E-58 1.5E-62 578.5 64.8 530 84-650 7-550 (592)
39 PRK10261 glutathione transport 100.0 2E-60 4.3E-65 599.3 41.1 200 442-649 10-244 (623)
40 COG1132 MdlB ABC-type multidru 100.0 6.1E-59 1.3E-63 584.7 53.9 445 827-1328 81-540 (567)
41 PRK15134 microcin C ABC transp 100.0 2.3E-60 4.9E-65 591.6 39.6 198 444-649 5-232 (529)
42 PRK10762 D-ribose transporter 100.0 3.6E-60 7.7E-65 585.9 41.0 197 444-649 4-216 (501)
43 TIGR02857 CydD thiol reductant 100.0 1.5E-57 3.2E-62 568.3 64.8 510 107-647 5-529 (529)
44 TIGR03269 met_CoM_red_A2 methy 100.0 5.2E-60 1.1E-64 587.7 41.7 196 445-649 1-244 (520)
45 PRK13657 cyclic beta-1,2-gluca 100.0 1.3E-57 2.7E-62 575.2 63.8 529 86-650 5-545 (588)
46 TIGR02868 CydC thiol reductant 100.0 2.4E-58 5.2E-63 575.4 55.4 451 812-1312 67-529 (529)
47 PRK11288 araG L-arabinose tran 100.0 7.4E-60 1.6E-64 583.1 40.0 197 444-649 4-215 (501)
48 TIGR02633 xylG D-xylose ABC tr 100.0 1.6E-59 3.6E-64 580.9 41.4 196 445-649 2-216 (500)
49 TIGR01846 type_I_sec_HlyB type 100.0 3.3E-57 7.1E-62 581.1 64.0 526 88-650 127-667 (694)
50 PRK15064 ABC transporter ATP-b 100.0 1.8E-58 3.8E-63 574.7 50.6 191 445-649 2-227 (530)
51 TIGR01192 chvA glucan exporter 100.0 9.1E-57 2E-61 564.2 65.6 526 88-650 7-545 (585)
52 TIGR02204 MsbA_rel ABC transpo 100.0 8E-57 1.7E-61 568.3 64.1 530 88-650 6-550 (576)
53 PRK11819 putative ABC transpor 100.0 3.6E-58 7.8E-63 573.5 51.0 194 443-650 5-236 (556)
54 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.2E-57 2.7E-62 584.8 56.6 462 810-1328 188-661 (686)
55 COG4988 CydD ABC-type transpor 100.0 3.7E-56 8E-61 518.8 62.4 513 109-650 4-530 (559)
56 PRK15439 autoinducer 2 ABC tra 100.0 7.2E-59 1.6E-63 574.4 42.0 194 443-649 10-215 (510)
57 KOG0057 Mitochondrial Fe/S clu 100.0 9.7E-57 2.1E-61 513.3 54.8 534 85-650 10-561 (591)
58 KOG0057 Mitochondrial Fe/S clu 100.0 1.5E-57 3.2E-62 520.0 47.5 207 1097-1328 349-562 (591)
59 KOG0056 Heavy metal exporter H 100.0 4.6E-60 1E-64 525.1 26.1 259 1037-1327 483-748 (790)
60 PRK10982 galactose/methyl gala 100.0 6E-59 1.3E-63 574.1 38.8 194 447-649 1-209 (491)
61 PTZ00265 multidrug resistance 100.0 1.2E-56 2.6E-61 603.4 64.3 529 87-649 812-1433(1466)
62 TIGR01193 bacteriocin_ABC ABC- 100.0 3E-57 6.4E-62 583.3 55.7 463 813-1328 211-685 (708)
63 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 2.3E-57 4.9E-62 566.4 50.9 201 444-649 4-233 (552)
64 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 5.3E-57 1.2E-61 581.7 55.2 472 809-1328 205-688 (710)
65 PRK10938 putative molybdenum t 100.0 1.4E-58 3E-63 571.2 38.7 189 444-649 3-210 (490)
66 COG4987 CydC ABC-type transpor 100.0 3.6E-56 7.7E-61 508.7 55.2 527 91-650 4-548 (573)
67 PRK10789 putative multidrug tr 100.0 8.4E-56 1.8E-60 554.8 61.6 506 115-649 5-524 (569)
68 PRK11160 cysteine/glutathione 100.0 2.9E-56 6.2E-61 559.1 56.7 461 814-1328 76-550 (574)
69 PRK10636 putative ABC transpor 100.0 1.4E-56 3.1E-61 564.3 50.8 191 445-649 2-221 (638)
70 TIGR03375 type_I_sec_LssB type 100.0 5.3E-56 1.1E-60 570.5 56.0 462 812-1328 201-676 (694)
71 PRK11176 lipid transporter ATP 100.0 6.5E-56 1.4E-60 560.3 54.4 453 820-1328 87-555 (582)
72 TIGR01842 type_I_sec_PrtD type 100.0 9.8E-55 2.1E-59 543.4 63.9 506 107-650 8-529 (544)
73 COG4172 ABC-type uncharacteriz 100.0 1E-57 2.2E-62 499.9 31.6 199 443-649 5-233 (534)
74 TIGR02857 CydD thiol reductant 100.0 1.3E-55 2.8E-60 550.8 53.5 462 807-1324 53-529 (529)
75 TIGR00956 3a01205 Pleiotropic 100.0 2.6E-56 5.6E-61 600.2 49.6 207 1099-1327 759-979 (1394)
76 TIGR02203 MsbA_lipidA lipid A 100.0 2.4E-55 5.2E-60 554.7 55.1 467 808-1328 64-544 (571)
77 COG4988 CydD ABC-type transpor 100.0 1.1E-54 2.5E-59 506.4 54.3 476 800-1328 42-531 (559)
78 PRK11147 ABC transporter ATPas 100.0 2.1E-55 4.6E-60 555.6 51.4 189 1099-1325 319-511 (635)
79 PRK10790 putative multidrug tr 100.0 3.8E-55 8.3E-60 553.5 53.7 459 812-1328 79-551 (592)
80 COG4987 CydC ABC-type transpor 100.0 3.9E-55 8.5E-60 500.1 48.1 422 856-1327 113-548 (573)
81 PRK13657 cyclic beta-1,2-gluca 100.0 9.5E-55 2E-59 549.0 53.4 459 815-1328 73-546 (588)
82 KOG0056 Heavy metal exporter H 100.0 1.9E-56 4E-61 496.4 31.1 526 86-650 196-748 (790)
83 TIGR01257 rim_protein retinal- 100.0 2.5E-53 5.3E-58 566.3 66.6 199 443-649 927-1135(2272)
84 PLN03130 ABC transporter C fam 100.0 1.7E-53 3.7E-58 578.2 63.2 509 111-650 921-1448(1622)
85 TIGR01846 type_I_sec_HlyB type 100.0 7E-54 1.5E-58 550.3 54.9 463 811-1328 192-668 (694)
86 TIGR00957 MRP_assoc_pro multi 100.0 2E-53 4.2E-58 579.4 61.2 456 164-649 1025-1494(1522)
87 PLN03073 ABC transporter F fam 100.0 9.7E-55 2.1E-59 547.5 44.7 193 1098-1328 507-701 (718)
88 TIGR02204 MsbA_rel ABC transpo 100.0 1E-53 2.2E-58 540.1 53.6 459 816-1328 76-551 (576)
89 COG5265 ATM1 ABC-type transpor 100.0 2.7E-55 5.9E-60 485.2 33.2 258 1040-1328 210-474 (497)
90 TIGR01194 cyc_pep_trnsptr cycl 100.0 6.4E-53 1.4E-57 526.7 58.5 521 88-650 5-546 (555)
91 PTZ00243 ABC transporter; Prov 100.0 1.6E-52 3.6E-57 568.2 64.1 454 179-650 1029-1520(1560)
92 PLN03232 ABC transporter C fam 100.0 1.1E-52 2.4E-57 571.3 61.8 464 161-650 967-1445(1495)
93 TIGR01192 chvA glucan exporter 100.0 9.2E-53 2E-57 528.0 56.5 466 810-1328 68-546 (585)
94 PRK10789 putative multidrug tr 100.0 2.4E-53 5.2E-58 532.7 50.9 460 814-1328 52-526 (569)
95 PRK13409 putative ATPase RIL; 100.0 2.1E-54 4.6E-59 536.0 37.7 183 449-649 78-286 (590)
96 COG0488 Uup ATPase components 100.0 4.3E-53 9.2E-58 508.9 45.6 192 444-650 3-226 (530)
97 TIGR01842 type_I_sec_PrtD type 100.0 6.3E-52 1.4E-56 518.1 57.6 458 811-1328 59-530 (544)
98 PLN03140 ABC transporter G fam 100.0 2.8E-51 6E-56 548.3 58.7 207 1099-1326 867-1095(1470)
99 PRK10522 multidrug transporter 100.0 9.4E-51 2E-55 507.4 58.7 508 92-650 5-525 (547)
100 COG4618 ArpD ABC-type protease 100.0 2.6E-50 5.6E-55 455.6 51.6 503 107-650 25-547 (580)
101 TIGR01271 CFTR_protein cystic 100.0 3.1E-50 6.8E-55 546.2 62.1 461 166-650 943-1427(1490)
102 TIGR01194 cyc_pep_trnsptr cycl 100.0 9.1E-51 2E-55 507.4 51.8 260 1039-1328 277-547 (555)
103 KOG0054 Multidrug resistance-a 100.0 1.5E-49 3.3E-54 508.9 52.2 472 147-650 861-1349(1381)
104 COG5265 ATM1 ABC-type transpor 100.0 4.2E-49 9.1E-54 436.1 35.9 445 180-657 14-478 (497)
105 COG4618 ArpD ABC-type protease 100.0 1.4E-48 3.1E-53 441.5 40.5 338 945-1328 202-548 (580)
106 PRK10522 multidrug transporter 100.0 8.5E-48 1.8E-52 480.8 48.8 246 1042-1328 275-526 (547)
107 COG1129 MglA ABC-type sugar tr 100.0 1.6E-48 3.5E-53 455.2 36.9 199 443-650 7-221 (500)
108 COG3845 ABC-type uncharacteriz 100.0 5E-46 1.1E-50 423.3 34.6 198 444-650 4-216 (501)
109 COG1126 GlnQ ABC-type polar am 100.0 1.1E-44 2.4E-49 370.9 17.2 198 444-650 2-212 (240)
110 COG1116 TauB ABC-type nitrate/ 100.0 6.3E-43 1.4E-47 370.8 21.6 199 444-651 3-208 (248)
111 COG1135 AbcC ABC-type metal io 100.0 2.3E-43 5E-48 379.5 17.2 199 444-650 1-218 (339)
112 KOG0927 Predicted transporter 100.0 6E-41 1.3E-45 381.9 31.5 184 1098-1317 388-571 (614)
113 COG2884 FtsE Predicted ATPase 100.0 2.2E-42 4.8E-47 345.4 16.3 198 444-649 1-212 (223)
114 COG1136 SalX ABC-type antimicr 100.0 4.5E-42 9.8E-47 365.4 19.0 198 445-650 2-218 (226)
115 cd03289 ABCC_CFTR2 The CFTR su 100.0 6.6E-42 1.4E-46 386.3 18.7 206 1098-1327 1-212 (275)
116 COG1125 OpuBA ABC-type proline 100.0 5.5E-42 1.2E-46 357.1 15.5 197 444-649 1-211 (309)
117 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 9.9E-41 2.1E-45 359.9 22.2 198 443-649 3-214 (254)
118 COG1126 GlnQ ABC-type polar am 100.0 3.5E-41 7.6E-46 345.3 17.5 197 1099-1327 2-212 (240)
119 COG1120 FepC ABC-type cobalami 100.0 8.2E-41 1.8E-45 362.8 20.6 198 444-650 2-215 (258)
120 COG1135 AbcC ABC-type metal io 100.0 2.2E-41 4.9E-46 364.1 15.1 203 1100-1328 2-219 (339)
121 COG3638 ABC-type phosphate/pho 100.0 1.6E-40 3.4E-45 344.9 17.5 199 444-650 3-224 (258)
122 COG1117 PstB ABC-type phosphat 100.0 6.7E-41 1.5E-45 340.8 12.2 205 1098-1325 6-222 (253)
123 COG3839 MalK ABC-type sugar tr 100.0 4E-40 8.7E-45 371.1 19.4 197 444-649 3-209 (338)
124 PF06472 ABC_membrane_2: ABC t 100.0 5.1E-38 1.1E-42 357.4 36.2 276 84-359 6-281 (281)
125 COG1124 DppF ABC-type dipeptid 100.0 7.3E-40 1.6E-44 343.3 19.1 197 444-650 3-218 (252)
126 COG3842 PotA ABC-type spermidi 100.0 5.4E-40 1.2E-44 372.0 17.6 199 443-650 4-213 (352)
127 COG1117 PstB ABC-type phosphat 100.0 2.3E-40 5E-45 336.9 13.0 201 443-649 6-223 (253)
128 COG2884 FtsE Predicted ATPase 100.0 5.8E-40 1.3E-44 328.1 14.9 202 1100-1327 2-213 (223)
129 PRK14257 phosphate ABC transpo 100.0 1E-39 2.2E-44 378.2 18.8 211 1089-1328 73-301 (329)
130 KOG0062 ATPase component of AB 100.0 4.3E-38 9.2E-43 356.8 29.1 191 1098-1325 361-552 (582)
131 COG1127 Ttg2A ABC-type transpo 100.0 4.1E-39 8.9E-44 335.3 19.1 195 443-649 7-221 (263)
132 COG1122 CbiO ABC-type cobalt t 100.0 4.1E-39 8.9E-44 350.9 19.5 199 444-650 3-215 (235)
133 COG3840 ThiQ ABC-type thiamine 100.0 5.3E-39 1.2E-43 317.9 17.6 195 445-650 2-206 (231)
134 COG1136 SalX ABC-type antimicr 100.0 4.3E-39 9.2E-44 342.7 17.0 204 1100-1328 2-219 (226)
135 TIGR02314 ABC_MetN D-methionin 100.0 1.7E-38 3.8E-43 368.0 20.4 199 444-650 1-217 (343)
136 COG1118 CysA ABC-type sulfate/ 100.0 1.1E-38 2.4E-43 342.2 17.2 198 444-650 2-214 (345)
137 TIGR00960 3a0501s02 Type II (G 100.0 2E-38 4.4E-43 349.2 19.5 197 445-649 2-213 (216)
138 cd03289 ABCC_CFTR2 The CFTR su 100.0 7.2E-38 1.6E-42 353.5 22.6 199 444-650 2-212 (275)
139 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 5.3E-38 1.1E-42 346.6 19.6 198 445-650 1-216 (218)
140 PRK11650 ugpC glycerol-3-phosp 100.0 6.8E-38 1.5E-42 366.4 21.1 198 444-649 3-210 (356)
141 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 8.8E-38 1.9E-42 337.1 20.3 203 1099-1325 4-213 (254)
142 cd03226 ABC_cobalt_CbiO_domain 100.0 1E-37 2.2E-42 340.6 20.4 191 447-649 2-201 (205)
143 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.2E-37 2.7E-42 343.9 21.1 200 445-652 1-211 (220)
144 cd03223 ABCD_peroxisomal_ALDP 100.0 1.9E-37 4.1E-42 325.7 21.4 166 445-653 1-166 (166)
145 COG4181 Predicted ABC-type tra 100.0 1.2E-37 2.6E-42 304.9 17.6 199 444-650 6-222 (228)
146 PRK11432 fbpC ferric transport 100.0 1.8E-37 3.9E-42 361.7 20.8 199 443-650 5-213 (351)
147 COG1116 TauB ABC-type nitrate/ 100.0 1.7E-37 3.6E-42 329.5 18.6 200 1099-1328 3-208 (248)
148 cd03259 ABC_Carb_Solutes_like 100.0 1.6E-37 3.4E-42 341.4 18.8 197 445-650 1-207 (213)
149 TIGR02673 FtsE cell division A 100.0 2.2E-37 4.7E-42 340.7 19.7 197 445-649 2-212 (214)
150 cd03292 ABC_FtsE_transporter F 100.0 2.5E-37 5.5E-42 340.3 19.2 197 445-649 1-211 (214)
151 PRK13647 cbiO cobalt transport 100.0 2.7E-37 5.9E-42 351.4 19.9 199 444-650 4-214 (274)
152 cd03261 ABC_Org_Solvent_Resist 100.0 2.7E-37 5.9E-42 344.8 19.5 196 445-649 1-212 (235)
153 COG1124 DppF ABC-type dipeptid 100.0 2.6E-37 5.7E-42 324.1 17.8 202 1099-1328 3-219 (252)
154 cd03235 ABC_Metallic_Cations A 100.0 4.3E-37 9.4E-42 337.9 20.1 194 447-649 2-207 (213)
155 TIGR02211 LolD_lipo_ex lipopro 100.0 5.2E-37 1.1E-41 339.4 20.5 197 445-649 2-216 (221)
156 COG1120 FepC ABC-type cobalami 100.0 2.5E-37 5.4E-42 335.7 17.5 207 1099-1328 2-216 (258)
157 PRK11629 lolD lipoprotein tran 100.0 6.3E-37 1.4E-41 341.2 21.2 198 444-649 5-220 (233)
158 cd03225 ABC_cobalt_CbiO_domain 100.0 3E-37 6.5E-42 338.8 18.1 196 446-649 1-209 (211)
159 COG3839 MalK ABC-type sugar tr 100.0 2.4E-37 5.2E-42 348.7 17.6 202 1099-1327 3-210 (338)
160 TIGR03265 PhnT2 putative 2-ami 100.0 3.7E-37 8E-42 359.8 19.7 198 444-650 4-211 (353)
161 PRK14257 phosphate ABC transpo 100.0 6.5E-37 1.4E-41 354.7 21.5 206 441-650 77-300 (329)
162 PRK13631 cbiO cobalt transport 100.0 7.4E-37 1.6E-41 353.3 21.6 201 442-650 19-252 (320)
163 PRK13637 cbiO cobalt transport 100.0 6.3E-37 1.4E-41 350.5 20.3 197 445-649 3-220 (287)
164 PRK13650 cbiO cobalt transport 100.0 6.3E-37 1.4E-41 349.4 20.2 198 444-649 4-215 (279)
165 PRK11248 tauB taurine transpor 100.0 1.3E-36 2.9E-41 342.0 22.5 196 445-649 2-204 (255)
166 cd03296 ABC_CysA_sulfate_impor 100.0 9.4E-37 2E-41 341.2 21.2 198 444-650 2-213 (239)
167 cd03266 ABC_NatA_sodium_export 100.0 4.8E-37 1E-41 338.9 18.5 197 445-649 2-211 (218)
168 PRK10908 cell division protein 100.0 9.3E-37 2E-41 337.4 20.6 198 445-650 2-213 (222)
169 cd03301 ABC_MalK_N The N-termi 100.0 8.6E-37 1.9E-41 335.7 19.9 196 445-649 1-206 (213)
170 TIGR03258 PhnT 2-aminoethylpho 100.0 6.1E-37 1.3E-41 358.2 19.7 200 442-650 3-215 (362)
171 PRK11247 ssuB aliphatic sulfon 100.0 2.1E-36 4.6E-41 339.6 23.0 193 443-650 11-210 (257)
172 PRK09452 potA putrescine/sperm 100.0 1E-36 2.2E-41 357.5 21.3 199 443-650 13-221 (375)
173 cd03252 ABCC_Hemolysin The ABC 100.0 2.3E-36 4.9E-41 338.0 23.1 200 445-650 1-212 (237)
174 PRK11153 metN DL-methionine tr 100.0 9E-37 2E-41 356.8 20.6 199 444-650 1-217 (343)
175 TIGR02315 ABC_phnC phosphonate 100.0 1.4E-36 3E-41 341.1 21.2 197 445-649 2-221 (243)
176 cd03263 ABC_subfamily_A The AB 100.0 7.1E-37 1.5E-41 338.1 18.4 198 445-650 1-208 (220)
177 cd03244 ABCC_MRP_domain2 Domai 100.0 2.8E-36 6.1E-41 333.6 23.0 200 444-650 2-213 (221)
178 cd03250 ABCC_MRP_domain1 Domai 100.0 4.1E-36 8.8E-41 327.7 23.9 191 445-649 1-202 (204)
179 cd03254 ABCC_Glucan_exporter_l 100.0 2.4E-36 5.2E-41 336.1 22.4 201 444-650 2-213 (229)
180 PRK13651 cobalt transporter AT 100.0 1.2E-36 2.5E-41 349.7 20.3 197 445-649 3-240 (305)
181 cd03256 ABC_PhnC_transporter A 100.0 1.7E-36 3.8E-41 340.0 21.2 197 445-649 1-220 (241)
182 TIGR00960 3a0501s02 Type II (G 100.0 7.4E-37 1.6E-41 336.8 17.5 203 1100-1328 2-215 (216)
183 PRK10584 putative ABC transpor 100.0 2.2E-36 4.8E-41 335.9 21.4 199 443-649 5-221 (228)
184 PRK13643 cbiO cobalt transport 100.0 1.4E-36 2.9E-41 348.0 20.2 199 444-650 1-220 (288)
185 cd03244 ABCC_MRP_domain2 Domai 100.0 1.6E-36 3.5E-41 335.5 20.1 208 1098-1328 1-214 (221)
186 cd03269 ABC_putative_ATPase Th 100.0 1.4E-36 3.1E-41 333.0 19.4 197 445-650 1-204 (210)
187 TIGR02314 ABC_MetN D-methionin 100.0 8.4E-37 1.8E-41 354.0 18.4 203 1100-1328 2-218 (343)
188 PRK10851 sulfate/thiosulfate t 100.0 2E-36 4.4E-41 353.5 21.7 198 444-650 2-213 (353)
189 cd03268 ABC_BcrA_bacitracin_re 100.0 2.1E-36 4.5E-41 331.2 20.4 192 445-649 1-201 (208)
190 cd03265 ABC_DrrA DrrA is the A 100.0 1.2E-36 2.6E-41 336.0 18.5 197 445-650 1-208 (220)
191 PRK11000 maltose/maltodextrin 100.0 1.6E-36 3.5E-41 357.4 20.8 197 444-649 3-209 (369)
192 PRK13636 cbiO cobalt transport 100.0 1.9E-36 4.1E-41 346.1 20.4 200 443-650 4-218 (283)
193 cd03264 ABC_drug_resistance_li 100.0 1.4E-36 3.1E-41 333.3 18.3 195 445-649 1-204 (211)
194 COG1125 OpuBA ABC-type proline 100.0 5.7E-37 1.2E-41 319.7 14.3 198 1100-1327 2-212 (309)
195 cd03245 ABCC_bacteriocin_expor 100.0 5.4E-36 1.2E-40 331.0 23.0 201 444-650 2-214 (220)
196 cd03288 ABCC_SUR2 The SUR doma 100.0 2E-36 4.4E-41 341.7 20.0 210 1096-1328 16-231 (257)
197 PRK11607 potG putrescine trans 100.0 2.1E-36 4.6E-41 355.5 20.9 198 443-649 18-225 (377)
198 PRK13644 cbiO cobalt transport 100.0 2E-36 4.4E-41 344.3 20.0 198 445-650 2-211 (274)
199 PRK13635 cbiO cobalt transport 100.0 2.4E-36 5.1E-41 344.4 20.4 199 444-650 5-216 (279)
200 PRK13634 cbiO cobalt transport 100.0 1.7E-36 3.7E-41 347.5 19.3 197 445-649 3-221 (290)
201 cd03223 ABCD_peroxisomal_ALDP 100.0 2.8E-36 6.2E-41 316.7 19.4 166 1100-1331 1-166 (166)
202 cd03250 ABCC_MRP_domain1 Domai 100.0 3.9E-36 8.4E-41 327.9 21.0 195 1100-1328 1-204 (204)
203 PRK13537 nodulation ABC transp 100.0 2E-36 4.3E-41 348.7 19.5 199 443-650 6-214 (306)
204 cd03258 ABC_MetN_methionine_tr 100.0 2.3E-36 5.1E-41 336.9 19.4 197 445-649 2-216 (233)
205 cd03253 ABCC_ATM1_transporter 100.0 5.8E-36 1.2E-40 334.6 22.6 200 445-650 1-211 (236)
206 PRK13632 cbiO cobalt transport 100.0 2.5E-36 5.5E-41 343.4 20.0 200 443-650 6-218 (271)
207 PRK13646 cbiO cobalt transport 100.0 2.2E-36 4.7E-41 346.2 19.4 198 445-650 3-222 (286)
208 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.3E-36 9.3E-41 329.5 21.0 195 445-650 1-205 (211)
209 cd03252 ABCC_Hemolysin The ABC 100.0 2.3E-36 5.1E-41 337.8 19.2 207 1100-1328 1-213 (237)
210 TIGR01186 proV glycine betaine 100.0 1.4E-36 3E-41 353.8 17.9 186 456-649 4-205 (363)
211 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.9E-36 6.3E-41 336.5 19.8 196 445-649 2-207 (236)
212 cd03262 ABC_HisP_GlnQ_permease 100.0 2.8E-36 6.1E-41 331.7 19.3 196 445-649 1-210 (213)
213 PRK09536 btuD corrinoid ABC tr 100.0 4.2E-36 9.1E-41 353.9 21.9 198 444-650 3-215 (402)
214 cd03219 ABC_Mj1267_LivG_branch 100.0 2.3E-36 5.1E-41 337.7 18.7 196 445-649 1-218 (236)
215 PRK10247 putative ABC transpor 100.0 5.2E-36 1.1E-40 331.6 21.2 198 443-651 6-214 (225)
216 cd03260 ABC_PstB_phosphate_tra 100.0 3.4E-36 7.3E-41 334.3 19.7 199 445-650 1-216 (227)
217 cd03254 ABCC_Glucan_exporter_l 100.0 2.6E-36 5.6E-41 335.8 18.8 210 1098-1329 1-215 (229)
218 PRK14250 phosphate ABC transpo 100.0 6.9E-36 1.5E-40 334.2 22.2 194 444-650 3-208 (241)
219 COG1131 CcmA ABC-type multidru 100.0 2.3E-36 4.9E-41 344.5 18.5 199 444-650 4-213 (293)
220 PRK13631 cbiO cobalt transport 100.0 3E-36 6.6E-41 348.2 19.3 202 1098-1328 20-253 (320)
221 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.7E-36 5.8E-41 333.0 18.0 203 1100-1328 1-217 (218)
222 cd03245 ABCC_bacteriocin_expor 100.0 3.3E-36 7.1E-41 332.8 18.6 209 1098-1328 1-215 (220)
223 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3.8E-36 8.2E-41 336.9 19.3 198 445-650 1-212 (242)
224 PRK13652 cbiO cobalt transport 100.0 4.9E-36 1.1E-40 341.9 20.2 199 444-650 3-214 (277)
225 cd03259 ABC_Carb_Solutes_like 100.0 3.4E-36 7.3E-41 330.8 18.1 202 1100-1328 1-208 (213)
226 cd03257 ABC_NikE_OppD_transpor 100.0 7.2E-36 1.6E-40 332.2 20.5 197 445-649 2-221 (228)
227 COG3638 ABC-type phosphate/pho 100.0 2.8E-36 6.1E-41 313.3 15.9 211 1099-1328 3-225 (258)
228 cd03218 ABC_YhbG The ABC trans 100.0 4.5E-36 9.8E-41 334.5 18.8 197 445-650 1-209 (232)
229 cd03226 ABC_cobalt_CbiO_domain 100.0 2.7E-36 5.8E-41 329.5 16.3 196 1101-1327 1-202 (205)
230 PRK13633 cobalt transporter AT 100.0 7.3E-36 1.6E-40 341.1 20.6 200 443-650 3-220 (280)
231 COG1122 CbiO ABC-type cobalt t 100.0 4.2E-36 9.2E-41 327.3 17.5 201 1099-1328 3-216 (235)
232 cd03292 ABC_FtsE_transporter F 100.0 4.6E-36 1E-40 330.2 18.0 203 1100-1328 1-213 (214)
233 TIGR01288 nodI ATP-binding ABC 100.0 5.5E-36 1.2E-40 345.8 19.5 197 444-649 4-210 (303)
234 cd03251 ABCC_MsbA MsbA is an e 100.0 1.6E-35 3.4E-40 330.6 22.5 200 445-650 1-212 (234)
235 TIGR02673 FtsE cell division A 100.0 4.9E-36 1.1E-40 329.9 18.1 203 1100-1328 2-214 (214)
236 cd03253 ABCC_ATM1_transporter 100.0 5.9E-36 1.3E-40 334.5 19.0 207 1100-1328 1-212 (236)
237 TIGR03608 L_ocin_972_ABC putat 100.0 4E-36 8.6E-41 328.7 17.2 192 447-647 1-206 (206)
238 COG4619 ABC-type uncharacteriz 100.0 1.9E-36 4E-41 295.6 12.9 185 456-649 14-209 (223)
239 cd03290 ABCC_SUR1_N The SUR do 100.0 2.6E-35 5.7E-40 324.9 23.8 197 446-649 2-216 (218)
240 cd03288 ABCC_SUR2 The SUR doma 100.0 2.1E-35 4.6E-40 333.4 23.2 201 442-649 17-229 (257)
241 cd03248 ABCC_TAP TAP, the Tran 100.0 2.2E-35 4.7E-40 327.5 22.7 203 442-650 9-224 (226)
242 TIGR01277 thiQ thiamine ABC tr 100.0 1.5E-35 3.2E-40 325.4 21.1 194 445-649 1-204 (213)
243 PRK13639 cbiO cobalt transport 100.0 8.6E-36 1.9E-40 339.6 19.7 197 445-649 2-212 (275)
244 PRK13641 cbiO cobalt transport 100.0 7.7E-36 1.7E-40 341.8 19.3 198 444-649 2-220 (287)
245 PRK13640 cbiO cobalt transport 100.0 9.4E-36 2E-40 340.3 19.9 200 443-650 4-219 (282)
246 cd03224 ABC_TM1139_LivF_branch 100.0 9.9E-36 2.1E-40 329.6 19.4 194 445-649 1-207 (222)
247 TIGR00972 3a0107s01c2 phosphat 100.0 1.4E-35 3E-40 333.5 20.6 197 445-650 2-219 (247)
248 PRK11831 putative ABC transpor 100.0 1E-35 2.2E-40 338.1 19.7 198 443-649 6-219 (269)
249 COG4555 NatA ABC-type Na+ tran 100.0 1.5E-36 3.3E-41 305.9 11.4 198 444-649 1-208 (245)
250 PRK13645 cbiO cobalt transport 100.0 9.1E-36 2E-40 342.1 19.5 200 443-650 5-227 (289)
251 PRK13536 nodulation factor exp 100.0 9.2E-36 2E-40 346.2 19.7 199 443-650 40-248 (340)
252 PRK11650 ugpC glycerol-3-phosp 100.0 7.4E-36 1.6E-40 349.2 19.0 204 1099-1328 3-212 (356)
253 PRK13638 cbiO cobalt transport 100.0 8.7E-36 1.9E-40 339.3 19.1 198 444-650 1-212 (271)
254 PRK13649 cbiO cobalt transport 100.0 9.3E-36 2E-40 340.9 19.4 198 445-650 3-221 (280)
255 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.1E-35 4.6E-40 330.3 21.7 200 445-650 1-213 (238)
256 cd03369 ABCC_NFT1 Domain 2 of 100.0 2.8E-35 6E-40 321.9 22.0 186 442-649 4-198 (207)
257 PRK13548 hmuV hemin importer A 100.0 2.4E-35 5.2E-40 332.9 22.2 197 444-649 2-216 (258)
258 TIGR02315 ABC_phnC phosphonate 100.0 1E-35 2.3E-40 334.0 19.2 211 1100-1328 2-223 (243)
259 cd03261 ABC_Org_Solvent_Resist 100.0 7E-36 1.5E-40 333.4 17.6 203 1100-1328 1-214 (235)
260 cd03290 ABCC_SUR1_N The SUR do 100.0 2E-35 4.4E-40 325.8 20.9 204 1101-1327 2-217 (218)
261 PRK13648 cbiO cobalt transport 100.0 1.3E-35 2.8E-40 337.5 19.9 199 443-649 6-217 (269)
262 cd03294 ABC_Pro_Gly_Bertaine T 100.0 8.2E-36 1.8E-40 338.6 18.0 195 446-649 26-236 (269)
263 cd03248 ABCC_TAP TAP, the Tran 100.0 1.4E-35 3E-40 329.1 19.3 207 1097-1327 9-224 (226)
264 COG4615 PvdE ABC-type sideroph 100.0 9.2E-33 2E-37 302.5 40.7 442 165-650 69-524 (546)
265 PRK10575 iron-hydroxamate tran 100.0 2.8E-35 6.1E-40 333.9 22.1 199 443-650 10-224 (265)
266 PRK11629 lolD lipoprotein tran 100.0 1.2E-35 2.7E-40 330.8 18.8 204 1099-1328 5-222 (233)
267 COG3842 PotA ABC-type spermidi 100.0 6.6E-36 1.4E-40 338.8 16.7 205 1098-1328 4-214 (352)
268 PRK13642 cbiO cobalt transport 100.0 1.6E-35 3.5E-40 337.7 20.0 199 444-650 4-216 (277)
269 PRK09493 glnQ glutamine ABC tr 100.0 1.8E-35 3.9E-40 331.1 19.9 196 445-649 2-211 (240)
270 TIGR02982 heterocyst_DevA ABC 100.0 1.6E-35 3.5E-40 326.9 19.2 197 445-649 2-216 (220)
271 cd03296 ABC_CysA_sulfate_impor 100.0 1.7E-35 3.7E-40 331.0 19.3 206 1100-1328 3-214 (239)
272 TIGR02211 LolD_lipo_ex lipopro 100.0 1.9E-35 4.1E-40 327.0 19.4 202 1100-1327 2-217 (221)
273 TIGR03411 urea_trans_UrtD urea 100.0 3.2E-35 6.9E-40 329.8 21.3 198 444-650 2-218 (242)
274 COG3840 ThiQ ABC-type thiamine 100.0 9.5E-36 2.1E-40 294.9 14.9 204 1100-1332 2-211 (231)
275 cd03266 ABC_NatA_sodium_export 100.0 1.4E-35 3.1E-40 327.2 18.1 203 1100-1328 2-213 (218)
276 cd03256 ABC_PhnC_transporter A 100.0 1.5E-35 3.3E-40 332.3 18.6 211 1100-1328 1-222 (241)
277 PRK10744 pstB phosphate transp 100.0 3.1E-35 6.8E-40 332.8 21.2 199 442-649 11-230 (260)
278 PRK10771 thiQ thiamine transpo 100.0 5E-35 1.1E-39 325.7 22.4 194 445-649 2-205 (232)
279 PRK11124 artP arginine transpo 100.0 2.4E-35 5.2E-40 330.6 19.9 197 444-649 2-216 (242)
280 PRK13647 cbiO cobalt transport 100.0 1.5E-35 3.2E-40 337.3 18.4 204 1099-1328 4-215 (274)
281 PRK11264 putative amino-acid A 100.0 1.8E-35 4E-40 333.4 19.0 198 444-650 3-220 (250)
282 PRK11432 fbpC ferric transport 100.0 1.3E-35 2.8E-40 346.1 18.1 204 1098-1328 5-214 (351)
283 COG4525 TauB ABC-type taurine 100.0 1.3E-35 2.8E-40 296.7 15.5 205 444-656 3-215 (259)
284 PRK15079 oligopeptide ABC tran 100.0 2.2E-35 4.7E-40 342.3 19.9 199 443-649 7-237 (331)
285 PRK10070 glycine betaine trans 100.0 2.6E-35 5.7E-40 346.9 20.8 185 458-650 41-241 (400)
286 cd03268 ABC_BcrA_bacitracin_re 100.0 1.3E-35 2.9E-40 324.8 17.1 198 1100-1328 1-203 (208)
287 PRK14273 phosphate ABC transpo 100.0 2.9E-35 6.3E-40 332.3 20.2 199 443-650 6-225 (254)
288 TIGR03522 GldA_ABC_ATP gliding 100.0 1.9E-35 4.1E-40 340.7 19.0 197 445-650 3-208 (301)
289 PRK13650 cbiO cobalt transport 100.0 1.6E-35 3.6E-40 337.7 18.3 204 1099-1328 4-217 (279)
290 PRK10619 histidine/lysine/argi 100.0 3.1E-35 6.7E-40 332.5 20.3 199 443-650 4-228 (257)
291 cd03235 ABC_Metallic_Cations A 100.0 1.6E-35 3.5E-40 325.5 17.4 200 1101-1326 1-207 (213)
292 TIGR03005 ectoine_ehuA ectoine 100.0 2.8E-35 6.1E-40 331.9 19.7 197 445-650 1-223 (252)
293 PRK14242 phosphate transporter 100.0 2.9E-35 6.2E-40 332.3 19.7 203 443-650 5-224 (253)
294 cd03263 ABC_subfamily_A The AB 100.0 1.7E-35 3.6E-40 327.1 17.5 203 1100-1328 1-209 (220)
295 PRK13637 cbiO cobalt transport 100.0 2.1E-35 4.6E-40 337.9 18.9 203 1100-1328 3-222 (287)
296 cd03301 ABC_MalK_N The N-termi 100.0 2.4E-35 5.1E-40 324.3 18.4 202 1100-1328 1-208 (213)
297 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.4E-35 5.3E-40 325.6 18.6 201 1100-1329 1-210 (220)
298 PRK11231 fecE iron-dicitrate t 100.0 5.1E-35 1.1E-39 330.3 21.5 198 444-650 2-214 (255)
299 TIGR02769 nickel_nikE nickel i 100.0 3.4E-35 7.5E-40 333.2 19.9 198 444-649 2-226 (265)
300 PRK14269 phosphate ABC transpo 100.0 4E-35 8.7E-40 329.3 20.2 201 444-649 2-216 (246)
301 cd03369 ABCC_NFT1 Domain 2 of 100.0 3.8E-35 8.2E-40 320.9 19.5 195 1091-1328 1-200 (207)
302 cd03251 ABCC_MsbA MsbA is an e 100.0 3.2E-35 6.9E-40 328.1 19.1 207 1100-1328 1-213 (234)
303 PRK14268 phosphate ABC transpo 100.0 3.7E-35 8E-40 331.8 19.5 199 442-649 10-228 (258)
304 KOG0065 Pleiotropic drug resis 100.0 1.7E-33 3.7E-38 351.5 36.1 189 458-649 128-337 (1391)
305 cd03225 ABC_cobalt_CbiO_domain 100.0 2.2E-35 4.8E-40 324.0 17.0 202 1101-1328 1-211 (211)
306 PRK10908 cell division protein 100.0 3.7E-35 8E-40 324.6 18.8 202 1100-1327 2-213 (222)
307 cd03231 ABC_CcmA_heme_exporter 100.0 8.3E-35 1.8E-39 316.2 21.1 188 445-647 1-198 (201)
308 PRK14235 phosphate transporter 100.0 6.2E-35 1.3E-39 331.3 21.0 199 442-649 17-237 (267)
309 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3.3E-35 7.1E-40 328.8 18.4 207 1100-1328 1-214 (238)
310 TIGR03410 urea_trans_UrtE urea 100.0 4.1E-35 8.8E-40 326.3 18.8 194 445-650 1-208 (230)
311 COG1127 Ttg2A ABC-type transpo 100.0 2.9E-35 6.3E-40 306.6 16.3 208 1098-1332 7-227 (263)
312 cd03246 ABCC_Protease_Secretio 100.0 6.5E-35 1.4E-39 309.1 19.4 160 445-649 1-170 (173)
313 PRK13538 cytochrome c biogenes 100.0 6.9E-35 1.5E-39 317.8 20.0 191 445-647 2-202 (204)
314 PRK11300 livG leucine/isoleuci 100.0 7.4E-35 1.6E-39 329.5 21.0 198 444-650 5-230 (255)
315 TIGR00968 3a0106s01 sulfate AB 100.0 6.1E-35 1.3E-39 325.7 20.0 197 445-650 1-207 (237)
316 cd03260 ABC_PstB_phosphate_tra 100.0 2.6E-35 5.6E-40 327.2 16.9 205 1100-1328 1-217 (227)
317 PRK10895 lipopolysaccharide AB 100.0 6.4E-35 1.4E-39 326.9 20.2 198 444-650 3-213 (241)
318 cd03264 ABC_drug_resistance_li 100.0 3.7E-35 7.9E-40 322.1 17.8 201 1100-1328 1-206 (211)
319 PRK10253 iron-enterobactin tra 100.0 8.8E-35 1.9E-39 329.9 21.4 199 443-650 6-220 (265)
320 cd03219 ABC_Mj1267_LivG_branch 100.0 2.5E-35 5.5E-40 329.4 16.6 212 1100-1328 1-220 (236)
321 PRK14250 phosphate ABC transpo 100.0 4E-35 8.8E-40 328.0 18.1 199 1099-1328 3-209 (241)
322 cd03247 ABCC_cytochrome_bd The 100.0 7E-35 1.5E-39 310.6 19.0 163 445-649 1-171 (178)
323 TIGR03873 F420-0_ABC_ATP propo 100.0 9.1E-35 2E-39 328.5 21.0 197 445-650 2-213 (256)
324 PRK14259 phosphate ABC transpo 100.0 1E-34 2.2E-39 329.6 21.4 198 442-649 11-228 (269)
325 cd03234 ABCG_White The White s 100.0 7.1E-35 1.5E-39 323.1 19.4 198 444-649 3-219 (226)
326 PRK13540 cytochrome c biogenes 100.0 9.2E-35 2E-39 315.8 19.9 188 445-646 2-198 (200)
327 cd03262 ABC_HisP_GlnQ_permease 100.0 6.4E-35 1.4E-39 320.9 18.8 203 1100-1328 1-212 (213)
328 cd03300 ABC_PotA_N PotA is an 100.0 6.3E-35 1.4E-39 324.8 18.9 197 445-650 1-207 (232)
329 PRK13646 cbiO cobalt transport 100.0 3.5E-35 7.6E-40 336.2 17.2 205 1099-1329 2-224 (286)
330 PRK14247 phosphate ABC transpo 100.0 7.9E-35 1.7E-39 328.1 19.8 197 444-649 3-220 (250)
331 cd03298 ABC_ThiQ_thiamine_tran 100.0 7.4E-35 1.6E-39 319.7 19.0 200 1100-1328 1-206 (211)
332 PRK11308 dppF dipeptide transp 100.0 8.5E-35 1.8E-39 337.2 20.4 199 443-649 4-230 (327)
333 PRK13636 cbiO cobalt transport 100.0 5.4E-35 1.2E-39 334.2 18.4 204 1099-1328 5-219 (283)
334 TIGR03740 galliderm_ABC gallid 100.0 1.1E-34 2.5E-39 320.9 20.4 192 445-649 1-199 (223)
335 TIGR03265 PhnT2 putative 2-ami 100.0 4.6E-35 9.9E-40 342.2 18.1 203 1099-1328 4-212 (353)
336 PRK11247 ssuB aliphatic sulfon 100.0 7.9E-35 1.7E-39 326.9 19.1 194 1099-1328 12-211 (257)
337 TIGR01188 drrA daunorubicin re 100.0 3.6E-35 7.8E-40 338.9 16.7 185 457-649 5-199 (302)
338 PRK11614 livF leucine/isoleuci 100.0 1.1E-34 2.4E-39 324.2 20.2 196 444-650 5-213 (237)
339 PRK11153 metN DL-methionine tr 100.0 5E-35 1.1E-39 342.1 18.1 203 1100-1328 2-218 (343)
340 PRK13632 cbiO cobalt transport 100.0 8.1E-35 1.8E-39 331.1 19.3 204 1099-1328 7-219 (271)
341 PRK10851 sulfate/thiosulfate t 100.0 7.3E-35 1.6E-39 340.5 19.3 207 1099-1328 2-214 (353)
342 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 8.8E-35 1.9E-39 324.6 19.0 202 1100-1328 2-209 (236)
343 COG4559 ABC-type hemin transpo 100.0 8.5E-35 1.9E-39 295.6 17.0 197 444-649 1-216 (259)
344 cd03269 ABC_putative_ATPase Th 100.0 7.4E-35 1.6E-39 319.4 18.0 200 1100-1328 1-205 (210)
345 PRK14237 phosphate transporter 100.0 1.4E-34 3.1E-39 328.3 20.8 204 442-650 18-238 (267)
346 PRK09544 znuC high-affinity zi 100.0 3.2E-34 6.9E-39 321.4 23.2 185 444-649 4-196 (251)
347 PRK15112 antimicrobial peptide 100.0 1.1E-34 2.4E-39 329.2 19.5 198 444-649 4-225 (267)
348 PRK14251 phosphate ABC transpo 100.0 1.4E-34 3.1E-39 326.2 20.1 198 444-650 4-222 (251)
349 cd03258 ABC_MetN_methionine_tr 100.0 7.9E-35 1.7E-39 324.6 17.8 203 1100-1328 2-218 (233)
350 PRK13543 cytochrome c biogenes 100.0 1.9E-34 4.1E-39 316.6 20.5 195 443-649 10-212 (214)
351 PRK13643 cbiO cobalt transport 100.0 7.5E-35 1.6E-39 333.6 17.9 204 1100-1329 2-222 (288)
352 PRK11248 tauB taurine transpor 100.0 1.5E-34 3.2E-39 325.5 20.0 201 1100-1330 2-208 (255)
353 cd03291 ABCC_CFTR1 The CFTR su 100.0 9E-34 1.9E-38 321.4 26.5 192 442-650 37-234 (282)
354 PRK13539 cytochrome c biogenes 100.0 2.1E-34 4.6E-39 314.5 20.5 192 444-649 2-200 (207)
355 TIGR01978 sufC FeS assembly AT 100.0 1.2E-34 2.7E-39 325.4 19.1 197 445-649 1-220 (243)
356 cd03218 ABC_YhbG The ABC trans 100.0 6.1E-35 1.3E-39 325.4 16.4 202 1100-1328 1-210 (232)
357 TIGR01166 cbiO cobalt transpor 100.0 5.3E-35 1.1E-39 315.2 15.3 175 455-637 2-189 (190)
358 PRK15056 manganese/iron transp 100.0 3.1E-34 6.7E-39 326.5 22.5 196 444-647 6-215 (272)
359 PRK14248 phosphate ABC transpo 100.0 2.1E-34 4.5E-39 327.6 21.0 198 443-649 20-238 (268)
360 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.1E-34 2.3E-39 325.2 18.4 203 1100-1328 1-213 (242)
361 PRK14269 phosphate ABC transpo 100.0 1.1E-34 2.4E-39 325.8 18.4 209 1099-1328 2-218 (246)
362 cd03224 ABC_TM1139_LivF_branch 100.0 6.6E-35 1.4E-39 323.0 16.2 200 1100-1328 1-209 (222)
363 cd03299 ABC_ModC_like Archeal 100.0 1.7E-34 3.8E-39 321.7 19.5 195 445-649 1-205 (235)
364 PRK14267 phosphate ABC transpo 100.0 1.8E-34 3.8E-39 325.9 19.7 198 444-650 4-224 (253)
365 PRK11000 maltose/maltodextrin 100.0 1.1E-34 2.4E-39 341.8 18.8 203 1099-1328 3-211 (369)
366 PRK10584 putative ABC transpor 100.0 1.8E-34 4E-39 320.6 19.3 203 1099-1327 6-222 (228)
367 cd03257 ABC_NikE_OppD_transpor 100.0 1.1E-34 2.4E-39 322.7 17.4 200 1100-1328 2-223 (228)
368 cd03247 ABCC_cytochrome_bd The 100.0 7E-35 1.5E-39 310.6 15.2 169 1100-1328 1-173 (178)
369 cd03246 ABCC_Protease_Secretio 100.0 1.2E-34 2.5E-39 307.2 16.8 166 1100-1328 1-172 (173)
370 PRK09452 potA putrescine/sperm 100.0 1.2E-34 2.5E-39 340.1 18.5 203 1099-1328 14-222 (375)
371 PRK14240 phosphate transporter 100.0 2.8E-34 6E-39 323.7 20.8 199 443-650 2-221 (250)
372 PRK13547 hmuV hemin importer A 100.0 2.9E-34 6.3E-39 325.1 21.0 196 445-649 2-230 (272)
373 TIGR03258 PhnT 2-aminoethylpho 100.0 1.2E-34 2.7E-39 338.8 18.5 204 1098-1328 4-216 (362)
374 TIGR03005 ectoine_ehuA ectoine 100.0 1.3E-34 2.9E-39 326.5 18.2 203 1100-1328 1-224 (252)
375 PRK13634 cbiO cobalt transport 100.0 8.9E-35 1.9E-39 333.3 17.0 203 1100-1328 3-223 (290)
376 PRK14256 phosphate ABC transpo 100.0 3E-34 6.5E-39 323.6 21.0 202 443-649 3-222 (252)
377 PRK09984 phosphonate/organopho 100.0 3.7E-34 8E-39 324.6 21.8 198 444-650 4-229 (262)
378 PRK13644 cbiO cobalt transport 100.0 1.5E-34 3.3E-39 328.9 18.6 203 1100-1328 2-212 (274)
379 PRK14239 phosphate transporter 100.0 2.9E-34 6.4E-39 324.0 20.8 198 444-650 5-223 (252)
380 PRK14245 phosphate ABC transpo 100.0 2.7E-34 5.9E-39 323.6 20.5 201 444-649 3-220 (250)
381 PRK14274 phosphate ABC transpo 100.0 2.6E-34 5.6E-39 325.4 20.3 202 443-649 11-229 (259)
382 PRK14254 phosphate ABC transpo 100.0 4.6E-34 1E-38 326.3 22.6 198 442-649 37-255 (285)
383 cd03265 ABC_DrrA DrrA is the A 100.0 1.6E-34 3.5E-39 319.1 18.2 202 1100-1328 1-209 (220)
384 PRK14270 phosphate ABC transpo 100.0 2.8E-34 6E-39 323.7 20.5 198 444-650 4-222 (251)
385 PRK13635 cbiO cobalt transport 100.0 1.6E-34 3.5E-39 329.3 18.6 204 1099-1328 5-217 (279)
386 PRK13651 cobalt transporter AT 100.0 1.4E-34 3E-39 332.5 18.1 203 1100-1328 3-242 (305)
387 PRK09536 btuD corrinoid ABC tr 100.0 1.6E-34 3.5E-39 340.5 19.0 207 1099-1328 3-216 (402)
388 TIGR00972 3a0107s01c2 phosphat 100.0 1.7E-34 3.6E-39 324.7 18.2 207 1100-1328 2-220 (247)
389 PRK10744 pstB phosphate transp 100.0 2.4E-34 5.2E-39 325.6 19.5 210 1097-1328 11-232 (260)
390 PRK11022 dppD dipeptide transp 100.0 2.1E-34 4.6E-39 334.1 19.5 198 444-649 3-229 (326)
391 cd03230 ABC_DR_subfamily_A Thi 100.0 4.2E-34 9.1E-39 302.9 20.1 161 445-650 1-171 (173)
392 PRK11607 potG putrescine trans 100.0 1.5E-34 3.3E-39 339.8 18.5 204 1098-1328 18-227 (377)
393 PRK11144 modC molybdate transp 100.0 3.6E-34 7.9E-39 336.1 21.6 188 445-650 2-205 (352)
394 TIGR03415 ABC_choXWV_ATP choli 100.0 1.9E-34 4.1E-39 337.1 19.0 186 457-650 36-241 (382)
395 PRK14241 phosphate transporter 100.0 3.6E-34 7.7E-39 324.0 20.6 197 444-649 4-222 (258)
396 PRK14244 phosphate ABC transpo 100.0 3.1E-34 6.6E-39 323.3 19.9 197 445-650 6-224 (251)
397 TIGR02324 CP_lyasePhnL phospho 100.0 4.1E-34 8.9E-39 316.8 20.6 196 445-648 2-223 (224)
398 TIGR03411 urea_trans_UrtD urea 100.0 2.4E-34 5.2E-39 322.6 18.9 212 1099-1329 2-220 (242)
399 KOG0066 eIF2-interacting prote 100.0 1.2E-32 2.6E-37 302.8 31.6 188 1098-1325 585-774 (807)
400 TIGR02982 heterocyst_DevA ABC 100.0 1.4E-34 3E-39 319.4 16.7 204 1100-1328 2-218 (220)
401 TIGR01189 ccmA heme ABC export 100.0 3.2E-34 7E-39 311.1 19.1 187 445-645 1-196 (198)
402 PRK14249 phosphate ABC transpo 100.0 5.3E-34 1.2E-38 321.4 21.6 202 444-650 4-222 (251)
403 PRK13652 cbiO cobalt transport 100.0 2.4E-34 5.1E-39 328.1 18.9 205 1099-1329 3-216 (277)
404 PRK14273 phosphate ABC transpo 100.0 2.4E-34 5.2E-39 324.8 18.5 209 1098-1328 6-226 (254)
405 PRK14238 phosphate transporter 100.0 3.5E-34 7.7E-39 325.6 19.9 199 443-650 23-242 (271)
406 PRK10619 histidine/lysine/argi 100.0 2.7E-34 5.9E-39 324.7 18.6 208 1097-1330 3-231 (257)
407 PRK11701 phnK phosphonate C-P 100.0 5.8E-34 1.2E-38 322.3 21.1 198 443-649 5-227 (258)
408 PRK10247 putative ABC transpor 100.0 2.3E-34 5E-39 318.5 17.4 202 1099-1329 7-215 (225)
409 PRK11264 putative amino-acid A 100.0 2.7E-34 6E-39 323.8 18.4 204 1099-1328 3-221 (250)
410 cd03297 ABC_ModC_molybdenum_tr 100.0 3.7E-34 7.9E-39 314.8 18.9 189 446-649 3-207 (214)
411 TIGR01277 thiQ thiamine ABC tr 100.0 2.6E-34 5.7E-39 315.6 17.7 200 1100-1328 1-206 (213)
412 PRK13649 cbiO cobalt transport 100.0 2.1E-34 4.6E-39 329.7 17.6 203 1100-1328 3-222 (280)
413 PRK13645 cbiO cobalt transport 100.0 2.8E-34 6E-39 329.8 18.3 206 1097-1328 4-228 (289)
414 PRK11124 artP arginine transpo 100.0 2.8E-34 6.1E-39 322.0 17.9 204 1100-1329 3-219 (242)
415 PRK13537 nodulation ABC transp 100.0 3.1E-34 6.6E-39 330.5 18.5 204 1098-1328 6-215 (306)
416 TIGR00968 3a0106s01 sulfate AB 100.0 3.9E-34 8.5E-39 319.3 18.7 203 1100-1329 1-209 (237)
417 cd03231 ABC_CcmA_heme_exporter 100.0 4.5E-34 9.8E-39 310.4 18.7 192 1100-1324 1-198 (201)
418 PRK14253 phosphate ABC transpo 100.0 5.9E-34 1.3E-38 320.8 20.2 198 444-650 3-220 (249)
419 TIGR03608 L_ocin_972_ABC putat 100.0 2.4E-34 5.2E-39 314.6 16.6 196 1102-1324 1-206 (206)
420 PRK14275 phosphate ABC transpo 100.0 5.4E-34 1.2E-38 326.2 20.2 198 443-649 38-256 (286)
421 cd03228 ABCC_MRP_Like The MRP 100.0 5.7E-34 1.2E-38 301.3 18.8 160 445-649 1-169 (171)
422 TIGR02142 modC_ABC molybdenum 100.0 6E-34 1.3E-38 334.9 21.0 189 449-650 4-208 (354)
423 PRK14242 phosphate transporter 100.0 2.8E-34 6.2E-39 324.2 17.4 208 1099-1328 6-225 (253)
424 cd03229 ABC_Class3 This class 100.0 8.8E-34 1.9E-38 302.0 20.2 162 445-649 1-176 (178)
425 PRK09493 glnQ glutamine ABC tr 100.0 3.5E-34 7.7E-39 320.7 18.0 203 1100-1328 2-213 (240)
426 PRK14236 phosphate transporter 100.0 8.2E-34 1.8E-38 323.0 21.2 204 442-650 23-243 (272)
427 PRK13633 cobalt transporter AT 100.0 4.1E-34 9E-39 326.6 18.8 204 1099-1328 4-221 (280)
428 PRK14262 phosphate ABC transpo 100.0 7.4E-34 1.6E-38 320.2 20.6 202 444-650 3-221 (250)
429 COG1123 ATPase components of v 100.0 6.1E-34 1.3E-38 335.1 20.6 201 442-650 278-506 (539)
430 PRK14255 phosphate ABC transpo 100.0 6.8E-34 1.5E-38 320.9 20.1 199 443-650 4-223 (252)
431 PRK10575 iron-hydroxamate tran 100.0 4.7E-34 1E-38 323.9 18.8 207 1099-1328 11-225 (265)
432 TIGR01288 nodI ATP-binding ABC 100.0 4.5E-34 9.8E-39 329.9 19.0 203 1099-1328 4-212 (303)
433 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.7E-34 5.9E-39 326.1 16.9 201 1101-1328 26-238 (269)
434 TIGR03410 urea_trans_UrtE urea 100.0 2.2E-34 4.7E-39 320.4 15.7 199 1100-1328 1-209 (230)
435 PRK14235 phosphate transporter 100.0 3.4E-34 7.5E-39 325.2 17.7 211 1097-1328 17-239 (267)
436 cd03230 ABC_DR_subfamily_A Thi 100.0 4.4E-34 9.6E-39 302.8 17.3 166 1100-1328 1-172 (173)
437 cd03300 ABC_PotA_N PotA is an 100.0 3.8E-34 8.3E-39 318.4 17.6 202 1100-1328 1-208 (232)
438 PRK10419 nikE nickel transport 100.0 6.2E-34 1.3E-38 323.1 19.5 198 444-649 3-227 (268)
439 PRK14260 phosphate ABC transpo 100.0 8.5E-34 1.8E-38 320.9 20.5 202 443-649 6-224 (259)
440 PRK13642 cbiO cobalt transport 100.0 4.8E-34 1E-38 325.6 18.5 204 1099-1328 4-217 (277)
441 PRK14243 phosphate transporter 100.0 1.3E-33 2.7E-38 320.0 21.8 200 443-648 9-224 (264)
442 COG0410 LivF ABC-type branched 100.0 1.2E-33 2.6E-38 294.7 19.6 197 444-650 3-213 (237)
443 TIGR01186 proV glycine betaine 100.0 3.2E-34 6.9E-39 334.0 17.0 190 1112-1327 5-206 (363)
444 PRK14265 phosphate ABC transpo 100.0 1.9E-33 4.1E-38 319.9 22.9 202 442-649 18-235 (274)
445 PRK13641 cbiO cobalt transport 100.0 5.3E-34 1.2E-38 326.7 18.4 204 1099-1328 2-222 (287)
446 PRK10771 thiQ thiamine transpo 100.0 1E-33 2.2E-38 315.2 20.1 200 1100-1328 2-207 (232)
447 COG1137 YhbG ABC-type (unclass 100.0 5.9E-35 1.3E-39 294.1 9.1 197 444-649 4-214 (243)
448 PRK14261 phosphate ABC transpo 100.0 1.1E-33 2.4E-38 319.3 20.6 202 444-650 6-224 (253)
449 PRK14271 phosphate ABC transpo 100.0 9.8E-34 2.1E-38 322.3 20.3 202 443-649 20-237 (276)
450 PRK15093 antimicrobial peptide 100.0 7.5E-34 1.6E-38 330.8 19.8 198 444-649 3-234 (330)
451 PRK11300 livG leucine/isoleuci 100.0 5.4E-34 1.2E-38 322.5 18.0 217 1099-1329 5-232 (255)
452 COG4175 ProV ABC-type proline/ 100.0 2.7E-34 5.8E-39 308.1 14.5 183 460-650 43-241 (386)
453 PRK11831 putative ABC transpor 100.0 6.5E-34 1.4E-38 323.3 18.6 204 1099-1328 7-221 (269)
454 PRK10895 lipopolysaccharide AB 100.0 7.8E-34 1.7E-38 318.2 19.0 204 1099-1328 3-214 (241)
455 PRK13541 cytochrome c biogenes 100.0 1.2E-33 2.7E-38 305.7 19.9 186 445-645 2-193 (195)
456 cd03291 ABCC_CFTR1 The CFTR su 100.0 2.5E-33 5.4E-38 317.8 23.2 195 1097-1328 37-235 (282)
457 cd03229 ABC_Class3 This class 100.0 5.8E-34 1.2E-38 303.4 16.8 168 1100-1328 1-178 (178)
458 PRK11231 fecE iron-dicitrate t 100.0 6.8E-34 1.5E-38 321.1 18.4 206 1100-1328 3-215 (255)
459 cd03267 ABC_NatA_like Similar 100.0 6E-34 1.3E-38 317.4 17.5 185 457-649 33-229 (236)
460 PRK11614 livF leucine/isoleuci 100.0 6.1E-34 1.3E-38 318.2 17.6 199 1099-1328 5-214 (237)
461 PRK14247 phosphate ABC transpo 100.0 7.2E-34 1.6E-38 320.3 18.3 209 1099-1328 3-222 (250)
462 PRK14259 phosphate ABC transpo 100.0 5.8E-34 1.3E-38 323.5 17.6 205 1098-1326 12-228 (269)
463 PRK14252 phosphate ABC transpo 100.0 2.3E-33 5E-38 318.5 22.5 199 442-649 14-235 (265)
464 PRK13638 cbiO cobalt transport 100.0 6.3E-34 1.4E-38 324.0 17.9 202 1100-1328 2-213 (271)
465 PRK13639 cbiO cobalt transport 100.0 6E-34 1.3E-38 324.4 17.7 204 1100-1329 2-215 (275)
466 cd03234 ABCG_White The White s 100.0 5.4E-34 1.2E-38 316.1 16.8 202 1100-1327 4-220 (226)
467 PRK15079 oligopeptide ABC tran 100.0 6.2E-34 1.3E-38 330.2 17.8 207 1098-1328 7-239 (331)
468 TIGR01184 ntrCD nitrate transp 100.0 8E-34 1.7E-38 315.1 17.9 182 461-650 1-191 (230)
469 PRK10418 nikD nickel transport 100.0 1.9E-33 4.1E-38 317.2 21.1 195 444-650 4-217 (254)
470 PRK13640 cbiO cobalt transport 100.0 8.1E-34 1.7E-38 324.3 18.3 205 1098-1328 4-220 (282)
471 PRK13538 cytochrome c biogenes 100.0 9.8E-34 2.1E-38 308.7 18.1 195 1100-1324 2-202 (204)
472 PRK14268 phosphate ABC transpo 100.0 8.1E-34 1.8E-38 320.9 18.0 208 1098-1328 11-230 (258)
473 PRK14258 phosphate ABC transpo 100.0 1.6E-33 3.4E-38 318.9 20.3 202 443-649 6-226 (261)
474 TIGR02769 nickel_nikE nickel i 100.0 9.1E-34 2E-38 321.6 18.3 205 1099-1328 2-228 (265)
475 PRK14263 phosphate ABC transpo 100.0 2.5E-33 5.5E-38 316.5 21.8 199 444-648 8-222 (261)
476 PRK13648 cbiO cobalt transport 100.0 1.3E-33 2.7E-38 321.2 19.1 204 1099-1328 7-219 (269)
477 cd03232 ABC_PDR_domain2 The pl 100.0 1.5E-33 3.2E-38 303.9 18.7 172 444-652 3-187 (192)
478 PRK09473 oppD oligopeptide tra 100.0 1.4E-33 3.1E-38 327.4 19.9 199 443-649 11-237 (330)
479 TIGR03873 F420-0_ABC_ATP propo 100.0 1.2E-33 2.7E-38 319.2 18.8 206 1100-1328 2-214 (256)
480 TIGR02323 CP_lyasePhnK phospho 100.0 2.2E-33 4.7E-38 317.0 20.8 198 444-650 3-225 (253)
481 PRK14246 phosphate ABC transpo 100.0 1.8E-33 4E-38 316.9 19.9 199 442-649 8-227 (257)
482 PRK13548 hmuV hemin importer A 100.0 1.6E-33 3.5E-38 318.0 19.3 203 1099-1328 2-218 (258)
483 PRK14256 phosphate ABC transpo 100.0 1.6E-33 3.4E-38 317.8 19.1 210 1097-1328 2-224 (252)
484 cd03213 ABCG_EPDR ABCG transpo 100.0 1.6E-33 3.4E-38 304.0 18.2 169 444-649 3-187 (194)
485 COG4619 ABC-type uncharacteriz 100.0 2.9E-34 6.3E-39 280.3 11.1 191 1111-1328 14-211 (223)
486 TIGR01978 sufC FeS assembly AT 100.0 1.3E-33 2.9E-38 317.1 18.3 211 1100-1328 1-222 (243)
487 PRK14267 phosphate ABC transpo 100.0 1E-33 2.3E-38 319.6 17.3 209 1099-1328 4-225 (253)
488 PRK14237 phosphate transporter 100.0 2E-33 4.4E-38 318.9 19.6 209 1098-1328 19-239 (267)
489 PRK14251 phosphate ABC transpo 100.0 1.2E-33 2.5E-38 318.8 17.4 208 1099-1328 4-223 (251)
490 PRK14272 phosphate ABC transpo 100.0 2.1E-33 4.6E-38 317.0 19.5 202 444-650 4-223 (252)
491 cd03215 ABC_Carb_Monos_II This 100.0 2E-33 4.4E-38 300.3 18.2 161 444-649 4-179 (182)
492 PRK14244 phosphate ABC transpo 100.0 1.2E-33 2.7E-38 318.4 17.3 209 1100-1329 6-226 (251)
493 PRK13540 cytochrome c biogenes 100.0 1.7E-33 3.6E-38 305.9 17.7 191 1100-1322 2-197 (200)
494 PRK10253 iron-enterobactin tra 100.0 1.7E-33 3.7E-38 319.4 18.5 208 1098-1328 6-221 (265)
495 PRK14240 phosphate transporter 100.0 2.4E-33 5.1E-38 316.1 18.9 209 1098-1328 2-222 (250)
496 COG4181 Predicted ABC-type tra 100.0 1.4E-33 3.1E-38 276.3 14.8 204 1099-1328 6-223 (228)
497 cd03233 ABC_PDR_domain1 The pl 100.0 3.3E-33 7.1E-38 303.6 19.3 175 444-649 3-195 (202)
498 PRK14245 phosphate ABC transpo 100.0 1.5E-33 3.2E-38 317.6 17.1 208 1099-1328 3-222 (250)
499 PRK14266 phosphate ABC transpo 100.0 4.2E-33 9.1E-38 314.1 20.7 201 444-649 3-220 (250)
500 PRK10070 glycine betaine trans 100.0 1.8E-33 4E-38 331.3 18.1 202 1100-1328 29-242 (400)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-136 Score=1275.07 Aligned_cols=1125 Identities=18% Similarity=0.211 Sum_probs=749.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 105 RDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISEN----ILLCFLLSTMHSTSKYITGTLSLQFRKIVT 180 (1338)
Q Consensus 105 ~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~~R~~lt 180 (1338)
.++.+.++.+++.-...-.+..+.+.+.+.+...........+..+ +.+.++..+...+........+.| .+
T Consensus 28 ~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~~~~~~~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geR----q~ 103 (1228)
T KOG0055|consen 28 LLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNKIASSEVSKVALYFVYLGVGVFISGFIQVSCWMRTGER----QT 103 (1228)
T ss_pred HHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HH
Confidence 4344455555555555556667777888877765522211222222 222222222233444444555555 89
Q ss_pred HHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhchhhHHHHHHHHHH
Q 000711 181 KLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVL 259 (1338)
Q Consensus 181 ~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~ 259 (1338)
.++|++|++..+.++++|||.+ .++..+|+++|++++.+.+.+.+..++..+.+ |+-.+.+.++..|.++++++.+.|
T Consensus 104 ~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~-fi~g~ii~F~~~W~Ltlv~l~~~P 182 (1228)
T KOG0055|consen 104 ARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLAT-FIAGFVIGFYYGWKLTLVMLSFIP 182 (1228)
T ss_pred HHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999975 57999999999999999999988866554433 333445566678889999998888
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q 000711 260 GAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRV-VLHDHWWFGMIQ 338 (1338)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 338 (1338)
+..+....+.+.+.+...++++..++.-...++...++++|.+|+||+.|. ++|.+..+..++ .++...+.++..
T Consensus 183 li~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~----~ry~~~L~~~~k~gi~~g~~~G~~~ 258 (1228)
T KOG0055|consen 183 LIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEI----ERYSKALENALKFGIKKGLFKGLGL 258 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888777778888889999999998988888899999999999999999998 566665554443 355555555543
Q ss_pred HHHHHHHHHHHHHHHHHHhHhcccccCC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 339 DFLLKYLGATVAVILIIEPFFAGNLKPD-TSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELM 417 (1338)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~ 417 (1338)
.+...++....+.. .|+++.+... ..+.|.. +. .+.+++.. -.++++..+.+..+..+.+++.+|++++
T Consensus 259 G~~~~~~~~~~a~~----~WyG~~li~~~~~~~g~v--~~---v~~~vl~g-~~sLgqa~p~l~~f~~a~~aa~~I~~~i 328 (1228)
T KOG0055|consen 259 GFTFFLLFASYALA----FWYGSTLILNGGYNGGDV--IT---VFFSVLIG-GMSLGQASPHLSAFAKARAAAYRIFETI 328 (1228)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHhcCCCCCceE--EE---EEeehhhh-hhhhhccccchHHHhccccchHHHHHHh
Confidence 33221122222222 2444343222 1222221 10 01112222 2377888888899999999999999999
Q ss_pred HhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCC--CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCC
Q 000711 418 VISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW 495 (1338)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~ 495 (1338)
+..+.++..+. .........+.|+|+||+|+||.. .++|+|+||+|++|+.++|||||||||||++++|.|+|
T Consensus 329 ~~~~~i~~~~~-----~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~Rfy 403 (1228)
T KOG0055|consen 329 DRKPSIDPYSK-----GGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFY 403 (1228)
T ss_pred cCCCCCCcccc-----cCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhc
Confidence 88776543210 011111236789999999999975 48999999999999999999999999999999999999
Q ss_pred CCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCC
Q 000711 496 PLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPP 569 (1338)
Q Consensus 496 ~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 569 (1338)
+|++|+|.+||.+ +++|++||.|.|+|.+|++||+|||.||.++ .+.+++.++++.++.++++..+|.
T Consensus 404 dP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~d------at~~~i~~a~k~ana~~fi~~lp~ 477 (1228)
T KOG0055|consen 404 DPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPD------ATREEIEEAAKAANAHDFILKLPD 477 (1228)
T ss_pred CCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCc------ccHHHHHHHHHHccHHHHHHhhHH
Confidence 9999999999987 4578899999999999999999999999754 688999999999999999999998
Q ss_pred Cccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhhcceE
Q 000711 570 EKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVV 644 (1338)
Q Consensus 570 ~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i 644 (1338)
+.++ +.|.+|||||||||||||||+++|+||||||||||||+++|+.++++|.+ .|+|.|+|+||+++++++|+|
T Consensus 478 g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I 557 (1228)
T KOG0055|consen 478 GYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKI 557 (1228)
T ss_pred hhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEE
Confidence 7665 46789999999999999999999999999999999999999999999976 599999999999999999999
Q ss_pred EEccCCCceEEeecCCCcccccccchh-hcccccccc----chhhHHHHHHHHHhhcccccC-CcccchhhhHHHhhCCC
Q 000711 645 LSLDGEGEWRVHDKRDGSSVVTKSGIN-MIKSSETDR----QSDAMAVEQAFVTAKKDSAFS-NPKAQSYVSEVIAASPI 718 (1338)
Q Consensus 645 ~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 718 (1338)
++++++ ..++...+.+.......+. .....+.+. ..+..........+...+... ............. ...
T Consensus 558 ~v~~~G--~IvE~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~-~~~ 634 (1228)
T KOG0055|consen 558 AVMEEG--KIVEQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLLS-VKP 634 (1228)
T ss_pred EEEECC--EEEEecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCcccccccc-ccc
Confidence 999973 3444443322211111111 000000000 000000000000000000000 0000000000000 000
Q ss_pred CCCCCCCCCccccccCcccchhhHHhHHHHhhccccchhhHHHH----HHHHHHHHHHHHHHHHHhhcchHHHHHHhcCH
Q 000711 719 ADHNVPLPVFPQLKSAPRILPLRVADMFKVLVPTVFDKQGAQLL----AVAFLVVSRTWISDRIASLNGTTVKYVLEQDK 794 (1338)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~ 794 (1338)
++... ..+..........+++.. ...|.|.....|.+. +...++++..+ +..+..+........ +..
T Consensus 635 -~~e~~--~~~~~~~~~~~s~~~i~k---~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~-s~~~~~f~~~~~~~~--~~~ 705 (1228)
T KOG0055|consen 635 -EGEDP--EEPVSEEDEKVSFWRIFK---LNKPEWPYLLLGSLGAAIRGATYPLFAYVF-SQVLEAFYPPDDDEL--KRE 705 (1228)
T ss_pred -ccccc--ccccccccccccHHHHHH---hccchhHHHHHHHHHHHHhhhhHHHHHHHH-HHHHHHHhCCChHHH--HHH
Confidence 00000 000000001112233332 222332222222222 12222222211 111111110000000 001
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccchhhcccCCCCCCccchhHHHHHHHHH
Q 000711 795 ASFVRLIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTT 873 (1338)
Q Consensus 795 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~-~~ff~~~~~~~~~~~~~~Rls~D~~~l~~ 873 (1338)
..+ +..++++.++...+..++..++...++..|..+++.+++++.|++ ..|||..+++ +.+.+|+++|...+..
T Consensus 706 ~~~--~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns---g~l~~RLa~Da~~vr~ 780 (1228)
T KOG0055|consen 706 VRA--WALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS---GALSSRLATDASNVRA 780 (1228)
T ss_pred HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc---hHHHHHHhcchHHHHH
Confidence 112 223344445555556666667777778888888888888888886 5999987765 6688999999987655
Q ss_pred HHHH----HHHH---hhHhHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHH-hccchHHHHH
Q 000711 874 DLSG----LVTG---MVKPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQ-LEGTFRFMHE 945 (1338)
Q Consensus 874 ~l~~----~~~~---~i~~~~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-le~~~r~~~~ 945 (1338)
.+.. ++.. ++.+++..++++|+|++++.. ..+++++......+.. .....+.++ .+...+.+ .
T Consensus 781 ~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la----~~Pll~~~~~~~~~~~----~~~~~~~~~~~~ea~~iA-~ 851 (1228)
T KOG0055|consen 781 AVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLA----TFPLLILSGYLQKKFL----KGFSKDDKKAYEEASKIA-I 851 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH----hhhhHHHHHHHHHHHHHH-H
Confidence 4333 3322 333445557899999987522 1111111111111211 111222222 23333333 3
Q ss_pred HHHhhHHHhhhcCChHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhc
Q 000711 946 RLRAHAESVAFFGGGAREKAMIESRFRELL-EHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVST 1024 (1338)
Q Consensus 946 ~~~~~~e~i~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1024 (1338)
+..+++++|++|+.+ .+. .+.|.+.+ ...+...++.++.++... ..+......++++++|+..+...... +
T Consensus 852 eai~NIrTV~al~~e---~~~-~~~y~~~l~~p~~~~~~~~~i~gl~f~--~sqs~~~~~~A~~f~~G~~Li~~g~~--~ 923 (1228)
T KOG0055|consen 852 EAVSNIRTVAALCAE---EKF-MELYKEELEKPRKSSFKRGLISGLGFG--FSQSLLFFVYALSFWYGARLISNGEM--T 923 (1228)
T ss_pred HHHHhHHHHHHHhhH---HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhHHHHhcCCc--C
Confidence 445688999998743 333 33444444 455566677777666533 33444456677888887654332211 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEee
Q 000711 1025 QGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSK 1104 (1338)
Q Consensus 1025 ~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~n 1104 (1338)
+..+... | .++......+++.....+.+.....|+.+|+++++.++..+... +....+| ..+|+|+|+|
T Consensus 924 ~~~~~~v--f--~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~-----~~~~~~~--~~~G~I~~~~ 992 (1228)
T KOG0055|consen 924 FEDVFRV--F--MALSFTAMALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPDS-----TSGGKLP--NVKGDIEFRN 992 (1228)
T ss_pred HHHHHHH--H--HHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCC-----CCCCccc--cceeEEEEee
Confidence 2222111 1 11222334455566677778888899999999998765332211 1111122 2589999999
Q ss_pred eEEeCCCc--cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCC
Q 000711 1105 LDIITPSQ--KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQR 1180 (1338)
Q Consensus 1105 V~f~yp~~--~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQd 1180 (1338)
|+|.||++ .+||+|+||+|++||+|||||||||||||++.+|+|||||++|+|.|||.||+++ +++|++|++|+||
T Consensus 993 V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQE 1072 (1228)
T KOG0055|consen 993 VSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQE 1072 (1228)
T ss_pred eEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccC
Confidence 99999985 4799999999999999999999999999999999999999999999999999998 6899999999999
Q ss_pred CCCCCCCHHHHhcCCC-c-hHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCC
Q 000711 1181 PYTCLGTLRDQIIYPL-S-REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILS 1257 (1338)
Q Consensus 1181 P~LF~GTIReNL~~p~-~-~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LS 1257 (1338)
|.||++||||||.|+. . +++|+++|||.|++|+| +..+|+||||.+ ++|.+||
T Consensus 1073 P~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~F------------------------I~sLP~GyDT~vGerG~QLS 1128 (1228)
T KOG0055|consen 1073 PVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNF------------------------ISSLPQGYDTRVGERGVQLS 1128 (1228)
T ss_pred chhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHH------------------------HhcCcCcccCccCcccCcCC
Confidence 9999999999999983 2 56777888888876554 445678999998 5899999
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
||||||||||||++||||||+|||||||||.++|+.+|+++.. .|+|+|+|||||+||+-+|.+.++.+|.
T Consensus 1129 GGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~ 1201 (1228)
T KOG0055|consen 1129 GGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGK 1201 (1228)
T ss_pred chHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCE
Confidence 9999999999999999999999999999999999999998854 5999999999999999999999997763
No 2
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.1e-127 Score=1220.10 Aligned_cols=1110 Identities=18% Similarity=0.208 Sum_probs=714.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLI--SENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIH 184 (1338)
Q Consensus 107 l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~R~~lt~~l~ 184 (1338)
+++..++..+...+....|.+.+.+++.+.+...+....++ +..++..++.+++..-..|...++++++|..++..+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~IY 282 (1381)
T KOG0054|consen 203 FLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAIY 282 (1381)
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHH
Confidence 33334444444445677888888888888776333221111 1111111122233344677889999999999888777
Q ss_pred HHHhccccccccccc-CCCCCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHH
Q 000711 185 TRYFENMAYYKISHV-DGRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGT 263 (1338)
Q Consensus 185 ~~~~~~~~~~~~~~~-d~~~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~ 263 (1338)
++-+ .+.-... +...|...+-++.|++++.+....+ ..+-.+.+-+++..+.|+...++.-..- ++..++..-
T Consensus 283 ~K~L----~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~-h~~w~~Plqi~~~l~lLy~~LG~sa~~G-~~~~il~~p 356 (1381)
T KOG0054|consen 283 RKAL----RLSNSARGETTVGEIVNLMSVDAQRLSDAACFL-HLLWSAPLQIILALYLLYGLLGPSALAG-VAVMVLLIP 356 (1381)
T ss_pred Hhhh----cCchhhccCCCcchhhhhhhhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhChHHHHH-HHHHHHHHH
Confidence 6654 3332222 2346788889999999988765433 2222222322222223332222221111 111111111
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 264 MMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLK 343 (1338)
Q Consensus 264 ~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (1338)
+-.++++...+...++.+...+--...+++.++++.||+|+||+.+.+++++..++..+..++...... +..+...
T Consensus 357 ~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~----~~~~~~~ 432 (1381)
T KOG0054|consen 357 LNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSA----LNSFLNF 432 (1381)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 223345555555444444333333567888889999999999999998888776666665554322221 1111111
Q ss_pred HHHHHHHHHHHHHhHh--cccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 000711 344 YLGATVAVILIIEPFF--AGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISR 421 (1338)
Q Consensus 344 ~~~~~~~~~~~~~~~~--~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~~~~~ 421 (1338)
.....+.+ +.+..+. .|.. .+... .+. ..+++..+-.++..+...+..+.++..+.+|+.+++..++
T Consensus 433 ~~p~lv~~-~tF~~~v~~~~~~----lt~~~--aF~----slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e 501 (1381)
T KOG0054|consen 433 FSPVLVSV-VTFVVFVLLLGNL----LTAST--AFT----SLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEE 501 (1381)
T ss_pred HHHHHHHH-HHHHHHhhccCcc----ccHhH--HHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 11111111 1111111 1111 11111 111 2233444445677777778888888999999999987644
Q ss_pred hccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCC--CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCc
Q 000711 422 ELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVS 499 (1338)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~--~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~ 499 (1338)
.... ... .. ........++++|.++...+ ..+.|+|+||+|++|+.++|+||.|||||||+.+|+|+.+..+
T Consensus 502 ~~~~-~~~--~~---~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~s 575 (1381)
T KOG0054|consen 502 LDPD-SVE--RS---PDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLS 575 (1381)
T ss_pred cCcc-ccc--cC---CCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCccccc
Confidence 3221 110 00 01112456999999997643 3569999999999999999999999999999999999999999
Q ss_pred cEEEeCCCCccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---cCC
Q 000711 500 GHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWG 576 (1338)
Q Consensus 500 G~i~~~~~~~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g 576 (1338)
|++.++| .++||||.||+++|||||||+||.+ .++++++++++.|.|+++++.+|.++.+ +.|
T Consensus 576 G~v~v~g-------siaYv~Q~pWI~ngTvreNILFG~~-------~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErG 641 (1381)
T KOG0054|consen 576 GSVAVNG-------SVAYVPQQPWIQNGTVRENILFGSP-------YDEERYDKVIKACALKKDLEILPFGDLTEIGERG 641 (1381)
T ss_pred ceEEEcC-------eEEEeccccHhhCCcHHHhhhcCcc-------ccHHHHHHHHHHccCHhHHhhcCCCCcceecCCc
Confidence 9999987 6999999999999999999999975 4678999999999999999999987776 478
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHhhcceEEEccCCCce
Q 000711 577 DELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSLDGEGEW 653 (1338)
Q Consensus 577 ~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~~~d~i~~l~~~g~~ 653 (1338)
.+|||||||||+||||+|+++||++||+|.||+|.++.++|++.+-. .++|+|+|||+++.++.+|.|++|+++ .
T Consensus 642 inLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G-~- 719 (1381)
T KOG0054|consen 642 INLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDG-K- 719 (1381)
T ss_pred cCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCC-e-
Confidence 89999999999999999999999999999999999999999998754 389999999999999999999999973 2
Q ss_pred EEeecCCCccccc-ccchhhccccccccchhhHHHHHHHHHhhcccccCCcccchhhhHHHhhCC-C-CCCC-CCCCCcc
Q 000711 654 RVHDKRDGSSVVT-KSGINMIKSSETDRQSDAMAVEQAFVTAKKDSAFSNPKAQSYVSEVIAASP-I-ADHN-VPLPVFP 729 (1338)
Q Consensus 654 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~-~~~~~~~ 729 (1338)
..+ .+..+.... ........ .+.+.+....... ...+... ..........+...... . .+.. .......
T Consensus 720 I~~-~Gty~el~~~~~~~~~l~-~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (1381)
T KOG0054|consen 720 IVE-SGTYEELLKSGGDFAELA-HEEESEQEEEASE----KDLESGE-SSRESESRSLESLSSEEEKSKDEKEEEDKLVQ 792 (1381)
T ss_pred Eec-ccCHHHHHhcchhHHHHh-hccchhhcccccc----ccccccc-cccchhhhhhhhhcccccccccccchhhHHHH
Confidence 222 111111100 00000000 0000000000000 0000000 00000000000000000 0 0000 0000000
Q ss_pred ccccCcccchhhHHhHHHHhhccccch------hhHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHhcCHHHHHHHHHH
Q 000711 730 QLKSAPRILPLRVADMFKVLVPTVFDK------QGAQLLAVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGV 803 (1338)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 803 (1338)
...++.+...+.+ ++.++...... ....+......+.+++|++.|.......... . ..-..++++
T Consensus 793 ~ee~~~G~v~~~v---Y~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~---~---~~~~~~~~v 863 (1381)
T KOG0054|consen 793 EEERETGKVSWSV---YKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTT---T---VSTSFYLGV 863 (1381)
T ss_pred HHHHhcCEeeHHH---HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc---C---CCcchHHHH
Confidence 0011112222222 22222210000 0011112233456788999887653211000 0 011224566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHh
Q 000711 804 SVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGM 882 (1338)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~-~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~ 882 (1338)
|.+.+++..++.....+.....+.+..++||++++++++|. ++|||.++.++ +.|||++|++.+|..++..+..+
T Consensus 864 Y~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GR----ILNRFSkD~~~vD~~Lp~~~~~~ 939 (1381)
T KOG0054|consen 864 YALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGR----ILNRFSKDIDTVDVLLPFTLEFF 939 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccc----hhhhcccchHHHHHhhHHHHHHH
Confidence 66666776666666666677778888999999999999997 58999776544 79999999999999999888887
Q ss_pred hHhHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHH-HHHHHH---hhHHHhhhcC
Q 000711 883 VKPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRF-MHERLR---AHAESVAFFG 958 (1338)
Q Consensus 883 i~~~~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~-~~~~~~---~~~e~i~~~~ 958 (1338)
+..++.++.....++.+..+ +.++.+++.+..++++. .|...+++.+|+|+..|+ .+.++. .+..+|++|+
T Consensus 940 ~~~~~~~l~~~~vi~~~~P~--fli~~~pl~v~~~~~~~---~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~ 1014 (1381)
T KOG0054|consen 940 LQSLLNVLGILVVISYVTPW--FLIAIIPLGVIYYFVQR---YYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFG 1014 (1381)
T ss_pred HHHHHHHHHHHHHhhHHhHH--HHHHHHHHHHHHHHHHH---HHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeecc
Confidence 77665554333222222211 11111222222222222 244557788999998774 223333 2456789998
Q ss_pred ChHHHHHHHHHHHHHHHHHHH----HHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHH
Q 000711 959 GGAREKAMIESRFRELLEHSL----LLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRF 1034 (1338)
Q Consensus 959 ~~~~e~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~ 1034 (1338)
.+++ +.+.+.+..|... .......|+++..+++...+. +..++. ++...... ..+|.++.++.|
T Consensus 1015 ~~~r----f~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v----~~~al~-~vl~~~~~---~~~g~vGLslsy 1082 (1381)
T KOG0054|consen 1015 KEER----FIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVV----LIAALF-AVLLPSGL---ISPGLVGLSLSY 1082 (1381)
T ss_pred ccHH----HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHH-HHHccCCC---CCcchHHHHHHH
Confidence 5543 4455555555332 223333334444444432221 112222 22111110 135667777766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeC-CCcc
Q 000711 1035 LASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIIT-PSQK 1113 (1338)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~y-p~~~ 1113 (1338)
.. ++...+++++......+....|+|||.||.+.+++ . +...+...||++||. +|+|+|+|++++| |+.|
T Consensus 1083 al----~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E-~-p~~~~~~~pp~~WP~---~G~I~f~~~~~RYrp~lp 1153 (1381)
T KOG0054|consen 1083 AL----QLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSE-A-PLEIEESRPPPSWPS---KGEIEFEDLSLRYRPNLP 1153 (1381)
T ss_pred HH----HHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCC-C-CCCCcCCCCCCCCCC---CCeEEEEEeEEEeCCCCc
Confidence 54 23334455555555555556899999999987765 1 122222337889998 7999999999965 7789
Q ss_pred ccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHH
Q 000711 1114 LLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQ 1191 (1338)
Q Consensus 1114 ~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReN 1191 (1338)
+|||||||+|+||||||||||||||||||+++|+|+.||.+|+|.|||+||+++ +.+|++|++|||||+||+||+|.|
T Consensus 1154 ~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~N 1233 (1381)
T KOG0054|consen 1154 LVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFN 1233 (1381)
T ss_pred chhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccc
Confidence 999999999999999999999999999999999999999999999999999998 788999999999999999999999
Q ss_pred hcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHh
Q 000711 1192 IIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLF 1270 (1338)
Q Consensus 1192 L~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAl 1270 (1338)
|| |+. +..|+++|++||.++|++.++++|+|||+.+ +.|.|||.||||++|+||||
T Consensus 1234 LD-Pf~----------------------e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARAL 1290 (1381)
T KOG0054|consen 1234 LD-PFD----------------------EYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARAL 1290 (1381)
T ss_pred cC-ccc----------------------ccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHH
Confidence 96 764 2468899999999999999999999999998 68999999999999999999
Q ss_pred hcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1271 FHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1271 Lr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
||++|||+||||||++|++|+..||+++++ ++||||+||||++||-.+|++++|++|+
T Consensus 1291 Lr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~ 1350 (1381)
T KOG0054|consen 1291 LRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGR 1350 (1381)
T ss_pred hccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCe
Confidence 999999999999999999999999999875 6999999999999999999999998774
No 3
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2.4e-116 Score=1179.72 Aligned_cols=1156 Identities=14% Similarity=0.133 Sum_probs=694.5
Q ss_pred HHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 88 LQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYI 167 (1338)
Q Consensus 88 l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 167 (1338)
+.+++++.-+..+ .++++.++++++.......+|.+.+.+++.+...+ ......+ .++++.++..+..|+
T Consensus 47 ~~~~~~~~~~~~~----~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~--~~~~~~~----~~~~~~i~~~~~~~~ 116 (1466)
T PTZ00265 47 FFLPFKCLPASHR----KLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGE--NVNDIIF----SLVLIGIFQFILSFI 116 (1466)
T ss_pred HHHHHhcCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--hHHHHHH----HHHHHHHHHHHHHHH
Confidence 4566666655433 33566666677777777888888888888764221 1111111 111222223344455
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccCCCCC-CchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Q 000711 168 TGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGRIT-HPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYA 246 (1338)
Q Consensus 168 ~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~~~-n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~ 246 (1338)
...+....-++++.++|.+||+++++++++|+|...+ ...+|+++|++.+.+.+...+..++..++.. +.++.+++++
T Consensus 117 ~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~-i~~~i~~~~~ 195 (1466)
T PTZ00265 117 SSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAF-LGLYIWSLFK 195 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 5555555555599999999999999999999987643 6778888888888887777776666655443 3344556678
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Q 000711 247 SPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRV 326 (1338)
Q Consensus 247 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~ 326 (1338)
+|.+++++++.+|+..++..++++.+.+...+.++..+++.....+...++++|+.|++|+.+.+++.+......+.
T Consensus 196 sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~--- 272 (1466)
T PTZ00265 196 NARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKY--- 272 (1466)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHH---
Confidence 99999998888887777777778888777777777777788888888889999999999999986555433332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccccCC---------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 327 VLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPD---------TSTLGRAKMLSNLRYHTSVIISLFQSLGTLS 397 (1338)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---------~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~ 397 (1338)
..+.....++...+.........++++ |+++.+... ..+.|. +++.+ ...+ ..+..+..+.
T Consensus 273 ~~k~~~~~~~~~~~~~~~~~~~~~l~~----~~G~~lv~~g~~~~~~~~~~t~g~--v~~~~---~~~l-~~~~~l~~i~ 342 (1466)
T PTZ00265 273 ILKANFMESLHIGMINGFILASYAFGF----WYGTRIIISDLSNQQPNNDFHGGS--VISIL---LGVL-ISMFMLTIIL 342 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHcCCcccccccccchhH--HHHHH---HHHH-HHHHHHHHHH
Confidence 223333333333222211111122222 233322211 123332 22211 1111 1223345566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCC--CeeeeeeeEEEeCCCEEE
Q 000711 398 ISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLL 475 (1338)
Q Consensus 398 ~~~~~l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~--~~~l~~~sl~i~~G~~~~ 475 (1338)
..+..+++...+++|+.++++.+++.+.... ....+..+.|+|+||+|.||+. .++|+|+||+|++||+++
T Consensus 343 ~~~~~~~~a~~a~~ri~~ii~~~~~~~~~~~-------~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~va 415 (1466)
T PTZ00265 343 PNITEYMKSLEATNSLYEIINRKPLVENNDD-------GKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYA 415 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-------CccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEE
Confidence 6778889999999999999987654321100 0001112469999999999853 479999999999999999
Q ss_pred EEcCCCCcHHHHHHHHcCCCCCCccEEEeC-CCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCC--------
Q 000711 476 ITGPNGSGKSSLFRVLGGLWPLVSGHIAKP-GVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSD-------- 540 (1338)
Q Consensus 476 i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~-~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~-------- 540 (1338)
|+||||||||||+++|+|+|+|++|+|.++ |.+ .+++++|+||||+|.+|++|++|||.++....
T Consensus 416 IvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~ 495 (1466)
T PTZ00265 416 FVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSN 495 (1466)
T ss_pred EECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhcc
Confidence 999999999999999999999999999994 554 23577899999999999999999999974210
Q ss_pred -------------------------------------------cccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---c
Q 000711 541 -------------------------------------------QEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---N 574 (1338)
Q Consensus 541 -------------------------------------------~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~ 574 (1338)
......+++++.++++.++++++++++|.+.++ +
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~ 575 (1466)
T PTZ00265 496 YYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGS 575 (1466)
T ss_pred ccccccccccccccccccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCC
Confidence 000135678999999999999999999987654 3
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 575 WGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 575 ~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
.|.+|||||||||+|||||+++|++||||||||+||+++++.+++.+++ .|+|+|+||||+++++.||+|++|+++
T Consensus 576 ~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g 655 (1466)
T PTZ00265 576 NASKLSGGQKQRISIARAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNR 655 (1466)
T ss_pred CCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCC
Confidence 5789999999999999999999999999999999999999999998865 379999999999999999999999863
Q ss_pred -Cc--------------------------------------------eEEeecCCCcccc-cccchhhccccccccchhh
Q 000711 651 -GE--------------------------------------------WRVHDKRDGSSVV-TKSGINMIKSSETDRQSDA 684 (1338)
Q Consensus 651 -g~--------------------------------------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 684 (1338)
.| +.++.+.+.+... ....+..............
T Consensus 656 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~ 735 (1466)
T PTZ00265 656 ERGSTVDVDIIGEDPTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKS 735 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccc
Confidence 11 1111111000000 0000000000000000000
Q ss_pred HHHHHHHHHhhcccccCCcccchhhhHHHh----hCCCCCCCCCCCC-----c---c--cc---cc---CcccchhhHHh
Q 000711 685 MAVEQAFVTAKKDSAFSNPKAQSYVSEVIA----ASPIADHNVPLPV-----F---P--QL---KS---APRILPLRVAD 744 (1338)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-----~---~--~~---~~---~~~~~~~~~~~ 744 (1338)
.............................. ............. . . .. .. .....+.....
T Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (1466)
T PTZ00265 736 SNNDNDKDSDMKSSAYKDSERGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRI 815 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHH
Confidence 000000000000000000000000000000 0000000000000 0 0 00 00 00001111111
Q ss_pred HHHHhhccccchhhHHHH----HHHHHHHHHHHHHHHHHhhcchHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 745 MFKVLVPTVFDKQGAQLL----AVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAASSFIAPSIRH 820 (1338)
Q Consensus 745 ~~~~~~~~~~~~~~~~l~----~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 820 (1338)
+++.+++.......+.+. +.+.++++. .++.++...... ... .....+ +..++++.+++..+..++..+
T Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~--~~~--~~~~~~--~~l~~~~~~i~~~~~~~l~~~ 888 (1466)
T PTZ00265 816 VYREIFSYKKDVTIIALSILVAGGLYPVFAL-LYAKYVSTLFDF--ANL--EANSNK--YSLYILVIAIAMFISETLKNY 888 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcc--hHH--HHHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 111111110000011111 111111111 111111111000 000 000111 111222222333333444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccc-ccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhH-------hHHHHHHH
Q 000711 821 LTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVK-------PSVDILWF 892 (1338)
Q Consensus 821 ~~~~~~~~~r~~l~~~l~~~~l~~-~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~-------~~~~i~~~ 892 (1338)
+..+.+.++..++..++++++++. ..||+..+ ..++++.+|+++|++.+...+...+..++. .++.++++
T Consensus 889 ~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~--~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~ 966 (1466)
T PTZ00265 889 YNNVIGEKVEKTMKRRLFENILYQEISFFDQDK--HAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYF 966 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566666666667777777765 47887422 234668899999999888765543333222 22334566
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHhc----Ccccccc----------HHHHHhccchHHHHHHHHhhHHHhhhcC
Q 000711 893 TWRMKALTGQRGVAILYAYMLLGLGFLRSVT----PEFGDLT----------SREQQLEGTFRFMHERLRAHAESVAFFG 958 (1338)
Q Consensus 893 ~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----------~~~~~le~~~r~~~~~~~~~~e~i~~~~ 958 (1338)
+|.++++.. .+++++...+..... ....... ...++..+.......+...+.++|++|+
T Consensus 967 ~~~l~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~ 1039 (1466)
T PTZ00265 967 CPIVAAVLT-------GTYFIFMRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYG 1039 (1466)
T ss_pred HHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhc
Confidence 777654421 111111111111000 0000000 0001111122223344455778999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHHHHHH
Q 000711 959 GGAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASV 1038 (1338)
Q Consensus 959 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~ 1038 (1338)
.+....+.+++..+...+....... +.+....+ .++...+..++.++++........ .+.|.+..++.+
T Consensus 1040 ~e~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~G~~lv~~g~--it~g~l~~~~~~---- 1108 (1466)
T PTZ00265 1040 LEDYFCNLIEKAIDYSNKGQKRKTL---VNSMLWGF--SQSAQLFINSFAYWFGSFLIRRGT--ILVDDFMKSLFT---- 1108 (1466)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCC--CCHHHHHHHHHH----
Confidence 8776666655544444332222211 11111111 111112223344444432211111 123443322211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCC-CCCCCCCceEEeeeEEeCCCc--ccc
Q 000711 1039 VSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKW-NSTDYQDSISFSKLDIITPSQ--KLL 1115 (1338)
Q Consensus 1039 ~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w-p~~~~~g~I~f~nV~f~yp~~--~~v 1115 (1338)
+.....+++.+......+.....+.+|++++++.+++.+.. ... .... +.....|.|+|+||+|+||+. .+|
T Consensus 1109 ~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~---~~~--~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~v 1183 (1466)
T PTZ00265 1109 FLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVR---DNG--GIRIKNKNDIKGKIEIMDVNFRYISRPNVPI 1183 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCC---CCc--ccccccCCCCCceEEEEEEEEECCCCCCCcc
Confidence 11122235566677788888889999999998654321110 000 0000 011235889999999999863 489
Q ss_pred ccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCC-------------------------------------------
Q 000711 1116 ARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV------------------------------------------- 1152 (1338)
Q Consensus 1116 L~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~------------------------------------------- 1152 (1338)
|+|+||+|+|||++|||||||||||||+++|+|||+|
T Consensus 1184 L~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1263 (1466)
T PTZ00265 1184 YKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKE 1263 (1466)
T ss_pred ccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999998
Q ss_pred -----------CCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccc
Q 000711 1153 -----------VSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTT 1219 (1338)
Q Consensus 1153 -----------~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~ 1219 (1338)
++|+|++||+||+++ ..+|++|+||||||+||+|||||||.|+.+.
T Consensus 1264 ~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~--------------------- 1322 (1466)
T PTZ00265 1264 GGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKED--------------------- 1322 (1466)
T ss_pred cccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCC---------------------
Confidence 699999999999998 4678899999999999999999999986321
Q ss_pred cCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHH
Q 000711 1220 NILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLA 1298 (1338)
Q Consensus 1220 ~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~ 1298 (1338)
..|++++++++.++++++++++|+||||.+ +.|.+|||||||||||||||+|+|+||||||||||||.++|+.+++.+
T Consensus 1323 -at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L 1401 (1466)
T PTZ00265 1323 -ATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTI 1401 (1466)
T ss_pred -CCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHH
Confidence 123444455555556667777899999998 478999999999999999999999999999999999999999998877
Q ss_pred Hh----cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1299 KD----MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1299 ~~----~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
.. .++|+|+||||+++++.+|++++|++|+
T Consensus 1402 ~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~ 1435 (1466)
T PTZ00265 1402 VDIKDKADKTIITIAHRIASIKRSDKIVVFNNPD 1435 (1466)
T ss_pred HHHhccCCCEEEEEechHHHHHhCCEEEEEeCCC
Confidence 54 3899999999999999999999998754
No 4
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.2e-116 Score=1187.37 Aligned_cols=1108 Identities=16% Similarity=0.153 Sum_probs=664.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHH--HHHHHH--HHHHHHHHHHHHHHH
Q 000711 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMH--STSKYI--TGTLSLQFRKIVTKL 182 (1338)
Q Consensus 107 l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l--~~~l~~~~R~~lt~~ 182 (1338)
++..+++.++...+.+..|.+.+.+++.+.+++.+ ....+. .+++ ++..++. ....|. ..+++.+.|..
T Consensus 303 ~~~~~~~~i~~~~~~~~~P~ll~~li~~v~~~~~~-~~~~~~-~~~l-~~~~~~~~~~~~~~~~~~~~~~~~ir~~---- 375 (1622)
T PLN03130 303 FWLGGFFKIGNDLSQFVGPLLLNLLLESMQNGEPA-WIGYIY-AFSI-FVGVVLGVLCEAQYFQNVMRVGFRLRST---- 375 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-hHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 44455566777788888899999999888765522 111111 1111 1111111 112232 33556665544
Q ss_pred HHHHHhcccccccccccCC-CCCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhchhhHHHHHH-HHHHH
Q 000711 183 IHTRYFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWIL-AYVLG 260 (1338)
Q Consensus 183 l~~~~~~~~~~~~~~~~d~-~~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l-~~~~~ 260 (1338)
++...+++.+..+...+++ ..++..+++++|++++.+... .+..+...++..++..+.++. ..++..++. +.+++
T Consensus 376 L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~--~lg~~~l~g~~v~~l 452 (1622)
T PLN03130 376 LVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQ--QLGVASLIGSLMLVL 452 (1622)
T ss_pred HHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 4455666676777666654 357889999999999887653 333333333333322222221 111111111 11111
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 261 AGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDF 340 (1338)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (1338)
...+..++.+...+...+..+...+......++..++++||+|++|+.+.+++++..++..+..++.. .. ..+..+
T Consensus 453 ~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~---~~-~~~~~~ 528 (1622)
T PLN03130 453 MFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQ---LL-SAFNSF 528 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH---HH-HHHHHH
Confidence 11222345556666655555555555567778888999999999999998777665555444332221 11 111111
Q ss_pred HHHHHHHHHHHHHHHHh--HhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 341 LLKYLGATVAVILIIEP--FFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMV 418 (1338)
Q Consensus 341 ~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~~ 418 (1338)
+.......+.+ +.+.. +.+|. .+.|.. ++ +.+++..+..++..+...+..+.+...+.+|+.++++
T Consensus 529 ~~~~~~~~v~~-~~fg~~~~~~g~-----Lt~g~v--f~----~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~ 596 (1622)
T PLN03130 529 ILNSIPVLVTV-VSFGVFTLLGGD-----LTPARA--FT----SLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLL 596 (1622)
T ss_pred HHHHHHHHHHH-HHHHHHHHhCCC-----CCHHHH--HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 11111111111 11111 11222 244432 22 2234445556777788888899999999999999987
Q ss_pred hhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCC--CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC
Q 000711 419 ISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP 496 (1338)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~--~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~ 496 (1338)
.++....... .. ....+.|+++|++|.|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++
T Consensus 597 ~~e~~~~~~~---~~-----~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~ 668 (1622)
T PLN03130 597 AEERVLLPNP---PL-----EPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELP 668 (1622)
T ss_pred CcccccccCC---cc-----cCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhc
Confidence 5433211000 00 011246999999999975 3689999999999999999999999999999999999999
Q ss_pred CCc-cEEEeCCCCccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc--
Q 000711 497 LVS-GHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI-- 573 (1338)
Q Consensus 497 ~~~-G~i~~~~~~~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~-- 573 (1338)
|.+ |+|.+. ++|+||||+||+|++||||||.|+.+ .+++++.++++.|+|+++++.+|.++++
T Consensus 669 ~~~GG~I~l~-------~~Iayv~Q~p~LfngTIreNI~fg~~-------~d~e~y~~vl~a~~L~~di~~LP~Gd~T~I 734 (1622)
T PLN03130 669 PRSDASVVIR-------GTVAYVPQVSWIFNATVRDNILFGSP-------FDPERYERAIDVTALQHDLDLLPGGDLTEI 734 (1622)
T ss_pred cCCCceEEEc-------CeEEEEcCccccCCCCHHHHHhCCCc-------ccHHHHHHHHHHhCcHHHHHhCCCcccccc
Confidence 999 999874 47999999999999999999999864 3578999999999999999999987665
Q ss_pred -cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHH-Hc--cCCeEEEEecChhhHhhcceEEEccC
Q 000711 574 -NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKV-RA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 574 -~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l-~~--~~~t~i~itH~~~~~~~~d~i~~l~~ 649 (1338)
+.|.+|||||||||+||||+|++|+++||||||||||+++++++++.+ +. .++|+|+|||+++.++.+|+|++|++
T Consensus 735 Ge~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~ 814 (1622)
T PLN03130 735 GERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHE 814 (1622)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeC
Confidence 468899999999999999999999999999999999999999987654 33 48999999999999999999999986
Q ss_pred CCceEEeecCCCcccccccchh-hccccc-cccchhhHHHHHHHHHhhcccccCCcccchhhhHHHhhCCCCCCCCCCCC
Q 000711 650 EGEWRVHDKRDGSSVVTKSGIN-MIKSSE-TDRQSDAMAVEQAFVTAKKDSAFSNPKAQSYVSEVIAASPIADHNVPLPV 727 (1338)
Q Consensus 650 ~g~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (1338)
|. ..+.+...+......... ...... .+....... +... ................... ..............
T Consensus 815 -G~-i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 888 (1622)
T PLN03130 815 -GM-IKEEGTYEELSNNGPLFQKLMENAGKMEEYVEENG-EEED-DQTSSKPVANGNANNLKKD--SSSKKKSKEGKSVL 888 (1622)
T ss_pred -CE-EEEeCCHHHHHhcchhHHHHHHhcccccccccccc-cccc-ccccccccccccccccccc--ccccccccccchhh
Confidence 33 222221110000000000 000000 000000000 0000 0000000000000000000 00000000000000
Q ss_pred ccccccCcccchhhH-HhHHHHhhccccch--hhHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHhcCHHHHHHHHHHH
Q 000711 728 FPQLKSAPRILPLRV-ADMFKVLVPTVFDK--QGAQLLAVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVS 804 (1338)
Q Consensus 728 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 804 (1338)
..+..++.+...+.+ ..+++.....+... ....++...+.++..+|++.|....... .+...+ +++++
T Consensus 889 ~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~-------~~~~~~--~~~i~ 959 (1622)
T PLN03130 889 IKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPK-------THGPLF--YNLIY 959 (1622)
T ss_pred hhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC-------CCchhH--HHHHH
Confidence 000011111111111 11111100000000 0000111122234567777766432110 010111 23334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-cchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhh
Q 000711 805 VLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMV 883 (1338)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~~-~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i 883 (1338)
++.+++..+..+...++....+.+...++|.+++++.++.+ .||+.. ..+++.+|+++|++.++..++..+..++
T Consensus 960 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~----~~G~IlnR~s~Di~~id~~l~~~~~~~~ 1035 (1622)
T PLN03130 960 ALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTN----PLGRIINRFAKDLGDIDRNVAVFVNMFL 1035 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccC----CchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444455556677777888888888888864 888743 3467899999999999988776555544
Q ss_pred HhHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccc----hHHHHHHHHhhHHHhhhcCC
Q 000711 884 KPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGT----FRFMHERLRAHAESVAFFGG 959 (1338)
Q Consensus 884 ~~~~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~----~r~~~~~~~~~~e~i~~~~~ 959 (1338)
..++.++.....+..+... ..++++++++...++... +.+..++.++.+.. ......+...+.++|++|+.
T Consensus 1036 ~~~~~~i~~~i~i~~~~~~--~~~~~~pl~~~~~~~~~~---~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~ 1110 (1622)
T PLN03130 1036 GQIFQLLSTFVLIGIVSTI--SLWAIMPLLVLFYGAYLY---YQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKA 1110 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcH
Confidence 4333222111111111100 000111111111111111 11122223333321 11222334457788999985
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH-----HHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccch-hhhchHHHHHHHH
Q 000711 960 GAREKAMIESRFRELLEHSLLLL-----KKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRA-LVSTQGELAHALR 1033 (1338)
Q Consensus 960 ~~~e~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~l~~~l~ 1033 (1338)
+. .+.+.+.+..+...+.. ..+|+ +....++.. .+.+..+ .+.+...+... .....+.++..+.
T Consensus 1111 ~~----~f~~~~~~~~~~~~~~~~~~~~~~~wl-~~~l~~~~~----~~i~~~~-~~~v~~~~~~~~~~~~~~~~G~~ls 1180 (1622)
T PLN03130 1111 YD----RMAEINGRSMDNNIRFTLVNMSSNRWL-AIRLETLGG----LMIWLTA-SFAVMQNGRAENQAAFASTMGLLLS 1180 (1622)
T ss_pred HH----HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH----HHHHHHH-HHHHHcccccccchhhhHHHHHHHH
Confidence 43 33444444444333221 22232 211111111 1111111 11111111000 0000122233332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCC-c
Q 000711 1034 FLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-Q 1112 (1338)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~-~ 1112 (1338)
+ .......+..+......++....+++|+.++.+.+++.+.. .....+++.||. +|.|+|+||+|+|++ .
T Consensus 1181 ~----~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~--~~~~~~~~~wp~---~g~I~f~nVsf~Y~~~~ 1251 (1622)
T PLN03130 1181 Y----ALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLV--IENNRPPPGWPS---SGSIKFEDVVLRYRPEL 1251 (1622)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccc--ccCCCCCCCCCC---CCcEEEEEEEEEeCCCC
Confidence 2 22333445555566666777788999999998665432211 111223457886 689999999998854 5
Q ss_pred cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHH
Q 000711 1113 KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRD 1190 (1338)
Q Consensus 1113 ~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIRe 1190 (1338)
++||+|+||+|+||||||||||||||||||+++|+|||+|++|+|.|||+||+++ +.+|++|++|||||+||+||||+
T Consensus 1252 ~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIre 1331 (1622)
T PLN03130 1252 PPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRF 1331 (1622)
T ss_pred CceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHH
Confidence 7899999999999999999999999999999999999999999999999999998 56788999999999999999999
Q ss_pred HhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHH
Q 000711 1191 QIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARL 1269 (1338)
Q Consensus 1191 NL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARA 1269 (1338)
||++... ..|++++++++.++++++++++|+||||.+ +.|.+||||||||||||||
T Consensus 1332 NLd~~~~-----------------------~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARA 1388 (1622)
T PLN03130 1332 NLDPFNE-----------------------HNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARA 1388 (1622)
T ss_pred HhCcCCC-----------------------CCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHH
Confidence 9975321 246678888888888889999999999998 5789999999999999999
Q ss_pred hhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1270 FFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1270 lLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
|||+|+|||||||||+||.++|+.|++.+++ .+||+|+||||++++..+|++++|++|+
T Consensus 1389 LLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~ 1449 (1622)
T PLN03130 1389 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAGR 1449 (1622)
T ss_pred HHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999998865 5999999999999999999999998764
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=6.1e-115 Score=1179.35 Aligned_cols=1107 Identities=15% Similarity=0.150 Sum_probs=666.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Q 000711 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHST----SKYITGTLSLQFRKIVTKL 182 (1338)
Q Consensus 107 l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~~~~R~~lt~~ 182 (1338)
++..+++.++.+.+.+..|.+.+.+++.+.+.+.+. .... +++++++..++..+ ..+...+++.+.|..+
T Consensus 303 ~~~~~~~~i~~~~~~~~~P~ll~~li~~~~~~~~~~-~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l--- 376 (1495)
T PLN03232 303 FWLGGIFKIGHDLSQFVGPVILSHLLQSMQEGDPAW-VGYV--YAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTL--- 376 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-hHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 444455667788888888999999999887654321 1111 11122222222221 2223356666655544
Q ss_pred HHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhchhhHHHHHHHHH-HH
Q 000711 183 IHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYV-LG 260 (1338)
Q Consensus 183 l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~-~~ 260 (1338)
+...+++.+.++...+++. .++..+|+++|++++.+.. ..+..+...++..++..+.++.. .++..++.+.+ ++
T Consensus 377 -~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~~~--lg~~~l~~~~v~~l 452 (1495)
T PLN03232 377 -VAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLYQQ--LGVASLFGSLILFL 452 (1495)
T ss_pred -HHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHH
Confidence 4555666666666666543 5688899999999988765 33333333333322222222211 11111111111 11
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 261 AGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDF 340 (1338)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (1338)
...+..++++...+...+.++...+......++.++++.||+|++|+.+.+++++..++..+..++.. ...++ ..+
T Consensus 453 ~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~---~~~~~-~~~ 528 (1495)
T PLN03232 453 LIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQ---LLSAF-NSF 528 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HHH
Confidence 11122345566666666666666665567778888999999999999998777766555444433321 11111 111
Q ss_pred HHHHHHHHHHHHHHHHhHhccccc-CCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000711 341 LLKYLGATVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVI 419 (1338)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~~~ 419 (1338)
+.......+ .++. +++... .+..+.|. +++ +..++..+..++..+...+..+.++..+.+|+.++++.
T Consensus 529 ~~~~~~~~~-~~~~----fg~~~v~~~~lt~g~--vf~----~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~ 597 (1495)
T PLN03232 529 ILNSIPVVV-TLVS----FGVFVLLGGDLTPAR--AFT----SLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLS 597 (1495)
T ss_pred HHHHHHHHH-HHHH----HHHHHHhCCCCCHHH--HHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 111111111 1111 111111 11224443 232 22344555667778888888999999999999999976
Q ss_pred hhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCC--CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC
Q 000711 420 SRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL 497 (1338)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~--~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~ 497 (1338)
+++..... .. .....+.++++|++|.|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|
T Consensus 598 ~~~~~~~~--~~------~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~ 669 (1495)
T PLN03232 598 EERILAQN--PP------LQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSH 669 (1495)
T ss_pred cccccccc--CC------cCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcc
Confidence 54321100 00 0011346999999999975 36899999999999999999999999999999999999999
Q ss_pred CccEEEeCCCCccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---c
Q 000711 498 VSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---N 574 (1338)
Q Consensus 498 ~~G~i~~~~~~~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~ 574 (1338)
++|.+.. ++++|+||||+||+|++||||||.|+.+ .+++++.++++.|+++++++.+|.++++ +
T Consensus 670 ~~G~i~~------~~~~Iayv~Q~p~Lf~gTIreNI~fg~~-------~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe 736 (1495)
T PLN03232 670 AETSSVV------IRGSVAYVPQVSWIFNATVRENILFGSD-------FESERYWRAIDVTALQHDLDLLPGRDLTEIGE 736 (1495)
T ss_pred cCCCEEE------ecCcEEEEcCccccccccHHHHhhcCCc-------cCHHHHHHHHHHhCCHHHHHhCCCCCCceecC
Confidence 9987642 3568999999999999999999999853 4678999999999999999999987665 4
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHH-Hc--cCCeEEEEecChhhHhhcceEEEccCCC
Q 000711 575 WGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKV-RA--MGTSCITISHRPALVAFHDVVLSLDGEG 651 (1338)
Q Consensus 575 ~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l-~~--~~~t~i~itH~~~~~~~~d~i~~l~~~g 651 (1338)
.|.+|||||||||+||||+|++|+|+||||||||||+++++++++.+ .. .++|+|+||||++.++.+|+|++|++ |
T Consensus 737 ~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~-G 815 (1495)
T PLN03232 737 RGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSE-G 815 (1495)
T ss_pred CCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeC-C
Confidence 68899999999999999999999999999999999999999998764 33 58999999999999999999999986 3
Q ss_pred ceEEeecCCCcccccccchhh-ccccc-cccchhhHHHHHHHHHhhcccccCCcccchhhhHHHhhCCCCCCCCCCCCcc
Q 000711 652 EWRVHDKRDGSSVVTKSGINM-IKSSE-TDRQSDAMAVEQAFVTAKKDSAFSNPKAQSYVSEVIAASPIADHNVPLPVFP 729 (1338)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1338)
. ..+.....+.......... ..... .+.........+.. ............. ... ...............
T Consensus 816 ~-i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~ 887 (1495)
T PLN03232 816 M-IKEEGTFAELSKSGSLFKKLMENAGKMDATQEVNTNDENI---LKLGPTVTIDVSE--RNL--GSTKQGKRGRSVLVK 887 (1495)
T ss_pred E-EEEecCHHHHHhcchhHHHHHHhccccccccccccccccc---ccccccccccccc--ccc--ccccccccchhhhhh
Confidence 2 2332211110000000000 00000 00000000000000 0000000000000 000 000000000000000
Q ss_pred ccccCcccchhhH-HhHHHHhhccccch--hhHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHhcCHHHHHHHHHHHHH
Q 000711 730 QLKSAPRILPLRV-ADMFKVLVPTVFDK--QGAQLLAVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVL 806 (1338)
Q Consensus 730 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 806 (1338)
+..++.+...+.+ ..+++.....+... ....+...+...+..+|++.|....... .... ..+++++++
T Consensus 888 ~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~-------~~~~--~~~l~~y~~ 958 (1495)
T PLN03232 888 QEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTPK-------SYSP--GFYIVVYAL 958 (1495)
T ss_pred HHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC-------CCCc--chHHHHHHH
Confidence 0011111111111 11111110000000 0000111122234567777775432100 0001 113344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHh
Q 000711 807 QSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKP 885 (1338)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~-~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~ 885 (1338)
.+++..+..+...++....+.+...+++++++++.++. +.||+..+ .+++.+|+++|++.++..++..+..++..
T Consensus 959 l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~----~G~ilnr~s~Di~~id~~l~~~~~~~~~~ 1034 (1495)
T PLN03232 959 LGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNP----TGRVINRFSKDIGDIDRNVANLMNMFMNQ 1034 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCC----chHHHHHhHhhHHHHHHHHHHHHHHHHHH
Confidence 44444444444455556667777888888888888886 47887433 46689999999999999887766555443
Q ss_pred HHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccc----hHHHHHHHHhhHHHhhhcCChH
Q 000711 886 SVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGT----FRFMHERLRAHAESVAFFGGGA 961 (1338)
Q Consensus 886 ~~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~----~r~~~~~~~~~~e~i~~~~~~~ 961 (1338)
++.++.....+..+... .+++.+++++...+.... +.+..++.++.+.. ......+...+.++|++|+.++
T Consensus 1035 ~~~~i~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~ 1109 (1495)
T PLN03232 1035 LWQLLSTFALIGTVSTI--SLWAIMPLLILFYAAYLY---YQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYD 1109 (1495)
T ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHH
Confidence 32221111111111100 001111111111111111 11112222222222 1122233445678899998654
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-----HHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchh-hhchHHHHHHHHHH
Q 000711 962 REKAMIESRFRELLEHSLLLL-----KKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRAL-VSTQGELAHALRFL 1035 (1338)
Q Consensus 962 ~e~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~l~~~l~~~ 1035 (1338)
+ +.+.+.+..+...+.. ...|+. ....++. ..+.+.... +.+...+..+. ....+.++.++
T Consensus 1110 ~----~~~~~~~~~~~~~~~~~~~~~~~~wl~-~~~~~~~----~~~~~~~~~-~~v~~~~~~~~~~~~~~~~g~~~--- 1176 (1495)
T PLN03232 1110 R----MAKINGKSMDNNIRFTLANTSSNRWLT-IRLETLG----GVMIWLTAT-FAVLRNGNAENQAGFASTMGLLL--- 1176 (1495)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH----HHHHHHHHH-HHHHccccccccccchHHHHHHH---
Confidence 3 3344444444333222 122321 1111111 111111111 11111111000 00011112122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCC-Cccc
Q 000711 1036 ASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITP-SQKL 1114 (1338)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp-~~~~ 1114 (1338)
........++..+......+.....+++||.++.+.+++.+.. .....+++.||. +|.|+|+||+|+|+ +.++
T Consensus 1177 -~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~--~~~~~~~~~~p~---~g~I~f~nVsf~Y~~~~~~ 1250 (1495)
T PLN03232 1177 -SYTLNITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAI--IENNRPVSGWPS---RGSIKFEDVHLRYRPGLPP 1250 (1495)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc--ccCCCCCCCCCC---CCcEEEEEEEEEECCCCCc
Confidence 2223334455666666677777788999999998765432211 011123456886 68999999999885 4578
Q ss_pred cccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHh
Q 000711 1115 LARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQI 1192 (1338)
Q Consensus 1115 vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL 1192 (1338)
||+|+||+|+||||||||||||||||||+++|+|+|+|++|+|.|||+||+++ +.+|++|++|||||+||+|||||||
T Consensus 1251 vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL 1330 (1495)
T PLN03232 1251 VLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNI 1330 (1495)
T ss_pred ccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHc
Confidence 99999999999999999999999999999999999999999999999999988 5678899999999999999999999
Q ss_pred cCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhh
Q 000711 1193 IYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFF 1271 (1338)
Q Consensus 1193 ~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlL 1271 (1338)
++... ..|++++++++.++++++++++|+||||.+ +.|.+|||||||||||||||+
T Consensus 1331 ~~~~~-----------------------~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALL 1387 (1495)
T PLN03232 1331 DPFSE-----------------------HNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALL 1387 (1495)
T ss_pred CCCCC-----------------------CCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHH
Confidence 85321 246677888888888889999999999998 578999999999999999999
Q ss_pred cCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1272 HKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1272 r~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
|+|+|||||||||+||.++|+.|++.+++ .++|+|+||||++++..+|++++|++|+
T Consensus 1388 r~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1446 (1495)
T PLN03232 1388 RRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQ 1446 (1495)
T ss_pred hCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999998864 5999999999999999999999997764
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=3.6e-112 Score=1153.82 Aligned_cols=1110 Identities=15% Similarity=0.145 Sum_probs=676.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISE--NILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIH 184 (1338)
Q Consensus 107 l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~R~~lt~~l~ 184 (1338)
++..+++.++.+.+++..|.+.+.+++.+.+...+....++.. .++..++.+++.....|...+++.++|..+..
T Consensus 319 ~l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~--- 395 (1522)
T TIGR00957 319 FLMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMAPDWQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMG--- 395 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 4445566777888888899999999887765433322111111 11111112223333455677778886665554
Q ss_pred HHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhchhhHHHHH-HHHHHHHH
Q 000711 185 TRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWI-LAYVLGAG 262 (1338)
Q Consensus 185 ~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~-l~~~~~~~ 262 (1338)
..|++.+.++...+++. .++..+++++|++++.+.. ..+..+...++..++..+.++ ..++...++ ++.+++..
T Consensus 396 -~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~-~~~~~~~~~~~~i~~~~~ll~--~~~g~~~l~~l~~~~~~~ 471 (1522)
T TIGR00957 396 -AVYRKALVITNSARKSSTVGEIVNLMSVDAQRFMDLA-TYINMIWSAPLQVILALYFLW--LNLGPSVLAGVAVMVLMV 471 (1522)
T ss_pred -HHHHHHHhCChhhcCCCCHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH--HHHhHHHHHHHHHHHHHH
Confidence 45566666676666554 5689999999999987743 334333334333333333332 222322222 22222223
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 263 TMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLL 342 (1338)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (1338)
.+..++++.+.+...+.++...+......++.++++.||+|++|+.+.+++++..++..+..++... ...+..+..
T Consensus 472 ~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~----~~~~~~~~~ 547 (1522)
T TIGR00957 472 PLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAY----LHAVGTFTW 547 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHH
Confidence 3334456666666555555555555667788889999999999999988777766555443322211 111111111
Q ss_pred HHHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 000711 343 KYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRE 422 (1338)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~~~~~~ 422 (1338)
......+. ++.+..|.. .....+++....++. .+++..+..++..+...+..+.+...+.+||.++++.+++
T Consensus 548 ~~~~~~~~-~~~f~~~~~---~~~~~~l~~~~~f~~----l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~ 619 (1522)
T TIGR00957 548 VCTPFLVA-LITFAVYVT---VDENNILDAEKAFVS----LALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEEL 619 (1522)
T ss_pred HHHHHHHH-HHHHHHHHH---hcCCCCcCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 10111111 111111110 000112222222222 2233344567888888889999999999999999875433
Q ss_pred ccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccE
Q 000711 423 LSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGH 501 (1338)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~ 501 (1338)
... . ..... ....+.+.++++|++|.|++ .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+
T Consensus 620 ~~~-~--~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~ 694 (1522)
T TIGR00957 620 EPD-S--IERRT--IKPGEGNSITVHNATFTWARDLPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGH 694 (1522)
T ss_pred ccc-c--ccccc--cCCCCCCcEEEEEeEEEcCCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcE
Confidence 211 0 00000 00011247999999999975 368999999999999999999999999999999999999999999
Q ss_pred EEeCCCCccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---cCCCC
Q 000711 502 IAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDE 578 (1338)
Q Consensus 502 i~~~~~~~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~ 578 (1338)
|.++| +|+||||+||++++|++|||.++.+ .+++++.++++.|++.++++.+|.++++ +.|.+
T Consensus 695 i~~~g-------~i~yv~Q~~~l~~~Ti~eNI~~g~~-------~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~ 760 (1522)
T TIGR00957 695 VHMKG-------SVAYVPQQAWIQNDSLRENILFGKA-------LNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVN 760 (1522)
T ss_pred EEECC-------EEEEEcCCccccCCcHHHHhhcCCc-------cCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCC
Confidence 99986 6999999999999999999999853 2456788899999999999998876544 46889
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc-----cCCeEEEEecChhhHhhcceEEEccCCCce
Q 000711 579 LSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA-----MGTSCITISHRPALVAFHDVVLSLDGEGEW 653 (1338)
Q Consensus 579 LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~-----~~~t~i~itH~~~~~~~~d~i~~l~~~g~~ 653 (1338)
||||||||++||||+|++|++++||||||+||+++++++++.+.+ .++|+|+|||+++.+..+|+|++|++ |.
T Consensus 761 LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~-G~- 838 (1522)
T TIGR00957 761 LSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSG-GK- 838 (1522)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecC-Ce-
Confidence 999999999999999999999999999999999999999998742 37899999999999999999999986 33
Q ss_pred EEeecCCCcccccccchh-hcc---ccccccc-hhh-------HHHHHHH-HH--h-h--cccccCC----cccchhhhH
Q 000711 654 RVHDKRDGSSVVTKSGIN-MIK---SSETDRQ-SDA-------MAVEQAF-VT--A-K--KDSAFSN----PKAQSYVSE 711 (1338)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~-~~~-------~~~~~~~-~~--~-~--~~~~~~~----~~~~~~~~~ 711 (1338)
..+............... ... ..+.... .+. ...+... .. . . ....... .........
T Consensus 839 i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (1522)
T TIGR00957 839 ISEMGSYQELLQRDGAFAEFLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQS 918 (1522)
T ss_pred EEeeCCHHHHHhcchhHHHHHHhhccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccc
Confidence 222211000000000000 000 0000000 000 0000000 00 0 0 0000000 000000000
Q ss_pred HHh-hCCCCCCCCCC-C---CccccccCcccchhhHHhHHHHhhccccchh-hH----HHHHHHHHHHHHHHHHHHHHhh
Q 000711 712 VIA-ASPIADHNVPL-P---VFPQLKSAPRILPLRVADMFKVLVPTVFDKQ-GA----QLLAVAFLVVSRTWISDRIASL 781 (1338)
Q Consensus 712 ~~~-~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~l~~~~~~~~~~~wl~~~~~~~ 781 (1338)
... .....+..... . ...+..+..+...+. .++.++....... .. .+....+..+..+|++.|....
T Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~---~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~ 995 (1522)
T TIGR00957 919 RHHGSSAELQKAEAKEETWKLMEADKAQTGQVELS---VYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDP 995 (1522)
T ss_pred ccccccccccccccccchhhhHHHHHHhcCcccHH---HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 000 00000000000 0 000000001111111 1111111110000 00 0011122235567777776421
Q ss_pred cchHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-cchhhcccCCCCCCc
Q 000711 782 NGTTVKYVLEQDKASFVRLIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDA 860 (1338)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~~-~ff~~~~~~~~~~~~ 860 (1338)
.. ..+......+++++++.+++..+..+...++....+.+...++|+++++++++.+ .||+.. ..+++
T Consensus 996 ~~-------~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~----~~G~i 1064 (1522)
T TIGR00957 996 MV-------NGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERT----PSGNL 1064 (1522)
T ss_pred cc-------cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccC----ChHHH
Confidence 10 0000001112334444444444444444455556677778888889998888864 788743 34668
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhHhHHHH-------HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHH
Q 000711 861 DQRITHDLEKLTTDLSGLVTGMVKPSVDI-------LWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSRE 933 (1338)
Q Consensus 861 ~~Rls~D~~~l~~~l~~~~~~~i~~~~~i-------~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (1338)
.+|+++|++.++..++..+..++..++.+ ++..|.+.++. ++++++++++. +. +.+..++.
T Consensus 1065 lnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~----~~~~~~~~~~~----~~----~~~~~r~~ 1132 (1522)
T TIGR00957 1065 VNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVII----PPLGLLYFFVQ----RF----YVASSRQL 1132 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH----HH----HHHHHHHH
Confidence 99999999999988886655554433222 22222221111 11111111111 11 11122232
Q ss_pred HHhccch----HHHHHHHHhhHHHhhhcCChHHHHHHHHHHHHHHHHHHHHH-----HHHHHHhhhhhHHHHhhhhhHHH
Q 000711 934 QQLEGTF----RFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLLL-----LKKKWLFGILDDFVTKQLPHNVT 1004 (1338)
Q Consensus 934 ~~le~~~----r~~~~~~~~~~e~i~~~~~~~~e~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1338)
++++... .....+...+.++|++|+.+.. +.+.+.+..+...+. ...+|+ +...+++... +.
T Consensus 1133 ~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~----f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~ 1203 (1522)
T TIGR00957 1133 KRLESVSRSPVYSHFNETLLGVSVIRAFEEQER----FIHQSDLKVDENQKAYYPSIVANRWL-AVRLECVGNC----IV 1203 (1522)
T ss_pred HHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH----HH
Confidence 3333221 1222333456788999986554 334444444433322 223333 2222222111 11
Q ss_pred HHHHHHHHHhhcccchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCcc
Q 000711 1005 WGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEIS 1084 (1338)
Q Consensus 1005 ~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~ 1084 (1338)
..+ ..+.+...+. .+.|.++.++.+. ..+..++..+......+.....+++||.++.+.+++.+. ....
T Consensus 1204 ~~~-~~~~v~~~~~----~~~g~l~~~l~~~----~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~--~~~~ 1272 (1522)
T TIGR00957 1204 LFA-ALFAVISRHS----LSAGLVGLSVSYS----LQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPW--QIQE 1272 (1522)
T ss_pred HHH-HHHHHHhcCC----CCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc--cccC
Confidence 111 1111111111 2355555555443 234456677777788888888999999999865443221 0111
Q ss_pred CCccCCCCCCCCCCceEEeeeEEeCCC-ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCC
Q 000711 1085 GSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQH 1163 (1338)
Q Consensus 1085 ~~~~~~wp~~~~~g~I~f~nV~f~yp~-~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~d 1163 (1338)
..++..||. +|.|+|+||+|+||+ .++||+|+||+|+||||||||||||||||||+++|+|||||++|+|.|||+|
T Consensus 1273 ~~~~~~wp~---~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1273 TAPPSGWPP---RGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLN 1349 (1522)
T ss_pred CCCCCCCCC---CCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEE
Confidence 224457886 689999999999975 4689999999999999999999999999999999999999999999999999
Q ss_pred Cccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhh
Q 000711 1164 IDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLER 1241 (1338)
Q Consensus 1164 I~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~ 1241 (1338)
|+++ +.+|++|++|||||+||+||||+||+ |.. +..|++++++++.+++++++++
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLd-p~~----------------------~~sdeei~~al~~a~l~~~I~~ 1406 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSGSLRMNLD-PFS----------------------QYSDEEVWWALELAHLKTFVSA 1406 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCccHHHHcC-ccc----------------------CCCHHHHHHHHHHcCcHHHHhh
Confidence 9998 56788999999999999999999997 432 1246677888888888889999
Q ss_pred hcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccc
Q 000711 1242 EEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFH 1318 (1338)
Q Consensus 1242 ~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~ 1318 (1338)
+|+||||.+ +.|.+|||||||||||||||||+|||||||||||+||.++|+.|++.+++ .++|||+||||++++..+
T Consensus 1407 lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~ 1486 (1522)
T TIGR00957 1407 LPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDY 1486 (1522)
T ss_pred CccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhC
Confidence 999999998 57899999999999999999999999999999999999999999998864 599999999999999999
Q ss_pred cceEEEecCC
Q 000711 1319 SLELRLIDGE 1328 (1338)
Q Consensus 1319 d~~l~l~~g~ 1328 (1338)
|++++|++|+
T Consensus 1487 DrIlVld~G~ 1496 (1522)
T TIGR00957 1487 TRVIVLDKGE 1496 (1522)
T ss_pred CEEEEEECCE
Confidence 9999998764
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=4.3e-107 Score=1099.69 Aligned_cols=1124 Identities=16% Similarity=0.141 Sum_probs=656.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLC---FLLSTMHSTSKYITGTLSLQFRKIVTKLI 183 (1338)
Q Consensus 107 l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~R~~lt~~l 183 (1338)
+++.+++.++..++.+..|.+.+.+++.+.+.+....+. ++..++++ ++.+++.....|+..+++.++|..+...+
T Consensus 246 ~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g-~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~~r~~L~~~i 324 (1560)
T PTZ00243 246 VWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRG-LGLVLTLFLTQLIQSVCLHRFYYISIRCGLQYRSALNALI 324 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666778888899999999999998875544321111 11111111 12223344466888899999888888777
Q ss_pred HHHHhccccccccccc---CCCCCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHH
Q 000711 184 HTRYFENMAYYKISHV---DGRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLG 260 (1338)
Q Consensus 184 ~~~~~~~~~~~~~~~~---d~~~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~ 260 (1338)
.++.++ .+.... +...++..+.++.|++++.+....+ ..+...++..++..+.|+....| .+++.++.+++
T Consensus 325 f~K~l~----ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~-~~l~~~Pl~li~~~~lL~~~lG~-~al~gv~vl~v 398 (1560)
T PTZ00243 325 FEKCFT----ISSKSLAQPDMNTGRIINMMSTDVERINSFMQYC-MYLWSSPMVLLLSILLLSRLVGW-CALMAVAVLLV 398 (1560)
T ss_pred HHHHHh----CChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHH
Confidence 766653 222222 1234677889999999988775433 33334444433333334332232 22222222222
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 261 AGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDF 340 (1338)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (1338)
...+..++++...+...+..+....--....++.++++.||+|++|+.+.+++++..++..+..++...... +..+
T Consensus 399 ~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~El~~l~~~~~~~~----~~~~ 474 (1560)
T PTZ00243 399 TLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARELRYLRDVQLARV----ATSF 474 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHH
Confidence 222333445554444333333333333456777789999999999999998887766555554433222211 1111
Q ss_pred HHHHHHHHHHHHHHHHh-HhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000711 341 LLKYLGATVAVILIIEP-FFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVI 419 (1338)
Q Consensus 341 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~~~ 419 (1338)
+.......+..+.+... ..++. .+.+. +++. ..++..+..++..+...+..+.++..+.+||.++++.
T Consensus 475 ~~~~~p~l~~~~~f~~y~~~g~~-----Lt~~~--vft~----laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~~fL~~ 543 (1560)
T PTZ00243 475 VNNATPTLMIAVVFTVYYLLGHE-----LTPEV--VFPT----IALLGVLRMPFFMIPWVFTTVLQFLVSIKRISTFLEC 543 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC-----CCHHH--HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 11111111111111100 11222 23332 2322 2334444457777777888889999999999999975
Q ss_pred hhhcc----c-cC-------CCC--C-----CC------------------C---------------CCCCcCCCCcEEE
Q 000711 420 SRELS----I-ED-------KSP--Q-----RN------------------G---------------SRNYFSEANYIEF 447 (1338)
Q Consensus 420 ~~~~~----~-~~-------~~~--~-----~~------------------~---------------~~~~~~~~~~i~~ 447 (1338)
++... . .+ ... . .+ . ........+.+.+
T Consensus 544 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (1560)
T PTZ00243 544 DNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPSPSVVV 623 (1560)
T ss_pred ccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccc
Confidence 43100 0 00 000 0 00 0 0000000123566
Q ss_pred EeEEEEcC---------------------------------------CCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHH
Q 000711 448 SGVKVVTP---------------------------------------TGNVLVENLTLKVEPGSNLLITGPNGSGKSSLF 488 (1338)
Q Consensus 448 ~~v~~~~~---------------------------------------~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl 488 (1338)
+|+++.+| +++++|+|+||+|++|++++|+||||||||||+
T Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsGKSTLL 703 (1560)
T PTZ00243 624 EDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSGKSTLL 703 (1560)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCcHHHHH
Confidence 66655422 235699999999999999999999999999999
Q ss_pred HHHcCCCCCCccEEEeCCCCccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCC
Q 000711 489 RVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYP 568 (1338)
Q Consensus 489 ~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 568 (1338)
++|+|+++|++|+|.++ ++|+||||+|+++++|++|||.++.. .+.+++.++++.++++++++.+|
T Consensus 704 ~~i~G~~~~~~G~i~~~-------~~i~yv~Q~~~l~~~Tv~enI~~~~~-------~~~~~~~~~~~~~~l~~~l~~l~ 769 (1560)
T PTZ00243 704 QSLLSQFEISEGRVWAE-------RSIAYVPQQAWIMNATVRGNILFFDE-------EDAARLADAVRVSQLEADLAQLG 769 (1560)
T ss_pred HHHhcCCCCCCcEEEEC-------CeEEEEeCCCccCCCcHHHHHHcCCh-------hhHHHHHHHHHHhhhHHHHHHhh
Confidence 99999999999999874 37999999999999999999999742 23456788899999999999987
Q ss_pred CCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHH---ccCCeEEEEecChhhHhhcc
Q 000711 569 PEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALVAFHD 642 (1338)
Q Consensus 569 ~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~---~~~~t~i~itH~~~~~~~~d 642 (1338)
.+..+ +.|.+|||||||||+||||++++|+++|||||||+||+++++++++.+. ..|+|+|+|||+++.+..+|
T Consensus 770 ~g~~t~i~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad 849 (1560)
T PTZ00243 770 GGLETEIGEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRAD 849 (1560)
T ss_pred ccchHHhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCC
Confidence 65443 4578999999999999999999999999999999999999988877542 24899999999999999999
Q ss_pred eEEEccCCCceEEeecCCCcccccccchhhcccccc-ccch-hhHHHHHHHHHhhcccccCCcccchhhhHHH-hhCC-C
Q 000711 643 VVLSLDGEGEWRVHDKRDGSSVVTKSGINMIKSSET-DRQS-DAMAVEQAFVTAKKDSAFSNPKAQSYVSEVI-AASP-I 718 (1338)
Q Consensus 643 ~i~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~ 718 (1338)
+|++|+++ .. ....... ................ .... +.....+........................ .... .
T Consensus 850 ~ii~l~~G-~i-~~~G~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (1560)
T PTZ00243 850 YVVALGDG-RV-EFSGSSA-DFMRTSLYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGA 926 (1560)
T ss_pred EEEEEECC-EE-EEecCHH-HHHhChHHHHHHHhhccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999863 22 2211110 0000000000000000 0000 0000000000000000000000000000000 0000 0
Q ss_pred CCCCCCCCCccccccCcccchhhHHhHHHHhhccccchhhHHHH----------HHHHHHHHHHHHHHHHHhhcchHHHH
Q 000711 719 ADHNVPLPVFPQLKSAPRILPLRVADMFKVLVPTVFDKQGAQLL----------AVAFLVVSRTWISDRIASLNGTTVKY 788 (1338)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~~~~~~~~~~wl~~~~~~~~~~~~~~ 788 (1338)
..+...........+..+..++.. ++.++. ..++... ...+..+..+|++.|......
T Consensus 927 ~~~~~~~~l~~~e~~~~g~v~~~~---y~~Y~~----~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~~----- 994 (1560)
T PTZ00243 927 ALDAAAGRLMTREEKASGSVPWST---YVAYLR----FCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSFK----- 994 (1560)
T ss_pred ccccccchhhhHHHHhcCcccHHH---HHHHHH----HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC-----
Confidence 000000000000000111112211 111111 1111110 111223455677766542110
Q ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-cchhhcccCCCCCCccchhHHH
Q 000711 789 VLEQDKASFVRLIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHD 867 (1338)
Q Consensus 789 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~~-~ff~~~~~~~~~~~~~~Rls~D 867 (1338)
.+...+ ++++++..++..+......+...........++|+.+++++++.+ .||+.. ..+++.+|+++|
T Consensus 995 ---~~~~~~---l~~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~----~~G~ilnR~s~D 1064 (1560)
T PTZ00243 995 ---LSAATY---LYVYLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTT----PLGRILNRFSRD 1064 (1560)
T ss_pred ---CCcccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCC----CccHHHHHHHhh
Confidence 011111 222222222222111111112222333345678888888888764 788844 346689999999
Q ss_pred HHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhcc----chHHH
Q 000711 868 LEKLTTDLSGLVTGMVKPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEG----TFRFM 943 (1338)
Q Consensus 868 ~~~l~~~l~~~~~~~i~~~~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~----~~r~~ 943 (1338)
++.++..++..+..++..++.++.....+...... .++++++++++...+.+ .+....++.++.+. .....
T Consensus 1065 i~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~-~~~~~i~~~~~~~~i~~----~~~~~~r~~~r~~~~~~s~l~s~ 1139 (1560)
T PTZ00243 1065 IDILDNTLPMSYLYLLQCLFSICSSILVTSASQPF-VLVALVPCGYLYYRLMQ----FYNSANREIRRIKSVAKSPVFTL 1139 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhcHHHHH
Confidence 99999888765555444333222111111111000 00001111111111111 12222333333222 22233
Q ss_pred HHHHHhhHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhh
Q 000711 944 HERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVS 1023 (1338)
Q Consensus 944 ~~~~~~~~e~i~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1023 (1338)
..+...+.++|++|+.+....+.+.+..+...+..........|......++...+...+. +...++. ..+.. ..
T Consensus 1140 ~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~--~~~~~~~-~~~~~--~~ 1214 (1560)
T PTZ00243 1140 LEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIA--LIGVIGT-MLRAT--SQ 1214 (1560)
T ss_pred HHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH-HhccC--CC
Confidence 3444557889999998776665555555555444333333333333333332211111111 1111111 00000 01
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCC-C---------------------
Q 000711 1024 TQGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGD-D--------------------- 1081 (1338)
Q Consensus 1024 ~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~-~--------------------- 1081 (1338)
+.|.++.++.+ ..+...++..+......+.....+++||.++.+..++++... .
T Consensus 1215 ~~g~l~~~l~~----a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1290 (1560)
T PTZ00243 1215 EIGLVSLSLTM----AMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVV 1290 (1560)
T ss_pred CHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccc
Confidence 23333333322 234455667777777788888899999999986432211000 0
Q ss_pred CccCCccCCCCCCCCCCceEEeeeEEeCCC-ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcC
Q 000711 1082 EISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKP 1160 (1338)
Q Consensus 1082 ~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~-~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~id 1160 (1338)
..+..++..||.....|.|+|+||+|+|++ .++||+|+||+|+||||||||||||||||||+++|+|||+|++|+|.||
T Consensus 1291 ~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~ID 1370 (1560)
T PTZ00243 1291 IEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVN 1370 (1560)
T ss_pred cccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEC
Confidence 000111223443223689999999999976 4679999999999999999999999999999999999999999999999
Q ss_pred CCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhh
Q 000711 1161 SQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYL 1238 (1338)
Q Consensus 1161 g~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~ 1238 (1338)
|+||+++ +.+|++|++|||||+||+||||+||+ |.. +..|++++++++.++++++
T Consensus 1371 G~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNId-p~~----------------------~~sdeeI~~Al~~a~l~~~ 1427 (1560)
T PTZ00243 1371 GREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVD-PFL----------------------EASSAEVWAALELVGLRER 1427 (1560)
T ss_pred CEEcccCCHHHHHhcceEECCCCccccccHHHHhC-ccc----------------------CCCHHHHHHHHHHCCChHH
Confidence 9999987 46788999999999999999999997 432 1246677888888888888
Q ss_pred hhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcC-CCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCC
Q 000711 1239 LEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHK-PKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPAL 1314 (1338)
Q Consensus 1239 i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~-p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~ 1314 (1338)
++++|+||||.+ +.|.+||||||||||||||||++ |+|||||||||+||.++|+.|++.+++ .++|+|+||||+++
T Consensus 1428 I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~t 1507 (1560)
T PTZ00243 1428 VASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHT 1507 (1560)
T ss_pred HhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHH
Confidence 899999999998 57899999999999999999996 899999999999999999999998764 59999999999999
Q ss_pred cccccceEEEecCC
Q 000711 1315 IPFHSLELRLIDGE 1328 (1338)
Q Consensus 1315 i~~~d~~l~l~~g~ 1328 (1338)
+..+|++++|++|+
T Consensus 1508 i~~~DrIlVLd~G~ 1521 (1560)
T PTZ00243 1508 VAQYDKIIVMDHGA 1521 (1560)
T ss_pred HHhCCEEEEEECCE
Confidence 99999999997764
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=6.1e-106 Score=1089.10 Aligned_cols=1116 Identities=16% Similarity=0.163 Sum_probs=658.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhH-HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 108 LALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPL-FFQ--LISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIH 184 (1338)
Q Consensus 108 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~R~~lt~~l~ 184 (1338)
++..++.++...+.+..|.+.+.+++.+...+.+. ... +++..++..++..++.....|....++.++|..+...+.
T Consensus 83 ~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy 162 (1490)
T TIGR01271 83 VFYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIY 162 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444456777788888888888888774322221 111 111111111122233444667778888887777766555
Q ss_pred HHHhcccccccccccCC-CCCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHH
Q 000711 185 TRYFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGT 263 (1338)
Q Consensus 185 ~~~~~~~~~~~~~~~d~-~~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~ 263 (1338)
+ +.+..+...+++ ..+...+++++|++++.+....+ ..+...++.++++.+.++....| ..++.++.+++...
T Consensus 163 ~----K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~lL~~~~G~-~~l~~l~v~~~~~~ 236 (1490)
T TIGR01271 163 K----KTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMGLIWELLEV-NGFCGLGFLILLAL 236 (1490)
T ss_pred H----HHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 4 455555555543 35688899999999988865543 23333344344444444333222 22222333333444
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 264 MMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLK 343 (1338)
Q Consensus 264 ~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (1338)
+..++++.+.+...+.++...+.-....++.++++.||+|++|+.+.+++++..++..+..++..... .+...+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~----~~~~~~~- 311 (1490)
T TIGR01271 237 FQACLGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLR----YFYSSAF- 311 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH-
Confidence 44556666666655555444444456778888999999999999998777765555544433322111 1111111
Q ss_pred HHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 000711 344 YLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSL-GTLSISSRRLNRLSGYADRIHELMVISRE 422 (1338)
Q Consensus 344 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l-~~l~~~~~~l~~~~~~~~ri~~~~~~~~~ 422 (1338)
+....+..++.+..|.. ....+.+. +++.+ +++..+..++ ..+...+..+.++..+.+||.++++.++.
T Consensus 312 ~~~~~~~~~~~f~~y~~----~~~~~~~~--~ft~l----al~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~ 381 (1490)
T TIGR01271 312 FFSGFFVVFLSVVPYAL----IKGIILRR--IFTTI----SYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEY 381 (1490)
T ss_pred HHHHHHHHHHHHHHHHH----hCCCcHHH--HHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 11111111111111110 11112322 22222 2222222243 24566677788899999999999975432
Q ss_pred ccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCC---------------------------------CCeeeeeeeEEEe
Q 000711 423 LSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT---------------------------------GNVLVENLTLKVE 469 (1338)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~---------------------------------~~~~l~~~sl~i~ 469 (1338)
.... . . .....++++|++|.|+. .+++|+|+||+|+
T Consensus 382 ~~~~-~----~------~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~ 450 (1490)
T TIGR01271 382 KTLE-Y----N------LTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLE 450 (1490)
T ss_pred cccc-c----c------CCCCceEEecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEEC
Confidence 1100 0 0 01124666777666632 1468999999999
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHH
Q 000711 470 PGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHG 549 (1338)
Q Consensus 470 ~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~ 549 (1338)
+||+++|+||||||||||+++|+|+++|++|+|.++| +|+||||+||++++|++|||.|+.. .+++
T Consensus 451 ~G~~~~I~G~~GsGKSTLl~~l~G~~~~~~G~i~~~g-------~iayv~Q~~~l~~~Ti~eNI~~g~~-------~~~~ 516 (1490)
T TIGR01271 451 KGQLLAVAGSTGSGKSSLLMMIMGELEPSEGKIKHSG-------RISFSPQTSWIMPGTIKDNIIFGLS-------YDEY 516 (1490)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECC-------EEEEEeCCCccCCccHHHHHHhccc-------cchH
Confidence 9999999999999999999999999999999999987 6999999999999999999999853 2345
Q ss_pred HHHHHHHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHH-Hc--
Q 000711 550 GMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKV-RA-- 623 (1338)
Q Consensus 550 ~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l-~~-- 623 (1338)
++.++++.|+|.++++.+|.++.+ +.|.+|||||||||+||||+|++|+++||||||||||+++++++++.+ .+
T Consensus 517 ~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~ 596 (1490)
T TIGR01271 517 RYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLM 596 (1490)
T ss_pred HHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh
Confidence 678889999999999998876544 357899999999999999999999999999999999999999999853 33
Q ss_pred cCCeEEEEecChhhHhhcceEEEccCCCceEEeecCCCcccccccch----------hh------------------cc-
Q 000711 624 MGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDKRDGSSVVTKSGI----------NM------------------IK- 674 (1338)
Q Consensus 624 ~~~t~i~itH~~~~~~~~d~i~~l~~~g~~~~~~~~~~~~~~~~~~~----------~~------------------~~- 674 (1338)
.++|+|+|||+++.+..||+|++|+++ .. ................ .. ..
T Consensus 597 ~~~tvilvtH~~~~~~~ad~ii~l~~g-~i-~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (1490)
T TIGR01271 597 SNKTRILVTSKLEHLKKADKILLLHEG-VC-YFYGTFSELQAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDG 674 (1490)
T ss_pred cCCeEEEEeCChHHHHhCCEEEEEECC-EE-EEEcCHHHHHhcChHHHHHHhcccccccccccccccccccccccccccc
Confidence 489999999999999999999999863 22 2211100000000000 00 00
Q ss_pred -c-----ccc-c----cchhh--H---------HH---------------------HHHHHHhh-------cc--ccc-C
Q 000711 675 -S-----SET-D----RQSDA--M---------AV---------------------EQAFVTAK-------KD--SAF-S 701 (1338)
Q Consensus 675 -~-----~~~-~----~~~~~--~---------~~---------------------~~~~~~~~-------~~--~~~-~ 701 (1338)
. .+. . ...+. . .. ........ .+ ... .
T Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (1490)
T TIGR01271 675 DSTVFSGPETIKQSFKQPPPEFAEKRKQSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEES 754 (1490)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhcccccccccccccccccccc
Confidence 0 000 0 00000 0 00 00000000 00 000 0
Q ss_pred Ccccch---------hhhH----HHhhC------------------C--C-----CCC-----C-CCCCC---cc-----
Q 000711 702 NPKAQS---------YVSE----VIAAS------------------P--I-----ADH-----N-VPLPV---FP----- 729 (1338)
Q Consensus 702 ~~~~~~---------~~~~----~~~~~------------------~--~-----~~~-----~-~~~~~---~~----- 729 (1338)
.+.... .... ..... . . ... . ...+. .+
T Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (1490)
T TIGR01271 755 LPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEE 834 (1490)
T ss_pred cccccccccccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhh
Confidence 000000 0000 00000 0 0 000 0 00000 00
Q ss_pred --------ccccCcccchhhHHhHHHHhhccccchh------hHHHHHHHHHHHHHHHHHHHHHhhc----chHHH----
Q 000711 730 --------QLKSAPRILPLRVADMFKVLVPTVFDKQ------GAQLLAVAFLVVSRTWISDRIASLN----GTTVK---- 787 (1338)
Q Consensus 730 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~~~~~~wl~~~~~~~~----~~~~~---- 787 (1338)
+..+..+...+ ..++.++....... ...++...+..+..+|++.|..... .....
T Consensus 835 ~~~~~~~~~e~~~~g~v~~---~vY~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~ 911 (1490)
T TIGR01271 835 DLKECFADERENVFETTTW---NTYLRYITTNRNLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSP 911 (1490)
T ss_pred hhhhhhhHHHHhhcCcccH---HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCc
Confidence 00000011111 12222222110000 0001111223356778877654210 00000
Q ss_pred ---H--HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-cchhhcccCCCCCCcc
Q 000711 788 ---Y--VLEQDKASFVRLIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDAD 861 (1338)
Q Consensus 788 ---~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~~-~ff~~~~~~~~~~~~~ 861 (1338)
+ ........+. +.+++..+++..++.++..++......+...++|.++++++++.+ .||+..+ .+++.
T Consensus 912 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~----~G~il 985 (1490)
T TIGR01271 912 DVQKPVIITPTSAYYI--FYIYVGTADSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMK----AGRIL 985 (1490)
T ss_pred cccccccccCcchhhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCC----hhHHH
Confidence 0 0000011111 122222222222223333344455566677788888888888864 7887543 45689
Q ss_pred chhHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchH
Q 000711 862 QRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFR 941 (1338)
Q Consensus 862 ~Rls~D~~~l~~~l~~~~~~~i~~~~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r 941 (1338)
+|+++|++.++..++..+..++..++.++.....+..+.+.. +++++++++..+++... +.+..++.++++...+
T Consensus 986 nRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l--~l~~~~l~~~~~~~~~~---~~~~~r~l~~~~~~~~ 1060 (1490)
T TIGR01271 986 NRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYI--FIAAIPVAVIFIMLRAY---FLRTSQQLKQLESEAR 1060 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHh
Confidence 999999999999888766555544333322211111111110 00111111111111111 1112233333332222
Q ss_pred ----HHHHHHHhhHHHhhhcCChHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhHHHHhhhhhHHHHHHH-HHHHHhh
Q 000711 942 ----FMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLL-LLKKKWLFGILDDFVTKQLPHNVTWGLS-LLYAMEH 1015 (1338)
Q Consensus 942 ----~~~~~~~~~~e~i~~~~~~~~e~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 1015 (1338)
....+...+.++|++|+.+....+.+.+..+........ ....+|+..... ++...+ ..++. +.++...
T Consensus 1061 s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~-~i~~~~----~~~~~~l~~~~~~ 1135 (1490)
T TIGR01271 1061 SPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQMRID-IIFVFF----FIAVTFIAIGTNQ 1135 (1490)
T ss_pred hHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH----HHHHHHHHHHHhc
Confidence 222333456789999998766655554444433322222 223344432222 211111 01111 1111110
Q ss_pred cccchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCC------------c
Q 000711 1016 KGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDE------------I 1083 (1338)
Q Consensus 1016 ~~~~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~------------~ 1083 (1338)
...|.++.++.+.. .+..++..+......+.....+++||.++.+.+++.+..... .
T Consensus 1136 -------~~~g~~g~~l~~~~----~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 1204 (1490)
T TIGR01271 1136 -------DGEGEVGIILTLAM----NILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIE 1204 (1490)
T ss_pred -------CCccHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccc
Confidence 12233443333322 223344555556666777778999999998765443211100 0
Q ss_pred cCCccCCCCCCCCCCceEEeeeEEeCCC-ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCC
Q 000711 1084 SGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQ 1162 (1338)
Q Consensus 1084 ~~~~~~~wp~~~~~g~I~f~nV~f~yp~-~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~ 1162 (1338)
...+++.||. .|.|+|+||+|+|++ .++||+|+||+|+||||||||||||||||||+++|+|+|+ .+|+|.|||+
T Consensus 1205 ~~~~~~~wp~---~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~ 1280 (1490)
T TIGR01271 1205 NPHAQKCWPS---GGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGV 1280 (1490)
T ss_pred cCCCCCCCCC---CCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCE
Confidence 1123456887 689999999998875 6889999999999999999999999999999999999998 7999999999
Q ss_pred CCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhh
Q 000711 1163 HIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLE 1240 (1338)
Q Consensus 1163 dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~ 1240 (1338)
||+++ +.+|++|++|||||+||+||||+||+ |.. +..|++++++++.++|+++++
T Consensus 1281 di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLd-p~~----------------------~~tdeei~~aL~~~~L~~~i~ 1337 (1490)
T TIGR01271 1281 SWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLD-PYE----------------------QWSDEEIWKVAEEVGLKSVIE 1337 (1490)
T ss_pred EcccCCHHHHHhceEEEeCCCccCccCHHHHhC-ccc----------------------CCCHHHHHHHHHHCCCHHHHH
Confidence 99988 46788999999999999999999996 432 124777889999999999999
Q ss_pred hhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCccc
Q 000711 1241 REEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPF 1317 (1338)
Q Consensus 1241 ~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~ 1317 (1338)
.+|+||||.+ +.|.+|||||||||||||||||+|||||||||||+||.++|+.|++.+++ .++|||+||||++++..
T Consensus 1338 ~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~ 1417 (1490)
T TIGR01271 1338 QFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLE 1417 (1490)
T ss_pred hCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHh
Confidence 9999999998 47889999999999999999999999999999999999999999998864 59999999999999999
Q ss_pred ccceEEEecCC
Q 000711 1318 HSLELRLIDGE 1328 (1338)
Q Consensus 1318 ~d~~l~l~~g~ 1328 (1338)
+|++++|++|+
T Consensus 1418 ~DrIlvL~~G~ 1428 (1490)
T TIGR01271 1418 CQQFLVIEGSS 1428 (1490)
T ss_pred CCEEEEEECCE
Confidence 99999997763
No 9
>KOG0060 consensus Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis) [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=2.7e-88 Score=772.42 Aligned_cols=629 Identities=38% Similarity=0.615 Sum_probs=545.1
Q ss_pred HHhhhhhhhcccchhhhhhccccCCCCcccccCCCCCCCcccccc-cccccccccccccccChHHHHHHHHHHhcccCch
Q 000711 24 ILLASGILVAGGTAAYLKSRFSSKKPDAFGHYNGLGDSERKPDKA-VANRSNIKKANQKKGGLKSLQVLAAILLSEMGKM 102 (1338)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~~~p~~~~~ 102 (1338)
+++++++..+|++++|+..+..+..++++. ++.....++..+. ...+..+.|.+..+..++++.+++++++|...++
T Consensus 2 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~t~~~~~~~~~~~~~k~~~~~~f~~k~~~ilkil~p~~~~~ 79 (659)
T KOG0060|consen 2 LAITAKVCAPGLVLRHASFLLAKLYIGSFR--GNPRFRSETCMSLAGKKQGAKAKASLDKVFFQKFLQILKILFPSTFSS 79 (659)
T ss_pred CcccccccCchhHHHHHHHHHHHhhhhhcc--CCCcccccchhhccCCCCCccchhhhhHHHHHHHHHHHHHhccCcccc
Confidence 467889999999999999999999999996 4444433433332 2333333455555666788999999999998877
Q ss_pred hHHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 103 GARD-LLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTK 181 (1338)
Q Consensus 103 ~~~~-l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~R~~lt~ 181 (1338)
++.+ +++++++++..+..++.++.+.+.||.++++++.+.|.+.+..+++.+.+.+.+++..+|..+.+.++||+++|+
T Consensus 80 ~~~~l~l~~~~l~~~~~~~~y~~~~~~~~~y~al~~kd~~~F~~~~~~~~~~~~~~s~~~a~~ky~~~~L~Lr~R~~ltk 159 (659)
T KOG0060|consen 80 QTALLLLALVALTLLTTADVYMIGNIPTKFYVALINKDAELFKRLLFKYVLLIPGISLLNALLKFTTNELYLRFRKNLTK 159 (659)
T ss_pred HHHHHHHHHHHHHHHHHhHhheecccchhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHHH
Confidence 7544 455667778888889999999999999999999999999998888888888899999999999999999999999
Q ss_pred HHHHHHhcccccccccccCCCCCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHH
Q 000711 182 LIHTRYFENMAYYKISHVDGRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGA 261 (1338)
Q Consensus 182 ~l~~~~~~~~~~~~~~~~d~~~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~ 261 (1338)
.+++.||++..||+++..|.+++|||||+++|+++||..+++++++++.+++++++|+|.++...+|..+++++.|++++
T Consensus 160 ~lh~~Y~k~~~yYkis~~d~ridNPDQrltqDv~kf~~~l~sl~s~l~~a~~di~~Y~~~l~~s~g~~gp~~i~~Yf~~~ 239 (659)
T KOG0060|consen 160 YLHRLYFKGFTYYKLSNLDDRIDNPDQRLTQDVEKFCRQLSSLYSNLLKAPFDLVYYTFRLFESAGWLGPVSIFAYFLIG 239 (659)
T ss_pred HHHHHHhccceEEEecccccccCChHHHHhHHHHHHHHHHHHHHHhhhccceeeehhhhHHhhhcCcccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 262 GTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFL 341 (1338)
Q Consensus 262 ~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (1338)
+++...+.+|+.+++.+||+.|||||+.|+++|.|+|.||||+|++.|..+.+++|+++.++.+..+.+.++++++++++
T Consensus 240 ~vi~~~L~~pI~~l~~~qeklEGdfRy~h~rlr~NaE~iAFY~g~~~E~~~~~~~f~~Lv~~l~~l~~~r~~l~f~~n~~ 319 (659)
T KOG0060|consen 240 TVINKTLRGPIVKLTVEQEKLEGDFRYKHSRLRVNAEEIAFYRGGQVEHQRTDQRFRNLVQHLRELMSFRFWLGFIDNIF 319 (659)
T ss_pred HHHHhhhccchhHHHHHHHHhhcchhhheeeeeecchhhhhhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 000711 342 LKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISR 421 (1338)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~~~~~ 421 (1338)
. |++.+++++++..|+|.|+.. +..+ ...+...+.....+++.++++++.+....+.+.++.++++||.|+++...
T Consensus 320 ~-Ylg~ilsy~vi~~p~Fs~h~y-~~~s--~aEL~~~i~~na~~~i~Li~~f~~l~~~~~~ls~lsGyt~Ri~el~~~l~ 395 (659)
T KOG0060|consen 320 D-YLGGILSYVVIAIPFFSGHVY-DDLS--PAELSGLISNNAFVFIYLISAFGRLVDLSRDLSRLSGYTHRIGELMEVLD 395 (659)
T ss_pred H-HHHhhheeeEEeeeeeccccc-CCcC--HHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHH
Confidence 6 999999999999999988743 3222 23445555566677888889999999999999999999999999987655
Q ss_pred hccccC-----------CC----CCCCCCCCCcCCCCcEEEEeEEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCcHH
Q 000711 422 ELSIED-----------KS----PQRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKS 485 (1338)
Q Consensus 422 ~~~~~~-----------~~----~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~~sl~i~~G~~~~i~G~sGsGKS 485 (1338)
+..... +. ...++.....+.++.|+|++|++..|+ +..+++|+||+|+.|+.++|+||||||||
T Consensus 396 d~~~~~~~~~~~~~~~~E~~~~l~~~~G~~~~~~~Dn~i~~e~v~l~tPt~g~~lie~Ls~~V~~g~~LLItG~sG~GKt 475 (659)
T KOG0060|consen 396 DLSSGSQECTMEEEELGEAEWGLSLPPGSGKAEPADNAIEFEEVSLSTPTNGDLLIENLSLEVPSGQNLLITGPSGCGKT 475 (659)
T ss_pred HhccCCcchhhhhhhhhhhhhccCCCCCCcccccccceEEeeeeeecCCCCCceeeeeeeeEecCCCeEEEECCCCCchh
Confidence 433111 00 001111222334578999999999998 77888999999999999999999999999
Q ss_pred HHHHHHcCCCCCCccEEEeCCCCccccccEEEEecCCCCCCCCHHHHhcCCCCCCc-ccCCCCHHHHHHHHHHcCCchHH
Q 000711 486 SLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEYLL 564 (1338)
Q Consensus 486 TLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~ 564 (1338)
+|+|+++|+||..+|++..+.... .+.+.||||+||+..||+||++.||..... ..+..+|+++.+.|+.++|.+++
T Consensus 476 SLlRvlggLWp~~~G~l~k~~~~~--~~~lfflPQrPYmt~GTLRdQvIYP~~~~~~~~~~~~d~~i~r~Le~v~L~hl~ 553 (659)
T KOG0060|consen 476 SLLRVLGGLWPSTGGKLTKPTDGG--PKDLFFLPQRPYMTLGTLRDQVIYPLKAEDMDSKSASDEDILRILENVQLGHLL 553 (659)
T ss_pred HHHHHHhcccccCCCeEEecccCC--CCceEEecCCCCccccchhheeeccCccccccccCCCHHHHHHHHHHhhhhhHH
Confidence 999999999999999999876421 246999999999999999999999965432 23457899999999999999999
Q ss_pred hcCCC-C--ccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHccCCeEEEEecChhhHhhc
Q 000711 565 DRYPP-E--KEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFH 641 (1338)
Q Consensus 565 ~~~~~-~--~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~itH~~~~~~~~ 641 (1338)
++... + .+.+|.+.||+|||||+|+||.+|++|++.||||+|||+|.+.|..+++.+++.|+|.|.|+||.++.++|
T Consensus 554 ~r~ggld~~~~~dW~dvLS~GEqQRLa~ARLfy~kPk~AiLDE~TSAv~~dvE~~~Yr~~r~~giT~iSVgHRkSL~kfH 633 (659)
T KOG0060|consen 554 EREGGLDQQVDWDWMDVLSPGEQQRLAFARLFYHKPKFAILDECTSAVTEDVEGALYRKCREMGITFISVGHRKSLWKFH 633 (659)
T ss_pred HHhCCCCchhhccHHhhcCHHHHHHHHHHHHHhcCCceEEeechhhhccHHHHHHHHHHHHHcCCeEEEeccHHHHHhhh
Confidence 99743 4 33479999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEccCCCceEEeecCC
Q 000711 642 DVVLSLDGEGEWRVHDKRD 660 (1338)
Q Consensus 642 d~i~~l~~~g~~~~~~~~~ 660 (1338)
|.++.|+++|+|.++...+
T Consensus 634 d~~L~~~g~g~w~~~~I~~ 652 (659)
T KOG0060|consen 634 DYVLRMDGRGSWRFHQIDD 652 (659)
T ss_pred hEEEEecCCCceEEEEech
Confidence 9999999999999986654
No 10
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=3.5e-77 Score=707.52 Aligned_cols=543 Identities=28% Similarity=0.479 Sum_probs=466.4
Q ss_pred HHHHHHHHhcccCch----hHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHH
Q 000711 88 LQVLAAILLSEMGKM----GARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHST 163 (1338)
Q Consensus 88 l~~l~~~~~p~~~~~----~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1338)
+++++.+.+|+|.++ ...++++++++.++.+..++.++.|++.||++|..+|...|++.+..|.+++++...+.+.
T Consensus 26 ~~qfw~i~r~yw~~~~~~~~~~l~~~i~~~~l~~v~~~v~~~~w~~~~~~aL~~~d~~~f~~~l~~f~~ia~~~v~~~v~ 105 (604)
T COG4178 26 GRQFWMIARAYWASPVRKRAWLLLIGILALILLSVRGQVLLNDWNGPFYNALARRDLAAFWQQLQVFAIIAGLLVLLNVA 105 (604)
T ss_pred HHHHHHHhhhhccCccchHHHHHHHHHHHHHHHHhheeeeeHhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666666665532 2344455666778888889999999999999999999999999988888877777778899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccC--CCCCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 000711 164 SKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVD--GRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWR 241 (1338)
Q Consensus 164 ~~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d--~~~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~ 241 (1338)
..|+++++.++||+|||+++.++||++..||++.+.+ ..+|||||||++|+..|++...++..+++.++++.+.|+..
T Consensus 106 ~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~i 185 (604)
T COG4178 106 QTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGI 185 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987 45799999999999999999999999999999999998877
Q ss_pred HHH-------------hchhhHHHHH-HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChH
Q 000711 242 LCS-------------YASPKYVFWI-LAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGEN 307 (1338)
Q Consensus 242 l~~-------------~~~~~l~~~~-l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~ 307 (1338)
||. +.+|++++|+ ++|++.++++++++||++.+++.+++++||+||+.+.++++|+|+|++|+||+
T Consensus 186 Lw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE~ 265 (604)
T COG4178 186 LWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGEK 265 (604)
T ss_pred HHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCcH
Confidence 761 4578888886 56888888888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHH
Q 000711 308 KEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVII 387 (1338)
Q Consensus 308 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~ 387 (1338)
.|+++++++|..+.+++++...+...+..++..+. ++...+++++.+|.||.|.+ ++|..+. ..+.+.
T Consensus 266 ~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~-~~s~v~P~li~ap~~f~g~i-----~~G~lmq------a~~aF~ 333 (604)
T COG4178 266 VERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYG-WLSVVLPILIAAPRYFSGQI-----TFGGLMQ------AVGAFG 333 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhh-HHHHHHHHHhccHhhhcCcC-----hHHHHHH------HHHHHH
Confidence 99999999999999999999988888888888775 44557777777888998887 5665433 234566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCC--CCcEEEEeEEEEcCCCCeeeeeee
Q 000711 388 SLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSE--ANYIEFSGVKVVTPTGNVLVENLT 465 (1338)
Q Consensus 388 ~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~v~~~~~~~~~~l~~~s 465 (1338)
.+..+++++...+.++..+.+...|+.++.+..+....+..............+ ...|+++|+++..|+++++++++|
T Consensus 334 ~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~~~ll~~l~ 413 (604)
T COG4178 334 QVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDGQTLLSELN 413 (604)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCCCeeeccce
Confidence 777889999999999999999999999987654422111111111000001111 467999999999999999999999
Q ss_pred EEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCC
Q 000711 466 LKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEP 545 (1338)
Q Consensus 466 l~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~ 545 (1338)
|++++||.+.|.||||||||||+|+|+|+||..+|+|.+|. ...+.|+||+||++.||+||.|+||.... .
T Consensus 414 ~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----~~~~lflpQ~PY~p~GtLre~l~YP~~~~----~ 484 (604)
T COG4178 414 FEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----DSALLFLPQRPYLPQGTLREALCYPNAAP----D 484 (604)
T ss_pred eeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----CCceEEecCCCCCCCccHHHHHhCCCCCC----C
Confidence 99999999999999999999999999999999999999984 24699999999999999999999997642 3
Q ss_pred CCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--
Q 000711 546 LTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA-- 623 (1338)
Q Consensus 546 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~-- 623 (1338)
.+|+++.++|.+|+|+++.+++ +.+.+|...||+|||||||+||.++++|++++|||+|||||+++|..+++.+++
T Consensus 485 ~~d~~l~~vL~~vgL~~L~~rl--~~~~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~l~~~l 562 (604)
T COG4178 485 FSDAELVAVLHKVGLGDLAERL--DEEDRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQLLKEEL 562 (604)
T ss_pred CChHHHHHHHHHcCcHHHHHHH--hccCcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHHHHhhC
Confidence 7899999999999999999994 555679999999999999999999999999999999999999999999999998
Q ss_pred cCCeEEEEecChhhHhhcceEEEccCCCce
Q 000711 624 MGTSCITISHRPALVAFHDVVLSLDGEGEW 653 (1338)
Q Consensus 624 ~~~t~i~itH~~~~~~~~d~i~~l~~~g~~ 653 (1338)
.+.|+|.|+||..+..+|++.+.+++.+++
T Consensus 563 p~~tvISV~Hr~tl~~~h~~~l~l~~~~~~ 592 (604)
T COG4178 563 PDATVISVGHRPTLWNFHSRQLELLDDAGG 592 (604)
T ss_pred CCCEEEEeccchhhHHHHhhheeecccccc
Confidence 699999999999999999999999876655
No 11
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.8e-75 Score=688.30 Aligned_cols=469 Identities=20% Similarity=0.252 Sum_probs=344.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHH
Q 000711 801 IGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVT 880 (1338)
Q Consensus 801 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~ 880 (1338)
.+++++.+++.++..+++.+...++..+.|..+++++++ ++..|||.. +.+|+.+|++.|...+...+...+.
T Consensus 195 ~~l~~~~a~~~~~r~~~~~~a~~rv~~rlR~~lF~sil~---QdiaFFD~n----ktGeL~SRLtsD~~~vs~svs~nls 267 (716)
T KOG0058|consen 195 LGLFLIGALANAIRGGLLQYAGERVVARLRTDLFRSLLR---QDIAFFDEN----KTGELISRLTSDTQIVSNSVSQNLS 267 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhhhccC----CccHHHhhhhhhHHHHHHHHHHHHH
Confidence 344555555666666677777777776666666655444 246899853 4688999999999988777766555
Q ss_pred HhhHh-------HHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHH
Q 000711 881 GMVKP-------SVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAES 953 (1338)
Q Consensus 881 ~~i~~-------~~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~ 953 (1338)
..+.+ +..+++.+|+|++++. +.++++.+ ....+++.+.+++.+.|+.-+......++...+.++
T Consensus 268 ~~lR~~~~~~g~~~~M~~~S~~Ltlv~~-----i~~P~v~~---~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rT 339 (716)
T KOG0058|consen 268 DGLRNLVQGFGGLGFMFSLSWRLTLVTL-----IVVPIVAL---VAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRT 339 (716)
T ss_pred HHHHHHHHHHHhHHHHhhhhHHHHHHHH-----HHhcHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 44433 2344678999987652 11111111 122233335556666677666666666677778899
Q ss_pred hhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHH
Q 000711 954 VAFFGGGAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALR 1033 (1338)
Q Consensus 954 i~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~ 1033 (1338)
|+.|+.|..|..++.+..++.++-.++.......+.....+. ........++|+..+..... .+.|.+..++.
T Consensus 340 VRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~~~~~-----~~~~~~siL~~Gg~Lv~~g~--mt~g~L~sFll 412 (716)
T KOG0058|consen 340 VRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGSTNLL-----GNLAVLSILFYGGHLVLTGS--LTSGALSSFLL 412 (716)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhHHHHH-----HhHHHHHHHHhccchhhcCc--cchhHHHHHHH
Confidence 999999999988877777666665443332222111111111 11222334555543322221 24666655554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCCcc
Q 000711 1034 FLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQK 1113 (1338)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~~~ 1113 (1338)
|.. +...++..+...+..+.+..+|.+|++|++++.+..+.. +..-|. ..+|.|+|+||+|.||+.|
T Consensus 413 Y~~----~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~--------G~~~p~-~~~G~IeF~~VsFaYP~Rp 479 (716)
T KOG0058|consen 413 YQV----QLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLT--------GTLAPD-HLQGVIEFEDVSFAYPTRP 479 (716)
T ss_pred HHH----HHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCC--------Cccccc-cccceEEEEEeeeecCCCC
Confidence 432 334466677777888888889999999999875443221 111132 3579999999999999854
Q ss_pred --ccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHH
Q 000711 1114 --LLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLR 1189 (1338)
Q Consensus 1114 --~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIR 1189 (1338)
+||+|+||+|+|||+||+||||||||||++++|+|||||++|+|++||+||+++ .++|++|++|.|||+||+|||+
T Consensus 480 ~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~ 559 (716)
T KOG0058|consen 480 DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIR 559 (716)
T ss_pred CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHHHeeeeeccceeecccHH
Confidence 699999999999999999999999999999999999999999999999999999 4778899999999999999999
Q ss_pred HHhcCCC--chHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHH
Q 000711 1190 DQIIYPL--SREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGM 1266 (1338)
Q Consensus 1190 eNL~~p~--~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlai 1266 (1338)
|||.|+. .++|++..|+++|++|+||. ..|+||||.+ ++|.+|||||||||||
T Consensus 560 eNI~YG~~~~t~e~i~~AAk~ANah~FI~------------------------~~p~gY~T~VGEkG~qLSGGQKQRIAI 615 (716)
T KOG0058|consen 560 ENIAYGLDNATDEEIEAAAKMANAHEFIT------------------------NFPDGYNTVVGEKGSQLSGGQKQRIAI 615 (716)
T ss_pred HHHhcCCCCCCHHHHHHHHHHhChHHHHH------------------------hCccccccccCCccccccchHHHHHHH
Confidence 9999965 35777788999988766543 3467999998 5899999999999999
Q ss_pred HHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1267 ARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1267 ARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
||||+|||+||||||||||||+++|..+|+.+.. .++|||+|||||+||+-+|++.++++|.
T Consensus 616 ARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~ 679 (716)
T KOG0058|consen 616 ARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGR 679 (716)
T ss_pred HHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCe
Confidence 9999999999999999999999999999998753 5899999999999999999999997653
No 12
>KOG0064 consensus Peroxisomal long-chain acyl-CoA transporter, ABC superfamily [Lipid transport and metabolism]
Probab=100.00 E-value=3.2e-74 Score=645.12 Aligned_cols=573 Identities=34% Similarity=0.580 Sum_probs=488.9
Q ss_pred ccccChHHHHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHH
Q 000711 80 QKKGGLKSLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLST 159 (1338)
Q Consensus 80 ~~~~~~~~l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 159 (1338)
.++-.++++..|+++++|...|+++.++.+..++++.+|++|++++.+.|.++..++.++...|...++.|+++++++++
T Consensus 93 ~N~~f~k~l~~L~Kilip~vfc~e~gll~~hs~~Li~RTfLSl~VA~LdGqlVk~Ivrk~~r~F~~~LlkW~liaiPAtF 172 (728)
T KOG0064|consen 93 KNSQFLKRLNVLSKILIPTVFCKETGLLTAQSFFLISRTFLSLFVAKLDGQLVKNIVRKRGRQFLWDLLKWFLIAIPASF 172 (728)
T ss_pred cCHHHHHHHHHHHHHhcchHHHHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHhhhccHHH
Confidence 33344677889999999999999999899999999999999999999999999999999999998888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCCCCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000711 160 MHSTSKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYT 239 (1338)
Q Consensus 160 ~~~~~~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~ 239 (1338)
+++..+|++..+++.+|.+++++..+.||++.+||++++.|+++.|+||++|+||..|++.++.+++++.+++++.++++
T Consensus 173 vNS~Iryle~klaLafrtrL~~h~y~~Y~snqTyY~Vsn~d~~i~n~D~sLTeDI~~Fs~svahLysnLtKP~lDl~l~s 252 (728)
T KOG0064|consen 173 VNSAIRYLESKLALAFRTRLTRHAYDMYLSNQTFYKVSNLDSVIENADNSLTEDIAKFSDSVAHLYSNLTKPVLDLILIS 252 (728)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEecccchhcCccchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHhc-hhh--HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHH
Q 000711 240 WRLCSYA-SPK--YVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQK 316 (1338)
Q Consensus 240 ~~l~~~~-~~~--l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~ 316 (1338)
+.|+... +.+ -...+...+.+.+.+++.++|+++++..++..+++.+|+.|+++.+|.|.||||+|.+.|.+++++.
T Consensus 253 ~~L~~s~~s~g~~~~~~~~lvv~lTa~iLr~~sP~Fg~Lv~eeA~r~g~lr~~Hs~ii~NsEEIAfy~GhkvE~~ql~~s 332 (728)
T KOG0064|consen 253 FTLLDSATSVGAAGITLAGLVVYLTAFILRAVSPKFGKLVAEEAARKGYLRYLHSNIITNSEEIAFYGGHKVELTQVDES 332 (728)
T ss_pred HHHHhhhccccccchhhhhhHHHHHHHHHHHhCCchhhHHHHHHhhccHHHHHHHHHhccHHHHHhhcccHHHHHHHHHH
Confidence 7775321 111 1111222222455678889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccccCCc----chhhHHHHHHHHHHHHHHHHHHHHH
Q 000711 317 FKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDT----STLGRAKMLSNLRYHTSVIISLFQS 392 (1338)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~ 392 (1338)
|+.+...+..+.+...|+.+...|+.+|.+...+++++..|++.+....+. ...+.. ....+...-..+.+...+
T Consensus 333 y~~L~~qm~li~k~r~~YiMleqF~mKYvWsg~GlvmvsiPI~~~t~~s~~~~~~~e~~~s-rt~~f~t~r~LL~saAdA 411 (728)
T KOG0064|consen 333 YNRLVEQMNLIFKVRLWYIMLEQFVMKYTWSGTGLVMVSIPILTSTLASEGTLQLSEEGNS-RTKEFITNRRLLLSAADA 411 (728)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeeeecccCCCCcccccccchh-HHHHHHHHHHHHHHHHHH
Confidence 999999998899999999999999999999999998888887655442211 111111 111122234567778889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccC--C-CC-CC----------CCC----CCCcCCCCcEEEEeEEEEc
Q 000711 393 LGTLSISSRRLNRLSGYADRIHELMVISRELSIED--K-SP-QR----------NGS----RNYFSEANYIEFSGVKVVT 454 (1338)
Q Consensus 393 l~~l~~~~~~l~~~~~~~~ri~~~~~~~~~~~~~~--~-~~-~~----------~~~----~~~~~~~~~i~~~~v~~~~ 454 (1338)
+..++.+++.++++.++..|++++++..++..... . .. +. +.. .........|.++||.+..
T Consensus 412 ieRlMssyKeItqLaGyt~Rv~~mf~v~~dv~~g~~~k~~v~e~~~~~~~~e~r~s~~l~~~~~i~~~~gI~lenIpvIt 491 (728)
T KOG0064|consen 412 IERLMSSYKEITQLAGYTNRVFTMFSVLHDVHKGNYNKTAVPEILSSRTIDESRNSNPLPTTDAIRNFNGIILENIPVIT 491 (728)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcccccccccCchhhccCccccccCCcCCccchhhcccceEEecCceec
Confidence 99999999999999999999998776544432110 0 00 00 000 0001123469999999999
Q ss_pred CCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCccccccEEEEecCCCCCCCCHHHHhc
Q 000711 455 PTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLI 534 (1338)
Q Consensus 455 ~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~l~~~tl~eni~ 534 (1338)
|.++.++..+||+|++|-.++|+||||||||+|+|+|.|+||...|...+|.. .+|.|+||+||+--||+||+|.
T Consensus 492 P~~~vvv~~Ltf~i~~G~hLLItGPNGCGKSSLfRILggLWPvy~g~L~~P~~-----~~mFYIPQRPYms~gtlRDQII 566 (728)
T KOG0064|consen 492 PAGDVLVPKLTFQIEPGMHLLITGPNGCGKSSLFRILGGLWPVYNGLLSIPRP-----NNIFYIPQRPYMSGGTLRDQII 566 (728)
T ss_pred cCcceeecceeEEecCCceEEEECCCCccHHHHHHHHhccCcccCCeeecCCC-----cceEeccCCCccCcCcccceee
Confidence 99999999999999999999999999999999999999999999999999863 4699999999999999999999
Q ss_pred CCCCCCcc-cCCCCHHHHHHHHHHcCCchHHhcCC-CCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHH
Q 000711 535 YPLTSDQE-VEPLTHGGMVELLKNVDLEYLLDRYP-PEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTD 612 (1338)
Q Consensus 535 ~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~ 612 (1338)
||...++. ....+|.++..+|+.+.|++.+++-. .+...+|-+.||||||||+++||.+||+|++.+|||||||+.++
T Consensus 567 YPdS~e~~~~kg~~d~dL~~iL~~v~L~~i~qr~~g~da~~dWkd~LsgGekQR~~mARm~yHrPkyalLDEcTsAvsid 646 (728)
T KOG0064|consen 567 YPDSSEQMKRKGYTDQDLEAILDIVHLEHILQREGGWDAVRDWKDVLSGGEKQRMGMARMFYHRPKYALLDECTSAVSID 646 (728)
T ss_pred cCCcHHHHHhcCCCHHHHHHHHHHhhHHHHHHhccChhhhccHHhhccchHHHHHHHHHHHhcCcchhhhhhhhcccccc
Confidence 99875433 23578999999999999999998854 35556899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCeEEEEecChhhHhhcceEEEccCCCceEEeec
Q 000711 613 MEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDK 658 (1338)
Q Consensus 613 ~~~~i~~~l~~~~~t~i~itH~~~~~~~~d~i~~l~~~g~~~~~~~ 658 (1338)
.|..+++..+..|.+.|.||||++++++|.+.+..+++|+|..+.-
T Consensus 647 vE~~i~~~ak~~gi~llsithrpslwk~h~~ll~~dg~g~~q~~~l 692 (728)
T KOG0064|consen 647 VEGKIFQAAKDAGISLLSITHRPSLWKYHTHLLEFDGEGGWQFRAL 692 (728)
T ss_pred hHHHHHHHHHhcCceEEEeecCccHHHHHHHHHhccCCCCeeeccC
Confidence 9999999999999999999999999999999999999999988643
No 13
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.8e-73 Score=668.71 Aligned_cols=538 Identities=21% Similarity=0.260 Sum_probs=427.8
Q ss_pred cccccccChHHHHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh-cCh-hHHHHHHHHHHHHH
Q 000711 77 KANQKKGGLKSLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFL-RRV-PLFFQLISENILLC 154 (1338)
Q Consensus 77 ~~~~~~~~~~~l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~-~~~-~~~~~~~~~~~~~~ 154 (1338)
+....|.....++||+.++.|.|+ + +.+.++++++.+..+..+|.+.|.++|.+.. .+. ..|.+......++.
T Consensus 124 ~~~~~~~~~~~~~rl~~l~~~~~~----~-l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~ 198 (716)
T KOG0058|consen 124 KAAGQKPNHTLLKRLLGLLKPEWK----W-LVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLF 198 (716)
T ss_pred CCCCcccchhHHHHHHHHhchhHH----H-HHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 333444444578899999999887 3 6777778888888899999999999999887 332 22333322233333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHH
Q 000711 155 FLLSTMHSTSKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVT 233 (1338)
Q Consensus 155 ~~~~~~~~~~~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~ 233 (1338)
++.++++.+..|+.+..+.+ +..++|...|+++.+++++|||.+ ++++.+|++.|...+.+.+...+...+.+.+
T Consensus 199 ~~~a~~~~~r~~~~~~a~~r----v~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~ 274 (716)
T KOG0058|consen 199 LIGALANAIRGGLLQYAGER----VVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLV 274 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 33344555555666666666 999999999999999999999965 8899999999999999999888888888777
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHH
Q 000711 234 DGLLYTWRLCSYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHI 313 (1338)
Q Consensus 234 ~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~ 313 (1338)
.++. ...+|++.+|.++++.++.+|+.+.+...+|+.++++..+.|+.-|+..+..++...++++|+.|++|+.|.+++
T Consensus 275 ~~~g-~~~~M~~~S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry 353 (716)
T KOG0058|consen 275 QGFG-GLGFMFSLSWRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRY 353 (716)
T ss_pred HHHH-hHHHHhhhhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHH
Confidence 6543 345677889999999999999888888999999999999999999999999899889999999999999999655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccccCC-cchhhHHHHHHHHHHHHHHHHHHHHH
Q 000711 314 QQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPD-TSTLGRAKMLSNLRYHTSVIISLFQS 392 (1338)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~ 392 (1338)
.++.++..+-.++. ....++++..........+. ...+++|.+..+ ..+.| .+.+++.| -..+-.+
T Consensus 354 ~~~l~~~~~i~~k~---a~a~~~f~~~~~~~~~~~~~----siL~~Gg~Lv~~g~mt~g--~L~sFllY----~~~~g~s 420 (716)
T KOG0058|consen 354 NKKLREVLKLSKKE---AVAYGIFFGSTNLLGNLAVL----SILFYGGHLVLTGSLTSG--ALSSFLLY----QVQLGSS 420 (716)
T ss_pred HHHHHHHHHHHHHH---HHHhhHhHhHHHHHHhHHHH----HHHHhccchhhcCccchh--HHHHHHHH----HHHHHHH
Confidence 55554444322221 11112221111111111111 122466666433 34554 34554444 3344567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCC--CeeeeeeeEEEeC
Q 000711 393 LGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG--NVLVENLTLKVEP 470 (1338)
Q Consensus 393 l~~l~~~~~~l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~--~~~l~~~sl~i~~ 470 (1338)
+..++..+..+.+..++.+|++|++|.+|.++..+...+ ..-.+.|+|+||+|.||.. .++|+|+||+|+|
T Consensus 421 l~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~G~~~p-------~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~p 493 (716)
T KOG0058|consen 421 LSGLSSFYSELMKGVGASERVFELMDRKPRIPLTGTLAP-------DHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRP 493 (716)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCCCcccc-------ccccceEEEEEeeeecCCCCCchhhcCceeeeCC
Confidence 888999999999999999999999998887653211110 0236789999999999974 5799999999999
Q ss_pred CCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccC
Q 000711 471 GSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVE 544 (1338)
Q Consensus 471 G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~ 544 (1338)
||.+|+|||||+||||+.++|.++|+|++|+|.+||++ ..+|++||+|.|+|.+|++||+|||.||.+
T Consensus 494 Ge~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~------ 567 (716)
T KOG0058|consen 494 GEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLD------ 567 (716)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCC------
Confidence 99999999999999999999999999999999999987 347899999999999999999999999975
Q ss_pred CCCHHHHHHHHHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHH
Q 000711 545 PLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKV 621 (1338)
Q Consensus 545 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l 621 (1338)
..+++++..+.+.++.++|+..+|+++++ +.|.+|||||||||||||||++||+||||||+|||||.++|..+.+.+
T Consensus 568 ~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL 647 (716)
T KOG0058|consen 568 NATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEAL 647 (716)
T ss_pred CCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHH
Confidence 36899999999999999999999998776 468899999999999999999999999999999999999999999999
Q ss_pred Hc--cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 622 RA--MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 622 ~~--~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
.+ .++|||+|+||+++++.||+|++++++
T Consensus 648 ~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G 678 (716)
T KOG0058|consen 648 DRLMQGRTVLVIAHRLSTVRHADQIVVIDKG 678 (716)
T ss_pred HHhhcCCeEEEEehhhhHhhhccEEEEEcCC
Confidence 75 489999999999999999999999874
No 14
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=6e-70 Score=687.94 Aligned_cols=562 Identities=34% Similarity=0.606 Sum_probs=466.0
Q ss_pred hHHHHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 85 LKSLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTS 164 (1338)
Q Consensus 85 ~~~l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (1338)
++++.+++++++|+++++++..+++.++++++++++++.+|.+.+.++|.+++++...|...++.+++++++.++++++.
T Consensus 76 ~~~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~ 155 (659)
T TIGR00954 76 LGKLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAI 155 (659)
T ss_pred HHHHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45688899999999999998888889999999999999999999999999998888778776666666666777888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCCCCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000711 165 KYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCS 244 (1338)
Q Consensus 165 ~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 244 (1338)
+|+.+++..+||++++++++++|+++..+|++.++|++.+|++||+++|++.+++.+...+..++.++++.+.+++.++.
T Consensus 156 ~~~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~ 235 (659)
T TIGR00954 156 KYLLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDSRIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLT 235 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988899999999999999999999999999999998888777776
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 000711 245 YASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHM 324 (1338)
Q Consensus 245 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~ 324 (1338)
..+|.+++++++++++..++..+++|++.+++.++++.+++++..+.+..+|+|+||+|++|+.|.+++++.++++.++.
T Consensus 236 ~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~ 315 (659)
T TIGR00954 236 ALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHL 315 (659)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 68899988888898888888899999999999999999999999999999999999999999999999999999998887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccc-ccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 325 RVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGN-LKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRL 403 (1338)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l 403 (1338)
.+..+....+..+..++..+....++++++..+++... ...+..+.|.. ++.+.....++..++.++..++..+..+
T Consensus 316 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~--~~~f~~~~~~~~~l~~~~~~l~~~~~~i 393 (659)
T TIGR00954 316 NLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEEL--MQEFYNNGRLLLKAADALGRLMLAGRDM 393 (659)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766666666666555444333333333333333211 11122345432 2212222344566778999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccccC--CC-CCC-CC-------------CCCCcCCCCcEEEEeEEEEcCCCCeeeeeeeE
Q 000711 404 NRLSGYADRIHELMVISRELSIED--KS-PQR-NG-------------SRNYFSEANYIEFSGVKVVTPTGNVLVENLTL 466 (1338)
Q Consensus 404 ~~~~~~~~ri~~~~~~~~~~~~~~--~~-~~~-~~-------------~~~~~~~~~~i~~~~v~~~~~~~~~~l~~~sl 466 (1338)
+++.++++|+.++++.+++.+... .. ... .. ........+.++++||++.||+++++++|+||
T Consensus 394 ~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~~~il~~isl 473 (659)
T TIGR00954 394 TRLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNGDVLIESLSF 473 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCCCeeeecceE
Confidence 999999999999998765532110 00 000 00 00011123579999999999877789999999
Q ss_pred EEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCccccccEEEEecCCCCCCCCHHHHhcCCCCCCcc-cCC
Q 000711 467 KVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEP 545 (1338)
Q Consensus 467 ~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~-~~~ 545 (1338)
++++||+++|+||||||||||+++|+|+|+|++|+|.+++ +++++||||+|+++++|++|||.++...... ...
T Consensus 474 ~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~ 548 (659)
T TIGR00954 474 EVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRG 548 (659)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccC
Confidence 9999999999999999999999999999999999999875 4579999999999999999999997532111 112
Q ss_pred CCHHHHHHHHHHcCCchHHhcCCC--CccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc
Q 000711 546 LTHGGMVELLKNVDLEYLLDRYPP--EKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA 623 (1338)
Q Consensus 546 ~~~~~~~~~l~~~~l~~~~~~~~~--~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~ 623 (1338)
.+++++.++++.+++++++++ |. ++..+|+.+||||||||++||||++++|+++|||||||+||+++++.+++.+++
T Consensus 549 ~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~ 627 (659)
T TIGR00954 549 LSDKDLEQILDNVQLTHILER-EGGWSAVQDWMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCRE 627 (659)
T ss_pred CCHHHHHHHHHHcCCHHHHhh-cCCcccccccccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHH
Confidence 457788999999999999887 44 344468889999999999999999999999999999999999999999999998
Q ss_pred cCCeEEEEecChhhHhhcceEEEccCCCceE
Q 000711 624 MGTSCITISHRPALVAFHDVVLSLDGEGEWR 654 (1338)
Q Consensus 624 ~~~t~i~itH~~~~~~~~d~i~~l~~~g~~~ 654 (1338)
.|+|+|+||||++++++||++++++++|+|.
T Consensus 628 ~~~tvI~isH~~~~~~~~d~il~l~~~g~~~ 658 (659)
T TIGR00954 628 FGITLFSVSHRKSLWKYHEYLLYMDGRGGYQ 658 (659)
T ss_pred cCCEEEEEeCchHHHHhCCEEEEEeCCCCcc
Confidence 8999999999999999999999999988885
No 15
>KOG0060 consensus Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis) [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=3.2e-69 Score=616.08 Aligned_cols=569 Identities=36% Similarity=0.611 Sum_probs=465.1
Q ss_pred hhhHHhHHHHhhccccchhhHHHHHHHHH-HHHHHHHHHHHHhhcchHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 739 PLRVADMFKVLVPTVFDKQGAQLLAVAFL-VVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAASSFIAPS 817 (1338)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 817 (1338)
..++..++++++|..+.++.++++.+.+. ....+...+.+....+....+...++...|..++..++++..+.......
T Consensus 62 ~~k~~~ilkil~p~~~~~~~~~l~l~~~~l~~~~~~~~y~~~~~~~~~y~al~~kd~~~F~~~~~~~~~~~~~~s~~~a~ 141 (659)
T KOG0060|consen 62 FQKFLQILKILFPSTFSSQTALLLLALVALTLLTTADVYMIGNIPTKFYVALINKDAELFKRLLFKYVLLIPGISLLNAL 141 (659)
T ss_pred HHHHHHHHHHhccCccccHHHHHHHHHHHHHHHHHhHhheecccchhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566778888998887777766554333 33333334444444455555666778888887777777666666666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHH
Q 000711 818 IRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMK 897 (1338)
Q Consensus 818 ~~~~~~~~~~~~r~~l~~~l~~~~l~~~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~~~~i~~~~~~l~ 897 (1338)
..+....+.++||.++++++++.|++...||++.+.+...+|||||+++|++.++..+..+...++.+.++++++.|+++
T Consensus 142 ~ky~~~~L~Lr~R~~ltk~lh~~Y~k~~~yYkis~~d~ridNPDQrltqDv~kf~~~l~sl~s~l~~a~~di~~Y~~~l~ 221 (659)
T KOG0060|consen 142 LKFTTNELYLRFRKNLTKYLHRLYFKGFTYYKLSNLDDRIDNPDQRLTQDVEKFCRQLSSLYSNLLKAPFDLVYYTFRLF 221 (659)
T ss_pred HHHHHhhhHhHHHHHHHHHHHHHHhccceEEEecccccccCChHHHHhHHHHHHHHHHHHHHHhhhccceeeehhhhHHh
Confidence 77888889999999999999999999999999999988899999999999999999999999999999999999999999
Q ss_pred HhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHHHHHHHHHHHHHHHH
Q 000711 898 ALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEH 977 (1338)
Q Consensus 898 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e~~~~~~~~~~~~~~ 977 (1338)
...++.+++.++.|++++..+.+...+++..++.+++++|+.||..|.+++.|+|.||+|+++..|.....++|++++++
T Consensus 222 ~s~g~~gp~~i~~Yf~~~~vi~~~L~~pI~~l~~~qeklEGdfRy~h~rlr~NaE~iAFY~g~~~E~~~~~~~f~~Lv~~ 301 (659)
T KOG0060|consen 222 ESAGWLGPVSIFAYFLIGTVINKTLRGPIVKLTVEQEKLEGDFRYKHSRLRVNAEEIAFYRGGQVEHQRTDQRFRNLVQH 301 (659)
T ss_pred hhcCcccHHHHHHHHHHHHHHHhhhccchhHHHHHHHHhhcchhhheeeeeecchhhhhhccCchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHhhhhhHHHHHHH-HHHHHhhcccchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 978 SLLLLKKKWLFGILDDFVTKQLPHNVTWGLS-LLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKF 1056 (1338)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1338)
....+..+|+.++.++++. .+...+.|.+. ..+ ..+....-.++.++...+..-+.++..++.+|+.+..+.+.+
T Consensus 302 l~~l~~~r~~l~f~~n~~~-Ylg~ilsy~vi~~p~---Fs~h~y~~~s~aEL~~~i~~na~~~i~Li~~f~~l~~~~~~l 377 (659)
T KOG0060|consen 302 LRELMSFRFWLGFIDNIFD-YLGGILSYVVIAIPF---FSGHVYDDLSPAELSGLISNNAFVFIYLISAFGRLVDLSRDL 377 (659)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHhhheeeEEeeee---ecccccCCcCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhH
Confidence 9999888888887766554 22222222111 001 111011112356666666666666777888999999999999
Q ss_pred HHHHhHHhHHHHHHHHHhhcCCCC--------------CCccCC--ccCCCCCCCCCCceEEeeeEEeCCC-cccccccc
Q 000711 1057 VELSGGINRIFELEELLDAAQPGD--------------DEISGS--SQHKWNSTDYQDSISFSKLDIITPS-QKLLARQL 1119 (1338)
Q Consensus 1057 ~~~~~a~~Ri~~~~~~~~~~~~~~--------------~~~~~~--~~~~wp~~~~~g~I~f~nV~f~yp~-~~~vL~~l 1119 (1338)
.++++.+.||.|+.+..+....+. ...... .+..||. ...|+|++|++..|+ ++.+.+|+
T Consensus 378 s~lsGyt~Ri~el~~~l~d~~~~~~~~~~~~~~~~E~~~~l~~~~G~~~~~~~---Dn~i~~e~v~l~tPt~g~~lie~L 454 (659)
T KOG0060|consen 378 SRLSGYTHRIGELMEVLDDLSSGSQECTMEEEELGEAEWGLSLPPGSGKAEPA---DNAIEFEEVSLSTPTNGDLLIENL 454 (659)
T ss_pred HHhhhHHHHHHHHHHHHHHhccCCcchhhhhhhhhhhhhccCCCCCCcccccc---cceEEeeeeeecCCCCCceeeeee
Confidence 999999999999988765432111 000011 1233444 357999999999998 56667889
Q ss_pred ceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcCCCCCCCCCHHHHhcCCCchH
Q 000711 1120 TFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQRPYTCLGTLRDQIIYPLSRE 1199 (1338)
Q Consensus 1120 sf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~ 1199 (1338)
||+|+.|+.+.|+||||||||||++.|.++|+..+|++..+...- -..+.||||.||+-.||+||++.||....
T Consensus 455 s~~V~~g~~LLItG~sG~GKtSLlRvlggLWp~~~G~l~k~~~~~------~~~lfflPQrPYmt~GTLRdQvIYP~~~~ 528 (659)
T KOG0060|consen 455 SLEVPSGQNLLITGPSGCGKTSLLRVLGGLWPSTGGKLTKPTDGG------PKDLFFLPQRPYMTLGTLRDQVIYPLKAE 528 (659)
T ss_pred eeEecCCCeEEEECCCCCchhHHHHHHhcccccCCCeEEecccCC------CCceEEecCCCCccccchhheeeccCccc
Confidence 999999999999999999999999999999999999998654311 13599999999999999999999997543
Q ss_pred HHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC--cccCCCChhHHHHHHHHHHhhcCCCEE
Q 000711 1200 EAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL--NWEDILSLGEQQRLGMARLFFHKPKFG 1277 (1338)
Q Consensus 1200 ~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~--~~g~~LSgGQrQrlaiARAlLr~p~IL 1277 (1338)
+. +.....|+.|...|+.++|.+++++. +|||.++ +|.+.||+||+||||+||.++++|++.
T Consensus 529 ~~---------------~~~~~~d~~i~r~Le~v~L~hl~~r~-ggld~~~~~dW~dvLS~GEqQRLa~ARLfy~kPk~A 592 (659)
T KOG0060|consen 529 DM---------------DSKSASDEDILRILENVQLGHLLERE-GGLDQQVDWDWMDVLSPGEQQRLAFARLFYHKPKFA 592 (659)
T ss_pred cc---------------cccCCCHHHHHHHHHHhhhhhHHHHh-CCCCchhhccHHhhcCHHHHHHHHHHHHHhcCCceE
Confidence 21 12234688999999999999999996 8999664 799999999999999999999999999
Q ss_pred EeecCCCCCCHHHHHHHHHHHHhcCCeEEEeccCCCCcccccceEEEecCCCCeEEecCC
Q 000711 1278 ILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNWELRTIS 1337 (1338)
Q Consensus 1278 iLDEATSaLD~~te~~i~~~~~~~~~TvI~IAHRl~~i~~~d~~l~l~~g~g~~~~~~~~ 1337 (1338)
||||||||+|.|.|.++++.+++.|+|.|+|.||.++.+|||.+|.+ ||+|+|++..|.
T Consensus 593 iLDE~TSAv~~dvE~~~Yr~~r~~giT~iSVgHRkSL~kfHd~~L~~-~g~g~w~~~~I~ 651 (659)
T KOG0060|consen 593 ILDECTSAVTEDVEGALYRKCREMGITFISVGHRKSLWKFHDYVLRM-DGRGSWRFHQID 651 (659)
T ss_pred EeechhhhccHHHHHHHHHHHHHcCCeEEEeccHHHHHhhhhEEEEe-cCCCceEEEEec
Confidence 99999999999999999999999999999999999999999999999 899999998874
No 16
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=6e-63 Score=612.58 Aligned_cols=528 Identities=19% Similarity=0.243 Sum_probs=409.4
Q ss_pred HHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 88 LQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYI 167 (1338)
Q Consensus 88 l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 167 (1338)
+.+++..++++++. +.-+++.+++...+++..|.....++|...-.... ..+....+..++..++..+.+++
T Consensus 142 ~~~f~~~~~~~~~~-----l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~---~tL~vl~ig~~~~~l~~~~l~~l 213 (709)
T COG2274 142 LSWFIPLLFKYRRL-----LFEVLLASLLLQLLALATPLFSQIVIDKVLPDASR---STLTVLAIGLLLAALFEALLRLL 213 (709)
T ss_pred hHhHHHHHHhhHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCch---hHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666777777662 55566677777777777777777777765432221 22222222233334456778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Q 000711 168 TGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYA 246 (1338)
Q Consensus 168 ~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~ 246 (1338)
+.++..++.+++...+..++++|++++|++||.++ .++..+|+ +|++.+.+.+..-+...+..++.+++|. .+|+++
T Consensus 214 r~~~~~~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l-~vm~~y 291 (709)
T COG2274 214 RTYLIAHLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFL-AVMFLY 291 (709)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 88888888888999999999999999999999865 66777776 5677655554444333333333333333 345677
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Q 000711 247 SPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRV 326 (1338)
Q Consensus 247 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~ 326 (1338)
+|.+++++++.+++.+++..++.|++++.+.++.+..++....+.+...++|+||..+.|.+...+|+++|.+..+...+
T Consensus 292 s~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~ 371 (709)
T COG2274 292 SWKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFK 371 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 99999999888888888888899999999988888888888888888899999999999999999999999988775544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccc-CCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 327 VLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNR 405 (1338)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~ 405 (1338)
..+...+.+.+..++...... .+++ ++..+. .+..|+|.. ++ +..+...+.+++.+++..+.++++
T Consensus 372 ~~~~~~~~~~~~~~l~~l~~v---~iL~----~G~~lVl~~~lTlG~L--iA----f~~l~~~f~~pi~~L~~~~~~~q~ 438 (709)
T COG2274 372 TEKLALILNTIKSLLQQLSSV---LILW----FGAILVLEGELTLGQL--VA----FNMLAGYFISPITRLSQLWTDFQQ 438 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHH----HHHHHHhcCCcchHHH--HH----HHHHHHHHHhHHHHHHHHHHHHHH
Confidence 444343444433333322221 1222 322222 233466654 32 223344566788899999999999
Q ss_pred HHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcH
Q 000711 406 LSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGK 484 (1338)
Q Consensus 406 ~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGK 484 (1338)
...+.+|+.++++.++|.+.+... ...+...+.|+|+||+|.|+.+ .++|+|+||+|++||+++|+|+|||||
T Consensus 439 ~~~~~~rL~dil~~~~E~~~~~~~------~~~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGK 512 (709)
T COG2274 439 AKVALERLGDILDTPPEQEGDKTL------IHLPKLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGK 512 (709)
T ss_pred HHHHHHHHHHHhcCCccccccccc------ccccccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCH
Confidence 999999999999988775422110 0112236889999999999765 569999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHc
Q 000711 485 SSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNV 558 (1338)
Q Consensus 485 STLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~ 558 (1338)
|||+|+|+|+|+|++|+|.+||.| ..+|++|+||+|++.+|+||++|||.++.+. .+++++.++++.+
T Consensus 513 STL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~------~~~e~i~~A~~~a 586 (709)
T COG2274 513 STLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPE------ATDEEIIEAAQLA 586 (709)
T ss_pred HHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCC------CCHHHHHHHHHHh
Confidence 999999999999999999999987 4578999999999999999999999998754 5789999999999
Q ss_pred CCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHcc--CCeEEEEec
Q 000711 559 DLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISH 633 (1338)
Q Consensus 559 ~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~itH 633 (1338)
|+++++.++|.++++ +.|.+||||||||++|||||+++|+||||||||||||+++|+.+++.+.+. |+|+|+|||
T Consensus 587 g~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaH 666 (709)
T COG2274 587 GAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAH 666 (709)
T ss_pred CcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEc
Confidence 999999999998776 578999999999999999999999999999999999999999999999874 799999999
Q ss_pred ChhhHhhcceEEEccCC
Q 000711 634 RPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 634 ~~~~~~~~d~i~~l~~~ 650 (1338)
|++++++||+|++|+++
T Consensus 667 Rl~ti~~adrIiVl~~G 683 (709)
T COG2274 667 RLSTIRSADRIIVLDQG 683 (709)
T ss_pred cchHhhhccEEEEccCC
Confidence 99999999999999973
No 17
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.2e-63 Score=616.55 Aligned_cols=529 Identities=19% Similarity=0.211 Sum_probs=395.6
Q ss_pred HHHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHH----HH
Q 000711 87 SLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTM----HS 162 (1338)
Q Consensus 87 ~l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 162 (1338)
++++++++.+|.|. ++++.++.++++-...-..+.+.+.++......+.+...+....|.++++++.++ +.
T Consensus 651 s~~~i~k~~~pe~~-----~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~ 725 (1228)
T KOG0055|consen 651 SFWRIFKLNKPEWP-----YLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNF 725 (1228)
T ss_pred cHHHHHHhccchhH-----HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999655 3666777778888888888899999999988666554432222243333333333 44
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC--CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000711 163 TSKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR--ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTW 240 (1338)
Q Consensus 163 ~~~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~--~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~ 240 (1338)
++.|+-...+.+ |+.|+|.+.|++++++++.|||.. .+.+..|+++|...+...+.+-+..++..+... +...
T Consensus 726 ~q~~~f~~~ge~----Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~-~~~i 800 (1228)
T KOG0055|consen 726 LQHYFFGIAGEK----LTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAV-IIGI 800 (1228)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 455555555555 999999999999999999999852 366778999999988777777666665554432 2333
Q ss_pred HHHHhchhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHH
Q 000711 241 RLCSYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKAL 320 (1338)
Q Consensus 241 ~l~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~ 320 (1338)
.+.++++|.+++++++.+|+..+......+.+.+...+..+...+......+..+|+++|+.|+.|++..+ .|.+.
T Consensus 801 iiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~----~y~~~ 876 (1228)
T KOG0055|consen 801 IIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFME----LYKEE 876 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHH----HHHHH
Confidence 44556788888888888887766555555555555555555555666677777789999999999998874 44443
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccccCC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 321 TRH-MRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPD-TSTLGRAKMLSNLRYHTSVIISLFQSLGTLSI 398 (1338)
Q Consensus 321 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~ 398 (1338)
.+. .+...++.++.++...+...++....++.+ |+++.+... ..++... + .. +..+......+++...
T Consensus 877 l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f----~~G~~Li~~g~~~~~~~--~---~v-f~~l~~ta~~~~~~~s 946 (1228)
T KOG0055|consen 877 LEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSF----WYGARLISNGEMTFEDV--F---RV-FMALSFTAMALGQASS 946 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHhHHHHhcCCcCHHHH--H---HH-HHHHHHHHHHHHHHHh
Confidence 332 233344555555544333222222222222 344443322 2233321 1 11 1122222345667777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCC--CCeeeeeeeEEEeCCCEEEE
Q 000711 399 SSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLI 476 (1338)
Q Consensus 399 ~~~~l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~--~~~~l~~~sl~i~~G~~~~i 476 (1338)
....+.++..++.+++++++.++.++.++. .......-.|.|+|+||+|.||. +.++|+|+||++++|+.+||
T Consensus 947 ~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~-----~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvAL 1021 (1228)
T KOG0055|consen 947 YAPDISKAKIAAGSIFEILDRKPTIDPDST-----SGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVAL 1021 (1228)
T ss_pred hCcHHHHHHHHHHHHHHHhcCCCCCCCCCC-----CCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEE
Confidence 788899999999999999998876553210 11111123578999999999996 35899999999999999999
Q ss_pred EcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHH
Q 000711 477 TGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGG 550 (1338)
Q Consensus 477 ~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~ 550 (1338)
||||||||||++.+|.++|+|++|.|.+||.| ..+|++|+.|.|+|.||++||||||+||.. ..+.++
T Consensus 1022 VG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~------~vs~~e 1095 (1228)
T KOG0055|consen 1022 VGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSE------EVSEEE 1095 (1228)
T ss_pred ECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCC------CCCHHH
Confidence 99999999999999999999999999999987 357899999999999999999999999932 268899
Q ss_pred HHHHHHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cC
Q 000711 551 MVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MG 625 (1338)
Q Consensus 551 ~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~ 625 (1338)
+.++++.++.++|+..+|.++++ +.|.+||||||||||||||+++||+||||||+|||||.++|+.++++|.+ .|
T Consensus 1096 Ii~Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~g 1175 (1228)
T KOG0055|consen 1096 IIEAAKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEG 1175 (1228)
T ss_pred HHHHHHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcC
Confidence 99999999999999999998777 46899999999999999999999999999999999999999999999986 59
Q ss_pred CeEEEEecChhhHhhcceEEEccCC
Q 000711 626 TSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 626 ~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
+|+|+|+||++++++||.|.|++++
T Consensus 1176 RT~IvIAHRLSTIqnaD~I~Vi~~G 1200 (1228)
T KOG0055|consen 1176 RTTIVIAHRLSTIQNADVIAVLKNG 1200 (1228)
T ss_pred CcEEEEecchhhhhcCCEEEEEECC
Confidence 9999999999999999999999973
No 18
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=7.3e-62 Score=622.75 Aligned_cols=528 Identities=20% Similarity=0.222 Sum_probs=398.3
Q ss_pred HHHHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhc-ChhHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 86 KSLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLR-RVPLFFQLISENILLCFLLSTMHSTS 164 (1338)
Q Consensus 86 ~~l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (1338)
..+++++++++|.++ . ++..+++.++.+.+.+.+|.+.+.++|.+..+ +...|...++..++ +.++..+.
T Consensus 147 ~~~~~l~~~~~~~~~----~-l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 217 (711)
T TIGR00958 147 DLLFRLLGLSGRDWP----W-LISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCL----LSIASSVS 217 (711)
T ss_pred hHHHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH----HHHHHHHH
Confidence 346788888887655 2 66677778888899999999999999998744 44444433322222 22223334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000711 165 KYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLC 243 (1338)
Q Consensus 165 ~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 243 (1338)
.+++..+.......+..+++.+.|+++.+.+++++++. .++..+|+++|++.+.+.+...+..++..++..+...+ ++
T Consensus 218 ~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~-~l 296 (711)
T TIGR00958 218 AGLRGGSFNYTMARINLRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLG-FM 296 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 44555555555555888899999999999999998764 67999999999999888777766666655554443333 34
Q ss_pred HhchhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 000711 244 SYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRH 323 (1338)
Q Consensus 244 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~ 323 (1338)
++++|.+++++++..++..++..+++++..+...+.++.++++.....+..+++++||.|++|+.+.+++.+..++..+.
T Consensus 297 ~~~s~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~ 376 (711)
T TIGR00958 297 LWLSPRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQL 376 (711)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 45788888887777777777777788888888888888888888888888899999999999999998887777766654
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccc-CCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 324 MRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRR 402 (1338)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 402 (1338)
..+..............+.. + ....+++ +++.+. .+..+.|.. ++. ..+...+..++..+...+..
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~-~--~~~~il~----~g~~lv~~g~it~G~l--va~----~~~~~~l~~~l~~l~~~~~~ 443 (711)
T TIGR00958 377 NKRKALAYAGYLWTTSVLGM-L--IQVLVLY----YGGQLVLTGKVSSGNL--VSF----LLYQEQLGEAVRVLSYVYSG 443 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHH-H--HHHHHHH----HHHHHHHcCCCCHHHH--HHH----HHHHHHHHHHHHHHHHHHHH
Confidence 43322222111111111110 1 1111111 111111 122355533 222 23445566788888899999
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCC--CCeeeeeeeEEEeCCCEEEEEcCC
Q 000711 403 LNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLITGPN 480 (1338)
Q Consensus 403 l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~--~~~~l~~~sl~i~~G~~~~i~G~s 480 (1338)
+++..++.+|+.++++.+++.+..... ......+.|+|+||+|.||+ ++++|+|+||+|++||+++|+|||
T Consensus 444 ~~~~~~a~~ri~~~l~~~~~~~~~~~~-------~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~S 516 (711)
T TIGR00958 444 MMQAVGASEKVFEYLDRKPNIPLTGTL-------APLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPS 516 (711)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCC-------CCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCC
Confidence 999999999999999765443211100 00112457999999999986 368999999999999999999999
Q ss_pred CCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHH
Q 000711 481 GSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVEL 554 (1338)
Q Consensus 481 GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~ 554 (1338)
|||||||+++|+|+|+|++|+|.+||.+ .+++++|+||||+|++|++|+||||.|+.+. .+++++.++
T Consensus 517 GsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~------~~~e~i~~a 590 (711)
T TIGR00958 517 GSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTD------TPDEEIMAA 590 (711)
T ss_pred CCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCC------CCHHHHHHH
Confidence 9999999999999999999999999976 3467889999999999999999999998642 468899999
Q ss_pred HHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHccCCeEEEE
Q 000711 555 LKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITI 631 (1338)
Q Consensus 555 l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~i 631 (1338)
++.++++++++++|.+.++ ++|.+||||||||++||||++++|+++|||||||+||+++|+.+++.....++|+|+|
T Consensus 591 l~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~~~~~~~~TvIiI 670 (711)
T TIGR00958 591 AKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQESRSRASRTVLLI 670 (711)
T ss_pred HHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHHhhccCCCeEEEE
Confidence 9999999999999876554 4688999999999999999999999999999999999999999999444468999999
Q ss_pred ecChhhHhhcceEEEccC
Q 000711 632 SHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 632 tH~~~~~~~~d~i~~l~~ 649 (1338)
|||+++++.+|+|++|++
T Consensus 671 tHrl~~i~~aD~IivL~~ 688 (711)
T TIGR00958 671 AHRLSTVERADQILVLKK 688 (711)
T ss_pred eccHHHHHhCCEEEEEEC
Confidence 999999999999999986
No 19
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2e-61 Score=610.71 Aligned_cols=533 Identities=15% Similarity=0.174 Sum_probs=392.4
Q ss_pred HHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh--cChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 88 LQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFL--RRVPLFFQLISENILLCFLLSTMHSTSK 165 (1338)
Q Consensus 88 l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1338)
+++++++++|+++. +++.+++.++...+.+..|.+.+.++|.+.. .+...++. +++++++..++..+..
T Consensus 10 ~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 80 (588)
T PRK11174 10 TRWLKQQSKPAKRW-----LNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLP----PFILLILLFVLRALLA 80 (588)
T ss_pred hHHHHHHhHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHH----HHHHHHHHHHHHHHHH
Confidence 46788899888762 5566677778888888899999999998753 22222221 2222223334455566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000711 166 YITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCS 244 (1338)
Q Consensus 166 ~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 244 (1338)
|+..++..+....+..+++.+.++++...+.+++++. .++..+|+++|++.+.+.+...+..++..++..+... .+++
T Consensus 81 ~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~-~~l~ 159 (588)
T PRK11174 81 WLRERVGFKAGQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLIL-IAVF 159 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 6666666666667889999999999999999998765 6799999999999988877766666555554433332 3445
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 000711 245 YASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHM 324 (1338)
Q Consensus 245 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~ 324 (1338)
+++|.+++++++.+++..++..+++++..+...+.++..+++.....+..+++++||.|++|+.+.+++.+..++..+..
T Consensus 160 ~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~ 239 (588)
T PRK11174 160 PINWAAGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRT 239 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 67888888777776666666666777777777777777777877778888899999999999999987776666655543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhHhcccccCCcc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 325 RVVLHDHWWFGMIQDFLLKYLGATVAVIL-IIEPFFAGNLKPDTS--TLGRAKMLSNLRYHTSVIISLFQSLGTLSISSR 401 (1338)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 401 (1338)
.+..+.......+..+. ....+..++ +...++.|.+..+.. +++....+ ....+...++.++..+...+.
T Consensus 240 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~t~G~l~~~~~~~~~~----~~~~l~~~~~~pl~~l~~~~~ 312 (588)
T PRK11174 240 MEVLRMAFLSSAVLEFF---ASISIALVAVYFGFSYLGELNFGHYGTGVTLFAGF----FVLILAPEFYQPLRDLGTFYH 312 (588)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcccccccccccchHHHHH----HHHHHhHHHHHHHHHHHHHHH
Confidence 33322222122211111 111111111 111112233322211 11101101 111233456678888888899
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCC
Q 000711 402 RLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNG 481 (1338)
Q Consensus 402 ~l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sG 481 (1338)
.+++...+.+|+.++++.+++... +... . ......+.|+|+||+|.|++++++|+|+||+|++||+++|+||||
T Consensus 313 ~~~~~~~~~~ri~~~l~~~~~~~~-~~~~----~-~~~~~~~~i~~~~vsf~~~~~~~vL~~i~l~i~~G~~vaIvG~SG 386 (588)
T PRK11174 313 AKAQAVGAAESLVTFLETPLAHPQ-QGEK----E-LASNDPVTIEAEDLEILSPDGKTLAGPLNFTLPAGQRIALVGPSG 386 (588)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccC-CCcc----c-cCCCCCceEEEEeeEEeccCCCeeeeeeEEEEcCCCEEEEECCCC
Confidence 999999999999999876543211 0000 0 000113469999999877667889999999999999999999999
Q ss_pred CcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHH
Q 000711 482 SGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELL 555 (1338)
Q Consensus 482 sGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l 555 (1338)
||||||+++|+|+| |++|+|.+||.+ .+++++|+||||+|++|++||+|||.++.+ +.+++++++++
T Consensus 387 sGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~------~~~~eei~~al 459 (588)
T PRK11174 387 AGKTSLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNP------DASDEQLQQAL 459 (588)
T ss_pred CCHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCC------CCCHHHHHHHH
Confidence 99999999999999 899999999975 346789999999999999999999999853 26789999999
Q ss_pred HHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEE
Q 000711 556 KNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCIT 630 (1338)
Q Consensus 556 ~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~ 630 (1338)
+.++++++++++|.+.++ +.|.+|||||||||+||||++++|+++|||||||+||+++++.+++.+++ .++|+|+
T Consensus 460 ~~a~l~~~i~~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIi 539 (588)
T PRK11174 460 ENAWVSEFLPLLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLM 539 (588)
T ss_pred HHhCHHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 999999999999987665 46889999999999999999999999999999999999999999998876 4899999
Q ss_pred EecChhhHhhcceEEEccCC
Q 000711 631 ISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 631 itH~~~~~~~~d~i~~l~~~ 650 (1338)
||||+++++.+|+|++++++
T Consensus 540 ItHrl~~i~~aD~Iivl~~G 559 (588)
T PRK11174 540 VTHQLEDLAQWDQIWVMQDG 559 (588)
T ss_pred EecChHHHHhCCEEEEEeCC
Confidence 99999999999999999863
No 20
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=4.1e-60 Score=610.62 Aligned_cols=534 Identities=19% Similarity=0.230 Sum_probs=400.5
Q ss_pred HHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 88 LQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYI 167 (1338)
Q Consensus 88 l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 167 (1338)
++.+++.++++++. ++..++++++...+++..|.+.+.++|.+........ +...++.++++.++..+..|+
T Consensus 142 ~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~ 213 (710)
T TIGR03796 142 LRALWRRLRGSRGA-----LLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDW---LRPLLLGMGLTALLQGVLTWL 213 (710)
T ss_pred HHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhH---HHHHHHHHHHHHHHHHHHHHH
Confidence 45666777776552 4556666777778888899999999998774432221 111222222333445667778
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Q 000711 168 TGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYA 246 (1338)
Q Consensus 168 ~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~ 246 (1338)
+.++..++...+..+++.++|+++.+.|+++++++ .++..+|+++| +.+.+.+...+...+..++..+.+.+. ++++
T Consensus 214 ~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~-l~~~ 291 (710)
T TIGR03796 214 QLYYLRRLQIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALL-MLLY 291 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 88888888888999999999999999999998765 67999999988 566666655555555444444444333 4467
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Q 000711 247 SPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRV 326 (1338)
Q Consensus 247 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~ 326 (1338)
+|.+++++++..++..++..++.++..+...+.++..+++.....+...++++||.+++|+.+.+++.+.+.+..+...+
T Consensus 292 ~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 371 (710)
T TIGR03796 292 DPVLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQE 371 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 88888887777776666677788888888878888888888888888889999999999999999998888777765544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccc-CCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 327 VLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNR 405 (1338)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~ 405 (1338)
..+...+...+..++... ....+++ +++.+. .+..+.|.. ++ +..++..++.++..+...+.+++.
T Consensus 372 ~~~~~~~~~~~~~~i~~~---~~~~il~----~g~~~v~~g~lt~G~l--va----~~~l~~~~~~p~~~l~~~~~~~~~ 438 (710)
T TIGR03796 372 LGVLTQILGVLPTLLTSL---NSALILV----VGGLRVMEGQLTIGML--VA----FQSLMSSFLEPVNNLVGFGGTLQE 438 (710)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHH----HHHHHHHcCCCCHHHH--HH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 433333333322222111 1111111 111111 122355543 22 223445566788888889999999
Q ss_pred HHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCcH
Q 000711 406 LSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGK 484 (1338)
Q Consensus 406 ~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~~sl~i~~G~~~~i~G~sGsGK 484 (1338)
...+.+|+.++++.+++.+..................+.|+++||+|.|++ ++++|+|+||+|++||+++|+|||||||
T Consensus 439 ~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGK 518 (710)
T TIGR03796 439 LEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGK 518 (710)
T ss_pred HHHHHHHHHHHHcCCCccccccccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCH
Confidence 999999999999765543211000000000000112457999999999986 4689999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHc
Q 000711 485 SSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNV 558 (1338)
Q Consensus 485 STLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~ 558 (1338)
|||+++|+|+|+|++|+|.+||.+ .+++++|+||||+|++|+||++|||.++.+ ..+++++.++++.+
T Consensus 519 STLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~------~~~~~~i~~al~~~ 592 (710)
T TIGR03796 519 STIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDP------TIPDADLVRACKDA 592 (710)
T ss_pred HHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCC------CCCHHHHHHHHHHh
Confidence 999999999999999999999976 346889999999999999999999998743 25788999999999
Q ss_pred CCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHccCCeEEEEecCh
Q 000711 559 DLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRP 635 (1338)
Q Consensus 559 ~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~itH~~ 635 (1338)
+++++++++|.+.++ +.|.+|||||||||+||||++++|+++|||||||+||+++|+.+++.+++.++|+|+||||+
T Consensus 593 ~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~~~~T~IiitHrl 672 (710)
T TIGR03796 593 AIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRRRGCTCIIVAHRL 672 (710)
T ss_pred CCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHhcCCEEEEEecCH
Confidence 999999999976554 57899999999999999999999999999999999999999999999998899999999999
Q ss_pred hhHhhcceEEEccCC
Q 000711 636 ALVAFHDVVLSLDGE 650 (1338)
Q Consensus 636 ~~~~~~d~i~~l~~~ 650 (1338)
++++.+|+|++|+++
T Consensus 673 ~~i~~~D~Iivl~~G 687 (710)
T TIGR03796 673 STIRDCDEIIVLERG 687 (710)
T ss_pred HHHHhCCEEEEEeCC
Confidence 999999999999863
No 21
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.9e-61 Score=597.53 Aligned_cols=459 Identities=21% Similarity=0.299 Sum_probs=323.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHh-----
Q 000711 811 SSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKP----- 885 (1338)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~----- 885 (1338)
..+..+...++..++...+..++++|+++.. ..||.. +..++..+|+ +|++.+.+.+.+.+...+..
T Consensus 211 ~~lr~~~~~~~~~rld~~l~~~~~~hll~Lp---l~~f~~----r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~ 282 (709)
T COG2274 211 RLLRTYLIAHLGKRLDLELSGRFFRHLLRLP---LSYFEK----RSVGEIISRV-RELEQIREFLTGSILTLIIDLLFAL 282 (709)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHcCc---HHHccC----CChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445555555555555555555532 356652 3446667776 56777776666544433322
Q ss_pred --HHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHH
Q 000711 886 --SVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGARE 963 (1338)
Q Consensus 886 --~~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e 963 (1338)
+..+++++|.|+++. ++.+.+++++...+. |.+.+.+++..+..+.-.....+...++++++..+.|.+.
T Consensus 283 i~l~vm~~ys~~L~li~----l~~~~l~~l~~~~~~----~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~ 354 (709)
T COG2274 283 IFLAVMFLYSWKLTLIV----LAAIPLNVLITLIFQ----PLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRF 354 (709)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHH
Confidence 223356788887664 222223332222222 2233334444333333344445556688999999888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHHHHHHHHHHH
Q 000711 964 KAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSF 1043 (1338)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~~~ 1043 (1338)
....++++.+..+...+..+..-..+....++. .+...+.+|++........ .+.|.+.++ .+..++..
T Consensus 355 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~l~~v~iL~~G~~lVl~~~--lTlG~LiAf----~~l~~~f~ 423 (709)
T COG2274 355 RSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQ-----QLSSVLILWFGAILVLEGE--LTLGQLVAF----NMLAGYFI 423 (709)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcCC--cchHHHHHH----HHHHHHHH
Confidence 777777777776655444333333333222222 2223344455443322211 133333322 23455667
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCCc-cccccccceE
Q 000711 1044 LAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQ-KLLARQLTFE 1122 (1338)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~~-~~vL~~lsf~ 1122 (1338)
.++..+.+...+++++..+.+|+.++.+.+++.+.+.. +.. .+...|+|+|+||+|+|+.+ +++|+|+||+
T Consensus 424 ~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~~-----~~~---~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~ 495 (709)
T COG2274 424 SPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDKT-----LIH---LPKLQGEIEFENVSFRYGPDDPPVLEDLSLE 495 (709)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc-----ccc---ccccCceEEEEEEEEEeCCCCcchhhceeEE
Confidence 78899999999999999999999999887655332110 111 12247999999999988664 7799999999
Q ss_pred EeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcC--CCch
Q 000711 1123 IVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIY--PLSR 1198 (1338)
Q Consensus 1123 I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~--p~~~ 1198 (1338)
|+|||+|||||+||||||||+++|.|+|+|++|+|.+||.|++++ ..+|++|+||||||+||+|||||||+. |...
T Consensus 496 I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~ 575 (709)
T COG2274 496 IPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEAT 575 (709)
T ss_pred eCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCC
Confidence 999999999999999999999999999999999999999999998 567889999999999999999999987 5556
Q ss_pred HHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEE
Q 000711 1199 EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFG 1277 (1338)
Q Consensus 1199 ~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~IL 1277 (1338)
+|++++||+.+++++ ++.++|.||||.+ +.|.+|||||||||+||||+++||+||
T Consensus 576 ~e~i~~A~~~ag~~~------------------------fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~IL 631 (709)
T COG2274 576 DEEIIEAAQLAGAHE------------------------FIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPKIL 631 (709)
T ss_pred HHHHHHHHHHhCcHH------------------------HHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCCEE
Confidence 677788888877644 3445588999998 678999999999999999999999999
Q ss_pred EeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1278 ILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1278 iLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
||||||||||.++|+.+++.+.+ .|+|+|+||||+++++.+|+++++++|+
T Consensus 632 lLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gk 684 (709)
T COG2274 632 LLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGK 684 (709)
T ss_pred EEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCc
Confidence 99999999999999999887655 4799999999999999999999997663
No 22
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.5e-62 Score=575.88 Aligned_cols=199 Identities=32% Similarity=0.396 Sum_probs=165.5
Q ss_pred cEEEEeEEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCC----ccEEEeCCCC------c-
Q 000711 444 YIEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV----SGHIAKPGVG------S- 509 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~---~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~----~G~i~~~~~~------~- 509 (1338)
.++++|+++.|... .++++|+||++.+||+++|+|+|||||||+.++|+|+.++. +|+|.++|.+ .
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 68999999877542 36999999999999999999999999999999999999988 8999999975 1
Q ss_pred --c-ccccEEEEecCCCC---CCCCHHHHhcCCCCCCc-ccCCCCHHHHHHHHHHcCCchHHhc--CCCCccccCCCCCC
Q 000711 510 --D-LNKEIFYVPQRPYT---AVGTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEYLLDR--YPPEKEINWGDELS 580 (1338)
Q Consensus 510 --~-~~~~i~~v~Q~~~l---~~~tl~eni~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~--~~~~~~~~~g~~LS 580 (1338)
. ..+.|+|+||+|.- +..||.++|.-...... .......++..++++.+++.+-..+ +| .+||
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~~~yP--------heLS 156 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERRDRYP--------HQLS 156 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhhccCC--------cccC
Confidence 1 23679999999952 34688888763211110 0012245678899999999876554 77 6899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 581 LGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 581 gGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
||||||+.||+||..+|++||+||||.+||+.++.+|.+.+++ .|+++|+|||++..+. .||+|++|.++
T Consensus 157 GG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G 231 (539)
T COG1123 157 GGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKG 231 (539)
T ss_pred chHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECC
Confidence 9999999999999999999999999999999999999998764 5999999999999885 79999999863
No 23
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=5.2e-60 Score=608.83 Aligned_cols=529 Identities=17% Similarity=0.192 Sum_probs=400.8
Q ss_pred HHHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 87 SLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKY 166 (1338)
Q Consensus 87 ~l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (1338)
.+++++++++++++ . ++..++++++.+.+.+..|.+.+.++|.+....... .++...+.++++.++..+..|
T Consensus 143 ~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~---~l~~~~~~~~~~~~~~~~~~~ 214 (708)
T TIGR01193 143 SLLKFIPLITRQKK----L-IVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMG---TLGIISIGLIIAYIIQQILSY 214 (708)
T ss_pred hHHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChH---HHHHHHHHHHHHHHHHHHHHH
Confidence 35667777777655 2 555666677788888899999999999876443211 112122222223344566777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 000711 167 ITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSY 245 (1338)
Q Consensus 167 l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~ 245 (1338)
+++++..++..++..+++.++|+++...|+++++++ .++..+|++ |++.+.+.+...+...+..++..+++... +++
T Consensus 215 ~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-l~~ 292 (708)
T TIGR01193 215 IQIFLLNVLGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLF-LVR 292 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 888888888888999999999999999999999765 678999997 88887776665554444443333333333 345
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 000711 246 ASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMR 325 (1338)
Q Consensus 246 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~ 325 (1338)
++|.+++++++.+++..++..++.++..+...+.++..++....+.+..+++++||.+++|+.+.+++.+.+.+..+...
T Consensus 293 ~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 372 (708)
T TIGR01193 293 QNMLLFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSF 372 (708)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 78888888877777777777778888888888888888888888888888999999999999999999888887766544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--HhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 326 VVLHDHWWFGMIQDFLLKYLGATVAVILIIEP--FFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRL 403 (1338)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l 403 (1338)
+..+.......+..++.. + ....+++++. ++.| ..+.|.. ++. ..+...++.++.++...+.++
T Consensus 373 ~~~~~~~~~~~~~~~~~~-~--~~i~il~~g~~lv~~g-----~ls~G~l--va~----~~l~~~~~~pl~~l~~~~~~~ 438 (708)
T TIGR01193 373 KYQKADQGQQAIKAVTKL-I--LNVVILWTGAYLVMRG-----KLTLGQL--ITF----NALLSYFLTPLENIINLQPKL 438 (708)
T ss_pred HHHHHHHHHHHHHHHHHH-H--HHHHHHHHHHHHHHcC-----CCCHHHH--HHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 433322222222222111 1 1111111111 1223 3356543 322 234455667888888999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCc
Q 000711 404 NRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSG 483 (1338)
Q Consensus 404 ~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsG 483 (1338)
+....+.+|+.++++.+++.+.... . .......+.|+|+||+|.|++++++|+|+||+|++||+++|+||||||
T Consensus 439 ~~~~~~~~ri~~~l~~~~e~~~~~~-~-----~~~~~~~~~I~~~~vsf~y~~~~~iL~~isl~i~~G~~vaIvG~SGsG 512 (708)
T TIGR01193 439 QAARVANNRLNEVYLVDSEFINKKK-R-----TELNNLNGDIVINDVSYSYGYGSNILSDISLTIKMNSKTTIVGMSGSG 512 (708)
T ss_pred HHHHHHHHHHHHHHcCCCccccccc-c-----cCCCCCCCcEEEEEEEEEcCCCCcceeceeEEECCCCEEEEECCCCCC
Confidence 9999999999999876554321110 0 001112457999999999987778999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHH
Q 000711 484 KSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKN 557 (1338)
Q Consensus 484 KSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~ 557 (1338)
||||+++|+|+|+|++|+|.+||.+ .+++++|+||||+|++|+|||+|||.++... ..+++++.++++.
T Consensus 513 KSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~-----~~~~~~i~~a~~~ 587 (708)
T TIGR01193 513 KSTLAKLLVGFFQARSGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKE-----NVSQDEIWAACEI 587 (708)
T ss_pred HHHHHHHHhccCCCCCcEEEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCC-----CCCHHHHHHHHHH
Confidence 9999999999999999999999976 3567899999999999999999999997421 2578899999999
Q ss_pred cCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc-cCCeEEEEec
Q 000711 558 VDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA-MGTSCITISH 633 (1338)
Q Consensus 558 ~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~-~~~t~i~itH 633 (1338)
++++++++++|.+.++ ++|.+||||||||++||||++++|+++|||||||+||+++|+.+++.+++ .++|+|+|||
T Consensus 588 a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~~~~T~IiitH 667 (708)
T TIGR01193 588 AEIKDDIENMPLGYQTELSEEGSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNLQDKTIIFVAH 667 (708)
T ss_pred hCCHHHHHhcccccCcEecCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCEEEEEec
Confidence 9999999999986554 57899999999999999999999999999999999999999999999876 4899999999
Q ss_pred ChhhHhhcceEEEccCC
Q 000711 634 RPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 634 ~~~~~~~~d~i~~l~~~ 650 (1338)
|+++++.+|+|++|+++
T Consensus 668 r~~~~~~~D~i~~l~~G 684 (708)
T TIGR01193 668 RLSVAKQSDKIIVLDHG 684 (708)
T ss_pred chHHHHcCCEEEEEECC
Confidence 99999999999999863
No 24
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=1.3e-59 Score=593.84 Aligned_cols=565 Identities=37% Similarity=0.629 Sum_probs=420.2
Q ss_pred HHhHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 742 VADMFKVLVPTVFDKQGAQLLAVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAASSFIAPSIRHL 821 (1338)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 821 (1338)
+..+++.+.|.+..+..+.++..++..+...+++..++.+.+..++.....+...|...+..+++..++..++..+..++
T Consensus 79 ~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~ 158 (659)
T TIGR00954 79 LDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYL 158 (659)
T ss_pred HHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456666677665555555555555566666776666666666655555555555544444444455555666677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhc
Q 000711 822 TARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKALTG 901 (1338)
Q Consensus 822 ~~~~~~~~r~~l~~~l~~~~l~~~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~~~~i~~~~~~l~~v~~ 901 (1338)
..++...||.+++.++++.++++..+|+........+|+++|+++|++.+...+...+..++.++++++++...+.....
T Consensus 159 ~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~ 238 (659)
T TIGR00954 159 LKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDSRIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALG 238 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 88889999999999999999998777776544446789999999999999999998888888888777766665554233
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHHHHHHHHHHHHHHHHHHHH
Q 000711 902 QRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLLL 981 (1338)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e~~~~~~~~~~~~~~~~~~ 981 (1338)
+....++++++++.....+.+.+++.....+.++.++.++..+.+...++|+|++|+++..+.+.+.+.++++.+.....
T Consensus 239 ~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~ 318 (659)
T TIGR00954 239 SVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLI 318 (659)
T ss_pred hHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455566666677788889999999999999999999999999999999999999999999999999999888777
Q ss_pred HHHHHHhhhhhHHHHhhhhhHHHHH-HHHHHHHhhcccchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 982 LKKKWLFGILDDFVTKQLPHNVTWG-LSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVELS 1060 (1338)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1060 (1338)
.+...++..+..++.......+.+. .+..+.. ..+......+.|.+...+..........+.+++.+......++++.
T Consensus 319 ~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~-~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~ 397 (659)
T TIGR00954 319 IKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFD-KTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLA 397 (659)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666666555444432111111111 1111111 0000000012343332222222334556778889999999999999
Q ss_pred hHHhHHHHHHHHHhhcCCCC----CCccCC--------ccCCCC---CCCCCCceEEeeeEEeCCCccccccccceEEeC
Q 000711 1061 GGINRIFELEELLDAAQPGD----DEISGS--------SQHKWN---STDYQDSISFSKLDIITPSQKLLARQLTFEIVP 1125 (1338)
Q Consensus 1061 ~a~~Ri~~~~~~~~~~~~~~----~~~~~~--------~~~~wp---~~~~~g~I~f~nV~f~yp~~~~vL~~lsf~I~~ 1125 (1338)
++.+||.++.+.+++.+... ...... .+..++ .....+.|+|+||+++||+++++|+|+||+|++
T Consensus 398 ~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~~~il~~isl~i~~ 477 (659)
T TIGR00954 398 GFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNGDVLIESLSFEVPS 477 (659)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCCCeeeecceEEECC
Confidence 99999999988765432110 000000 000010 011246799999999998777899999999999
Q ss_pred CCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHH
Q 000711 1126 GKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRA 1205 (1338)
Q Consensus 1126 GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a 1205 (1338)
||+++|+||||||||||+++|.|+|+|++|+|.+|+ |.+++||||+|++|++|++|||.||....+.
T Consensus 478 Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~---------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~---- 544 (659)
T TIGR00954 478 GNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA---------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDM---- 544 (659)
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC---------CCcEEEECCCCCCCCcCHHHHHhcCCChhhh----
Confidence 999999999999999999999999999999999874 3579999999999999999999887532110
Q ss_pred HhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCC
Q 000711 1206 LKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNA 1285 (1338)
Q Consensus 1206 ~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSa 1285 (1338)
..+...++++.++++.+++.+++++ |.||||..+|+.+||||||||++||||++++|+++|||||||+
T Consensus 545 -----------~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~~~~~LSgGqkQRl~iARal~~~p~illLDEpts~ 612 (659)
T TIGR00954 545 -----------KRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQDWMDVLSGGEKQRIAMARLFYHKPQFAILDECTSA 612 (659)
T ss_pred -----------hccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccccccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccC
Confidence 0011235667888999999988877 8899999889999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEeccCCCCcccccceEEEecCCCCeEE
Q 000711 1286 TSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNWEL 1333 (1338)
Q Consensus 1286 LD~~te~~i~~~~~~~~~TvI~IAHRl~~i~~~d~~l~l~~g~g~~~~ 1333 (1338)
||+++++.+++.+++.|+|+|+|+||++++++||++++| +|+|+|++
T Consensus 613 LD~~~~~~l~~~l~~~~~tvI~isH~~~~~~~~d~il~l-~~~g~~~~ 659 (659)
T TIGR00954 613 VSVDVEGYMYRLCREFGITLFSVSHRKSLWKYHEYLLYM-DGRGGYQF 659 (659)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEeCchHHHHhCCEEEEE-eCCCCccC
Confidence 999999999998877899999999999999999999999 79999985
No 25
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.2e-59 Score=587.14 Aligned_cols=515 Identities=19% Similarity=0.187 Sum_probs=369.8
Q ss_pred HHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 89 QVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYIT 168 (1338)
Q Consensus 89 ~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 168 (1338)
++++++++|+++. ++..+++.++.+.+.+..|.+.+.++|.+...+. .+ . +...++.+++..++..+..|+.
T Consensus 2 ~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~ 73 (529)
T TIGR02868 2 LRILPLLQPRTRR-----LVVAILLGALALGSAVALLGVSAWLISRAAEMPP-VL-Y-LSVAAVAVRAFGIGRAVFRYLE 73 (529)
T ss_pred hhHHHHHHhhHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hH-H-HHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777776652 4555666777778888899999999987765432 11 1 1111111112233455667777
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhch
Q 000711 169 GTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYAS 247 (1338)
Q Consensus 169 ~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~ 247 (1338)
.++..+...++..++|.+.|++....+.+++++. .++..+|+++|++.+.+.+...+..++..++..+.+. .++++++
T Consensus 74 ~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~ 152 (529)
T TIGR02868 74 RLVGHDAALRSLGRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAV-AAIALLS 152 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHh
Confidence 7777777777889999999999999999998764 6799999999999988877766666555554443333 2344678
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Q 000711 248 PKYVFWILAYVLGAGTMMRNFSPAF-GKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRV 326 (1338)
Q Consensus 248 ~~l~~~~l~~~~~~~~~~~~~~~~~-~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~ 326 (1338)
|.+++++++.+++..++..++.++. .+...+.++..+++.....+..+++++||.|+.|+.+.+++++..++..+...+
T Consensus 153 ~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (529)
T TIGR02868 153 VPAALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERR 232 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHH
Confidence 8888777666555544444444443 334455566667777778888889999999999999997777666555443332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccc-cCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 327 VLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNL-KPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNR 405 (1338)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~ 405 (1338)
. .+..+................+++ +++.. ..+..+.|.. .+. ..+...++.++..+...+..+++
T Consensus 233 ~---~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~g~~t~g~l--~~~----~~~~~~~~~~~~~l~~~~~~~~~ 299 (529)
T TIGR02868 233 A---ARATGLGAAAQLLAAGLAVLGALW----AGGPAVADGTLAPATL--AVL----VLLPLAAFEAFAPLPAAAQALTR 299 (529)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhCCCCChhHH--HHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 222222222211111111111111 22211 1122344432 222 22333455567777777888899
Q ss_pred HHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHH
Q 000711 406 LSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKS 485 (1338)
Q Consensus 406 ~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKS 485 (1338)
...+.+|+.++++.+++.+..+.. .. .......+.|+|+||+|.|++++++|+|+||++++||+++|+||||||||
T Consensus 300 ~~~~~~ri~~~l~~~~~~~~~~~~--~~--~~~~~~~~~I~~~~vsf~Y~~~~~vL~~isl~i~~G~~vaIvG~SGsGKS 375 (529)
T TIGR02868 300 VRAAAERIEEVTGAKGPRPEGVVP--AA--GALGLGKPTLELRDLSFGYPGSPPVLDGVSLDLPPGERVAILGPSGSGKS 375 (529)
T ss_pred HHHHHHHHHHHhcCCCCcCCCCCC--CC--cccCCCCceEEEEEEEEecCCCCceeecceEEEcCCCEEEEECCCCCCHH
Confidence 999999999998765442211100 00 00111235699999999998767899999999999999999999999999
Q ss_pred HHHHHHcCCCCCCccEEEeCCCC-----ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCC
Q 000711 486 SLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDL 560 (1338)
Q Consensus 486 TLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l 560 (1338)
||+++|+|+|+|++|+|.+||.+ .+++++|+||||+|++|++||+|||.++.+ ..++++++++++.+++
T Consensus 376 TLl~lL~g~~~p~~G~I~i~g~~i~~~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~------~~~~e~i~~al~~a~l 449 (529)
T TIGR02868 376 TLLMLLTGLLDPLQGEVTLDGVSVSSLQDELRRRISVFAQDAHLFDTTVRDNLRLGRP------DATDEELWAALERVGL 449 (529)
T ss_pred HHHHHHhcCCCCCCcEEEECCEEhhhHHHHHHhheEEEccCcccccccHHHHHhccCC------CCCHHHHHHHHHHcCC
Confidence 99999999999999999999976 245678999999999999999999999853 2578899999999999
Q ss_pred chHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecCh
Q 000711 561 EYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRP 635 (1338)
Q Consensus 561 ~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~ 635 (1338)
+++++++|++.++ ++|.+||||||||++||||++++|+++|||||||+||+++|+.+++.+.+ .++|+|+||||+
T Consensus 450 ~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 450 ADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999987665 57889999999999999999999999999999999999999999999976 489999999995
No 26
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.6e-59 Score=602.36 Aligned_cols=525 Identities=20% Similarity=0.198 Sum_probs=394.0
Q ss_pred HHHHHHH-HhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhc-ChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 88 LQVLAAI-LLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLR-RVPLFFQLISENILLCFLLSTMHSTSK 165 (1338)
Q Consensus 88 l~~l~~~-~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1338)
++++++. ++++++ . ++..++++++...+++..|...+.++|.+... +...++ ..++.++++.++..+..
T Consensus 123 ~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~----~~~~~~~~~~~~~~~~~ 193 (686)
T TIGR03797 123 LRDLLRFALRGARR----D-LLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLV----QIALALLAAAVGAAAFQ 193 (686)
T ss_pred HHHHHHHHHhhHHH----H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHH----HHHHHHHHHHHHHHHHH
Confidence 3445554 344433 2 55666677888888889999999999987643 322222 22222223334455667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000711 166 YITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCS 244 (1338)
Q Consensus 166 ~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 244 (1338)
|++.++..+....+..+++.++|+++...|+++++++ .++..+|++ |++.+.+.+...+...+..++..+.+. .+++
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~l~ 271 (686)
T TIGR03797 194 LAQSLAVLRLETRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNL-GLMF 271 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 7777777777777999999999999999999998765 578889997 788777666555444433333333333 3345
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 000711 245 YASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHM 324 (1338)
Q Consensus 245 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~ 324 (1338)
+++|.+++++++.+++..++..++.++..+...+.++.+++......+...++++||.++.|+.+.+++.+.+++..+..
T Consensus 272 ~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~ 351 (686)
T TIGR03797 272 YYSWKLALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLE 351 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 56888888777666666666667788888888888888888888888888899999999999999998888888777655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 325 RVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLN 404 (1338)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~ 404 (1338)
.+..+...+...+..++. ......+++++.++ ...+..+.|.. ++. ..++..++.++.++...+.+++
T Consensus 352 ~~~~~~~~~~~~~~~~i~---~~~~~~il~~g~~l---v~~g~ltiG~l--va~----~~l~~~~~~pl~~l~~~~~~~~ 419 (686)
T TIGR03797 352 LSAQRIENLLTVFNAVLP---VLTSAALFAAAISL---LGGAGLSLGSF--LAF----NTAFGSFSGAVTQLSNTLISIL 419 (686)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH---HHcCCCCHHHH--HHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 554433333333322221 11111112211111 01123356543 222 2334456678888888999999
Q ss_pred HHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCc
Q 000711 405 RLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSG 483 (1338)
Q Consensus 405 ~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~~sl~i~~G~~~~i~G~sGsG 483 (1338)
+...+.+|+.++++.+++.+.. .. ......+.|+|+||+|.|++ ++++|+|+||+|++||+++|+||||||
T Consensus 420 ~~~~~~~ri~~~l~~~~e~~~~-~~-------~~~~~~~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsG 491 (686)
T TIGR03797 420 AVIPLWERAKPILEALPEVDEA-KT-------DPGKLSGAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSG 491 (686)
T ss_pred HHHHHHHHHHHHhcCCcccccC-cC-------CCCCCCceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCC
Confidence 9999999999998765442211 00 00012357999999999964 578999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHH
Q 000711 484 KSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKN 557 (1338)
Q Consensus 484 KSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~ 557 (1338)
||||+|+|+|+|+|++|+|.+||.+ .+++++|+||||+|++|+||++|||.++.+ .+++++.++++.
T Consensus 492 KSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-------~~~e~i~~al~~ 564 (686)
T TIGR03797 492 KSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-------LTLDEAWEAARM 564 (686)
T ss_pred HHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-------CCHHHHHHHHHH
Confidence 9999999999999999999999975 346789999999999999999999999743 467899999999
Q ss_pred cCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHccCCeEEEEecC
Q 000711 558 VDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHR 634 (1338)
Q Consensus 558 ~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~itH~ 634 (1338)
++++++++++|.+.++ +.|.+||||||||++||||++++|+++|||||||+||+++|+++++.+++.++|+|+||||
T Consensus 565 a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~~~T~IiItHr 644 (686)
T TIGR03797 565 AGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERLKVTRIVIAHR 644 (686)
T ss_pred cCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHhCCeEEEEecC
Confidence 9999999999987655 5788999999999999999999999999999999999999999999999888999999999
Q ss_pred hhhHhhcceEEEccCC
Q 000711 635 PALVAFHDVVLSLDGE 650 (1338)
Q Consensus 635 ~~~~~~~d~i~~l~~~ 650 (1338)
+++++.+|+|++|+++
T Consensus 645 ~~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 645 LSTIRNADRIYVLDAG 660 (686)
T ss_pred hHHHHcCCEEEEEECC
Confidence 9999999999999873
No 27
>KOG0064 consensus Peroxisomal long-chain acyl-CoA transporter, ABC superfamily [Lipid transport and metabolism]
Probab=100.00 E-value=8.1e-61 Score=537.35 Aligned_cols=568 Identities=35% Similarity=0.625 Sum_probs=459.0
Q ss_pred hhHHhHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 740 LRVADMFKVLVPTVFDKQGAQLLAVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAASSFIAPSIR 819 (1338)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 819 (1338)
.++..+.++.+|..+.+..+++..-.+.+.+++|++.+++.++|..+.....++...|...++-.+++++..++++...+
T Consensus 99 k~l~~L~Kilip~vfc~e~gll~~hs~~Li~RTfLSl~VA~LdGqlVk~Ivrk~~r~F~~~LlkW~liaiPAtFvNS~Ir 178 (728)
T KOG0064|consen 99 KRLNVLSKILIPTVFCKETGLLTAQSFFLISRTFLSLFVAKLDGQLVKNIVRKRGRQFLWDLLKWFLIAIPASFVNSAIR 178 (728)
T ss_pred HHHHHHHHHhcchHHHHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHhhhccHHHHHHHHH
Confidence 34556778889988888888888888888999999999999999999888888888887666666777788888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHh
Q 000711 820 HLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKAL 899 (1338)
Q Consensus 820 ~~~~~~~~~~r~~l~~~l~~~~l~~~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~~~~i~~~~~~l~~v 899 (1338)
++...+++..|.++.+|+.+.||.+..||++.++.+...|+||++|+|+..+.+..+.+...+..|+++++.++..|.-.
T Consensus 179 yle~klaLafrtrL~~h~y~~Y~snqTyY~Vsn~d~~i~n~D~sLTeDI~~Fs~svahLysnLtKP~lDl~l~s~~L~~s 258 (728)
T KOG0064|consen 179 YLESKLALAFRTRLTRHAYDMYLSNQTFYKVSNLDSVIENADNSLTEDIAKFSDSVAHLYSNLTKPVLDLILISFTLLDS 258 (728)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCceEEEecccchhcCccchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888877654
Q ss_pred hchh---hHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHHHHHHHHHHHHHHH
Q 000711 900 TGQR---GVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLE 976 (1338)
Q Consensus 900 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e~~~~~~~~~~~~~ 976 (1338)
.... +..++...+.+...+++.+.|+|+++..+..+.++.+|+.|+++.++.|.|++|+|...|.+.++..|..+.+
T Consensus 259 ~~s~g~~~~~~~~lvv~lTa~iLr~~sP~Fg~Lv~eeA~r~g~lr~~Hs~ii~NsEEIAfy~GhkvE~~ql~~sy~~L~~ 338 (728)
T KOG0064|consen 259 ATSVGAAGITLAGLVVYLTAFILRAVSPKFGKLVAEEAARKGYLRYLHSNIITNSEEIAFYGGHKVELTQVDESYNRLVE 338 (728)
T ss_pred hccccccchhhhhhHHHHHHHHHHHhCCchhhHHHHHHhhccHHHHHHHHHhccHHHHHhhcccHHHHHHHHHHHHHHHH
Confidence 4322 2223444455566788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhHHHHhhhhhHHHHHH-H--HHHHHhhcccc-----hhhhchHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 977 HSLLLLKKKWLFGILDDFVTKQLPHNVTWGL-S--LLYAMEHKGDR-----ALVSTQGELAHALRFLASVVSQSFLAFGD 1048 (1338)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~-----~~~~~~g~l~~~l~~~~~~~~~~~~~~~~ 1048 (1338)
+.....+.+.|+.++..|+.+...+...... + .+.+....... ..++...++..+-+.+ .....++..
T Consensus 339 qm~li~k~r~~YiMleqF~mKYvWsg~GlvmvsiPI~~~t~~s~~~~~~~e~~~srt~~f~t~r~LL----~saAdAieR 414 (728)
T KOG0064|consen 339 QMNLIFKVRLWYIMLEQFVMKYTWSGTGLVMVSIPILTSTLASEGTLQLSEEGNSRTKEFITNRRLL----LSAADAIER 414 (728)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeeeecccCCCCcccccccchhHHHHHHHHHHHH----HHHHHHHHH
Confidence 8888888888888877777654322111000 0 00000000000 0011111222222222 223346677
Q ss_pred HHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccC-------------CccCCCCC---CCCCCceEEeeeEEeCCCc
Q 000711 1049 ILELHRKFVELSGGINRIFELEELLDAAQPGDDEISG-------------SSQHKWNS---TDYQDSISFSKLDIITPSQ 1112 (1338)
Q Consensus 1049 ~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~-------------~~~~~wp~---~~~~g~I~f~nV~f~yp~~ 1112 (1338)
+...++.++++.+...|++++.+..++...+...... .....-|. ......|.++||..-.|+.
T Consensus 415 lMssyKeItqLaGyt~Rv~~mf~v~~dv~~g~~~k~~v~e~~~~~~~~e~r~s~~l~~~~~i~~~~gI~lenIpvItP~~ 494 (728)
T KOG0064|consen 415 LMSSYKEITQLAGYTNRVFTMFSVLHDVHKGNYNKTAVPEILSSRTIDESRNSNPLPTTDAIRNFNGIILENIPVITPAG 494 (728)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhcccccccccCchhhccCccccccCCcCCccchhhcccceEEecCceeccCc
Confidence 8888899999999999999877665543322111000 00000000 1123469999999999999
Q ss_pred cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcCCCCCCCCCHHHHh
Q 000711 1113 KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQRPYTCLGTLRDQI 1192 (1338)
Q Consensus 1113 ~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQdP~LF~GTIReNL 1192 (1338)
..|...+||.|+||..+.|.||+|||||||++.|-|+||...|...++-. .+|.||||.||+--||+||+|
T Consensus 495 ~vvv~~Ltf~i~~G~hLLItGPNGCGKSSLfRILggLWPvy~g~L~~P~~---------~~mFYIPQRPYms~gtlRDQI 565 (728)
T KOG0064|consen 495 DVLVPKLTFQIEPGMHLLITGPNGCGKSSLFRILGGLWPVYNGLLSIPRP---------NNIFYIPQRPYMSGGTLRDQI 565 (728)
T ss_pred ceeecceeEEecCCceEEEECCCCccHHHHHHHHhccCcccCCeeecCCC---------cceEeccCCCccCcCccccee
Confidence 89999999999999999999999999999999999999999999988753 569999999999999999999
Q ss_pred cCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCChhHHHHHHHHHHhhc
Q 000711 1193 IYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRLGMARLFFH 1272 (1338)
Q Consensus 1193 ~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr 1272 (1338)
.||++.++--. ....|.++..+|..|+|.+.+++. +|||...+|-+.||||||||+++||.+.|
T Consensus 566 IYPdS~e~~~~---------------kg~~d~dL~~iL~~v~L~~i~qr~-~g~da~~dWkd~LsgGekQR~~mARm~yH 629 (728)
T KOG0064|consen 566 IYPDSSEQMKR---------------KGYTDQDLEAILDIVHLEHILQRE-GGWDAVRDWKDVLSGGEKQRMGMARMFYH 629 (728)
T ss_pred ecCCcHHHHHh---------------cCCCHHHHHHHHHHhhHHHHHHhc-cChhhhccHHhhccchHHHHHHHHHHHhc
Confidence 99998654211 134688899999999999988885 78999999999999999999999999999
Q ss_pred CCCEEEeecCCCCCCHHHHHHHHHHHHhcCCeEEEeccCCCCcccccceEEEecCCCCeEEecCC
Q 000711 1273 KPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNWELRTIS 1337 (1338)
Q Consensus 1273 ~p~ILiLDEATSaLD~~te~~i~~~~~~~~~TvI~IAHRl~~i~~~d~~l~l~~g~g~~~~~~~~ 1337 (1338)
+|+..+|||||||+..|.|..|.+.++..|.+.|+|+||+++++||...|.+ ||+|+|++++..
T Consensus 630 rPkyalLDEcTsAvsidvE~~i~~~ak~~gi~llsithrpslwk~h~~ll~~-dg~g~~q~~~ln 693 (728)
T KOG0064|consen 630 RPKYALLDECTSAVSIDVEGKIFQAAKDAGISLLSITHRPSLWKYHTHLLEF-DGEGGWQFRALN 693 (728)
T ss_pred CcchhhhhhhhcccccchHHHHHHHHHhcCceEEEeecCccHHHHHHHHHhc-cCCCCeeeccCC
Confidence 9999999999999999999999999988999999999999999999999999 999999998753
No 28
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2.6e-59 Score=601.08 Aligned_cols=527 Identities=18% Similarity=0.210 Sum_probs=396.6
Q ss_pred HHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhc-ChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 88 LQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLR-RVPLFFQLISENILLCFLLSTMHSTSKY 166 (1338)
Q Consensus 88 l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (1338)
++++++.++++++. +...++++++.+.+.+..|...+.++|.+... +...++ ..++.++++.++..+..|
T Consensus 135 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~ 205 (694)
T TIGR03375 135 KHWFWSTLKESWPL-----YRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLW----VLAIGVALAIVFDFVLKT 205 (694)
T ss_pred chHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHH----HHHHHHHHHHHHHHHHHH
Confidence 45566777666552 55556667777788888999999999876633 222222 122222223334556677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccCCCCCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Q 000711 167 ITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYA 246 (1338)
Q Consensus 167 l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~ 246 (1338)
++.++..+....+..+++.++|+|+...|+++.....++..+|+ +|++.+.+.+...+...+..++..+.+.. +++++
T Consensus 206 ~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~-~l~~~ 283 (694)
T TIGR03375 206 LRSYFLDVAGKKADLILSAKLFERVLGLRMEARPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLL-VIAII 283 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHH-HHHHH
Confidence 77777777777799999999999999999998444467888998 89998887766555444444443333333 34467
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Q 000711 247 SPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRV 326 (1338)
Q Consensus 247 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~ 326 (1338)
+|.+++++++.+++..++..++.++..+...+.++.+++......+...++++||.|+.|+.+.+++.+.+++..+...+
T Consensus 284 ~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 363 (694)
T TIGR03375 284 GGPLVWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLK 363 (694)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHH
Confidence 88888888777777776777788888888888888888888888888889999999999999999888888777665544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccc-CCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 327 VLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNR 405 (1338)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~ 405 (1338)
..+.......+..++. ......+++ +++.+. .+..+.|.. ++ +..++..++.++..+...+..++.
T Consensus 364 ~~~~~~~~~~~~~~~~---~~~~~~il~----~g~~~v~~g~ls~G~l--~a----~~~~~~~~~~p~~~l~~~~~~~~~ 430 (694)
T TIGR03375 364 SRFLSNLATNFAQFIQ---QLVSVAIVV----VGVYLISDGELTMGGL--IA----CVMLSGRALAPLGQLAGLLTRYQQ 430 (694)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHH----HHHHHHHcCCCCHHHH--HH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333222222222211 111111111 111111 123355543 32 223445566788888888899999
Q ss_pred HHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCcH
Q 000711 406 LSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGK 484 (1338)
Q Consensus 406 ~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~~sl~i~~G~~~~i~G~sGsGK 484 (1338)
...+.+|+.++++.+++.+..... .......+.|+|+||+|.||+ ++++|+|+||+|++||+++|+|||||||
T Consensus 431 ~~~~~~ri~~il~~~~e~~~~~~~------~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGK 504 (694)
T TIGR03375 431 AKTALQSLDELMQLPVERPEGTRF------LHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGK 504 (694)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCC------CCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCH
Confidence 999999999999875542211000 000112357999999999985 4689999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHc
Q 000711 485 SSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNV 558 (1338)
Q Consensus 485 STLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~ 558 (1338)
|||+++|+|+|+|++|+|.+||.+ .+++++|+||||+|++|++|++|||.++.+ ..+++++.++++.+
T Consensus 505 STLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~------~~~~~~i~~a~~~~ 578 (694)
T TIGR03375 505 STLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAP------YADDEEILRAAELA 578 (694)
T ss_pred HHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCC------CCCHHHHHHHHHHc
Confidence 999999999999999999999975 356789999999999999999999999754 25789999999999
Q ss_pred CCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEec
Q 000711 559 DLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISH 633 (1338)
Q Consensus 559 ~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH 633 (1338)
+++++++++|.+.++ ++|.+||||||||++||||++++|+++|||||||+||+++|+.+++.+.+ .++|+|+|||
T Consensus 579 ~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItH 658 (694)
T TIGR03375 579 GVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTH 658 (694)
T ss_pred ChHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 999999999986554 57899999999999999999999999999999999999999999999876 3899999999
Q ss_pred ChhhHhhcceEEEccCC
Q 000711 634 RPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 634 ~~~~~~~~d~i~~l~~~ 650 (1338)
|+++++.||+|++|+++
T Consensus 659 rl~~~~~~D~iivl~~G 675 (694)
T TIGR03375 659 RTSLLDLVDRIIVMDNG 675 (694)
T ss_pred CHHHHHhCCEEEEEeCC
Confidence 99999999999999863
No 29
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=2.1e-59 Score=556.09 Aligned_cols=510 Identities=27% Similarity=0.449 Sum_probs=407.8
Q ss_pred HHHHHhhcchHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccchhhcccC
Q 000711 775 SDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMS 854 (1338)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~~~ff~~~~~~ 854 (1338)
..+++.+++..++.+...+...|+..+.++...++..........++..++..+||++|++++++.||.+..||+....+
T Consensus 63 ~v~~~~w~~~~~~aL~~~d~~~f~~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~ 142 (604)
T COG4178 63 QVLLNDWNGPFYNALARRDLAAFWQQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAG 142 (604)
T ss_pred eeeeHhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcc
Confidence 33445556667777777888888888888887777777777778889999999999999999999999999999988776
Q ss_pred --CCCCCccchhHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhchh--------------hHHHHHHHHHHHHHH
Q 000711 855 --SKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKALTGQR--------------GVAILYAYMLLGLGF 918 (1338)
Q Consensus 855 --~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~~~~i~~~~~~l~~v~~~~--------------~~~~~~~~~~~~~~~ 918 (1338)
...+|||||+.+|+..+.+....+..+++.++++++.|+..|+-+++.. .+.+++.|++++...
T Consensus 143 ~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~ 222 (604)
T COG4178 143 GIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLL 222 (604)
T ss_pred cccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHH
Confidence 4558999999999999999999999999999888888877777554321 234456677777777
Q ss_pred HHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---hHHH
Q 000711 919 LRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLLLLKKKWLFGIL---DDFV 995 (1338)
Q Consensus 919 ~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 995 (1338)
..++++++..++.+.+++|+.||+.+.++++++|+|++|+||..|++.+..+|....++......+...+..+ ..++
T Consensus 223 ~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~ 302 (604)
T COG4178 223 THLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWL 302 (604)
T ss_pred HHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHH
Confidence 7789999999999999999999999999999999999999999999999999999999887666544333222 1122
Q ss_pred HhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhh
Q 000711 996 TKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDA 1075 (1338)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~ 1075 (1338)
+. .+.+..... ....|. .+.|.++. ....+.+....++++...+..++++.+.+.|+.++.+..+.
T Consensus 303 s~----v~P~li~ap--~~f~g~----i~~G~lmq----a~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~ 368 (604)
T COG4178 303 SV----VLPILIAAP--RYFSGQ----ITFGGLMQ----AVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEA 368 (604)
T ss_pred HH----HHHHHhccH--hhhcCc----ChHHHHHH----HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 111111100 011111 12333332 33455666778899999999999999999999999877653
Q ss_pred cCCCCCCccCCc-cCCCCCCCCCCceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCC
Q 000711 1076 AQPGDDEISGSS-QHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVS 1154 (1338)
Q Consensus 1076 ~~~~~~~~~~~~-~~~wp~~~~~g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~s 1154 (1338)
.+.+........ .-.-.... ...|.|+|++...|+..+.+++++|.|+|||++.|.|+||||||||+++|.|+||..+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~-~~~i~~~nl~l~~p~~~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~ 447 (604)
T COG4178 369 AQMDTEKPARTGRRIDFDDNA-DHGITLENLSLRTPDGQTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGS 447 (604)
T ss_pred ccCcccccCcccccccccccc-cceeEEeeeeEECCCCCeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCC
Confidence 332111110000 00000111 4689999999999998899999999999999999999999999999999999999999
Q ss_pred ceEEcCCCCCccccCCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCC
Q 000711 1155 GSLTKPSQHIDEEAGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVR 1234 (1338)
Q Consensus 1155 G~I~idg~dI~~~~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~ 1234 (1338)
|+|.++.. .++.|+||+||+..||+||.|+||.+.+ ...|+++.++|.+|+
T Consensus 448 G~I~~P~~---------~~~lflpQ~PY~p~GtLre~l~YP~~~~--------------------~~~d~~l~~vL~~vg 498 (604)
T COG4178 448 GRISMPAD---------SALLFLPQRPYLPQGTLREALCYPNAAP--------------------DFSDAELVAVLHKVG 498 (604)
T ss_pred CceecCCC---------CceEEecCCCCCCCccHHHHHhCCCCCC--------------------CCChHHHHHHHHHcC
Confidence 99998833 4689999999999999999999997531 256889999999999
Q ss_pred chhhhhhhcccCcccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCC
Q 000711 1235 LSYLLEREEVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRP 1312 (1338)
Q Consensus 1235 L~~~i~~~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl 1312 (1338)
|.++++++ |-..+|...||+|||||||+||.+|+|||+++|||||||||.++|..+++++++ .++|+|.|+||.
T Consensus 499 L~~L~~rl----~~~~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~l~~~lp~~tvISV~Hr~ 574 (604)
T COG4178 499 LGDLAERL----DEEDRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQLLKEELPDATVISVGHRP 574 (604)
T ss_pred cHHHHHHH----hccCcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHHHHhhCCCCEEEEeccch
Confidence 99999886 445569999999999999999999999999999999999999999999999877 799999999999
Q ss_pred CCcccccceEEEecCCCCeEE
Q 000711 1313 ALIPFHSLELRLIDGEGNWEL 1333 (1338)
Q Consensus 1313 ~~i~~~d~~l~l~~g~g~~~~ 1333 (1338)
....||++.|++ .++|.|..
T Consensus 575 tl~~~h~~~l~l-~~~~~~~~ 594 (604)
T COG4178 575 TLWNFHSRQLEL-LDDAGGQN 594 (604)
T ss_pred hhHHHHhhheee-cccccccc
Confidence 999999999999 57777754
No 30
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.4e-58 Score=584.52 Aligned_cols=531 Identities=17% Similarity=0.209 Sum_probs=391.5
Q ss_pred hHHHHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 85 LKSLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTS 164 (1338)
Q Consensus 85 ~~~l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (1338)
|+.+++++++++++++ . ++..+++.++........+.+.+.+++.+.......+...+ .+.+++..++..+.
T Consensus 10 ~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~---~~~~~~~~l~~~~~ 81 (582)
T PRK11176 10 WQTFRRLWPTIAPFKA----G-LIVAGVALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWM---PLVVIGLMILRGIT 81 (582)
T ss_pred HHHHHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHH---HHHHHHHHHHHHHH
Confidence 4445667777777654 2 34444555666666677788888888887754332222111 11122223334455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000711 165 KYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLC 243 (1338)
Q Consensus 165 ~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 243 (1338)
.|+..++..+....+..+++.+++++....+.+++++. .++..+|+++|++.+.+.+...+..++..++..+.+.. ++
T Consensus 82 ~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~-~l 160 (582)
T PRK11176 82 SFISSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFI-MM 160 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 55665566665666888899999999999999988754 67899999999999887777766666665555444433 33
Q ss_pred HhchhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 000711 244 SYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRH 323 (1338)
Q Consensus 244 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~ 323 (1338)
++++|.+++++++.+++..++..++.+++.+...+.++..+++.....+...+.++||.|+.|+.+.+++++..++..+.
T Consensus 161 ~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~ 240 (582)
T PRK11176 161 FYYSWQLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQ 240 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 45688888777776666566666777888887777777778887778888889999999999999998888877776665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccc-cCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 324 MRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNL-KPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRR 402 (1338)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 402 (1338)
..+..+...+...+..++. ......+++ +++.. ..+..+.|...+ +..++..++.++..+...+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~---~~~~~~i~~----~g~~~~~~g~is~g~~~~------~~~~~~~~~~pl~~l~~~~~~ 307 (582)
T PRK11176 241 GMKMVSASSISDPIIQLIA---SLALAFVLY----AASFPSVMDTLTAGTITV------VFSSMIALMRPLKSLTNVNAQ 307 (582)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHH----HHHHHHHcCCCCHHHHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 5444333333233222221 111111111 11111 112235554322 223344566788888889999
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCC
Q 000711 403 LNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNG 481 (1338)
Q Consensus 403 l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sG 481 (1338)
+++...+.+|+.++++.+++.+.... ......+.++++||+|.||++ +++|+|+||+|++||+++|+||||
T Consensus 308 ~~~~~~~~~ri~~~~~~~~~~~~~~~--------~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sG 379 (582)
T PRK11176 308 FQRGMAACQTLFAILDLEQEKDEGKR--------VIERAKGDIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSG 379 (582)
T ss_pred HHHHHHHHHHHHHHhcCCCcCCCCCc--------CCCCCCCeEEEEEEEEecCCCCCccccCceEEeCCCCEEEEECCCC
Confidence 99999999999998875433211000 001123469999999999864 789999999999999999999999
Q ss_pred CcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHH
Q 000711 482 SGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELL 555 (1338)
Q Consensus 482 sGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l 555 (1338)
||||||+++|+|+++|++|+|.+||.+ .++++.|+||||+|++|++|++|||.++.+. ..+++++++++
T Consensus 380 sGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~-----~~~~~~i~~al 454 (582)
T PRK11176 380 SGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTE-----QYSREQIEEAA 454 (582)
T ss_pred CCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCC-----CCCHHHHHHHH
Confidence 999999999999999999999999975 2457889999999999999999999997532 25789999999
Q ss_pred HHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEE
Q 000711 556 KNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCIT 630 (1338)
Q Consensus 556 ~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~ 630 (1338)
+.++++++++++|.+.++ ++|.+||||||||++||||++++|+++|||||||+||+++++.+++.+.+ .++|+|+
T Consensus 455 ~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~ 534 (582)
T PRK11176 455 RMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLV 534 (582)
T ss_pred HHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 999999999999976654 57889999999999999999999999999999999999999999999876 4799999
Q ss_pred EecChhhHhhcceEEEccCC
Q 000711 631 ISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 631 itH~~~~~~~~d~i~~l~~~ 650 (1338)
||||++.++.||+|++++++
T Consensus 535 VtHr~~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 535 IAHRLSTIEKADEILVVEDG 554 (582)
T ss_pred EecchHHHHhCCEEEEEECC
Confidence 99999999999999999863
No 31
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-61 Score=595.05 Aligned_cols=197 Identities=24% Similarity=0.334 Sum_probs=166.5
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC--CccEEEeCCCCc-------ccccc
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL--VSGHIAKPGVGS-------DLNKE 514 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~--~~G~i~~~~~~~-------~~~~~ 514 (1338)
.|+++|+++.|+ ++++|+|+||++++||+++|+||||||||||+|+|+|+++| ++|+|.++|.+. ..++.
T Consensus 5 ~l~~~nl~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 83 (506)
T PRK13549 5 LLEMKNITKTFG-GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERAG 83 (506)
T ss_pred eEEEeeeEEEeC-CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHCC
Confidence 689999999995 46899999999999999999999999999999999999996 899999998641 12356
Q ss_pred EEEEecCCCCCC-CCHHHHhcCCCCCC--cccC-CCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000711 515 IFYVPQRPYTAV-GTLRDQLIYPLTSD--QEVE-PLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1338)
Q Consensus 515 i~~v~Q~~~l~~-~tl~eni~~~~~~~--~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1338)
++||||+|.++. .|++||+.++.... .... ....+++.++++.+++.+..++.+ .+||||||||++||
T Consensus 84 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgGqkqrv~la 155 (506)
T PRK13549 84 IAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV--------GNLGLGQQQLVEIA 155 (506)
T ss_pred eEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch--------hhCCHHHHHHHHHH
Confidence 999999997765 59999998874321 0000 112346788899999977666654 68999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 591 Ral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|||+.+|+++||||||++||+.+...+++.+++ .|+|+|+|||+++.+. .||++++|++
T Consensus 156 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~ 218 (506)
T PRK13549 156 KALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRD 218 (506)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEEC
Confidence 999999999999999999999999999988754 4899999999999875 7999999986
No 32
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.3e-58 Score=575.55 Aligned_cols=529 Identities=19% Similarity=0.223 Sum_probs=385.7
Q ss_pred HHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCh--hHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 88 LQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAF-LRRV--PLFFQLISENILLCFLLSTMHSTS 164 (1338)
Q Consensus 88 l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 164 (1338)
+++++++++|+++. +++.+++.++.....+..|.+.+.+++... .... ..+.. ++ ..+.+++..++..+.
T Consensus 4 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~ 76 (574)
T PRK11160 4 LLPFLKLYKRHWFM-----LSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNY-ML-PAAGVRGAAIGRTAG 76 (574)
T ss_pred hHHHHHHHhhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHH-Hh-HHHHHHHHHHHHHHH
Confidence 44677777777652 555666777777888899999999998764 2221 11111 11 111222223344556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000711 165 KYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLC 243 (1338)
Q Consensus 165 ~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 243 (1338)
.|+..++..+.-..+..++|.+.|++....+..++++. .++..+|+++|++.+.+.+...+..++..++..+... .++
T Consensus 77 ~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~-~~l 155 (574)
T PRK11160 77 RYGERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLT-IGL 155 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 66666666666666889999999999999999998764 6799999999999998888777766666555543333 334
Q ss_pred HhchhhHHHHHHHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHH
Q 000711 244 SYASPKYVFWILAYVLGAGTMM-RNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTR 322 (1338)
Q Consensus 244 ~~~~~~l~~~~l~~~~~~~~~~-~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~ 322 (1338)
++++|.+++++++.+++..+++ .++.+...+...+.++..+++.....+...++++||.|+.|+.+.+++.+..++..+
T Consensus 156 ~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~ 235 (574)
T PRK11160 156 SFFDLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLA 235 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHH
Confidence 5678888887765555444333 444566666677777888888888888888999999999999999877777666555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 323 HMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRR 402 (1338)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 402 (1338)
...+..+.. +.............+..+++ +++....+..+.|.. ++.+.+. ....+.++..+...+..
T Consensus 236 ~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~----~g~~~~~g~~t~g~l--~a~~~~~---~~~~~~~~~~l~~~~~~ 303 (574)
T PRK11160 236 AQRRQANLT---GLSQALMILANGLTVVLMLW----LAAGGVGGNAQPGAL--IALFVFA---ALAAFEALMPVAGAFQH 303 (574)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHHH----HHHHHhccccchhHH--HHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 444333222 22222211111111111222 222221222344432 2221111 11223455556667778
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCC
Q 000711 403 LNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNG 481 (1338)
Q Consensus 403 l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sG 481 (1338)
+++..++.+|+.++++.+++.+..... . .....+.++|+||+|.||++ +++|+|+||++++||+++|+||||
T Consensus 304 ~~~~~~s~~ri~~ll~~~~~~~~~~~~-~------~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sG 376 (574)
T PRK11160 304 LGQVIASARRINEITEQKPEVTFPTTS-T------AAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTG 376 (574)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCccc-C------CCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCC
Confidence 889999999999999865542211000 0 01123579999999999864 689999999999999999999999
Q ss_pred CcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHH
Q 000711 482 SGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELL 555 (1338)
Q Consensus 482 sGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l 555 (1338)
||||||+++|+|+|+|++|+|.+||.+ .+++++|+||||+|++|++|++|||.++.+ ..+++++.+++
T Consensus 377 sGKSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~------~~~~~~i~~al 450 (574)
T PRK11160 377 CGKSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAP------NASDEALIEVL 450 (574)
T ss_pred CCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCC------ccCHHHHHHHH
Confidence 999999999999999999999999975 246788999999999999999999999754 25788999999
Q ss_pred HHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEE
Q 000711 556 KNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCIT 630 (1338)
Q Consensus 556 ~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~ 630 (1338)
+.+++++++++ |.+.++ +.|.+||||||||++||||++++|++++||||||+||+++++.+++.+.+ .++|+|+
T Consensus 451 ~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tvii 529 (574)
T PRK11160 451 QQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLM 529 (574)
T ss_pred HHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 99999999999 987665 46889999999999999999999999999999999999999999999875 4899999
Q ss_pred EecChhhHhhcceEEEccCC
Q 000711 631 ISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 631 itH~~~~~~~~d~i~~l~~~ 650 (1338)
||||+++++.+|+|++|+++
T Consensus 530 itHr~~~~~~~d~i~~l~~G 549 (574)
T PRK11160 530 ITHRLTGLEQFDRICVMDNG 549 (574)
T ss_pred EecChhHHHhCCEEEEEeCC
Confidence 99999999999999999863
No 33
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.3e-59 Score=599.77 Aligned_cols=455 Identities=20% Similarity=0.222 Sum_probs=313.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHccc-ccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHhH-------HHHHH
Q 000711 820 HLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPS-------VDILW 891 (1338)
Q Consensus 820 ~~~~~~~~~~r~~l~~~l~~~~l~~-~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~~-------~~i~~ 891 (1338)
++......+...+++.+++++.++. ..||+. ...+++.+|+++|++.+...+...+..++..+ +.+++
T Consensus 223 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~----~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~ 298 (711)
T TIGR00958 223 GSFNYTMARINLRIREDLFRSLLRQDLGFFDE----NKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLW 298 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC----CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444445555556655554 467763 24567899999999999877665444333322 22344
Q ss_pred HHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHHHHHHHHHH
Q 000711 892 FTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRF 971 (1338)
Q Consensus 892 ~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e~~~~~~~~ 971 (1338)
++|.++++.. +..++.........+.......+.++..+.......+...+.++|+.|+.++.+.+.+++..
T Consensus 299 ~s~~l~l~~l--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~ 370 (711)
T TIGR00958 299 LSPRLTMVTL--------INLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEAL 370 (711)
T ss_pred HhHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHH
Confidence 5666544321 11111111222222333444455555555555555666678899999999988887777776
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 972 RELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILE 1051 (1338)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~ 1051 (1338)
++..+...+..............+. .+...+.++++....... ..+.|.+..++. +..+...++..+..
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~il~~g~~lv~~g--~it~G~lva~~~----~~~~l~~~l~~l~~ 439 (711)
T TIGR00958 371 EETLQLNKRKALAYAGYLWTTSVLG-----MLIQVLVLYYGGQLVLTG--KVSSGNLVSFLL----YQEQLGEAVRVLSY 439 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHcC--CCCHHHHHHHHH----HHHHHHHHHHHHHH
Confidence 6665544333222221111111111 111111122221110000 013444433332 23455567778888
Q ss_pred HHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCC--ccccccccceEEeCCCEE
Q 000711 1052 LHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS--QKLLARQLTFEIVPGKSL 1129 (1338)
Q Consensus 1052 ~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~--~~~vL~~lsf~I~~Gekv 1129 (1338)
....+.+..++.+|+.++.+.+++.++. .. ...++ ..|.|+|+||+|.||+ ++++|+|+||+|+|||++
T Consensus 440 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~-----~~-~~~~~---~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~v 510 (711)
T TIGR00958 440 VYSGMMQAVGASEKVFEYLDRKPNIPLT-----GT-LAPLN---LEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVV 510 (711)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCC-----CC-CCCCC---CCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEE
Confidence 8888899999999999997654322110 00 01111 2578999999999986 358999999999999999
Q ss_pred EEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHh
Q 000711 1130 LVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALK 1207 (1338)
Q Consensus 1130 aIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~ 1207 (1338)
|||||||||||||+++|+|+|+|++|+|.+||+|++++ ..+|++|+||||||++|+|||||||.|+.+.
T Consensus 511 aIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~--------- 581 (711)
T TIGR00958 511 ALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTD--------- 581 (711)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCC---------
Confidence 99999999999999999999999999999999999987 4567789999999999999999999986431
Q ss_pred hhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCC
Q 000711 1208 LHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNAT 1286 (1338)
Q Consensus 1208 ~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaL 1286 (1338)
..|++++++++.++++++++++|+||||.+ ++|.+||||||||||||||++|+|+|||||||||+|
T Consensus 582 -------------~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl~~p~ILILDEpTSaL 648 (711)
T TIGR00958 582 -------------TPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALVRKPRVLILDEATSAL 648 (711)
T ss_pred -------------CCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHhcCCCEEEEEcccccc
Confidence 124556677777888888889999999998 578999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1287 SVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1287 D~~te~~i~~~~~~~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
|.++|+.+++.....++|+|+||||+++++.+|++++|++|+
T Consensus 649 D~~te~~i~~~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ 690 (711)
T TIGR00958 649 DAECEQLLQESRSRASRTVLLIAHRLSTVERADQILVLKKGS 690 (711)
T ss_pred CHHHHHHHHHhhccCCCeEEEEeccHHHHHhCCEEEEEECCE
Confidence 999999998843346899999999999999999999997654
No 34
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.4e-59 Score=589.46 Aligned_cols=467 Identities=18% Similarity=0.217 Sum_probs=310.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHh----
Q 000711 811 SSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKP---- 885 (1338)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~-~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~---- 885 (1338)
..+..+...++..+...++..++..+++++.++. ..||+. ...++..+|+++|++.+...+...+..++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~----~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~ 151 (588)
T PRK11174 76 RALLAWLRERVGFKAGQHIRQQIRQQVLDKLQQLGPAWIQG----KPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVP 151 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhcc----CCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444455555555556666666666654 356652 2346788999999999887665433333222
Q ss_pred ---HHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHH
Q 000711 886 ---SVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAR 962 (1338)
Q Consensus 886 ---~~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~ 962 (1338)
++.+++++|.++++.. + +.+.+++. .....+.......+.++..+.......+...+.++|+.|+.+..
T Consensus 152 ~~~~~~l~~~~~~l~l~~l----~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~ 223 (588)
T PRK11174 152 LLILIAVFPINWAAGLILL----G-TAPLIPLF---MALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEA 223 (588)
T ss_pred HHHHHHHHHHHHHHHHHHH----H-HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHH
Confidence 2233456777755421 1 11111111 11111112222233333333344444555667899999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHH----HHHHHHH-HH
Q 000711 963 EKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGEL----AHALRFL-AS 1037 (1338)
Q Consensus 963 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l----~~~l~~~-~~ 1037 (1338)
+.+.+++..++..+......+..........++...... .+..+.+....+. .+.|.+ .....+. ..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~----~t~G~l~~~~~~~~~~~~~~ 295 (588)
T PRK11174 224 ETESIRSASEDFRQRTMEVLRMAFLSSAVLEFFASISIA----LVAVYFGFSYLGE----LNFGHYGTGVTLFAGFFVLI 295 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHhcc----cccccccccchHHHHHHHHH
Confidence 887777766666654443333322222222111111000 0001111111111 112221 1111111 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCCcccccc
Q 000711 1038 VVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLAR 1117 (1338)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~~~~vL~ 1117 (1338)
+....+.++..+......+.+...+.+|+.++.+.+++.+. ....+ -|. ...+.|+|+||+|+|++++++|+
T Consensus 296 l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~-----~~~~~--~~~-~~~~~i~~~~vsf~~~~~~~vL~ 367 (588)
T PRK11174 296 LAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLETPLAHPQ-----QGEKE--LAS-NDPVTIEAEDLEILSPDGKTLAG 367 (588)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccC-----CCccc--cCC-CCCceEEEEeeEEeccCCCeeee
Confidence 33445667788888888888889999999999765432111 00000 010 01357999999987666678999
Q ss_pred ccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCC
Q 000711 1118 QLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYP 1195 (1338)
Q Consensus 1118 ~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p 1195 (1338)
|+||+|+|||++|||||||||||||+++|.|+| |++|+|.+||+|++++ ..+|++|+||||||+||+|||||||.|+
T Consensus 368 ~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g 446 (588)
T PRK11174 368 PLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLG 446 (588)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcC
Confidence 999999999999999999999999999999999 8999999999999988 4567789999999999999999999885
Q ss_pred CchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCC
Q 000711 1196 LSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKP 1274 (1338)
Q Consensus 1196 ~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p 1274 (1338)
.+ +..|++++++++.++++++++++|+||||.+ ++|.+||||||||||||||++++|
T Consensus 447 ~~----------------------~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~ 504 (588)
T PRK11174 447 NP----------------------DASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPC 504 (588)
T ss_pred CC----------------------CCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHHhcCC
Confidence 32 1234556666777777788888999999998 578999999999999999999999
Q ss_pred CEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1275 KFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1275 ~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
+||||||||||||.++|+.+++.+++ .++|+|+||||+++++.+|+++++++|+
T Consensus 505 ~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~ 560 (588)
T PRK11174 505 QLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQ 560 (588)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCe
Confidence 99999999999999999999887654 5899999999999999999999997763
No 35
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-60 Score=590.36 Aligned_cols=197 Identities=24% Similarity=0.276 Sum_probs=166.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-c------ccccEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-D------LNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-~------~~~~i~ 516 (1338)
.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. . .++.++
T Consensus 5 ~l~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~ 83 (510)
T PRK09700 5 YISMAGIGKSFG-PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGIG 83 (510)
T ss_pred eEEEeeeEEEcC-CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCeE
Confidence 589999999995 46899999999999999999999999999999999999999999999998641 1 234699
Q ss_pred EEecCCCCCC-CCHHHHhcCCCCCCc---cc---C-CCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHH
Q 000711 517 YVPQRPYTAV-GTLRDQLIYPLTSDQ---EV---E-PLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1338)
Q Consensus 517 ~v~Q~~~l~~-~tl~eni~~~~~~~~---~~---~-~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1338)
|+||++.++. .|++||+.++..... .. . ....+++.++++.+++.+..++.+ .+||||||||++
T Consensus 84 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgG~~qrv~ 155 (510)
T PRK09700 84 IIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV--------ANLSISHKQMLE 155 (510)
T ss_pred EEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch--------hhCCHHHHHHHH
Confidence 9999997765 599999987642110 00 0 012346778899999987766655 689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 589 lARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|||||+.+|+++||||||++||+.+...+++.+++ .|+|+|+|||+++.+. .||++++|++
T Consensus 156 ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 156 IAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKD 220 (510)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999988754 4899999999999875 7999999986
No 36
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=5.2e-58 Score=576.19 Aligned_cols=512 Identities=22% Similarity=0.300 Sum_probs=381.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHTR 186 (1338)
Q Consensus 107 l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~R~~lt~~l~~~ 186 (1338)
+...+++.++...++...|.+.+.+++.+. .+.......+...+++.++..++.....|+...+. ..+...++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~~~~~~lr~~ 90 (567)
T COG1132 16 LLLAILLLLLSALLSLLLPLLIGRIIDALL-ADLGELLELLLLLLLLALLGGVLRALQSYLGSRLG----QKIVADLRRD 90 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 555566667777888899999999999888 33344344333333333333334444555555555 4588899999
Q ss_pred HhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH
Q 000711 187 YFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTMM 265 (1338)
Q Consensus 187 ~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~~~ 265 (1338)
++++..+.+++++++. .++..+|+++|++.+...+......+...++..+. ...+++..+|.+++++++.+++..++.
T Consensus 91 ~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~l~~~~~~~~~~~~~ 169 (567)
T COG1132 91 LFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIG-SLVLLFSLSWRLALILLLILPLLALVL 169 (567)
T ss_pred HHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHH-HHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999876 57999999999999877766653333323332222 223445668888888877777777777
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 266 RNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYL 345 (1338)
Q Consensus 266 ~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (1338)
.+++++..+...+.++..++......+..++.+.|+.|+.|+.+.+++.+..++..+...+. ..+.+...+......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 246 (567)
T COG1132 170 SLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRA---SRLEALLAPLMLLLS 246 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 77776667777777777788888788888899999999999999765555554444432221 222222222221111
Q ss_pred HHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 000711 346 GATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSI 425 (1338)
Q Consensus 346 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~~~~~~~~~ 425 (1338)
......++++..+. ...+..+.|.. .+ +..++..++.++..+...+..+++...+++|++++++.+++...
T Consensus 247 ~~~~~~~~~~~~~~---~~~~~~~~g~~--~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 317 (567)
T COG1132 247 SLGTVLVLALGGFL---VLSGSLTVGAL--AA----FILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVED 317 (567)
T ss_pred HHHHHHHHHHHHHH---HHcCCCCHhHH--HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC
Confidence 22222222211111 01111244432 22 33455666678888999999999999999999999987554332
Q ss_pred cCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeC
Q 000711 426 EDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKP 505 (1338)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~ 505 (1338)
.... .....+.|+|+||+|.|++++++|+|+||++++||+++|+||||||||||+++|+|+|+|++|+|.+|
T Consensus 318 ~~~~--------~~~~~~~I~f~~vsf~y~~~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~id 389 (567)
T COG1132 318 PPDP--------LKDTIGSIEFENVSFSYPGKKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILID 389 (567)
T ss_pred CCCC--------CCCCCCeEEEEEEEEEcCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEEC
Confidence 1110 11124679999999999877899999999999999999999999999999999999999999999999
Q ss_pred CCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---cCC
Q 000711 506 GVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWG 576 (1338)
Q Consensus 506 ~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g 576 (1338)
|.+ .++|++|+||||+|++|++||+|||.|+.+. .++++++++++.+++++++.++|.+.++ +.|
T Consensus 390 g~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~------at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G 463 (567)
T COG1132 390 GIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPD------ATDEEIEEALKLANAHEFIANLPDGYDTIVGERG 463 (567)
T ss_pred CEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCC------CCHHHHHHHHHHhChHHHHHhCcccccceecCCC
Confidence 976 3578999999999999999999999999753 6889999999999999999999876554 468
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 577 DELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 577 ~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
.+||||||||++||||++++|++++||||||+||+++|+.+++.+++ .++|+|+|+||+++++.||+|++|+++
T Consensus 464 ~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G 539 (567)
T COG1132 464 VNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNG 539 (567)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECC
Confidence 89999999999999999999999999999999999999999999864 478999999999999999999999974
No 37
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=4.9e-58 Score=579.11 Aligned_cols=526 Identities=19% Similarity=0.228 Sum_probs=397.3
Q ss_pred HHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 90 VLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYITG 169 (1338)
Q Consensus 90 ~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 169 (1338)
++++.++++++ .++..+++.++...+.+..+.+.+.+++......... .+....++.+++.++..+..|+..
T Consensus 4 ~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~ 75 (571)
T TIGR02203 4 RLWSYVRPYKA-----GLVLAGVAMILVAATESTLAALLKPLLDDGFGGRDRS---VLWWVPLVVIGLAVLRGICSFVST 75 (571)
T ss_pred HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchh---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555443 2556666777777788888888888888766543222 122222222333344556677777
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhchh
Q 000711 170 TLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASP 248 (1338)
Q Consensus 170 ~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~ 248 (1338)
++..+....+...+++.++++....+.+++++. .++..+|+++|++.+.+.+...+..++..++..+.+.. ++++++|
T Consensus 76 ~~~~~~~~~~~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~ 154 (571)
T TIGR02203 76 YLLSWVSNKVVRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFI-VLLYYSW 154 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhH
Confidence 777777777999999999999999999888764 56899999999999888777776666665555444433 3445788
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHH
Q 000711 249 KYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVL 328 (1338)
Q Consensus 249 ~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~ 328 (1338)
.+++++++..++..++..++.++..+...+.++.++++.....+..++.++|+.+++|+.+.+++.+.+++..+...+..
T Consensus 155 ~l~~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (571)
T TIGR02203 155 QLTLIVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMT 234 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888777777777677778888888888888888888888999999999999999999999888887777666544443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 329 HDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSG 408 (1338)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~ 408 (1338)
+.......+..++.. +...+.+++.....+.| ..+.|... + +..++..++.++..+...+..+++...
T Consensus 235 ~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~g-----~lt~g~l~--a----~~~~~~~~~~pl~~l~~~~~~~~~~~~ 302 (571)
T TIGR02203 235 SAGSISSPITQLIAS-LALAVVLFIALFQAQAG-----SLTAGDFT--A----FITAMIALIRPLKSLTNVNAPMQRGLA 302 (571)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-----CCCHhHHH--H----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333322222211 11111111111111223 23555432 2 223455666788889999999999999
Q ss_pred HHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHH
Q 000711 409 YADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSL 487 (1338)
Q Consensus 409 ~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTL 487 (1338)
+.+|+.++++.+++.+.... . .....+.++++||+|+|++ ++++|+|+||++++||+++|+|+||||||||
T Consensus 303 ~~~ri~~~l~~~~~~~~~~~--~------~~~~~~~i~~~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTL 374 (571)
T TIGR02203 303 AAESLFTLLDSPPEKDTGTR--A------IERARGDVEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTL 374 (571)
T ss_pred HHHHHHHHHcCCCCCCCCCC--C------CCCCCCeEEEEEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHH
Confidence 99999999875443221100 0 0012356999999999975 4689999999999999999999999999999
Q ss_pred HHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCc
Q 000711 488 FRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE 561 (1338)
Q Consensus 488 l~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 561 (1338)
+++|+|+|+|++|+|.+||.+ .+++++++||||+|++|+||++|||.++.+. +.+++++.++++.++++
T Consensus 375 l~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~-----~~~~~~i~~~l~~~~l~ 449 (571)
T TIGR02203 375 VNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTE-----QADRAEIERALAAAYAQ 449 (571)
T ss_pred HHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCC-----CCCHHHHHHHHHHcChH
Confidence 999999999999999999975 3467789999999999999999999998531 25788999999999999
Q ss_pred hHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChh
Q 000711 562 YLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPA 636 (1338)
Q Consensus 562 ~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~ 636 (1338)
++++++|.+.++ ++|.+||||||||++||||++++|++++||||||+||+++++.+++.+++ .++|+|+||||++
T Consensus 450 ~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~ 529 (571)
T TIGR02203 450 DFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLS 529 (571)
T ss_pred HHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhH
Confidence 999999876544 57889999999999999999999999999999999999999999998876 4899999999999
Q ss_pred hHhhcceEEEccC
Q 000711 637 LVAFHDVVLSLDG 649 (1338)
Q Consensus 637 ~~~~~d~i~~l~~ 649 (1338)
.++.||+|+++++
T Consensus 530 ~~~~~D~ii~l~~ 542 (571)
T TIGR02203 530 TIEKADRIVVMDD 542 (571)
T ss_pred HHHhCCEEEEEeC
Confidence 9999999999986
No 38
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.9e-58 Score=578.54 Aligned_cols=530 Identities=17% Similarity=0.173 Sum_probs=385.3
Q ss_pred ChHHHHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhc-ChhHHHHHHHHHHHHHHHHHHHHH
Q 000711 84 GLKSLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLR-RVPLFFQLISENILLCFLLSTMHS 162 (1338)
Q Consensus 84 ~~~~l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 162 (1338)
-|+.+++++.+..++++ . ++..+++.++.+.+.+..|.+.+.++|.+... +.+. ..++.++++.++..++..
T Consensus 7 ~~~~~~~l~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 79 (592)
T PRK10790 7 LWPTLKRLLAYGSPWRK----P-LGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPL--GLVAGLAAAYVGLQLLAA 79 (592)
T ss_pred hHHHHHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcch--hHHHHHHHHHHHHHHHHH
Confidence 34455666666666544 2 55566667777888888999999999987642 2221 111112222222333455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 000711 163 TSKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWR 241 (1338)
Q Consensus 163 ~~~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~ 241 (1338)
+..|+..++..+....+..+++.+++++....|.+++++. .++..+|+++|++.+.+.+...+..++..++..+.+. .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~-~ 158 (592)
T PRK10790 80 GLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAML-V 158 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 6677777777777777899999999999999999998765 6689999999999988877776666655554333332 2
Q ss_pred HHHhchhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHH
Q 000711 242 LCSYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALT 321 (1338)
Q Consensus 242 l~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~ 321 (1338)
++++++|.+++++++.+++..++..+..+...+...+.++..++......+...+.++||.|+.|+.+.+++.+..++..
T Consensus 159 ~~~~~~~~l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~ 238 (592)
T PRK10790 159 AMFSLDWRMALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHY 238 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 34456787777666555544444444555555555555566666777777888899999999999999877776665544
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 322 RHMRVVLHDH-WWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISS 400 (1338)
Q Consensus 322 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 400 (1338)
+...+..+.. .....+..++.... .++++++ .|....+..+.|.. ++ +..+...+..++..+...+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~g~is~g~l--~a----~~~~~~~~~~pl~~l~~~~ 305 (592)
T PRK10790 239 MARMQTLRLDGFLLRPLLSLFSALI--LCGLLML-----FGFSASGTIEVGVL--YA----FISYLGRLNEPLIELTTQQ 305 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH-----HHHHHCCCcCHHHH--HH----HHHHHHHHHHHHHHHHHHH
Confidence 4322221111 11111111111111 0111111 11111223355432 22 2234455667888888889
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCC
Q 000711 401 RRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPN 480 (1338)
Q Consensus 401 ~~l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~s 480 (1338)
..+++...+.+|+.++++.+++... .. . .....+.++|+||+|.||+++++|+|+||++++||+++|+|+|
T Consensus 306 ~~~~~~~~s~~ri~~~l~~~~~~~~-~~--~------~~~~~~~i~~~~v~f~y~~~~~il~~i~l~i~~Ge~iaIvG~S 376 (592)
T PRK10790 306 SMLQQAVVAGERVFELMDGPRQQYG-ND--D------RPLQSGRIDIDNVSFAYRDDNLVLQNINLSVPSRGFVALVGHT 376 (592)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccCC-CC--c------cCCCCCeEEEEEEEEEeCCCCceeeceeEEEcCCCEEEEECCC
Confidence 9999999999999999875432110 00 0 0112356999999999987678999999999999999999999
Q ss_pred CCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHH
Q 000711 481 GSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVEL 554 (1338)
Q Consensus 481 GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~ 554 (1338)
|||||||+++|+|+|+|++|+|.+||.+ ..++++|+||||+|++|++|++|||.++. +.+++++.++
T Consensus 377 GsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-------~~~d~~i~~a 449 (592)
T PRK10790 377 GSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-------DISEEQVWQA 449 (592)
T ss_pred CCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-------CCCHHHHHHH
Confidence 9999999999999999999999999975 34678999999999999999999999974 1478899999
Q ss_pred HHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEE
Q 000711 555 LKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCI 629 (1338)
Q Consensus 555 l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i 629 (1338)
++.+|++++++++|.+.++ +.|.+||||||||++|||||+++|++++||||||+||+++++.+++.+++ .++|+|
T Consensus 450 ~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvI 529 (592)
T PRK10790 450 LETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLV 529 (592)
T ss_pred HHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEE
Confidence 9999999999999976554 46889999999999999999999999999999999999999999999876 479999
Q ss_pred EEecChhhHhhcceEEEccCC
Q 000711 630 TISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 630 ~itH~~~~~~~~d~i~~l~~~ 650 (1338)
+||||++.++.+|+|++|+++
T Consensus 530 ivtHr~~~l~~~D~ii~l~~G 550 (592)
T PRK10790 530 VIAHRLSTIVEADTILVLHRG 550 (592)
T ss_pred EEecchHHHHhCCEEEEEECC
Confidence 999999999999999999863
No 39
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-60 Score=599.34 Aligned_cols=200 Identities=23% Similarity=0.303 Sum_probs=164.5
Q ss_pred CCcEEEEeEEEEcCC---CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC----------
Q 000711 442 ANYIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---------- 508 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~---~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~---------- 508 (1338)
...|+++|+++.|++ +.++++|+||++++||+++|+||||||||||+|+|+|+++|++|+|.++|.+
T Consensus 10 ~~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~ 89 (623)
T PRK10261 10 RDVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIE 89 (623)
T ss_pred CceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccc
Confidence 347999999999863 2479999999999999999999999999999999999999999999987731
Q ss_pred ------c---cc-cccEEEEecCC--CCC-CCCHHHHhcCCCCCC-cccCCCCHHHHHHHHHHcCCc---hHHhcCCCCc
Q 000711 509 ------S---DL-NKEIFYVPQRP--YTA-VGTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLE---YLLDRYPPEK 571 (1338)
Q Consensus 509 ------~---~~-~~~i~~v~Q~~--~l~-~~tl~eni~~~~~~~-~~~~~~~~~~~~~~l~~~~l~---~~~~~~~~~~ 571 (1338)
. .+ +++|+||+|+| .++ ..|++||+.++.... ........+++.++++.+|+. +..++.+
T Consensus 90 ~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~--- 166 (623)
T PRK10261 90 LSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQTILSRYP--- 166 (623)
T ss_pred cccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChhhHHhCCC---
Confidence 0 11 24799999998 454 469999998753210 000111235678899999995 3456655
Q ss_pred cccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEE
Q 000711 572 EINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLS 646 (1338)
Q Consensus 572 ~~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~ 646 (1338)
.+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+ ..||+|++
T Consensus 167 -----~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~v 241 (623)
T PRK10261 167 -----HQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLV 241 (623)
T ss_pred -----ccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEE
Confidence 68999999999999999999999999999999999999998887754 389999999999987 57999999
Q ss_pred ccC
Q 000711 647 LDG 649 (1338)
Q Consensus 647 l~~ 649 (1338)
|++
T Consensus 242 l~~ 244 (623)
T PRK10261 242 MYQ 244 (623)
T ss_pred eeC
Confidence 986
No 40
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=6.1e-59 Score=584.67 Aligned_cols=445 Identities=23% Similarity=0.267 Sum_probs=297.1
Q ss_pred HHHHHHHHHHHHHHHccc-ccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhh-------HhHHHHHHHHHHHHH
Q 000711 827 LGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMV-------KPSVDILWFTWRMKA 898 (1338)
Q Consensus 827 ~~~r~~l~~~l~~~~l~~-~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i-------~~~~~i~~~~~~l~~ 898 (1338)
.+....++.++++..++- ..||+..+ .++..+|+++|++.+...+......+. ..++.+++.+|++++
T Consensus 81 ~~~~~~lr~~~~~~l~~~~~~~~~~~~----~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 156 (567)
T COG1132 81 QKIVADLRRDLFEKLLRLPLSFFDKAK----SGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLAL 156 (567)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHhCcCC----cchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 333444444444444443 36666433 567899999999998877665422222 122233445676665
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHHHHHHHHHHHHHHHHH
Q 000711 899 LTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHS 978 (1338)
Q Consensus 899 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e~~~~~~~~~~~~~~~ 978 (1338)
+... +.+++.+...++.. +........++..+.......+...+.+.++.|+.+..+.+.++....+..+..
T Consensus 157 ~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~ 228 (567)
T COG1132 157 ILLL-----ILPLLALVLSLLAR---KSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRAN 228 (567)
T ss_pred HHHH-----HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 4311 11111111111111 111222222222233333334444567788999887776555555554444433
Q ss_pred HHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 979 LLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVE 1058 (1338)
Q Consensus 979 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1338)
...............++. .+.....++++........ .+.|.+...+. +......++..+......+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~----~~~~~~~~~~~l~~~~~~~~~ 297 (567)
T COG1132 229 LRASRLEALLAPLMLLLS-----SLGTVLVLALGGFLVLSGS--LTVGALAAFIL----YLLRLLTPILQLGEVVSLLQR 297 (567)
T ss_pred HHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHcCC--CCHhHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 222222222211111111 1111222222211100000 12344333332 334455677778888888888
Q ss_pred HHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCc
Q 000711 1059 LSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSG 1138 (1338)
Q Consensus 1059 ~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsG 1138 (1338)
...+.+|++++.+.+++..++.. . .....|+|+|+||+|+||+++++|+|+||+|+|||++|||||||||
T Consensus 298 ~~~a~~ri~~~l~~~~~~~~~~~-------~---~~~~~~~I~f~~vsf~y~~~~~vl~~is~~i~~Ge~vaiVG~sGsG 367 (567)
T COG1132 298 ASAAAERLFELLDEEPEVEDPPD-------P---LKDTIGSIEFENVSFSYPGKKPVLKDISFSIEPGEKVAIVGPSGSG 367 (567)
T ss_pred HHHHHHHHHHHHcCCccccCCCC-------C---CCCCCCeEEEEEEEEEcCCCCccccCceEEEcCCCEEEEECCCCCC
Confidence 88999999999865332211100 0 1112578999999999998889999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCc--hHHHHHHHHhhhcCCcc
Q 000711 1139 KSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLS--REEAELRALKLHGKGEK 1214 (1338)
Q Consensus 1139 KSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~--~~~~~~~a~~~a~~~~~ 1214 (1338)
|||++++|+|||||++|+|.+||+||+++ +.+|++|++|||||+||+|||||||.|+.+ ++|++++||+.++
T Consensus 368 KSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~---- 443 (567)
T COG1132 368 KSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLAN---- 443 (567)
T ss_pred HHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhC----
Confidence 99999999999999999999999999998 567889999999999999999999998643 4555556655554
Q ss_pred ccccccCchHHHHHHHhhCCchhhhhhhcccCcccCc-ccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHH
Q 000711 1215 LVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQ 1293 (1338)
Q Consensus 1215 ~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~-~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~ 1293 (1338)
++++++++|+||||.++ .|.+||||||||||||||++|+|||||||||||+||.++|+.
T Consensus 444 --------------------~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~ 503 (567)
T COG1132 444 --------------------AHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEAL 503 (567)
T ss_pred --------------------hHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHH
Confidence 44556667889999985 789999999999999999999999999999999999999999
Q ss_pred HHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1294 LYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1294 i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
+++.++. .++|+|+||||+++++.+|+++++++|+
T Consensus 504 I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~ 540 (567)
T COG1132 504 IQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGR 540 (567)
T ss_pred HHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCE
Confidence 9988753 5889999999999999999999998775
No 41
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.3e-60 Score=591.57 Aligned_cols=198 Identities=26% Similarity=0.378 Sum_probs=163.0
Q ss_pred cEEEEeEEEEcCC---CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCCc-c----
Q 000711 444 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-D---- 510 (1338)
Q Consensus 444 ~i~~~~v~~~~~~---~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~-~---- 510 (1338)
.++++|+++.|++ ++++|+|+||++++||+++|+||||||||||+|+|+|+++| ++|+|.++|.+. .
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 6899999999964 25899999999999999999999999999999999999987 799999998641 1
Q ss_pred ----cc-ccEEEEecCCC--CC-CCCHHHHhcCCCCC-CcccCCCCHHHHHHHHHHcCCch---HHhcCCCCccccCCCC
Q 000711 511 ----LN-KEIFYVPQRPY--TA-VGTLRDQLIYPLTS-DQEVEPLTHGGMVELLKNVDLEY---LLDRYPPEKEINWGDE 578 (1338)
Q Consensus 511 ----~~-~~i~~v~Q~~~--l~-~~tl~eni~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~~~~~~g~~ 578 (1338)
.+ ++++|+||+|. ++ ..|+++|+.++... .........+++.++++.+++.+ ..++.+ .+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~--------~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYP--------HQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhhCC--------cc
Confidence 12 47999999984 33 35899998643210 00001112456788999999975 345555 68
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 579 LSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 579 LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
||||||||++|||||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .||+|++|++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~ 232 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQN 232 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEEC
Confidence 999999999999999999999999999999999999999988764 3899999999999775 7999999986
No 42
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=3.6e-60 Score=585.95 Aligned_cols=197 Identities=25% Similarity=0.356 Sum_probs=166.5
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------c-ccccEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~-~~~~i~ 516 (1338)
.|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. . .++.++
T Consensus 4 ~i~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 82 (501)
T PRK10762 4 LLQLKGIDKAFP-GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGIG 82 (501)
T ss_pred eEEEeeeEEEeC-CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCEE
Confidence 589999999995 46899999999999999999999999999999999999999999999998541 1 235799
Q ss_pred EEecCCCCCC-CCHHHHhcCCCCCCcc---c-CCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHH
Q 000711 517 YVPQRPYTAV-GTLRDQLIYPLTSDQE---V-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 591 (1338)
Q Consensus 517 ~v~Q~~~l~~-~tl~eni~~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalAR 591 (1338)
|+||++.++. .|++||+.++...... . .....+++.++++.+++.+..++.+ .+||||||||++|||
T Consensus 83 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~la~ 154 (501)
T PRK10762 83 IIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV--------GELSIGEQQMVEIAK 154 (501)
T ss_pred EEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch--------hhCCHHHHHHHHHHH
Confidence 9999987765 5999999986432100 0 0011345778899999987766655 689999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 592 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 592 al~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
||+.+|+++||||||++||+.+...+++.+++ .|+|+|++||+++.+ ..||++++|++
T Consensus 155 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 155 VLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRD 216 (501)
T ss_pred HHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 99999999999999999999999999887754 488999999999887 47999999986
No 43
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.5e-57 Score=568.31 Aligned_cols=510 Identities=18% Similarity=0.203 Sum_probs=377.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hc-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAF-LR-RVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIH 184 (1338)
Q Consensus 107 l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~R~~lt~~l~ 184 (1338)
++..+++.++.+.+++..|.+.+.++|.+. .. +...+ ..+++.++++.++..+..|+..++..+....+..+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 80 (529)
T TIGR02857 5 LALLGLLGALGALLIIAQAWLLARVIDGLISAGEPLAEL----LPALGALALAVLLRALLGWLGERAAARAAAAVKSQLR 80 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666778888888999999999999884 32 22222 2222223333344556677777777777777999999
Q ss_pred HHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHH
Q 000711 185 TRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGT 263 (1338)
Q Consensus 185 ~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~ 263 (1338)
.+.|++..+.+..++++. .++..+|+++|++.+.+.+...+..++..++..+.+.+ ++.+++|.+++++++.+++..+
T Consensus 81 ~~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 81 ERLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILA-AVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999999998764 67999999999999887776655555544443333322 2345678777776666555555
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 264 MMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLK 343 (1338)
Q Consensus 264 ~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (1338)
+..++.++..+...+.++..+++.....+..+++++||.|+.|+.+.+++.+..++..+...+..+.....+.+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566777777777777777777777888888999999999999999877776666555443333222222222222111
Q ss_pred HHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 000711 344 YLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISREL 423 (1338)
Q Consensus 344 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~~~~~~~ 423 (1338)
+...+.+++.....+.| ..+.|.. ++ +..+...++.++..+...+..+++...+.+|+.++++.+++.
T Consensus 240 -~~~~~~~~~~~~~~~~g-----~~t~g~~--~~----~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~ 307 (529)
T TIGR02857 240 -LSVALVAVYIGFRLLAG-----DLDLATG--LF----VLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPL 307 (529)
T ss_pred -HHHHHHHHHHHHHHHcC-----CCCHHHH--HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 11111001110011122 2355532 22 223344566678888888899999999999999998743221
Q ss_pred cccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEE
Q 000711 424 SIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHI 502 (1338)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i 502 (1338)
. +.. . ......+.|+++||+|.||++ +++|+|+||++++||+++|+||||||||||+|+|+|+|+|++|+|
T Consensus 308 ~--~~~---~---~~~~~~~~i~~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I 379 (529)
T TIGR02857 308 A--GKA---P---VTAAPAPSLEFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSI 379 (529)
T ss_pred C--CCc---C---CCCCCCCeEEEEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEE
Confidence 1 000 0 000113479999999999875 489999999999999999999999999999999999999999999
Q ss_pred EeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---
Q 000711 503 AKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI--- 573 (1338)
Q Consensus 503 ~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~--- 573 (1338)
.+||.+ .+++++++||||+|++|++|++|||.++.+. .+++++.++++.++++++++++|.+.++
T Consensus 380 ~~~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~------~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~ 453 (529)
T TIGR02857 380 AVNGVPLADADADSWRDQIAWVPQHPFLFAGTIAENIRLARPD------ASDAEIRRALERAGLDEFVAALPQGLDTLIG 453 (529)
T ss_pred EECCEehhhCCHHHHHhheEEEcCCCcccCcCHHHHHhccCCC------CCHHHHHHHHHHcCcHHHHHhCcccccchhc
Confidence 999975 3467889999999999999999999997532 4678999999999999999999976554
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhhcceEEEc
Q 000711 574 NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSL 647 (1338)
Q Consensus 574 ~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i~~l 647 (1338)
++|.+||||||||++||||++++|++++||||||+||+++++.+++.+++ .++|+|+||||+++++.||+|++|
T Consensus 454 e~g~~LSgGq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 454 EGGAGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 47889999999999999999999999999999999999999999999876 489999999999999999999975
No 44
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=5.2e-60 Score=587.67 Aligned_cols=196 Identities=26% Similarity=0.320 Sum_probs=162.1
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCC--CCCccEEEeCC----------------
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW--PLVSGHIAKPG---------------- 506 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~--~~~~G~i~~~~---------------- 506 (1338)
|+++|+++.|+ ++++|+|+||++++||+++|+||||||||||+|+|+|+. +|++|+|.+++
T Consensus 1 l~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~g 79 (520)
T TIGR03269 1 IEVKNLTKKFD-GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKVG 79 (520)
T ss_pred CEEEEEEEEEC-CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccccc
Confidence 47899999995 468999999999999999999999999999999999997 79999999862
Q ss_pred -------CC----------------ccccccEEEEecC-CCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCc
Q 000711 507 -------VG----------------SDLNKEIFYVPQR-PYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE 561 (1338)
Q Consensus 507 -------~~----------------~~~~~~i~~v~Q~-~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 561 (1338)
.+ ..+++.++|+||+ +.++. .|++||+.++...........++++.++++.++++
T Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 159 (520)
T TIGR03269 80 EPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQLS 159 (520)
T ss_pred cccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh
Confidence 10 0124569999998 45554 59999998753211100111235678899999998
Q ss_pred hHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhh
Q 000711 562 YLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPAL 637 (1338)
Q Consensus 562 ~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~ 637 (1338)
+..++.+ .+||||||||++|||||+.+|+++||||||++||+.+.+++.+.+++ .|+|+|+|||+++.
T Consensus 160 ~~~~~~~--------~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~ 231 (520)
T TIGR03269 160 HRITHIA--------RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEV 231 (520)
T ss_pred hhhhcCc--------ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHH
Confidence 8887766 68999999999999999999999999999999999999998877653 48999999999998
Q ss_pred Hh-hcceEEEccC
Q 000711 638 VA-FHDVVLSLDG 649 (1338)
Q Consensus 638 ~~-~~d~i~~l~~ 649 (1338)
+. .||++++|++
T Consensus 232 ~~~~~d~i~~l~~ 244 (520)
T TIGR03269 232 IEDLSDKAIWLEN 244 (520)
T ss_pred HHHhcCEEEEEeC
Confidence 75 7999999975
No 45
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.3e-57 Score=575.19 Aligned_cols=529 Identities=17% Similarity=0.161 Sum_probs=379.2
Q ss_pred HHHHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 86 KSLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSK 165 (1338)
Q Consensus 86 ~~l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1338)
+.++++++++++++. .+.+.+++.++...+++..|.+.+.++|.+..+. .+...++.++ +..++..+..
T Consensus 5 ~~~~~l~~~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~--~~~~~~~~~~----~~~~~~~~~~ 73 (588)
T PRK13657 5 RLYARVLQYLGAEKR-----LGILLAVANVLLAAATFAEPILFGRIIDAISGKG--DIFPLLAAWA----GFGLFNIIAG 73 (588)
T ss_pred HHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--cHHHHHHHHH----HHHHHHHHHH
Confidence 445666666655443 2566677778888888999999999999887542 2222111111 1122223334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000711 166 YITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCS 244 (1338)
Q Consensus 166 ~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 244 (1338)
|+..++..+....+..+++.+++++....|.+++++. .++..+|+++|++.+.+.....+...+..++..++. ..+++
T Consensus 74 ~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 152 (588)
T PRK13657 74 VLVARHADRLAHRRRLAVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVL-LPLAL 152 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 4444444444344555566788888888899888754 668999999999988776666666655554443322 23344
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 000711 245 YASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHM 324 (1338)
Q Consensus 245 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~ 324 (1338)
+++|.+++++++.+++..++..++.++..+...+.++..+++.....+..++++.||.|+.|+.+.+++.+.+++..+..
T Consensus 153 ~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~ 232 (588)
T PRK13657 153 FMNWRLSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQ 232 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 56787777766666655555666677777776667777777777787888899999999999999988887777766654
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 325 RVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLN 404 (1338)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~ 404 (1338)
.+..+.......+..+.. .+.....+++....++.|. .+.|.. ++ +..++..++.++..+...+..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~v~~g~-----lt~g~~--~a----~~~l~~~~~~~l~~l~~~~~~~~ 300 (588)
T PRK13657 233 MPVLSWWALASVLNRAAS-TITMLAILVLGAALVQKGQ-----LRVGEV--VA----FVGFATLLIGRLDQVVAFINQVF 300 (588)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCC-----cCHHHH--HH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 433332222222222111 1111111111111112233 355543 22 12334455667778888888888
Q ss_pred HHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcH
Q 000711 405 RLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGK 484 (1338)
Q Consensus 405 ~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGK 484 (1338)
....+.+|+.++++.+++.+.... . .......+.|+++||+|.||+++++|+|+||++++||+++|+|+|||||
T Consensus 301 ~~~~~~~~i~~l~~~~~~~~~~~~-----~-~~~~~~~~~I~~~~vsf~y~~~~~iL~~inl~i~~G~~v~IvG~sGsGK 374 (588)
T PRK13657 301 MAAPKLEEFFEVEDAVPDVRDPPG-----A-IDLGRVKGAVEFDDVSFSYDNSRQGVEDVSFEAKPGQTVAIVGPTGAGK 374 (588)
T ss_pred HHHHHHHHHHHHhCCCcccCCCCC-----C-CCcCCCCCeEEEEEEEEEeCCCCceecceeEEECCCCEEEEECCCCCCH
Confidence 888999999988765433211000 0 0000113469999999999866789999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHc
Q 000711 485 SSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNV 558 (1338)
Q Consensus 485 STLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~ 558 (1338)
|||+++|+|+|+|++|+|.+||.+ .+++++|+||||+|++|++|++|||.++.+. .+++++.++++.+
T Consensus 375 STLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~------~~d~~i~~al~~~ 448 (588)
T PRK13657 375 STLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPD------ATDEEMRAAAERA 448 (588)
T ss_pred HHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCC------CCHHHHHHHHHHh
Confidence 999999999999999999999975 3467899999999999999999999997532 4688999999999
Q ss_pred CCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEec
Q 000711 559 DLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISH 633 (1338)
Q Consensus 559 ~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH 633 (1338)
+++++++++|.+.++ ++|.+||||||||++|||||+++|++++||||||+||+++++.+++.+++ .++|+|+|||
T Consensus 449 ~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitH 528 (588)
T PRK13657 449 QAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAH 528 (588)
T ss_pred CHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEe
Confidence 999999999876554 46889999999999999999999999999999999999999999998875 4799999999
Q ss_pred ChhhHhhcceEEEccCC
Q 000711 634 RPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 634 ~~~~~~~~d~i~~l~~~ 650 (1338)
|++.++.+|+|++|+++
T Consensus 529 r~~~~~~~D~ii~l~~G 545 (588)
T PRK13657 529 RLSTVRNADRILVFDNG 545 (588)
T ss_pred cHHHHHhCCEEEEEECC
Confidence 99999999999999863
No 46
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=2.4e-58 Score=575.40 Aligned_cols=451 Identities=18% Similarity=0.130 Sum_probs=298.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHhH----
Q 000711 812 SFIAPSIRHLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPS---- 886 (1338)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~-~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~~---- 886 (1338)
.+..+...++..+...++..++..+++++.++. ..||+. ...++..+|+++|++.+...+...+..++..+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~----~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~ 142 (529)
T TIGR02868 67 AVFRYLERLVGHDAALRSLGRLRVRVYDRLARLALAGRRR----FQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGS 142 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccccc----CChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444555555566666666666664 356653 23467889999999999877665444333222
Q ss_pred ---HHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHH
Q 000711 887 ---VDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGARE 963 (1338)
Q Consensus 887 ---~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e 963 (1338)
+.+++++|.++++.. +.+.+++++...+.... ......+.++..+.+.....+...+.++|+.|+.++.+
T Consensus 143 ~~~~~l~~~~~~l~l~~l----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~ 215 (529)
T TIGR02868 143 AAVAAIALLSVPAALVLA----AGLLLAGFVAPLVSLRA---ARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPA 215 (529)
T ss_pred HHHHHHHHHhHHHHHHHH----HHHHHHHHHHHHHHHHh---cchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHH
Confidence 223455666654421 11111111111111111 11222233333344444555566678999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHHHHHHHHHHH
Q 000711 964 KAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSF 1043 (1338)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~~~ 1043 (1338)
.+.+++..++..+...+..+...+......++. .+...+.++++........ .+.|.+...+. +.....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~g~--~t~g~l~~~~~----~~~~~~ 284 (529)
T TIGR02868 216 LAQVEAADRELLAAERRAARATGLGAAAQLLAA-----GLAVLGALWAGGPAVADGT--LAPATLAVLVL----LPLAAF 284 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhCCC--CChhHHHHHHH----HHHHHH
Confidence 777766665555544333322222221111111 1111112222211100000 12333333322 223444
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCCccccccccceEE
Q 000711 1044 LAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEI 1123 (1338)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~~~~vL~~lsf~I 1123 (1338)
.++..+......+.+...+.+|+.++.+.+++.++.. ...+...++ ..+.|+|+||+|.||+++++|+|+||+|
T Consensus 285 ~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~---~~~~~~~~~---~~~~I~~~~vsf~Y~~~~~vL~~isl~i 358 (529)
T TIGR02868 285 EAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGV---VPAAGALGL---GKPTLELRDLSFGYPGSPPVLDGVSLDL 358 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCC---CCCCcccCC---CCceEEEEEEEEecCCCCceeecceEEE
Confidence 5666777777788888899999999876543221110 000011122 2467999999999988778999999999
Q ss_pred eCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc-cCCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHH
Q 000711 1124 VPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAE 1202 (1338)
Q Consensus 1124 ~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~-~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~ 1202 (1338)
+|||++|||||||||||||+++|+|+|+|++|+|.+||+|++++ ..+|++|+||||||+||+|||||||.++.+
T Consensus 359 ~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~----- 433 (529)
T TIGR02868 359 PPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSLQDELRRRISVFAQDAHLFDTTVRDNLRLGRP----- 433 (529)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhHHHHHHhheEEEccCcccccccHHHHHhccCC-----
Confidence 99999999999999999999999999999999999999999987 445778999999999999999999998532
Q ss_pred HHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEEeec
Q 000711 1203 LRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDE 1281 (1338)
Q Consensus 1203 ~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDE 1281 (1338)
+..|++++++++.++++++++++|+||||.+ ++|.+||||||||||||||++++|+||||||
T Consensus 434 -----------------~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~iliLDE 496 (529)
T TIGR02868 434 -----------------DATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPILLLDE 496 (529)
T ss_pred -----------------CCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 1234556677777788888888999999998 5789999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHh--cCCeEEEeccCC
Q 000711 1282 CTNATSVDVEEQLYRLAKD--MGITFVTSSQRP 1312 (1338)
Q Consensus 1282 ATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl 1312 (1338)
||||||.++|+.+++.+++ .++|+|+||||+
T Consensus 497 ~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 497 PTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999887754 589999999996
No 47
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-60 Score=583.09 Aligned_cols=197 Identities=22% Similarity=0.321 Sum_probs=166.6
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-------cccccEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~ 516 (1338)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. .++++++
T Consensus 4 ~l~~~~l~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i~ 82 (501)
T PRK11288 4 YLSFDGIGKTFP-GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGVA 82 (501)
T ss_pred eEEEeeeEEEEC-CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCEE
Confidence 589999999996 46799999999999999999999999999999999999999999999998541 1346799
Q ss_pred EEecCCCCCC-CCHHHHhcCCCCCC--ccc-CCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000711 517 YVPQRPYTAV-GTLRDQLIYPLTSD--QEV-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1338)
Q Consensus 517 ~v~Q~~~l~~-~tl~eni~~~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1338)
|+||++.++. .|++||+.++.... ... .....+++.++++.+++.+..++.+ .+||||||||++||||
T Consensus 83 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgGq~qrv~lara 154 (501)
T PRK11288 83 IIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL--------KYLSIGQRQMVEIAKA 154 (501)
T ss_pred EEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch--------hhCCHHHHHHHHHHHH
Confidence 9999998776 49999999864211 000 0112346778899999876655544 6899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 593 l~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .||++++|++
T Consensus 155 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 155 LARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKD 215 (501)
T ss_pred HHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999988764 4899999999999874 6999999986
No 48
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.6e-59 Score=580.92 Aligned_cols=196 Identities=23% Similarity=0.334 Sum_probs=162.7
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC--CccEEEeCCCCc-c------ccccE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL--VSGHIAKPGVGS-D------LNKEI 515 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~--~~G~i~~~~~~~-~------~~~~i 515 (1338)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|.+. . .++.+
T Consensus 2 l~i~~l~~~~~-~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (500)
T TIGR02633 2 LEMKGIVKTFG-GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGI 80 (500)
T ss_pred EEEEeEEEEeC-CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCE
Confidence 68999999995 46799999999999999999999999999999999999987 799999998641 1 23579
Q ss_pred EEEecCCCCCC-CCHHHHhcCCCCCCc---cc-CCCCHHHHHHHHHHcCCchHH-hcCCCCccccCCCCCChhHHHHHHH
Q 000711 516 FYVPQRPYTAV-GTLRDQLIYPLTSDQ---EV-EPLTHGGMVELLKNVDLEYLL-DRYPPEKEINWGDELSLGEQQRLGM 589 (1338)
Q Consensus 516 ~~v~Q~~~l~~-~tl~eni~~~~~~~~---~~-~~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~~g~~LSgGqkQRlal 589 (1338)
+||||+|.++. .|++||+.++..... .. .....+++.++++.+++.+.. ++.+ .+||||||||++|
T Consensus 81 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LSgG~~qrv~i 152 (500)
T TIGR02633 81 VIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPV--------GDYGGGQQQLVEI 152 (500)
T ss_pred EEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCch--------hhCCHHHHHHHHH
Confidence 99999987765 599999988643110 00 011234577888999887543 2323 5899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 590 ARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
||||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .||++++|++
T Consensus 153 A~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~ 216 (500)
T TIGR02633 153 AKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRD 216 (500)
T ss_pred HHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999888754 5899999999999875 6999999976
No 49
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.3e-57 Score=581.07 Aligned_cols=526 Identities=16% Similarity=0.184 Sum_probs=395.9
Q ss_pred HHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh-cChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 88 LQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFL-RRVPLFFQLISENILLCFLLSTMHSTSKY 166 (1338)
Q Consensus 88 l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (1338)
+.++++.++++++. +...++++++.+.+++..|...+.++|.+.. ++...+.. .++.++++.++..+..|
T Consensus 127 ~~~~~~~~~~~~~~-----~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~----l~~~~~~~~~~~~~~~~ 197 (694)
T TIGR01846 127 FSWFIPAIIRYRKQ-----FREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSV----LALAMLAVAIFEPALGG 197 (694)
T ss_pred HHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHH----HHHHHHHHHHHHHHHHH
Confidence 45566666665542 5556666777778888999999999998763 33333222 22222233334556677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 000711 167 ITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSY 245 (1338)
Q Consensus 167 l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~ 245 (1338)
++.++..+...++..+++.++|+++...|+++++++ .++..+|+ +|++.+.+.+...+...+..++..+++.. ++++
T Consensus 198 l~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~-~l~~ 275 (694)
T TIGR01846 198 LRTYLFAHLTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLA-VMFF 275 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 777777777777999999999999999999999765 67889998 79998887766555554444443333433 3456
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 000711 246 ASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMR 325 (1338)
Q Consensus 246 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~ 325 (1338)
++|.+++++++.+++..++..++.+++.+...+.++..+++.....+...++++||.++.|+.+.+++.+.+++..+...
T Consensus 276 ~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 355 (694)
T TIGR01846 276 YSPTLTGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASF 355 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHH
Confidence 78888888777776666666677888877777777777788888888888999999999999999988888877766544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccc-CCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 326 VVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLN 404 (1338)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~ 404 (1338)
+..+.......+..++. ......+++ +++.+. .+..+.|.. ++ +..+...++.++..+...+..++
T Consensus 356 ~~~~~~~~~~~~~~~i~---~~~~~~il~----~g~~lv~~g~it~G~l--ia----~~~l~~~~~~pl~~l~~~~~~~~ 422 (694)
T TIGR01846 356 RVTNLGNIAGQAIELIQ---KLTFAILLW----FGAHLVIGGALSPGQL--VA----FNMLAGRVTQPVLRLAQLWQDFQ 422 (694)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHhHH----HHHHHHHcCCCCHHHH--HH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 43333322222222211 111111111 111111 223356643 22 22344566678888999999999
Q ss_pred HHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCc
Q 000711 405 RLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSG 483 (1338)
Q Consensus 405 ~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~~sl~i~~G~~~~i~G~sGsG 483 (1338)
+...+.+|+.++++.+++.+... . .......+.|+++||+|.|++ ++++|+|+||++++||+++|+||||||
T Consensus 423 ~~~~~~~ri~~~l~~~~e~~~~~-~------~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsG 495 (694)
T TIGR01846 423 QTGIALERLGDILNSPTEPRSAG-L------AALPELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSG 495 (694)
T ss_pred HHHHHHHHHHHHHcCCCCccCCC-C------CCCCCCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCC
Confidence 99999999999987654422100 0 000112457999999999975 467999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHH
Q 000711 484 KSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKN 557 (1338)
Q Consensus 484 KSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~ 557 (1338)
||||+++|+|+++|++|+|.+||.+ .+++++++||||+|++|++|++|||.++.+ ..+++++.++++.
T Consensus 496 KSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~------~~~~~~i~~a~~~ 569 (694)
T TIGR01846 496 KSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNP------GAPFEHVIHAAKL 569 (694)
T ss_pred HHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCC------CCCHHHHHHHHHH
Confidence 9999999999999999999999975 246788999999999999999999998753 2578899999999
Q ss_pred cCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEe
Q 000711 558 VDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITIS 632 (1338)
Q Consensus 558 ~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~it 632 (1338)
++++++++++|.+.++ +.|.+||||||||++||||++++|+++|||||||+||+++++.+++.+++ .++|+|+||
T Consensus 570 ~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~it 649 (694)
T TIGR01846 570 AGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIA 649 (694)
T ss_pred cChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 9999999999876554 46889999999999999999999999999999999999999999999876 489999999
Q ss_pred cChhhHhhcceEEEccCC
Q 000711 633 HRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 633 H~~~~~~~~d~i~~l~~~ 650 (1338)
||++.++.+|+|++|+++
T Consensus 650 H~~~~~~~~d~ii~l~~G 667 (694)
T TIGR01846 650 HRLSTVRACDRIIVLEKG 667 (694)
T ss_pred CChHHHHhCCEEEEEeCC
Confidence 999999999999999873
No 50
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-58 Score=574.74 Aligned_cols=191 Identities=21% Similarity=0.258 Sum_probs=162.0
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCccccccEEEEecCCCC
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYT 524 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~l 524 (1338)
|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|. ..++|+||++.+
T Consensus 2 l~i~~ls~~~~-~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-----~~i~~~~q~~~~ 75 (530)
T PRK15064 2 LSTANITMQFG-AKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-----ERLGKLRQDQFA 75 (530)
T ss_pred EEEEEEEEEeC-CcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----CEEEEEeccCCc
Confidence 78999999995 468999999999999999999999999999999999999999999999873 469999999877
Q ss_pred CC-CCHHHHhcCCCCC-------------Ccc---c----------------CCCCHHHHHHHHHHcCCchHHh-cCCCC
Q 000711 525 AV-GTLRDQLIYPLTS-------------DQE---V----------------EPLTHGGMVELLKNVDLEYLLD-RYPPE 570 (1338)
Q Consensus 525 ~~-~tl~eni~~~~~~-------------~~~---~----------------~~~~~~~~~~~l~~~~l~~~~~-~~~~~ 570 (1338)
+. .|++||+.++... ... . ....+.++.++++.+++.+... +.+
T Consensus 76 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-- 153 (530)
T PRK15064 76 FEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEEQHYGLM-- 153 (530)
T ss_pred CCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChhHhcCch--
Confidence 65 4999999875310 000 0 0011345677888888876443 333
Q ss_pred ccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHccCCeEEEEecChhhHh-hcceEEEccC
Q 000711 571 KEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 571 ~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
.+||||||||++|||||+.+|+++||||||++||+.+..++.+.+++.|.|+|+|||+++.+. .||++++|++
T Consensus 154 ------~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tiiivsHd~~~~~~~~d~i~~l~~ 227 (530)
T PRK15064 154 ------SEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCTHMADLDY 227 (530)
T ss_pred ------hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcceEEEEeC
Confidence 689999999999999999999999999999999999999999999888999999999999875 7999999986
No 51
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=9.1e-57 Score=564.16 Aligned_cols=526 Identities=16% Similarity=0.132 Sum_probs=388.8
Q ss_pred HHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 88 LQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYI 167 (1338)
Q Consensus 88 l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 167 (1338)
+++++++++|+++. ++..+++.++.+.+.+..|...+.++|.+..++. .... +++.++..++..+..|+
T Consensus 7 ~~~l~~~l~~~k~~-----~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~ 75 (585)
T TIGR01192 7 YVRALSYLNVHKNR-----VLLIVIANITLAAITIAEPILFGRIIDAISSKSD--VLPT----LALWAGFGVFNTIAYVL 75 (585)
T ss_pred HHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--HHHH----HHHHHHHHHHHHHHHHH
Confidence 56777888877662 5566777788888889999999999998775432 1111 11111223344556677
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Q 000711 168 TGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYA 246 (1338)
Q Consensus 168 ~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~ 246 (1338)
..++..+....+..+++.++|++....|+++++++ .++..+|+++|++.+.+.+...+...+..++..+.+.+ .++++
T Consensus 76 ~~~~~~~~~~~~~~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~-~l~~~ 154 (585)
T TIGR01192 76 VAREADRLAHGRRATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIP-TAFAM 154 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 77777776666777888899999999999999764 67999999999999887777766666555554433333 34467
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Q 000711 247 SPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRV 326 (1338)
Q Consensus 247 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~ 326 (1338)
+|.+++++++.+++..++..++.++..+...+.++..+++.....+..+++++||.|+.|+.+.+++++..++..+...+
T Consensus 155 ~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (585)
T TIGR01192 155 DWRLSIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYP 234 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 88888887777666666666677777766666666777777777777789999999999999998887777665554433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccc-CCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 327 VLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNR 405 (1338)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~ 405 (1338)
..+.......+..++ .......+++ +++.+. .+..+.|.. ++. ..++..++.++..+...+..++.
T Consensus 235 ~~~~~~~~~~~~~~~---~~~~~~~v~~----~g~~~v~~g~it~g~l--~a~----~~~~~~l~~~~~~l~~~~~~~~~ 301 (585)
T TIGR01192 235 VLDWWALASGLNRMA---STISMMCILV----IGTVLVIKGELSVGEV--IAF----IGFANLLIGRLDQMSGFITQIFE 301 (585)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHH----HHHHHHHcCCCCHHHH--HHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 322222111111111 1111111111 111111 222355543 222 23344555677778888888899
Q ss_pred HHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHH
Q 000711 406 LSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKS 485 (1338)
Q Consensus 406 ~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKS 485 (1338)
...+.+|+.++++.+++.+..... . ......+.++++||+|.|++++++++|+||++++||+++|+||||||||
T Consensus 302 ~~~~~~ri~~~~~~~~~~~~~~~~-~-----~~~~~~~~i~~~~v~~~y~~~~~~l~~i~~~i~~G~~~~ivG~sGsGKS 375 (585)
T TIGR01192 302 ARAKLEDFFDLEDSVFQREEPADA-P-----ELPNVKGAVEFRHITFEFANSSQGVFDVSFEAKAGQTVAIVGPTGAGKT 375 (585)
T ss_pred HHHHHHHHHHHHcCCccccCCccC-C-----CCCCCCCeEEEEEEEEECCCCCccccceeEEEcCCCEEEEECCCCCCHH
Confidence 999999999988754332111000 0 0011134699999999998767899999999999999999999999999
Q ss_pred HHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcC
Q 000711 486 SLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVD 559 (1338)
Q Consensus 486 TLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~ 559 (1338)
||+++|+|+++|++|+|.++|.+ .++++.++||||+|++|++|++|||.++.+. .+++++.++++.++
T Consensus 376 TL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~------~~~~~~~~a~~~~~ 449 (585)
T TIGR01192 376 TLINLLQRVYDPTVGQILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREG------ATDEEVYEAAKAAA 449 (585)
T ss_pred HHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCC------CCHHHHHHHHHHhC
Confidence 99999999999999999999965 2456789999999999999999999997532 46788999999999
Q ss_pred CchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecC
Q 000711 560 LEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHR 634 (1338)
Q Consensus 560 l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~ 634 (1338)
+++++.++|.+.++ ++|.+||||||||++|||||+++|+++|||||||+||+++++.+++.+.+ .++|+|+||||
T Consensus 450 ~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~ 529 (585)
T TIGR01192 450 AHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHR 529 (585)
T ss_pred cHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcC
Confidence 99999988865443 56889999999999999999999999999999999999999999998875 48999999999
Q ss_pred hhhHhhcceEEEccCC
Q 000711 635 PALVAFHDVVLSLDGE 650 (1338)
Q Consensus 635 ~~~~~~~d~i~~l~~~ 650 (1338)
++.++.+|+|++|+++
T Consensus 530 ~~~~~~~d~i~~l~~G 545 (585)
T TIGR01192 530 LSTVRNADLVLFLDQG 545 (585)
T ss_pred hHHHHcCCEEEEEECC
Confidence 9999999999999873
No 52
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=8e-57 Score=568.32 Aligned_cols=530 Identities=20% Similarity=0.238 Sum_probs=387.5
Q ss_pred HHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 88 LQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAF-LRRVPLFFQLISENILLCFLLSTMHSTSKY 166 (1338)
Q Consensus 88 l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (1338)
++.++++++++++ . +.+.+++.++...+++..|...+.++|.+. +.+...+...+ ++.+++.++.....|
T Consensus 6 ~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 76 (576)
T TIGR02204 6 LAALWPFVRPYRG----R-VLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYF----AFLLVVALVLALGTA 76 (576)
T ss_pred HHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 4455666655433 2 555666777888888899999999999854 33333322211 112222223344455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 000711 167 ITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSY 245 (1338)
Q Consensus 167 l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~ 245 (1338)
+..++..+....+..+++...+++....+.+++++. .++..+|+++|++.+.+.+...+..++..++..+.+. .++++
T Consensus 77 ~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 155 (576)
T TIGR02204 77 ARFYLVTWLGERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGL-IMMFI 155 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 666666666666888999999999999999888654 6688899999999987766666555544444433322 22345
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 000711 246 ASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMR 325 (1338)
Q Consensus 246 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~ 325 (1338)
++|.+++++++..++..++..++.++..+...+.++.++++...+.+..+++++||.++.|+.+.+++.+.+++..+...
T Consensus 156 ~~~~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~ 235 (576)
T TIGR02204 156 TSPKLTSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAAR 235 (576)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 67877777766666665666667888888888888888888888999999999999999999999888888777666544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 326 VVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNR 405 (1338)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~ 405 (1338)
+..+...+...+..++. ++.....+++....++.|. .+.|.. ++ +..+...++.++..+...+..+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~v~~g~-----lt~g~~--~~----~~~~~~~~~~pl~~~~~~~~~~~~ 303 (576)
T TIGR02204 236 QRIRTRALLTAIVIVLV-FGAIVGVLWVGAHDVIAGK-----MSAGTL--GQ----FVFYAVMVAGSIGTLSEVWGELQR 303 (576)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCC-----CCHHHH--HH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43332222222221111 0111111111111122232 355533 22 122344556788888889999999
Q ss_pred HHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCC--CeeeeeeeEEEeCCCEEEEEcCCCCc
Q 000711 406 LSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLLITGPNGSG 483 (1338)
Q Consensus 406 ~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~sGsG 483 (1338)
...+.+|+.++++.+++.+..... . .. ..+..+.|+++||+|.||++ +++|+|+||+++|||+++|+||||||
T Consensus 304 ~~~~~~ri~~~l~~~~~~~~~~~~-~---~~-~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsG 378 (576)
T TIGR02204 304 AAGAAERLIELLQAEPDIKAPAHP-K---TL-PVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAG 378 (576)
T ss_pred HHHHHHHHHHHhCCCCcCCCCCCC-c---cC-CcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCC
Confidence 999999999998765432211000 0 00 00113469999999999853 68999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHH
Q 000711 484 KSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKN 557 (1338)
Q Consensus 484 KSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~ 557 (1338)
||||+++|+|+|+|++|+|.+||.+ .+++++++|+||+|++|++|++|||.++.+. .+++++.++++.
T Consensus 379 KSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~------~~~~~~~~~l~~ 452 (576)
T TIGR02204 379 KSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPD------ATDEEVEAAARA 452 (576)
T ss_pred HHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCC------CCHHHHHHHHHH
Confidence 9999999999999999999999965 2456789999999999999999999997642 467899999999
Q ss_pred cCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEe
Q 000711 558 VDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITIS 632 (1338)
Q Consensus 558 ~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~it 632 (1338)
+++.++++++|.+.++ ++|.+||||||||++||||++++|+++|||||||+||+++++.+++.+++ .++|+|+||
T Consensus 453 ~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~Iiit 532 (576)
T TIGR02204 453 AHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIA 532 (576)
T ss_pred cCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 9999999999876443 47889999999999999999999999999999999999999999998876 489999999
Q ss_pred cChhhHhhcceEEEccCC
Q 000711 633 HRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 633 H~~~~~~~~d~i~~l~~~ 650 (1338)
||++.++.+|++++++++
T Consensus 533 H~~~~~~~~d~vi~l~~g 550 (576)
T TIGR02204 533 HRLATVLKADRIVVMDQG 550 (576)
T ss_pred cchHHHHhCCEEEEEECC
Confidence 999999999999999874
No 53
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.6e-58 Score=573.47 Aligned_cols=194 Identities=21% Similarity=0.329 Sum_probs=162.0
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCccccccEEEEecCC
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRP 522 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~ 522 (1338)
..|+++||++.|++++++|+|+||+|++|++++|+||||||||||+|+|+|+++|++|+|.+++ +..++||||+|
T Consensus 5 ~~l~i~~l~~~y~~~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~-----~~~i~~v~Q~~ 79 (556)
T PRK11819 5 YIYTMNRVSKVVPPKKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAP-----GIKVGYLPQEP 79 (556)
T ss_pred EEEEEeeEEEEeCCCCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----CCEEEEEecCC
Confidence 3699999999996357899999999999999999999999999999999999999999999875 24799999999
Q ss_pred CCCCC-CHHHHhcCCCCCC--------------cccC----------------------CCCHHHHHHHHHHcCCchHHh
Q 000711 523 YTAVG-TLRDQLIYPLTSD--------------QEVE----------------------PLTHGGMVELLKNVDLEYLLD 565 (1338)
Q Consensus 523 ~l~~~-tl~eni~~~~~~~--------------~~~~----------------------~~~~~~~~~~l~~~~l~~~~~ 565 (1338)
.+++. |++||+.++.... .... ...++++.++++.+++.. .+
T Consensus 80 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~ 158 (556)
T PRK11819 80 QLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCPP-WD 158 (556)
T ss_pred CCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCCc-cc
Confidence 88764 9999998753100 0000 001235566777777743 33
Q ss_pred cCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHccCCeEEEEecChhhHh-hcceE
Q 000711 566 RYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVA-FHDVV 644 (1338)
Q Consensus 566 ~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~itH~~~~~~-~~d~i 644 (1338)
+.+ .+||||||||++|||||+.+|+++||||||++||+.+..++.+.+++.+.|+|+|||+++.+. .+|+|
T Consensus 159 ~~~--------~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~~tviiisHd~~~~~~~~d~i 230 (556)
T PRK11819 159 AKV--------TKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYPGTVVAVTHDRYFLDNVAGWI 230 (556)
T ss_pred Cch--------hhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeE
Confidence 333 689999999999999999999999999999999999999999999987779999999999875 68999
Q ss_pred EEccCC
Q 000711 645 LSLDGE 650 (1338)
Q Consensus 645 ~~l~~~ 650 (1338)
++|+++
T Consensus 231 ~~l~~g 236 (556)
T PRK11819 231 LELDRG 236 (556)
T ss_pred EEEeCC
Confidence 999863
No 54
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.2e-57 Score=584.83 Aligned_cols=462 Identities=16% Similarity=0.155 Sum_probs=317.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhH----
Q 000711 810 ASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVK---- 884 (1338)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~-~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~---- 884 (1338)
+..+..+...++..++..+...++...++++.++. ..||+. ...++..+|++ |++.+.+.+...+..++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~~~~----~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~ 262 (686)
T TIGR03797 188 GAAAFQLAQSLAVLRLETRMDASLQAAVWDRLLRLPVSFFRQ----YSTGDLASRAM-GISQIRRILSGSTLTTLLSGIF 262 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHCC----CChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444445555555555666666666666664 356653 23467788987 677776665543322222
Q ss_pred ---hHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChH
Q 000711 885 ---PSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGA 961 (1338)
Q Consensus 885 ---~~~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~ 961 (1338)
.++.+++++|.++++.. +++.+++++. ....+.......+..+..+.......+...+.++++.++.+.
T Consensus 263 ~~~~~~~l~~~~~~l~li~l----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 334 (686)
T TIGR03797 263 ALLNLGLMFYYSWKLALVAV----ALALVAIAVT----LVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAEN 334 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccH
Confidence 12223455666654421 1111111111 111122233334444444444555556667889999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHHHHHHHHH
Q 000711 962 REKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQ 1041 (1338)
Q Consensus 962 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~ 1041 (1338)
.....+++.+.+..+...+..+...+...+..++.. +...+.++++........ .+.|.+..+. .+...
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-----~~~~~il~~g~~lv~~g~--ltiG~lva~~----~l~~~ 403 (686)
T TIGR03797 335 RAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPV-----LTSAALFAAAISLLGGAG--LSLGSFLAFN----TAFGS 403 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcCC--CCHHHHHHHH----HHHHH
Confidence 887777777777666555444333333222222211 111111222211110100 1334443332 23345
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCC-ccccccccc
Q 000711 1042 SFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLT 1120 (1338)
Q Consensus 1042 ~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~-~~~vL~~ls 1120 (1338)
...++..+......+.+...+.+|+.++.+.+++.++. .. +.....|.|+|+||+|+||+ ++++|+|+|
T Consensus 404 ~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~-----~~-----~~~~~~~~I~~~nvsf~Y~~~~~~vL~~is 473 (686)
T TIGR03797 404 FSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA-----KT-----DPGKLSGAIEVDRVTFRYRPDGPLILDDVS 473 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC-----cC-----CCCCCCceEEEEEEEEEcCCCCccceeeeE
Confidence 56678888888888999999999999987643321110 00 01112578999999999964 678999999
Q ss_pred eEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCch
Q 000711 1121 FEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSR 1198 (1338)
Q Consensus 1121 f~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~ 1198 (1338)
|+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|++++ +.+|++|+||||||+||+|||||||.++.+
T Consensus 474 l~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~- 552 (686)
T TIGR03797 474 LQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP- 552 (686)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-
Confidence 99999999999999999999999999999999999999999999987 467788999999999999999999987532
Q ss_pred HHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEE
Q 000711 1199 EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFG 1277 (1338)
Q Consensus 1199 ~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~IL 1277 (1338)
..|++++++++.++++++++++|+||||.+ ++|.+||||||||||||||++++|+||
T Consensus 553 ----------------------~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iL 610 (686)
T TIGR03797 553 ----------------------LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRIL 610 (686)
T ss_pred ----------------------CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 124556677777788888888999999998 578999999999999999999999999
Q ss_pred EeecCCCCCCHHHHHHHHHHHHhcCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1278 ILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1278 iLDEATSaLD~~te~~i~~~~~~~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
|||||||+||.++|+.+.+.++..++|+|+||||+++++.+|++++|++|+
T Consensus 611 iLDEpTS~LD~~te~~i~~~L~~~~~T~IiItHr~~~i~~~D~Iivl~~G~ 661 (686)
T TIGR03797 611 LFDEATSALDNRTQAIVSESLERLKVTRIVIAHRLSTIRNADRIYVLDAGR 661 (686)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHhCCeEEEEecChHHHHcCCEEEEEECCE
Confidence 999999999999999999888767899999999999999999999997763
No 55
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.7e-56 Score=518.81 Aligned_cols=513 Identities=17% Similarity=0.222 Sum_probs=389.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000711 109 ALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHTRYF 188 (1338)
Q Consensus 109 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~R~~lt~~l~~~~~ 188 (1338)
+..++.++..++....+.+.....+.++.... +.. ++..++..++..++.....|...+++-+--..+...+|++.|
T Consensus 4 i~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~--~~~-l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l 80 (559)
T COG4988 4 ISALLAVLSGIAIIAQAALLADILTKLIEGQL--FQS-LLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVL 80 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556666666677777777777776654 222 222333333444566778888888888888888889999999
Q ss_pred cccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Q 000711 189 ENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTMMRN 267 (1338)
Q Consensus 189 ~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~~~~~ 267 (1338)
++.......+..+. .+...+.+++-|+.+...+...+...+.+.+.-++.. ...++.+|.-++++++.+|+.-+.+..
T Consensus 81 ~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~-i~v~~~~w~aalIllit~PlIPlfMil 159 (559)
T COG4988 81 DKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLIL-IAIFFFNWAAALILLITAPLIPLFMIL 159 (559)
T ss_pred HHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99988888777654 5688899999999988877777766555444332221 223456888888888887777666666
Q ss_pred HhhhHHHHHHHHHHHHHHHH-HHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 268 FSPAFGKLMSKEQQLEGEYR-QLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLG 346 (1338)
Q Consensus 268 ~~~~~~~l~~~~~~~e~~~r-~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (1338)
++..-++...++-+..+++. ..+.+++ +.+++|+|+..+...+++.+.-.+..+...+..+..+..+.+..++. +++
T Consensus 160 vg~~a~~~s~~~~~~~~~ls~~FLD~Lr-GL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa-~ls 237 (559)
T COG4988 160 VGLAAKDASEKQFSALARLSGHFLDRLR-GLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFA-YLS 237 (559)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhc-ChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 77776666666666666654 4567776 89999999999999988877766666666677777777666666553 333
Q ss_pred HHHHHHHHHHhHhc-ccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 000711 347 ATVAVILIIEPFFA-GNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSI 425 (1338)
Q Consensus 347 ~~~~~~~~~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~~~~~~~~~ 425 (1338)
.++..+.+...+.+ |. .++..+ + .++-...-+|.|+.++...++.-....++.+.+..+++.+.+...
T Consensus 238 iAlvAv~~g~~ll~~G~-----ltl~~~--l----~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~ 306 (559)
T COG4988 238 IALVAVYIGFRLLGEGD-----LTLFAG--L----FVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPG 306 (559)
T ss_pred HHHHHHHHHHHHHccCC-----ccHHHH--H----HHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCC
Confidence 33333333222333 32 233221 1 122344578899999999999988889999999999886554321
Q ss_pred cCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeC
Q 000711 426 EDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKP 505 (1338)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~ 505 (1338)
...... ....+.-.++.+|+++.||+++++++|+||++++|+.++|+|+||||||||+++|+|+.+|++|+|.+|
T Consensus 307 ~~~~~~-----~~~~~~~ei~~~~l~~~y~~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vn 381 (559)
T COG4988 307 SGEKAE-----VANEPPIEISLENLSFRYPDGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVN 381 (559)
T ss_pred Cccccc-----cccCCCceeeecceEEecCCCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEEC
Confidence 110000 001112345566999999998899999999999999999999999999999999999999999999999
Q ss_pred CCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---cCC
Q 000711 506 GVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWG 576 (1338)
Q Consensus 506 ~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g 576 (1338)
|.+ ..++++++||||+||+|.||+||||.++.+. .+++++.++++.+++.++++. |.+.++ +.|
T Consensus 382 g~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~------~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G 454 (559)
T COG4988 382 GIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPD------ASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGG 454 (559)
T ss_pred CccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCc------CCHHHHHHHHHHhcHHHhhcC-CCcccchhccCC
Confidence 976 3578999999999999999999999998753 578999999999999999998 765543 578
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 577 DELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 577 ~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
..|||||+|||++||||+++++++++|||||+||.++|+.|.+.+.+ +++|+|+||||+..+..+|+|++|+++
T Consensus 455 ~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G 530 (559)
T COG4988 455 AGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNG 530 (559)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCC
Confidence 89999999999999999999999999999999999999999998875 489999999999999999999999974
No 56
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=7.2e-59 Score=574.40 Aligned_cols=194 Identities=22% Similarity=0.374 Sum_probs=167.8
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------c-ccccE
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEI 515 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~-~~~~i 515 (1338)
..++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. . .+..+
T Consensus 10 ~~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 10 PLLCARSISKQYS-GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred ceEEEEeEEEEeC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 3699999999996 46799999999999999999999999999999999999999999999998541 1 12469
Q ss_pred EEEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 516 FYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 516 ~~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
+|+||++.++. .|++||+.++.... ...++++.++++.+++.+..++.+ .+||||||||++|||||+
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~la~aL~ 156 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKR----QASMQKMKQLLAALGCQLDLDSSA--------GSLEVADRQIVEILRGLM 156 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccc----hHHHHHHHHHHHHcCCCccccCCh--------hhCCHHHHHHHHHHHHHH
Confidence 99999998766 49999999864321 123456788999999987776655 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..||++++|++
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 157 RDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRD 215 (510)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999988764 489999999999977 47999999986
No 57
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.7e-57 Score=513.33 Aligned_cols=534 Identities=18% Similarity=0.214 Sum_probs=347.7
Q ss_pred hHHHHHHHHHHhcccCchhH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh-cChhHHH----HHHHHHHHHHHHHH
Q 000711 85 LKSLQVLAAILLSEMGKMGA-RDLLALVGIVVLRTALSNRLAKVQGFLFRAAFL-RRVPLFF----QLISENILLCFLLS 158 (1338)
Q Consensus 85 ~~~l~~l~~~~~p~~~~~~~-~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~----~~~~~~~~~~~~~~ 158 (1338)
++.++.+..+.+|.-. ++. ..++..+++++.+-++.+.+|...+...+.+-+ +..|..+ ..+..+.+.-+...
T Consensus 10 ~~~~~~l~~~~~~k~~-p~~r~~v~~~l~~l~~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~ 88 (591)
T KOG0057|consen 10 LKILRSLVSYKWPKSR-PVLRFRVFPALGLLLGAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSS 88 (591)
T ss_pred hHHHHHHHhhheecCC-ceeeehHHHHHHHHHhhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHH
Confidence 5667777777777433 222 224555666777788889999999988888742 2233211 22222333222333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHH
Q 000711 159 TMHSTSKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLL 237 (1338)
Q Consensus 159 ~~~~~~~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~ 237 (1338)
+++-+..++-....++ ..++...+.|.+...++++++.++ +|+....|..-...+.+.+...+..++..++-+.+
T Consensus 89 ~F~el~~~vfa~v~q~----~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~ 164 (591)
T KOG0057|consen 89 VFNELRNFVFAKVAQR----VIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIAL 164 (591)
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444444444 777777888888888888888654 55665555555555544444444444433332222
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHH
Q 000711 238 YTWRLCSYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKF 317 (1338)
Q Consensus 238 ~~~~l~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~ 317 (1338)
.+..+..-.++.+.++++..+...+.++..+...-.+...+..+++.+.....-....|-|.||.||-|+.|.++.....
T Consensus 165 v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l 244 (591)
T KOG0057|consen 165 VSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSL 244 (591)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHH
Confidence 11122222355555554333222222221111111111122223333333333333348999999999999986544443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 318 KALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLS 397 (1338)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~ 397 (1338)
.+..+ ...+.....++.+.+-...+......++... ..| +..+..++|...++. +.+..+-.++..+.
T Consensus 245 ~~~~~---~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~--~~g-i~~~~mtvgdlv~~n------~l~~qL~~~l~~Lg 312 (591)
T KOG0057|consen 245 KTYER---AGLKYSSSLAFLNFGQKAIFSVALTFIMVLG--SNG-IAAGKMTVGDLVMVN------SLLFQLSLPLNFLG 312 (591)
T ss_pred HHHHH---hhhhHHhHHHHHHHHHHHHHHHHHHHHHHHH--hhh-hhhccccccchhhHH------HHHHHHHhHHHHHH
Confidence 33332 2233333334333222111211111111111 112 222233565543332 33444445777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEE
Q 000711 398 ISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLIT 477 (1338)
Q Consensus 398 ~~~~~l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~ 477 (1338)
..+..+.+...-..-++.+.+....+. +.+ .......+.|+|+||+|+|++++++|+++||+|++||++||+
T Consensus 313 ~vyr~~~q~l~Dm~~~~~l~~~~~~i~--~~~------~~i~~~~~~I~F~dV~f~y~~k~~iL~gvsf~I~kGekVaIv 384 (591)
T KOG0057|consen 313 SVYRELRQALTDMRTLFILLEVDEDIQ--EAA------LPIELFGGSIEFDDVHFSYGPKRKVLKGVSFTIPKGEKVAIV 384 (591)
T ss_pred HHHHHHHHHHHhHHHHHhhhhhhhhhh--hcc------CCcccCCCcEEEEeeEEEeCCCCceecceeEEecCCCEEEEE
Confidence 777777766554444433322211111 100 011123467999999999998888999999999999999999
Q ss_pred cCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHH
Q 000711 478 GPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGM 551 (1338)
Q Consensus 478 G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~ 551 (1338)
|+|||||||++|+|.++++ ++|+|++||++ ..+|+.||||||+..||++||.+||.||.+. .+++++
T Consensus 385 G~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~s------as~eeV 457 (591)
T KOG0057|consen 385 GSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPS------ASDEEV 457 (591)
T ss_pred CCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCC------cCHHHH
Confidence 9999999999999999999 99999999987 3578899999999999999999999999764 688999
Q ss_pred HHHHHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCC
Q 000711 552 VELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGT 626 (1338)
Q Consensus 552 ~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~ 626 (1338)
.++++.+++++.+.++|.++.+ +.|..|||||||||+||||++++|+|+++|||||+||.++|+++.+.+.+ .++
T Consensus 458 ~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~r 537 (591)
T KOG0057|consen 458 VEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGR 537 (591)
T ss_pred HHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCC
Confidence 9999999999999999988776 57889999999999999999999999999999999999999999999876 499
Q ss_pred eEEEEecChhhHhhcceEEEccCC
Q 000711 627 SCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 627 t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
|+|+|.||+++++.+|+|++++++
T Consensus 538 TvI~IvH~l~ll~~~DkI~~l~nG 561 (591)
T KOG0057|consen 538 TVIMIVHRLDLLKDFDKIIVLDNG 561 (591)
T ss_pred eEEEEEecchhHhcCCEEEEEECC
Confidence 999999999999999999999984
No 58
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.5e-57 Score=520.02 Aligned_cols=207 Identities=28% Similarity=0.374 Sum_probs=188.0
Q ss_pred CCceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccE
Q 000711 1097 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGI 1174 (1338)
Q Consensus 1097 ~g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i 1174 (1338)
+|.|+|+||+|+|++.++||+|+||+|++||||||||+|||||||++++|+||+| .+|+|.|||+||+++ +.+|+-|
T Consensus 349 ~~~I~F~dV~f~y~~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~I 427 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYGPKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSI 427 (591)
T ss_pred CCcEEEEeeEEEeCCCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhhe
Confidence 5789999999999988999999999999999999999999999999999999999 999999999999998 5678889
Q ss_pred EEEcCCCCCCCCCHHHHhcCCCc--hHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-c
Q 000711 1175 FYVPQRPYTCLGTLRDQIIYPLS--REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-N 1251 (1338)
Q Consensus 1175 ~~VpQdP~LF~GTIReNL~~p~~--~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~ 1251 (1338)
++||||..||++||-+||.|+.. ++|++.++||.++ +++.+.++|+||+|.+ +
T Consensus 428 g~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~------------------------~hd~i~~l~~GY~T~VGe 483 (591)
T KOG0057|consen 428 GVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAG------------------------LHDVISRLPDGYQTLVGE 483 (591)
T ss_pred eEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcC------------------------cHHHHHhccccchhhHhh
Confidence 99999999999999999999653 5666667766655 3445667789999988 5
Q ss_pred ccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1252 WEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1252 ~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
+|..||||||||++||||+|++|+|+++|||||+||.+||+.+.+.+.. .++|+|.|+||+++++.+|+++++++|.
T Consensus 484 rG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~ 562 (591)
T KOG0057|consen 484 RGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGT 562 (591)
T ss_pred cccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCe
Confidence 8899999999999999999999999999999999999999998887654 5999999999999999999999997653
No 59
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-60 Score=525.06 Aligned_cols=259 Identities=24% Similarity=0.296 Sum_probs=225.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCCccccc
Q 000711 1037 SVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLA 1116 (1338)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~~~~vL 1116 (1338)
.++.|+..+++.+...++.++..-.-+|+++++.+.+++..+ .|..-|-...+|.|+|+||+|.|..++|||
T Consensus 483 TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd--------~P~a~pl~~~~G~i~fsnvtF~Y~p~k~vl 554 (790)
T KOG0056|consen 483 TYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVD--------LPGAPPLKVTQGKIEFSNVTFAYDPGKPVL 554 (790)
T ss_pred HHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhc--------CCCCCCccccCCeEEEEEeEEecCCCCcee
Confidence 344577789999999999999888889999998754332211 111113334579999999999998899999
Q ss_pred cccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcC
Q 000711 1117 RQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIY 1194 (1338)
Q Consensus 1117 ~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~ 1194 (1338)
+|+||++.||++||+|||||+||||++++|+||||.++|+|.|||+||+.+ ..+|++||+||||.+||+.||-+||.|
T Consensus 555 ~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIry 634 (790)
T KOG0056|consen 555 SDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRY 634 (790)
T ss_pred ecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheee
Confidence 999999999999999999999999999999999999999999999999988 678899999999999999999999999
Q ss_pred --CCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhh
Q 000711 1195 --PLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFF 1271 (1338)
Q Consensus 1195 --p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlL 1271 (1338)
|.+.+||+.+|+|.|++||.|..+ |+||+|.+ ++|-.||||||||+||||++|
T Consensus 635 ak~~AsneevyaAAkAA~IHdrIl~f------------------------PegY~t~VGERGLkLSGGEKQRVAiARtiL 690 (790)
T KOG0056|consen 635 AKPSASNEEVYAAAKAAQIHDRILQF------------------------PEGYNTRVGERGLKLSGGEKQRVAIARTIL 690 (790)
T ss_pred cCCCCChHHHHHHHHHhhHHHHHhcC------------------------chhhhhhhhhcccccCCcchhhHHHHHHHh
Confidence 556788889999998876554333 66777777 578889999999999999999
Q ss_pred cCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecC
Q 000711 1272 HKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDG 1327 (1338)
Q Consensus 1272 r~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g 1327 (1338)
++|.|++|||||||||..+|++||+.++. +++|.|+||||++||-.+|.+|++.+|
T Consensus 691 K~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G 748 (790)
T KOG0056|consen 691 KAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNG 748 (790)
T ss_pred cCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCC
Confidence 99999999999999999999999987754 699999999999999999999999776
No 60
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-59 Score=574.12 Aligned_cols=194 Identities=24% Similarity=0.301 Sum_probs=161.9
Q ss_pred EEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-------cccccEEEEe
Q 000711 447 FSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIFYVP 519 (1338)
Q Consensus 447 ~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~~v~ 519 (1338)
++|+++.|+ ++++|+|+||++++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. ..++.++|+|
T Consensus 1 ~~nl~~~~~-~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~ 79 (491)
T PRK10982 1 MSNISKSFP-GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMVH 79 (491)
T ss_pred CCceEEEeC-CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEEe
Confidence 368899885 46899999999999999999999999999999999999999999999998641 1245799999
Q ss_pred cCCCCCC-CCHHHHhcCCCCCC-cc--cCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000711 520 QRPYTAV-GTLRDQLIYPLTSD-QE--VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1338)
Q Consensus 520 Q~~~l~~-~tl~eni~~~~~~~-~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1338)
|++.++. .|++||+.++.... .. ......+++.++++.+++.+..++.+ .+||||||||++|||||++
T Consensus 80 q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgGq~qrv~lA~al~~ 151 (491)
T PRK10982 80 QELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV--------ATLSVSQMQMIEIAKAFSY 151 (491)
T ss_pred cccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch--------hhCCHHHHHHHHHHHHHHh
Confidence 9997654 59999998764211 00 00111245678888888876666544 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 596 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 596 ~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
+|+++||||||++||+.+.+.+++.+++ .|+|+|+|||+++.+. .||++++|++
T Consensus 152 ~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~ 209 (491)
T PRK10982 152 NAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRD 209 (491)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999888754 5899999999999875 7999999986
No 61
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.2e-56 Score=603.38 Aligned_cols=529 Identities=17% Similarity=0.183 Sum_probs=362.6
Q ss_pred HHHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcC-hh-HHHHHHHHHHHHHHHHHHHHHHH
Q 000711 87 SLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRR-VP-LFFQLISENILLCFLLSTMHSTS 164 (1338)
Q Consensus 87 ~l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~ 164 (1338)
++.++++.++|+++. +++.++++++...+....|.+.+.+++.+.... .. ......+.+++++++..++..+.
T Consensus 812 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~ 886 (1466)
T PTZ00265 812 NLRIVYREIFSYKKD-----VTIIALSILVAGGLYPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLK 886 (1466)
T ss_pred hHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777888887663 445555666777788888999999888776421 11 11111111222222222334445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCC---CCCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 000711 165 KYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDG---RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWR 241 (1338)
Q Consensus 165 ~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~---~~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~ 241 (1338)
.|+..+++.+ +..++|.+.|+++++.+++|||+ ..++..+|+++|++.+.+.+...+..++..++..+ ++..
T Consensus 887 ~~~~~~~~~~----~~~~lR~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i-~~~~ 961 (1466)
T PTZ00265 887 NYYNNVIGEK----VEKTMKRRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFL-VSMV 961 (1466)
T ss_pred HHHHHHHHHH----HHHHHHHHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 5555555555 88899999999999999999984 35788999999999988777766555554444332 2333
Q ss_pred HHHhchhhHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HH-----------------HHHHHHHHHHHHHHHHhHHHHHHh
Q 000711 242 LCSYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMS-KE-----------------QQLEGEYRQLHSRLRTHAESIAFY 303 (1338)
Q Consensus 242 l~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~-~~-----------------~~~e~~~r~~~~~i~~~~e~I~~~ 303 (1338)
++++.+|.++++++..+ .++...+.+....... +. ++..++......+...++++|+.|
T Consensus 962 ~~~~~~~~l~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~ 1038 (1466)
T PTZ00265 962 MSFYFCPIVAAVLTGTY---FIFMRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIY 1038 (1466)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHh
Confidence 44556776665543222 2222223332221111 11 112234455566677799999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccc-CCcchhhHHHHHHHHHHH
Q 000711 304 GGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYH 382 (1338)
Q Consensus 304 ~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~g~~~~~~~~~~~ 382 (1338)
+.|+.+.+++.+..+...+...+ ...+.++...+.........++++ ++++.+. .+..++|.. ++.+.
T Consensus 1039 ~~e~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----~~G~~lv~~g~it~g~l--~~~~~-- 1107 (1466)
T PTZ00265 1039 GLEDYFCNLIEKAIDYSNKGQKR---KTLVNSMLWGFSQSAQLFINSFAY----WFGSFLIRRGTILVDDF--MKSLF-- 1107 (1466)
T ss_pred cchHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHcCCCCHHHH--HHHHH--
Confidence 99999987666655544332222 222223322222111111111222 2333322 223355543 22211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCC--CCee
Q 000711 383 TSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT--GNVL 460 (1338)
Q Consensus 383 ~~~~~~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~--~~~~ 460 (1338)
.+.....++..+...+..+++...+++|++++++.+++.+..+..... ........+.|+|+||+|.||+ ++++
T Consensus 1108 --~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~--~~~~~~~~g~I~f~nVsF~Y~~~~~~~v 1183 (1466)
T PTZ00265 1108 --TFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIR--IKNKNDIKGKIEIMDVNFRYISRPNVPI 1183 (1466)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccc--cccCCCCCceEEEEEEEEECCCCCCCcc
Confidence 111122345667777888999999999999999865543211100000 0000012357999999999985 3589
Q ss_pred eeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-------------------------------------------
Q 000711 461 VENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL------------------------------------------- 497 (1338)
Q Consensus 461 l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~------------------------------------------- 497 (1338)
|+|+||+|++|+++|||||||||||||+++|+|+|+|
T Consensus 1184 L~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1263 (1466)
T PTZ00265 1184 YKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKE 1263 (1466)
T ss_pred ccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999998
Q ss_pred -----------CccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCC
Q 000711 498 -----------VSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDL 560 (1338)
Q Consensus 498 -----------~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l 560 (1338)
++|+|.+||.+ .++|++|+||||+|++|+|||||||.|+.+ ..++++++++++.+++
T Consensus 1264 ~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~------~at~eeI~~A~k~A~l 1337 (1466)
T PTZ00265 1264 GGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKE------DATREDVKRACKFAAI 1337 (1466)
T ss_pred cccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCC------CCCHHHHHHHHHHcCC
Confidence 69999999986 357889999999999999999999999854 2578999999999999
Q ss_pred chHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEec
Q 000711 561 EYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISH 633 (1338)
Q Consensus 561 ~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH 633 (1338)
++++.++|.+.++ +.|.+|||||||||||||||+++|+|||||||||+||+++|+.+++.+.+ .++|+|+|||
T Consensus 1338 ~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaH 1417 (1466)
T PTZ00265 1338 DEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAH 1417 (1466)
T ss_pred HHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEec
Confidence 9999999987665 46789999999999999999999999999999999999999999998875 3899999999
Q ss_pred ChhhHhhcceEEEccC
Q 000711 634 RPALVAFHDVVLSLDG 649 (1338)
Q Consensus 634 ~~~~~~~~d~i~~l~~ 649 (1338)
|+++++.||+|++|++
T Consensus 1418 Rlsti~~aD~Ivvl~~ 1433 (1466)
T PTZ00265 1418 RIASIKRSDKIVVFNN 1433 (1466)
T ss_pred hHHHHHhCCEEEEEeC
Confidence 9999999999999987
No 62
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=3e-57 Score=583.30 Aligned_cols=463 Identities=16% Similarity=0.164 Sum_probs=314.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhH-------
Q 000711 813 FIAPSIRHLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVK------- 884 (1338)
Q Consensus 813 ~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~-~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~------- 884 (1338)
+..+...++..++..+...++..++++.+++. ..||+. ...++..+|++ |++.+.+.+......++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~----~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~ 285 (708)
T TIGR01193 211 ILSYIQIFLLNVLGQRLSIDIILSYIKHLFELPMSFFST----RRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVI 285 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC----CchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444555555555666666666654 356653 34567889997 787776655543322222
Q ss_pred hHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHHH
Q 000711 885 PSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREK 964 (1338)
Q Consensus 885 ~~~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e~ 964 (1338)
.++.+++++|.++++.. +.+++++++ .....++..+...+..+..+.......+...+.++|++++.+..+.
T Consensus 286 ~~~~l~~~~~~l~li~l----~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~ 357 (708)
T TIGR01193 286 VGLFLVRQNMLLFLLSL----LSIPVYAVI----IILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERY 357 (708)
T ss_pred HHHHHHHHhHHHHHHHH----HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHH
Confidence 12233456666654421 111111111 1122222333444444444445545555666789999999988887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHHHHHHHHHHHH
Q 000711 965 AMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFL 1044 (1338)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~~~~ 1044 (1338)
+.+++.+.+..+...+..+..........++... ...+.++++....... ..+.|.+..+. .+....+.
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~il~~g~~lv~~g--~ls~G~lva~~----~l~~~~~~ 426 (708)
T TIGR01193 358 SKIDSEFGDYLNKSFKYQKADQGQQAIKAVTKLI-----LNVVILWTGAYLVMRG--KLTLGQLITFN----ALLSYFLT 426 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHcC--CCCHHHHHHHH----HHHHHHHH
Confidence 7777777766655443332222222211111111 1111122221111010 11344443332 23345667
Q ss_pred HHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCCccccccccceEEe
Q 000711 1045 AFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEIV 1124 (1338)
Q Consensus 1045 ~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~~~~vL~~lsf~I~ 1124 (1338)
++..+......+.+...+.+|+.++.+.+++.++.. .....+ ...|.|+|+||+|+|++++++|+|+||+|+
T Consensus 427 pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~-----~~~~~~---~~~~~I~~~~vsf~y~~~~~iL~~isl~i~ 498 (708)
T TIGR01193 427 PLENIINLQPKLQAARVANNRLNEVYLVDSEFINKK-----KRTELN---NLNGDIVINDVSYSYGYGSNILSDISLTIK 498 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc-----cccCCC---CCCCcEEEEEEEEEcCCCCcceeceeEEEC
Confidence 888888888889999999999999876543321110 001111 125789999999999877889999999999
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHH
Q 000711 1125 PGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAE 1202 (1338)
Q Consensus 1125 ~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~ 1202 (1338)
|||++|||||||||||||+++|.|+|+|++|+|++||+|++++ +.+|++|+||||||+||+|||||||.++..
T Consensus 499 ~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~----- 573 (708)
T TIGR01193 499 MNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAK----- 573 (708)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCC-----
Confidence 9999999999999999999999999999999999999999988 467788999999999999999999987521
Q ss_pred HHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEEeec
Q 000711 1203 LRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDE 1281 (1338)
Q Consensus 1203 ~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDE 1281 (1338)
++..|++++++++.+++.++++++|.||||.+ ++|.+|||||||||+||||++++|+||||||
T Consensus 574 ----------------~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRialARall~~p~iliLDE 637 (708)
T TIGR01193 574 ----------------ENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIALARALLTDSKVLILDE 637 (708)
T ss_pred ----------------CCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Confidence 01224455666666677777888899999998 5789999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHh-cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1282 CTNATSVDVEEQLYRLAKD-MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1282 ATSaLD~~te~~i~~~~~~-~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
|||+||.++|+.+++.++. .++|+|+||||+++++.+|++++|++|+
T Consensus 638 ~Ts~LD~~te~~i~~~L~~~~~~T~IiitHr~~~~~~~D~i~~l~~G~ 685 (708)
T TIGR01193 638 STSNLDTITEKKIVNNLLNLQDKTIIFVAHRLSVAKQSDKIIVLDHGK 685 (708)
T ss_pred ccccCCHHHHHHHHHHHHHhcCCEEEEEecchHHHHcCCEEEEEECCE
Confidence 9999999999999887754 5899999999999999999999998764
No 63
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=2.3e-57 Score=566.38 Aligned_cols=201 Identities=21% Similarity=0.331 Sum_probs=159.3
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCccccccEEEEecCCC
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPY 523 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~ 523 (1338)
.++++|+++.|++++++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.+++ +..|+||||+|+
T Consensus 4 ~i~~~nls~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----~~~i~~v~Q~~~ 78 (552)
T TIGR03719 4 IYTMNRVSKVVPPKKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-----GIKVGYLPQEPQ 78 (552)
T ss_pred EEEEeeEEEecCCCCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----CCEEEEEeccCC
Confidence 589999999997457899999999999999999999999999999999999999999999875 347999999998
Q ss_pred CCC-CCHHHHhcCCCCCC--------------cccCCC------CHHHHHHHHHHcCCch-------HHhcCCCCccccC
Q 000711 524 TAV-GTLRDQLIYPLTSD--------------QEVEPL------THGGMVELLKNVDLEY-------LLDRYPPEKEINW 575 (1338)
Q Consensus 524 l~~-~tl~eni~~~~~~~--------------~~~~~~------~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~~ 575 (1338)
++. .|++||+.++.... ...... ...++.++++.++..+ .++.+..+.....
T Consensus 79 ~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 158 (552)
T TIGR03719 79 LDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCPPWDAD 158 (552)
T ss_pred CCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCCcccCc
Confidence 865 59999998753210 000000 0123444455554332 1112111111112
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHccCCeEEEEecChhhHh-hcceEEEccC
Q 000711 576 GDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 576 g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
..+||||||||++|||||+.+|+++||||||++||+.+.+++.+.+++.+.|+|+|||+++.+. .||++++|++
T Consensus 159 ~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~~~tvIiisHd~~~~~~~~d~v~~l~~ 233 (552)
T TIGR03719 159 VTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEYPGTVVAVTHDRYFLDNVAGWILELDR 233 (552)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEEC
Confidence 4689999999999999999999999999999999999999999999887789999999999876 6899999986
No 64
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=5.3e-57 Score=581.69 Aligned_cols=472 Identities=20% Similarity=0.204 Sum_probs=316.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHhH-
Q 000711 809 AASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPS- 886 (1338)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~-~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~~- 886 (1338)
++..+..+...++..++..+....+..+++++.++- ..||+. ...++..+|++.| +.+...+...+..++..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~----~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~ 279 (710)
T TIGR03796 205 LLQGVLTWLQLYYLRRLQIKLAVGMSARFLWHILRLPVRFFAQ----RHAGDIASRVQLN-DQVAEFLSGQLATTALDAV 279 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC----CcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHH
Confidence 333444444455555555566666666666666664 356652 3456788999888 556655544333322222
Q ss_pred ------HHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCCh
Q 000711 887 ------VDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGG 960 (1338)
Q Consensus 887 ------~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~ 960 (1338)
+.+++++|.++++. ++.++++++ +.....+.......+.++..+.......+...+.++|+.++.+
T Consensus 280 ~~~~~~~~l~~~~~~l~li~----l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e 351 (710)
T TIGR03796 280 MLVFYALLMLLYDPVLTLIG----IAFAAINVL----ALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLE 351 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCC
Confidence 22345566655442 111111111 1111122222333333333444444445555678999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHHHHHHHH
Q 000711 961 AREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVS 1040 (1338)
Q Consensus 961 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~ 1040 (1338)
....+.+.+.+.+..+...+..+...+......++..... .+.++++....... ..+.|.+..+. .+..
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~il~~g~~~v~~g--~lt~G~lva~~----~l~~ 420 (710)
T TIGR03796 352 SDFFSRWAGYQAKLLNAQQELGVLTQILGVLPTLLTSLNS-----ALILVVGGLRVMEG--QLTIGMLVAFQ----SLMS 420 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHcC--CCCHHHHHHHH----HHHH
Confidence 8887777777766666544433333222222222221111 11122221110000 01344443332 2344
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCC-cccccccc
Q 000711 1041 QSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQL 1119 (1338)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~-~~~vL~~l 1119 (1338)
....++..+......+.+...+.+|+.++.+.+++.+........... . +.....|.|+|+||+|+||+ .+++|+|+
T Consensus 421 ~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~-~-~~~~~~~~I~~~~vsf~y~~~~~~vL~~i 498 (710)
T TIGR03796 421 SFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGS-E-PSPRLSGYVELRNITFGYSPLEPPLIENF 498 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccccccc-c-cCCCCCCeEEEEEEEEecCCCCCCcccce
Confidence 556678888888888999999999999987654332111000000000 0 10112578999999999986 57899999
Q ss_pred ceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCc
Q 000711 1120 TFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLS 1197 (1338)
Q Consensus 1120 sf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~ 1197 (1338)
||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||.|++++ ..+|++|+||||||+||+|||||||.++.+
T Consensus 499 sl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~ 578 (710)
T TIGR03796 499 SLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDP 578 (710)
T ss_pred eEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCC
Confidence 999999999999999999999999999999999999999999999987 456789999999999999999999986421
Q ss_pred hHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCE
Q 000711 1198 REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKF 1276 (1338)
Q Consensus 1198 ~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~I 1276 (1338)
+..|++++++++.++++++++++|+||||.+ ++|.+||||||||||||||++++|+|
T Consensus 579 ----------------------~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~i 636 (710)
T TIGR03796 579 ----------------------TIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPSI 636 (710)
T ss_pred ----------------------CCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCCE
Confidence 1234556667777777788888899999998 57899999999999999999999999
Q ss_pred EEeecCCCCCCHHHHHHHHHHHHhcCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1277 GILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1277 LiLDEATSaLD~~te~~i~~~~~~~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
|||||||||||.++|+.+.+.+++.++|+|+||||+++++.+|++++|++|+
T Consensus 637 liLDEptS~LD~~te~~i~~~l~~~~~T~IiitHrl~~i~~~D~Iivl~~G~ 688 (710)
T TIGR03796 637 LILDEATSALDPETEKIIDDNLRRRGCTCIIVAHRLSTIRDCDEIIVLERGK 688 (710)
T ss_pred EEEECccccCCHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEeCCE
Confidence 9999999999999999998887778999999999999999999999997763
No 65
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.4e-58 Score=571.20 Aligned_cols=189 Identities=22% Similarity=0.247 Sum_probs=162.5
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------cccccEEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEIFY 517 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i~~ 517 (1338)
.|+++|+++.|++ +++|+|+||++++||+++|+||||||||||+|+|+|+.+|++|+|.++|.+. ..++.++|
T Consensus 3 ~l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~~ 81 (490)
T PRK10938 3 SLQISQGTFRLSD-TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVSD 81 (490)
T ss_pred eEEEEeEEEEcCC-eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhce
Confidence 4899999999964 5699999999999999999999999999999999999999999999987531 12346999
Q ss_pred EecCCCC--C-------CCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHH
Q 000711 518 VPQRPYT--A-------VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1338)
Q Consensus 518 v~Q~~~l--~-------~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1338)
++|++.+ + ..|+++|+.++. ..++++.++++.+++++..++.+ .+||||||||++
T Consensus 82 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~ 145 (490)
T PRK10938 82 EWQRNNTDMLSPGEDDTGRTTAEIIQDEV--------KDPARCEQLAQQFGITALLDRRF--------KYLSTGETRKTL 145 (490)
T ss_pred eccCcchhhcccchhhccccHHHhcccch--------hHHHHHHHHHHHcCCHhhhhCCc--------ccCCHHHHHHHH
Confidence 9998753 1 348888876531 12456788999999988877766 689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 589 lARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|||||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 146 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~ 210 (490)
T PRK10938 146 LCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLAD 210 (490)
T ss_pred HHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEEC
Confidence 99999999999999999999999999999988765 3899999999998774 7999999986
No 66
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.6e-56 Score=508.66 Aligned_cols=527 Identities=21% Similarity=0.237 Sum_probs=373.7
Q ss_pred HHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHH---HHHHHHHHHHHH
Q 000711 91 LAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCF---LLSTMHSTSKYI 167 (1338)
Q Consensus 91 l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l 167 (1338)
++.+++|+++ .+ +.+.+.+++.++....+..+=...|.|+.+-.-..... +..+++-.. ...+...+.+|.
T Consensus 4 l~p~i~l~~~-~~-~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~----~f~~~~p~a~VR~~aI~Rt~~RY~ 77 (573)
T COG4987 4 LLPYLRLYKR-HK-FGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAY----IFNVMLPSAGVRGLAILRTAARYV 77 (573)
T ss_pred chHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467777766 22 22455555556666666777788899887655333321 111111111 223446778999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccCC-CCCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Q 000711 168 TGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYA 246 (1338)
Q Consensus 168 ~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~-~~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~ 246 (1338)
+...+..+--++..++|.+.|++..-........ +.++...|+++||+.+.+.+...+.+.+.+++.+......+ .++
T Consensus 78 ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L-~f~ 156 (573)
T COG4987 78 ERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGL-SFF 156 (573)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHH-HHh
Confidence 9999999888899999999999887665554433 57799999999999999999998888777665554433333 345
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 000711 247 SPKYVFWILAYVLGAGTMMRNFSP-AFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMR 325 (1338)
Q Consensus 247 ~~~l~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~ 325 (1338)
+|.+++.+..+..+..+++.++.. .-++.+.+..+..+.+|........+.....+||.++...+.+...-+...+..+
T Consensus 157 ~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~ 236 (573)
T COG4987 157 SIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQR 236 (573)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHH
Confidence 777666655544444444444433 3333445555566677776666666766789999999988665554444444333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 000711 326 VVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLS-ISSRRLN 404 (1338)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~l~ 404 (1338)
+..+...+.+.+..++ .+..+... ..|+++....+..+.- ...+. .-.+...+.++..++ ..+..++
T Consensus 237 k~~~~~~~~~a~~~l~---~g~~v~~~---l~w~a~~~~~G~~~~~-~aa~~-----ll~~f~~~eaf~~L~~~A~~~lg 304 (573)
T COG4987 237 KQARFTGLSDAILLLI---AGLLVIGL---LLWMAAQVGAGALAQP-GAALA-----LLVIFAALEAFEPLAPGAFQHLG 304 (573)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHH---HHHHHhcCcCCCcchh-HHHHH-----HHHHHHHHHHHhhhcchhHHHhh
Confidence 3333222222222111 11111111 1133333322222211 11111 112234445555555 6667889
Q ss_pred HHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCCC-eeeeeeeEEEeCCCEEEEEcCCCCc
Q 000711 405 RLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGN-VLVENLTLKVEPGSNLLITGPNGSG 483 (1338)
Q Consensus 405 ~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~-~~l~~~sl~i~~G~~~~i~G~sGsG 483 (1338)
+...++.|+.++.+.+++...++.. .......++++||+|.||+.+ ++|+|+||++++||+++|+|+||||
T Consensus 305 q~~~Sa~Rl~~i~~q~~e~~~~~~~--------~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsG 376 (573)
T COG4987 305 QVIASARRLNDILDQKPEVTFPDEQ--------TATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSG 376 (573)
T ss_pred HHHHHHHHHhhhccCCcccCCCccc--------cCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCC
Confidence 9999999999988776654322110 111122799999999999865 8999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHH
Q 000711 484 KSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKN 557 (1338)
Q Consensus 484 KSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~ 557 (1338)
||||+++|.|-|+|++|+|..+|.+ +++++.+++++|++++|++|+|||+....++ .+|+++++++++
T Consensus 377 KSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~------AsDEel~~aL~q 450 (573)
T COG4987 377 KSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPD------ASDEELWAALQQ 450 (573)
T ss_pred HHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCC------CCHHHHHHHHHH
Confidence 9999999999999999999999975 2367789999999999999999999998653 689999999999
Q ss_pred cCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEe
Q 000711 558 VDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITIS 632 (1338)
Q Consensus 558 ~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~it 632 (1338)
+||++++...|.+..+ +.|..||||||||++|||+|+++.++++|||||.+||+.+|+++++.+.+ .|+|+|+||
T Consensus 451 vgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vT 530 (573)
T COG4987 451 VGLEKLLESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVT 530 (573)
T ss_pred cCHHHHHHhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEe
Confidence 9999999998865443 56899999999999999999999999999999999999999999999876 499999999
Q ss_pred cChhhHhhcceEEEccCC
Q 000711 633 HRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 633 H~~~~~~~~d~i~~l~~~ 650 (1338)
||+..++.+|+|++|+++
T Consensus 531 HrL~~le~~drIivl~~G 548 (573)
T COG4987 531 HRLRGLERMDRIIVLDNG 548 (573)
T ss_pred cccccHhhcCEEEEEECC
Confidence 999999999999999973
No 67
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=8.4e-56 Score=554.83 Aligned_cols=506 Identities=16% Similarity=0.160 Sum_probs=368.6
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 000711 115 VLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHTRYFENMAYY 194 (1338)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~ 194 (1338)
++...+.+..|.+.+.++|.+..+.... .. ++.+++++++..++..+..|+..++..+....+..+++.++++++...
T Consensus 5 ~~~~~~~~~~p~~~~~iid~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~ 82 (569)
T PRK10789 5 IIIAMLQLIPPKVVGIIVDGVTEQHMTT-GQ-ILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQ 82 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcch-hH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3444555677888888888776442211 11 122222222333344556677777777777778999999999999999
Q ss_pred cccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhhhHH
Q 000711 195 KISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTMMRNFSPAFG 273 (1338)
Q Consensus 195 ~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~ 273 (1338)
+.+++++. .++..+|+++|++.+...+...+..++..++..+.+.+.++.+++|.+++++++.+++..++..++.++..
T Consensus 83 ~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~ 162 (569)
T PRK10789 83 HPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLH 162 (569)
T ss_pred CHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998754 67999999999999876555555555554443333333333457888887777666666666666777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 274 KLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVIL 353 (1338)
Q Consensus 274 ~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (1338)
+...+.++..+++.....+...++++||.|+.|+.+.+++.+..++..+...+..+ ..+................++
T Consensus 163 ~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l 239 (569)
T PRK10789 163 ERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVAR---IDARFDPTIYIAIGMANLLAI 239 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777777777789999999999999997777766655443333222 222222211111111111111
Q ss_pred HHHhHhccccc-CCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCC
Q 000711 354 IIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQR 432 (1338)
Q Consensus 354 ~~~~~~~g~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~ 432 (1338)
+ +++.+. .+..+.|.. ++. ..+...++.++..+...+..+++...+.+|+.++++.+++.+....
T Consensus 240 ~----~g~~lv~~g~lt~g~l--~a~----~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~---- 305 (569)
T PRK10789 240 G----GGSWMVVNGSLTLGQL--TSF----VMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSE---- 305 (569)
T ss_pred H----HHHHHHHcCCcCHHHH--HHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCC----
Confidence 1 111111 122355543 222 2233445567777888888999999999999999876543211100
Q ss_pred CCCCCCcCCCCcEEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC---
Q 000711 433 NGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG--- 508 (1338)
Q Consensus 433 ~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~--- 508 (1338)
......+.|+++||+|.|+++ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 306 ----~~~~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~ 381 (569)
T PRK10789 306 ----PVPEGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTK 381 (569)
T ss_pred ----CCCCCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhh
Confidence 001123569999999999864 689999999999999999999999999999999999999999999999975
Q ss_pred ---ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---cCCCCCChh
Q 000711 509 ---SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLG 582 (1338)
Q Consensus 509 ---~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgG 582 (1338)
.+++++++|+||+|++|++|++|||.++.+. .+++++.++++.+++++++.++|.+.++ +.|.+||||
T Consensus 382 ~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~------~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgG 455 (569)
T PRK10789 382 LQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPD------ATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGG 455 (569)
T ss_pred CCHHHHHhheEEEccCCeeccccHHHHHhcCCCC------CCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHH
Confidence 2456789999999999999999999987532 4778999999999999999999876554 468899999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhhcceEEEccC
Q 000711 583 EQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 583 qkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i~~l~~ 649 (1338)
||||++||||++++|+++|||||||+||+++++.+++.+++ .++|+|+||||++.++.+|+|++|++
T Consensus 456 q~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~ 524 (569)
T PRK10789 456 QKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQH 524 (569)
T ss_pred HHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeC
Confidence 99999999999999999999999999999999999999876 58999999999999999999999986
No 68
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.9e-56 Score=559.06 Aligned_cols=461 Identities=21% Similarity=0.236 Sum_probs=311.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHh-------
Q 000711 814 IAPSIRHLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKP------- 885 (1338)
Q Consensus 814 ~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~-~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~------- 885 (1338)
..+...++..+.+.+...++..+++++.++. ..||+. ...++..+|+++|++.+...+...+..++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~----~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~ 151 (574)
T PRK11160 76 GRYGERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLAR----YRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVL 151 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHhhcc----CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444444444455555555555543 355553 2346788999999999988766544443322
Q ss_pred HHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHHHH
Q 000711 886 SVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKA 965 (1338)
Q Consensus 886 ~~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e~~ 965 (1338)
++.+++++|.++++... .+.+..++...+... .......+.++..+.+.....+...+.++++.|+.++.+.+
T Consensus 152 ~~~l~~~~~~l~l~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~ 224 (574)
T PRK11160 152 TIGLSFFDLTLALTLGG----ILLLLLLLLPLLFYR---LGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQ 224 (574)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHH
Confidence 23334667777654311 111111111111111 11222333444444555555566667899999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHHHHHHHHHHHHH
Q 000711 966 MIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLA 1045 (1338)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~~~~~ 1045 (1338)
.+++..++..+...+..+...+......++.. +...+.++++.....+ . .+.|.+..++.+.... ...+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~g~~~~~g-~--~t~g~l~a~~~~~~~~---~~~~ 293 (574)
T PRK11160 225 QLEQTEQQWLAAQRRQANLTGLSQALMILANG-----LTVVLMLWLAAGGVGG-N--AQPGALIALFVFAALA---AFEA 293 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHhcc-c--cchhHHHHHHHHHHHH---HHHH
Confidence 88777777666555444333322222222211 1112222222221111 0 1234443333222111 1234
Q ss_pred HHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCCc-cccccccceEEe
Q 000711 1046 FGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQ-KLLARQLTFEIV 1124 (1338)
Q Consensus 1046 ~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~~-~~vL~~lsf~I~ 1124 (1338)
+..+......+.+...+.+|+.++.+.+++.+.+ .... . ....+.|+|+||+|+||+. +++|+|+||+|+
T Consensus 294 ~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~----~~~~--~---~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~ 364 (574)
T PRK11160 294 LMPVAGAFQHLGQVIASARRINEITEQKPEVTFP----TTST--A---AADQVSLTLNNVSFTYPDQPQPVLKGLSLQIK 364 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC----cccC--C---CCCCCeEEEEEEEEECCCCCCcceecceEEEC
Confidence 4555666677788888999999987654321110 0000 0 1125789999999999864 689999999999
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHH
Q 000711 1125 PGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAE 1202 (1338)
Q Consensus 1125 ~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~ 1202 (1338)
|||++|||||||||||||+++|.|+|+|++|+|.+||+|++++ ..+|++|+||||||+||+|||||||.++.+
T Consensus 365 ~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~----- 439 (574)
T PRK11160 365 AGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAP----- 439 (574)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCC-----
Confidence 9999999999999999999999999999999999999999987 456778999999999999999999987532
Q ss_pred HHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEEeec
Q 000711 1203 LRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDE 1281 (1338)
Q Consensus 1203 ~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDE 1281 (1338)
+..|++++++++.+++++++++ |+||||.+ ++|.+||||||||+|||||++++|+||||||
T Consensus 440 -----------------~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRialARall~~~~ililDE 501 (574)
T PRK11160 440 -----------------NASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDE 501 (574)
T ss_pred -----------------ccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 1235567777888888888999 99999998 5789999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1282 CTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1282 ATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
|||+||.++|+.+++.++. .++|+|+||||+++++.+|++++|++|+
T Consensus 502 ~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~ 550 (574)
T PRK11160 502 PTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQ 550 (574)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCe
Confidence 9999999999999887754 4899999999999999999999998764
No 69
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-56 Score=564.34 Aligned_cols=191 Identities=23% Similarity=0.288 Sum_probs=156.1
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCccccccEEEEecCCCC
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYT 524 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~l 524 (1338)
|+++||++.|. ++++|+|+||+|++|++++|+||||||||||+|+|+|+.+|++|+|.++|. ..++|++|++..
T Consensus 2 i~i~nls~~~g-~~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~-----~~i~~~~q~~~~ 75 (638)
T PRK10636 2 IVFSSLQIRRG-VRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGN-----WQLAWVNQETPA 75 (638)
T ss_pred EEEEEEEEEeC-CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----CEEEEEecCCCC
Confidence 78999999995 578999999999999999999999999999999999999999999999873 258999997644
Q ss_pred CCCCHHHHhcCCCC---------------CC------------cccCCCCHHHHHHHHHHcCCc-hHHhcCCCCccccCC
Q 000711 525 AVGTLRDQLIYPLT---------------SD------------QEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWG 576 (1338)
Q Consensus 525 ~~~tl~eni~~~~~---------------~~------------~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g 576 (1338)
+..|+.+.+.-+.. .. .......+.++.++++.+|+. +..++.+
T Consensus 76 ~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~-------- 147 (638)
T PRK10636 76 LPQPALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGLGFSNEQLERPV-------- 147 (638)
T ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhCCCCchhhcCch--------
Confidence 44555544321100 00 000011234677788888886 4555543
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHccCCeEEEEecChhhHh-hcceEEEccC
Q 000711 577 DELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 577 ~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
.+||||||||++|||||+.+|++|||||||++||+.+..++.+.+++.+.|+|+|||+...+. .||++++|++
T Consensus 148 ~~LSgGerqRv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~~~tviivsHd~~~l~~~~d~i~~L~~ 221 (638)
T PRK10636 148 SDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQ 221 (638)
T ss_pred hhcCHHHHHHHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHhcCEEEEEeC
Confidence 689999999999999999999999999999999999999999999988889999999999875 7899999986
No 70
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=5.3e-56 Score=570.47 Aligned_cols=462 Identities=18% Similarity=0.189 Sum_probs=312.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-cchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhH------
Q 000711 812 SFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVK------ 884 (1338)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~~-~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~------ 884 (1338)
.+..+...++..++..+...++...++++.++-+ .| + ....++..+|+ +|++.+...+...+..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~-~----~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~ 274 (694)
T TIGR03375 201 FVLKTLRSYFLDVAGKKADLILSAKLFERVLGLRMEA-R----PASVGSFANQL-REFESVRDFFTSATLTALIDLPFAL 274 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-C----CCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3444444444445555555555555555555533 33 2 22456778898 7998888766543322222
Q ss_pred -hHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHH
Q 000711 885 -PSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGARE 963 (1338)
Q Consensus 885 -~~~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e 963 (1338)
.++.+++++|.++++.. +.+++++++ .....++......+..+..+.......+...+.++|+.|+.+..+
T Consensus 275 ~~~~~l~~~~~~l~li~l----~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~ 346 (694)
T TIGR03375 275 LFLLVIAIIGGPLVWVPL----VAIPLILLP----GLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRF 346 (694)
T ss_pred HHHHHHHHHHhHHHHHHH----HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHH
Confidence 22233455666654421 111111111 112222233334444444444444455556678999999988887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHHHHHHHHHHH
Q 000711 964 KAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSF 1043 (1338)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~~~ 1043 (1338)
.+.+++.+.+..+...+..+...+...+..++.. +...+.++++....... ..+.|.+..+. .+.....
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~il~~g~~~v~~g--~ls~G~l~a~~----~~~~~~~ 415 (694)
T TIGR03375 347 QRRWEQTVAALARSGLKSRFLSNLATNFAQFIQQ-----LVSVAIVVVGVYLISDG--ELTMGGLIACV----MLSGRAL 415 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcC--CCCHHHHHHHH----HHHHHHH
Confidence 7777777766655444433333222222111111 11111122221111010 12344443333 2334556
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCC-ccccccccceE
Q 000711 1044 LAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFE 1122 (1338)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~-~~~vL~~lsf~ 1122 (1338)
.++..+......+.+...+.+|+.++.+.+++.++.. . .. +.....|.|+|+||+|+||+ .+++|+|+||+
T Consensus 416 ~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~----~--~~--~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~ 487 (694)
T TIGR03375 416 APLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGT----R--FL--HRPRLQGEIEFRNVSFAYPGQETPALDNVSLT 487 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC----C--CC--CCCCccceEEEEEEEEEeCCCCccceeeeeEE
Confidence 6778888888888999999999999876543221100 0 00 01112578999999999985 56899999999
Q ss_pred EeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCchHH
Q 000711 1123 IVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREE 1200 (1338)
Q Consensus 1123 I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~ 1200 (1338)
|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|++++ ..+|++|+||||||++|+|||||||.++.+
T Consensus 488 i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~--- 564 (694)
T TIGR03375 488 IRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAP--- 564 (694)
T ss_pred ECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCC---
Confidence 999999999999999999999999999999999999999999987 456789999999999999999999987532
Q ss_pred HHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEEe
Q 000711 1201 AELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGIL 1279 (1338)
Q Consensus 1201 ~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiL 1279 (1338)
+..|++++++++.+++.++++.+|+||||.+ ++|.+||||||||||||||++++|+|+||
T Consensus 565 -------------------~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~~p~iliL 625 (694)
T TIGR03375 565 -------------------YADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLRDPPILLL 625 (694)
T ss_pred -------------------CCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 1234556666777777788888899999998 58899999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1280 DECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1280 DEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
|||||+||+++|+.+++.+++ .++|+|+||||+++++.+|++++|++|+
T Consensus 626 DE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~ 676 (694)
T TIGR03375 626 DEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGR 676 (694)
T ss_pred eCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCE
Confidence 999999999999999887754 4899999999999999999999997763
No 71
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=6.5e-56 Score=560.31 Aligned_cols=453 Identities=17% Similarity=0.246 Sum_probs=309.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcccc-cchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHh-------HHHHHH
Q 000711 820 HLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKP-------SVDILW 891 (1338)
Q Consensus 820 ~~~~~~~~~~r~~l~~~l~~~~l~~~-~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~-------~~~i~~ 891 (1338)
++..++.......+...+++.+++.+ .+|+ ....++..+|+++|++.+...+...+..++.. ++.+++
T Consensus 87 ~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~----~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 162 (582)
T PRK11176 87 YCISWVSGKVVMTMRRRLFGHMMGMPVSFFD----KQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFY 162 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhC----CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444445555555555432 4443 22446688999999998877665444433322 222344
Q ss_pred HHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHHHHHHHHHH
Q 000711 892 FTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRF 971 (1338)
Q Consensus 892 ~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e~~~~~~~~ 971 (1338)
++|.++++.. +.+++.........++......+.++..+.......+...+.++++.|+.++.+.+.+++..
T Consensus 163 ~~~~l~l~~l--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~ 234 (582)
T PRK11176 163 YSWQLSLILI--------VIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVS 234 (582)
T ss_pred HHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHH
Confidence 5666544321 11111111122222233333344444444444444555567889999999888888777777
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHh--hcccchhhhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 972 RELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAME--HKGDRALVSTQGELAHALRFLASVVSQSFLAFGDI 1049 (1338)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~ 1049 (1338)
++..+...+..+...+......++... ...+.++++.. ..+. .+.|.+..+.. .....+.++..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~g~~~~~~g~----is~g~~~~~~~----~~~~~~~pl~~l 301 (582)
T PRK11176 235 NRMRQQGMKMVSASSISDPIIQLIASL-----ALAFVLYAASFPSVMDT----LTAGTITVVFS----SMIALMRPLKSL 301 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHcCC----CCHHHHHHHHH----HHHHHHHHHHHH
Confidence 776665554444333333222222111 11111111111 1111 13344433322 233455677888
Q ss_pred HHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCC-ccccccccceEEeCCCE
Q 000711 1050 LELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEIVPGKS 1128 (1338)
Q Consensus 1050 ~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~-~~~vL~~lsf~I~~Gek 1128 (1338)
......+.....+.+|+.++.+.+++.+.. . ...+. ..+.|+|+||+|.||+ .+++|+|+||+|+|||+
T Consensus 302 ~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~------~--~~~~~--~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~ 371 (582)
T PRK11176 302 TNVNAQFQRGMAACQTLFAILDLEQEKDEG------K--RVIER--AKGDIEFRNVTFTYPGKEVPALRNINFKIPAGKT 371 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcCCCC------C--cCCCC--CCCeEEEEEEEEecCCCCCccccCceEEeCCCCE
Confidence 888888888888999999887543221110 0 01111 2467999999999986 47899999999999999
Q ss_pred EEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHH
Q 000711 1129 LLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRAL 1206 (1338)
Q Consensus 1129 vaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~ 1206 (1338)
+||||+||||||||+++|+|+|+|++|+|.+||+|++++ ..+|++|+||||||++|+|||||||.++.+.
T Consensus 372 ~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~-------- 443 (582)
T PRK11176 372 VALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTE-------- 443 (582)
T ss_pred EEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCC--------
Confidence 999999999999999999999999999999999999987 3556789999999999999999999875321
Q ss_pred hhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCC
Q 000711 1207 KLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNA 1285 (1338)
Q Consensus 1207 ~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSa 1285 (1338)
+..|++++++++.+++.++++++|+||||.+ ++|.+||||||||||||||++++|+||||||||||
T Consensus 444 -------------~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEptsa 510 (582)
T PRK11176 444 -------------QYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSA 510 (582)
T ss_pred -------------CCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECcccc
Confidence 1235667777788888888999999999997 57889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1286 TSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1286 LD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
||.++|+.+.+.++. .++|+|+||||+++++.+|++++|++|+
T Consensus 511 LD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~ 555 (582)
T PRK11176 511 LDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGE 555 (582)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCE
Confidence 999999998877654 5899999999999999999999997764
No 72
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=9.8e-55 Score=543.40 Aligned_cols=506 Identities=17% Similarity=0.204 Sum_probs=365.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh-cChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAFL-RRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHT 185 (1338)
Q Consensus 107 l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~R~~lt~~l~~ 185 (1338)
++..+++.++...+.+..|...+.++|.+.. .+...++. ++++.+++.++..+..|+..++..+.-..+..+++.
T Consensus 8 ~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 83 (544)
T TIGR01842 8 FIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLM----LTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQ 83 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556667777778888999999999987763 33322222 222222233334455666666666666668888999
Q ss_pred HHhcccccccccccCCCCCCchhHHHccHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Q 000711 186 RYFENMAYYKISHVDGRITHPEQRLASDVPRFCSELSE-LVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTM 264 (1338)
Q Consensus 186 ~~~~~~~~~~~~~~d~~~~n~~qRit~Di~~~~~~~~~-l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~~ 264 (1338)
+++++..+.+++. .++...++++|++.+.+.+.. .+..++..++.. .+.. ++++++|.+++++++.+++..++
T Consensus 84 ~~~~~ll~~~~~~----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~-~~~~-~l~~~~~~l~li~l~~~~l~~~i 157 (544)
T TIGR01842 84 PIFAASFSATLRR----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMP-IYLL-VCFLLHPWIGILALGGAVVLVGL 157 (544)
T ss_pred HHHHHHhcCcccC----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHHH-HHHHHhhHHHHHHHHHHHHHHHH
Confidence 9999988888642 245578999999998776655 333333333322 2222 34566888877766555544444
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 265 MRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKY 344 (1338)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (1338)
..++.+...+...+.++..++......+..+++++||.|+.|+.+.+++.+.+++..+...+..+..........++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 235 (544)
T TIGR01842 158 ALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFR-- 235 (544)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 444556666666666677777777777878899999999999999988888777766554433222222222111111
Q ss_pred HHHHHHHHHHHHhHhccccc-CCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 000711 345 LGATVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISREL 423 (1338)
Q Consensus 345 ~~~~~~~~~~~~~~~~g~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~~~~~~~ 423 (1338)
......+++ +++.+. .+..+.|.. ++. ..++..++.++..+...+..+++...+.+|+.++++.+++.
T Consensus 236 -~~~~~~~~~----~g~~l~~~g~it~g~l--~a~----~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~ 304 (544)
T TIGR01842 236 -IVLQSLVLG----LGAYLAIDGEITPGMM--IAG----SILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSR 304 (544)
T ss_pred -HHHHHHHHH----HHHHHHHcCCCCHHHH--HHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 111111111 112111 223355543 222 23445566788888889999999999999999998765432
Q ss_pred cccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEE
Q 000711 424 SIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHI 502 (1338)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i 502 (1338)
.. .. . .....+.++++||+|.||++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|
T Consensus 305 ~~-~~--~------~~~~~~~i~~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i 375 (544)
T TIGR01842 305 DP-AM--P------LPEPEGHLSVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSV 375 (544)
T ss_pred cC-CC--C------CCCCCCeEEEEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE
Confidence 11 00 0 01123569999999999864 689999999999999999999999999999999999999999999
Q ss_pred EeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---
Q 000711 503 AKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI--- 573 (1338)
Q Consensus 503 ~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~--- 573 (1338)
.++|.+ ..+++.++||||+|++|++|++|||.++.+ ..+++++.++++.++++++++++|.+.++
T Consensus 376 ~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~------~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~ 449 (544)
T TIGR01842 376 RLDGADLKQWDRETFGKHIGYLPQDVELFPGTVAENIARFGE------NADPEKIIEAAKLAGVHELILRLPDGYDTVIG 449 (544)
T ss_pred EECCEehhhCCHHHHhhheEEecCCcccccccHHHHHhccCC------CCCHHHHHHHHHHhChHHHHHhCccccccccC
Confidence 999965 235678999999999999999999987542 25678999999999999999999875443
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 574 NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 574 ~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
++|.+||||||||++||||++++|+++|||||||+||+++++.+.+.+++ .++|+|+||||++.+..+|+|++|+++
T Consensus 450 ~~g~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G 529 (544)
T TIGR01842 450 PGGATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDG 529 (544)
T ss_pred CCcCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECC
Confidence 46889999999999999999999999999999999999999999998865 379999999999999999999999863
No 73
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1e-57 Score=499.86 Aligned_cols=199 Identities=27% Similarity=0.381 Sum_probs=162.8
Q ss_pred CcEEEEeEEEEcC--C-CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCC------
Q 000711 443 NYIEFSGVKVVTP--T-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVG------ 508 (1338)
Q Consensus 443 ~~i~~~~v~~~~~--~-~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~------ 508 (1338)
..++++|+++.+. + ...+++++||+|++||.++|||+||||||-..+.++|+++. -+|+|.++|.+
T Consensus 5 ~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se 84 (534)
T COG4172 5 PLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASE 84 (534)
T ss_pred cceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCH
Confidence 4588899887553 2 35899999999999999999999999999999999999975 47899999976
Q ss_pred cc---cc-ccEEEEecCCCC---CCCCHHHHhcCCCCCCc-ccCCCCHHHHHHHHHHcCCch---HHhcCCCCccccCCC
Q 000711 509 SD---LN-KEIFYVPQRPYT---AVGTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEY---LLDRYPPEKEINWGD 577 (1338)
Q Consensus 509 ~~---~~-~~i~~v~Q~~~l---~~~tl~eni~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~~~~~~g~ 577 (1338)
.+ +| .+|++++|+|.. |--||..+|.-+..... .......+++.++|+.+|+.+ .++.+| .
T Consensus 85 ~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p~~rl~~yP--------H 156 (534)
T COG4172 85 RQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEPEKRLDAYP--------H 156 (534)
T ss_pred HHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCchhhhhhhCC--------c
Confidence 11 22 479999999964 23477777653321111 112234578889999999965 455667 6
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 578 ELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 578 ~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
+||||||||+.||.||..+|++||.||||.|||.....+|.+.+++ .|+.+++||||+..++ ++|+|++|..
T Consensus 157 eLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~ 233 (534)
T COG4172 157 ELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQH 233 (534)
T ss_pred ccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEec
Confidence 8999999999999999999999999999999999999999998864 5999999999999986 7999999986
No 74
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.3e-55 Score=550.83 Aligned_cols=462 Identities=17% Similarity=0.186 Sum_probs=310.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHh
Q 000711 807 QSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKP 885 (1338)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~-~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~ 885 (1338)
..++..+..+...++..++..+...++..++++++++. ..||+. ...++..+|+++|++.+...+...+..++..
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~----~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~ 128 (529)
T TIGR02857 53 AVLLRALLGWLGERAAARAAAAVKSQLRERLLAAVAALGPGWLQG----RPSGELATLALEGVEALDGYFARYLPQLVLA 128 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhcc----CChHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 33334444455555555555555556666666666654 356652 3456788999999999887665433333222
Q ss_pred -------HHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcC
Q 000711 886 -------SVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFG 958 (1338)
Q Consensus 886 -------~~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~ 958 (1338)
++.+++++|.++++.. +..+ +...+.....+.......+.++..+.......+...+.++|+.|+
T Consensus 129 ~~~~~~~~~~l~~~~~~l~~~~l-----~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~ 200 (529)
T TIGR02857 129 VIIPLAILAAVFPADWISGLILL-----LTAP---LIPIFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFG 200 (529)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHH-----HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHcc
Confidence 2223445665544321 1111 111111111122222233333333444444455556789999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHh-hcccchhhhchHHHHHHHHHHHH
Q 000711 959 GGAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAME-HKGDRALVSTQGELAHALRFLAS 1037 (1338)
Q Consensus 959 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~l~~~l~~~~~ 1037 (1338)
.++.+.+.+++..++..+......+...+......++..... ....++.+.. ..+. .+.|.+..+. .
T Consensus 201 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~----~t~g~~~~~~----~ 268 (529)
T TIGR02857 201 RAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSV----ALVAVYIGFRLLAGD----LDLATGLFVL----L 268 (529)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHcCC----CCHHHHHHHH----H
Confidence 988887777666666555444333333222222222111110 0111111111 1111 1233333222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCCc-cccc
Q 000711 1038 VVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQ-KLLA 1116 (1338)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~~-~~vL 1116 (1338)
+......++..+......+.....+.+|+.++.+.+++.. ... +...+. .+.|+|+||+|.||+. +++|
T Consensus 269 ~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~-----~~~--~~~~~~---~~~i~~~~v~f~y~~~~~~il 338 (529)
T TIGR02857 269 LAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLA-----GKA--PVTAAP---APSLEFSGLSVAYPGRRAPAL 338 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccC-----CCc--CCCCCC---CCeEEEEEEEEECCCCCcccc
Confidence 3345566777777788888888899999999875321110 000 001111 3689999999999874 5899
Q ss_pred cccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcC
Q 000711 1117 RQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIY 1194 (1338)
Q Consensus 1117 ~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~ 1194 (1338)
+|+||+|+|||++|||||||||||||+++|.|+|+|++|+|.+||.|++++ +.+|++++||||||++|+|||||||.+
T Consensus 339 ~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~ 418 (529)
T TIGR02857 339 RPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVPQHPFLFAGTIAENIRL 418 (529)
T ss_pred cceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEcCCCcccCcCHHHHHhc
Confidence 999999999999999999999999999999999999999999999999987 456778999999999999999999987
Q ss_pred CCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcC
Q 000711 1195 PLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHK 1273 (1338)
Q Consensus 1195 p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~ 1273 (1338)
+.+ +..|++++++++.++++++++++|+||||.+ ++|.+||||||||++||||++++
T Consensus 419 ~~~----------------------~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~ 476 (529)
T TIGR02857 419 ARP----------------------DASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRD 476 (529)
T ss_pred cCC----------------------CCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcC
Confidence 532 1134556677778888888999999999998 57899999999999999999999
Q ss_pred CCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEE
Q 000711 1274 PKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRL 1324 (1338)
Q Consensus 1274 p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l 1324 (1338)
|+|+|||||||+||.++|+.+++.+++ .++|+|+||||+++++.+|++++|
T Consensus 477 ~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 477 APLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999887754 589999999999999999999875
No 75
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.6e-56 Score=600.22 Aligned_cols=207 Identities=18% Similarity=0.260 Sum_probs=162.7
Q ss_pred ceEEeeeEEeCC---CccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCC---CCCceEEcCCCCCccccCCcc
Q 000711 1099 SISFSKLDIITP---SQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP---VVSGSLTKPSQHIDEEAGSGC 1172 (1338)
Q Consensus 1099 ~I~f~nV~f~yp---~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~---~~sG~I~idg~dI~~~~~lr~ 1172 (1338)
.++++||++.|+ +.+++|+|+|++|+|||.+||+||||||||||+++|.|+.+ +++|+|.+||.+++. ..|+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~--~~~~ 836 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS--SFQR 836 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh--hhhc
Confidence 379999999875 35679999999999999999999999999999999999998 688999999998853 3456
Q ss_pred cEEEEcCCCCC-CCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCc
Q 000711 1173 GIFYVPQRPYT-CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN 1251 (1338)
Q Consensus 1173 ~i~~VpQdP~L-F~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~ 1251 (1338)
+++||||++.+ +..|+||||.+... ++. ..+ .. .+..++.+.++++.++|.+ -.|+.++
T Consensus 837 ~i~yv~Q~~~~~~~~Tv~E~L~~~a~--------l~~--~~~-~~--~~~~~~~v~~~l~~l~L~~-------~~d~~v~ 896 (1394)
T TIGR00956 837 SIGYVQQQDLHLPTSTVRESLRFSAY--------LRQ--PKS-VS--KSEKMEYVEEVIKLLEMES-------YADAVVG 896 (1394)
T ss_pred ceeeecccccCCCCCCHHHHHHHHHH--------hCC--CCC-CC--HHHHHHHHHHHHHHcCChh-------hCCCeeC
Confidence 79999999764 56799999975210 000 000 00 0001234566777777743 2455553
Q ss_pred -ccCCCChhHHHHHHHHHHhhcCCC-EEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc--ccccceEEE
Q 000711 1252 -WEDILSLGEQQRLGMARLFFHKPK-FGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI--PFHSLELRL 1324 (1338)
Q Consensus 1252 -~g~~LSgGQrQrlaiARAlLr~p~-ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i--~~~d~~l~l 1324 (1338)
.+..||||||||++|||||+++|+ ||+||||||+||..+...+.+++++ .|+|||+++|+++.. +..|+++.|
T Consensus 897 ~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L 976 (1394)
T TIGR00956 897 VPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLL 976 (1394)
T ss_pred CCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEE
Confidence 345799999999999999999997 9999999999999999988877643 589999999999853 678999999
Q ss_pred ecC
Q 000711 1325 IDG 1327 (1338)
Q Consensus 1325 ~~g 1327 (1338)
.+|
T Consensus 977 ~~G 979 (1394)
T TIGR00956 977 QKG 979 (1394)
T ss_pred cCC
Confidence 765
No 76
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=2.4e-55 Score=554.70 Aligned_cols=467 Identities=16% Similarity=0.222 Sum_probs=324.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-cchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHhH
Q 000711 808 SAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPS 886 (1338)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~~-~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~~ 886 (1338)
.++..+..+...++..+...+....+...+++++++.+ .+|+. ...++..+|++.|++.+...+...+..++..+
T Consensus 64 ~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~~~~~~~~~~----~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~ 139 (571)
T TIGR02203 64 AVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLLGLPVSFFDR----QPTGTLLSRITFDSEQVASAATDAFIVLVRET 139 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC----CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444455555555555556666666666543 45542 23466789999999999887765544444332
Q ss_pred -------HHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCC
Q 000711 887 -------VDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGG 959 (1338)
Q Consensus 887 -------~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~ 959 (1338)
+.+++++|.++++. ++..++...+.....++......+.++.++.......+...+.++++.++.
T Consensus 140 ~~~~~~~~~l~~~~~~l~~i~--------l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~ 211 (571)
T TIGR02203 140 LTVIGLFIVLLYYSWQLTLIV--------VVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGG 211 (571)
T ss_pred HHHHHHHHHHHHHhHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcc
Confidence 22344556554432 111111122222222333444455555555566666677778899999998
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHHHHHHH
Q 000711 960 GAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVV 1039 (1338)
Q Consensus 960 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~ 1039 (1338)
+......+++.+++..+......+...+...+...+... ...+.++++....... ..+.|.+..+.. +.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~~g--~lt~g~l~a~~~----~~ 280 (571)
T TIGR02203 212 QAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASL-----ALAVVLFIALFQAQAG--SLTAGDFTAFIT----AM 280 (571)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHcC--CCCHhHHHHHHH----HH
Confidence 887777777766666655444444333333222222111 1111111111110000 113444443332 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCC-ccccccc
Q 000711 1040 SQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQ 1118 (1338)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~-~~~vL~~ 1118 (1338)
.....++..+......+.+...+.+|+.++.+.+++.+.. . ...+ ...+.|+|+||+|+||+ ++++|+|
T Consensus 281 ~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~----~----~~~~--~~~~~i~~~~v~f~y~~~~~~il~~ 350 (571)
T TIGR02203 281 IALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG----T----RAIE--RARGDVEFRNVTFRYPGRDRPALDS 350 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC----C----CCCC--CCCCeEEEEEEEEEcCCCCCccccC
Confidence 4566788888888888999999999999987543221110 0 0011 12468999999999976 5789999
Q ss_pred cceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCC
Q 000711 1119 LTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPL 1196 (1338)
Q Consensus 1119 lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~ 1196 (1338)
+||+|+|||+++|||+||||||||+++|.|+|+|++|+|.+||+|++++ +.+|++++||||+|++|+|||||||.++.
T Consensus 351 inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~ 430 (571)
T TIGR02203 351 ISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGR 430 (571)
T ss_pred eeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999987 45677899999999999999999998763
Q ss_pred chHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCC
Q 000711 1197 SREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPK 1275 (1338)
Q Consensus 1197 ~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ 1275 (1338)
.. +..|++++++++.+++++++.++|+||||.+ ++|.+||||||||||||||++++|+
T Consensus 431 ~~---------------------~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~ 489 (571)
T TIGR02203 431 TE---------------------QADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAP 489 (571)
T ss_pred CC---------------------CCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 20 1245667788888899999999999999998 5789999999999999999999999
Q ss_pred EEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1276 FGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1276 ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
|++||||||+||.++|+.+.+.++. .++|+|+|+||++.++.+|+++++++|+
T Consensus 490 illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~ 544 (571)
T TIGR02203 490 ILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGR 544 (571)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCE
Confidence 9999999999999999999887654 5899999999999999999999997653
No 77
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-54 Score=506.37 Aligned_cols=476 Identities=19% Similarity=0.244 Sum_probs=324.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-cchhhcccCCCCCCccchhHHHHHHHHHHHHH-
Q 000711 800 LIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSG- 877 (1338)
Q Consensus 800 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~~-~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~- 877 (1338)
.++..++..+...++.+....+..+.+...+..+...++++..+.. .|-+ ....++..+.+++-++.+...+..
T Consensus 42 ~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~----~~~~g~~atl~~egve~l~~Y~~ry 117 (559)
T COG4988 42 LLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIA----QKPAGSAATLALEGIEQLEPYYARY 117 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhc----CCCcchHHHHHHHHHHHHHHHHHHH
Confidence 3344444445556666666666667777777777777777655432 2221 122345567777778877655444
Q ss_pred ---HHHHhhHhH---HHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHH-HHhccchHHHHHHHHhh
Q 000711 878 ---LVTGMVKPS---VDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSRE-QQLEGTFRFMHERLRAH 950 (1338)
Q Consensus 878 ---~~~~~i~~~---~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~le~~~r~~~~~~~~~ 950 (1338)
.+..++.|+ +.++|++|.-+++.....+.+.+++++++ +. -.+.++++ ..+.....+.+.++ .+
T Consensus 118 LPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg-----~~---a~~~s~~~~~~~~~ls~~FLD~L-rG 188 (559)
T COG4988 118 LPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVG-----LA---AKDASEKQFSALARLSGHFLDRL-RG 188 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH-----HH---HhHHHHHHHHHHHHHHHHHHHHh-cC
Confidence 344444443 34467888877654221111111111111 11 11111111 11111112233333 36
Q ss_pred HHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHH
Q 000711 951 AESVAFFGGGAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAH 1030 (1338)
Q Consensus 951 ~e~i~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~ 1030 (1338)
.+++++|+..+...+.+.+.-++..+..+...+...+.....++++......++ +..+....+.+.+ .+..
T Consensus 189 L~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvA----v~~g~~ll~~G~l-----tl~~ 259 (559)
T COG4988 189 LETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVA----VYIGFRLLGEGDL-----TLFA 259 (559)
T ss_pred hHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHccCCc-----cHHH
Confidence 789999998887777777666666666666666666666666666532222111 1122222110000 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCC
Q 000711 1031 ALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITP 1110 (1338)
Q Consensus 1031 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp 1110 (1338)
++ ++....-..+.|+.++...++.-....++.+.++.+.+.+....+.. ......|. .+.+|+++|++|.||
T Consensus 260 ~l-~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~----~~~~~~~~---~~~ei~~~~l~~~y~ 331 (559)
T COG4988 260 GL-FVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSG----EKAEVANE---PPIEISLENLSFRYP 331 (559)
T ss_pred HH-HHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCc----cccccccC---CCceeeecceEEecC
Confidence 11 12223456778999999888887777888999999876443211110 00011221 134566679999999
Q ss_pred CccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCH
Q 000711 1111 SQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTL 1188 (1338)
Q Consensus 1111 ~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTI 1188 (1338)
+++++++|+||+++||+++||||+||||||||+++|.||.+|++|+|.+||+|++++ ..+|+++++|||+||+|.|||
T Consensus 332 ~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTi 411 (559)
T COG4988 332 DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTI 411 (559)
T ss_pred CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccH
Confidence 988999999999999999999999999999999999999999999999999999998 356779999999999999999
Q ss_pred HHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHH
Q 000711 1189 RDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMA 1267 (1338)
Q Consensus 1189 ReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiA 1267 (1338)
||||.+... +..|+++.++++.++|.++++. |+|+||.+ +.|.+|||||+||+++|
T Consensus 412 reNi~l~~~----------------------~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLA 468 (559)
T COG4988 412 RENILLARP----------------------DASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALA 468 (559)
T ss_pred HHHhhccCC----------------------cCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHH
Confidence 999976432 2246667778888888889988 99999998 57899999999999999
Q ss_pred HHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1268 RLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1268 RAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
||+++++++++||||||+||.|+|+.|.+.+.+ +++|||+|+||+..+.-.|+++++++|+
T Consensus 469 RAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~ 531 (559)
T COG4988 469 RALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGR 531 (559)
T ss_pred HHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCc
Confidence 999999999999999999999999998887654 5899999999999999999999997553
No 78
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=2.1e-55 Score=555.60 Aligned_cols=189 Identities=21% Similarity=0.222 Sum_probs=151.5
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEc
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~Vp 1178 (1338)
.|+++||++.|++ +++|+|+||+|++|+++||+||||||||||+++|.|+++|++|+|.+ |.+ .+|+|+|
T Consensus 319 ~l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~--------~~i~y~~ 388 (635)
T PRK11147 319 VFEMENVNYQIDG-KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTK--------LEVAYFD 388 (635)
T ss_pred eEEEeeeEEEECC-eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCC--------cEEEEEe
Confidence 5899999999864 56999999999999999999999999999999999999999999998 432 2599999
Q ss_pred CCC-CCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchh-hhhhhcccCcccCcccCC
Q 000711 1179 QRP-YTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY-LLEREEVGWDANLNWEDI 1255 (1338)
Q Consensus 1179 QdP-~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~-~i~~~~~Gldt~~~~g~~ 1255 (1338)
|++ .+++ -|+.+|+.++.... . ....+..+.++++.+++.. .. +.. ...
T Consensus 389 q~~~~l~~~~tv~e~l~~~~~~~----------~--------~~~~~~~~~~~l~~~~l~~~~~-------~~~---~~~ 440 (635)
T PRK11147 389 QHRAELDPEKTVMDNLAEGKQEV----------M--------VNGRPRHVLGYLQDFLFHPKRA-------MTP---VKA 440 (635)
T ss_pred CcccccCCCCCHHHHHHhhcccc----------c--------ccchHHHHHHHHHhcCCCHHHH-------hCh---hhh
Confidence 987 4655 49999996532100 0 0001223455566555521 11 111 246
Q ss_pred CChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHhcCCeEEEeccCCCCc-ccccceEEEe
Q 000711 1256 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALI-PFHSLELRLI 1325 (1338)
Q Consensus 1256 LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~~~~TvI~IAHRl~~i-~~~d~~l~l~ 1325 (1338)
||||||||++||||++++|++|||||||++||.++.+.+.++++..+.|||+|+|+...+ .++|+++.+.
T Consensus 441 LSgGekqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vSHd~~~~~~~~d~i~~l~ 511 (635)
T PRK11147 441 LSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSYQGTVLLVSHDRQFVDNTVTECWIFE 511 (635)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHhcCEEEEEe
Confidence 999999999999999999999999999999999999999988877677999999999865 5799999995
No 79
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.8e-55 Score=553.54 Aligned_cols=459 Identities=18% Similarity=0.211 Sum_probs=306.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-cchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHhH----
Q 000711 812 SFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPS---- 886 (1338)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~~-~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~~---- 886 (1338)
.+..+...++..+...+...++..++++++++.+ .||+. ...++..+|+++|++.+...+...+..++..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~----~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~ 154 (592)
T PRK10790 79 AGLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSAFDT----QPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIG 154 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC----CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444455555555566666666666643 56652 24467889999999999877665544433322
Q ss_pred ---HHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHH
Q 000711 887 ---VDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGARE 963 (1338)
Q Consensus 887 ---~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e 963 (1338)
+.+++++|.+.++.. ++.+.+++....... .......+.++..+.......+...+.++++.|+.++..
T Consensus 155 ~~~~~~~~~~~~l~li~l-----~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~ 226 (592)
T PRK10790 155 AMLVAMFSLDWRMALVAI-----MIFPAVLVVMVIYQR---YSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARF 226 (592)
T ss_pred HHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHH
Confidence 222334555543321 010111111111111 111222222222223333344555677899999877666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHHHHHHHHHH
Q 000711 964 KAMIESRFRELLEHSLLLLKKKWL-FGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQS 1042 (1338)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~~ 1042 (1338)
.+.+.+..++..+......+...+ ......++.. .+..++.++++....+. .+.|.+..+. .+....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~----is~g~l~a~~----~~~~~~ 294 (592)
T PRK10790 227 GERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSA----LILCGLLMLFGFSASGT----IEVGVLYAFI----SYLGRL 294 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCC----cCHHHHHHHH----HHHHHH
Confidence 555555544444333222222111 1111111111 11111111111111111 1233333322 233455
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCCccccccccceE
Q 000711 1043 FLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFE 1122 (1338)
Q Consensus 1043 ~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~~~~vL~~lsf~ 1122 (1338)
..++..+......+.+...+.+|+.++.+.+++... . ...++ ..+.|+|+||+|+||+++++|+|+||+
T Consensus 295 ~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~------~--~~~~~---~~~~i~~~~v~f~y~~~~~il~~i~l~ 363 (592)
T PRK10790 295 NEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYG------N--DDRPL---QSGRIDIDNVSFAYRDDNLVLQNINLS 363 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC------C--CccCC---CCCeEEEEEEEEEeCCCCceeeceeEE
Confidence 667788888888888889999999998754321100 0 01111 146899999999998777899999999
Q ss_pred EeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCchHH
Q 000711 1123 IVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREE 1200 (1338)
Q Consensus 1123 I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~ 1200 (1338)
|+|||++||||+||||||||+++|.|+|+|++|+|.+||.|++++ ..+|++|+||||||+||+||||+||.++.+
T Consensus 364 i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~--- 440 (592)
T PRK10790 364 VPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRD--- 440 (592)
T ss_pred EcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCC---
Confidence 999999999999999999999999999999999999999999987 466789999999999999999999987532
Q ss_pred HHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEEe
Q 000711 1201 AELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGIL 1279 (1338)
Q Consensus 1201 ~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiL 1279 (1338)
..|++++++++.++++++++++|+||||.+ +.|.+||||||||||||||++++|+||||
T Consensus 441 --------------------~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~illl 500 (592)
T PRK10790 441 --------------------ISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQILIL 500 (592)
T ss_pred --------------------CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 135567777888888889999999999998 57889999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1280 DECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1280 DEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
|||||+||.++|+.+.+.++. .++|+|+||||+++++.+|++++|++|+
T Consensus 501 DEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 501 DEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQ 551 (592)
T ss_pred eCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCE
Confidence 999999999999999887754 4899999999999999999999998765
No 80
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.9e-55 Score=500.12 Aligned_cols=422 Identities=20% Similarity=0.226 Sum_probs=279.1
Q ss_pred CCCCccchhHHHHHHHHHHHHHHHHHhhHhHHH-------HHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCcccc
Q 000711 856 KSIDADQRITHDLEKLTTDLSGLVTGMVKPSVD-------ILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGD 928 (1338)
Q Consensus 856 ~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~~~~-------i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (1338)
+.+|..+|+..|++.++....-++...+..++. +-+++|.+++..+. .+.+..+++...+++.- ..
T Consensus 113 r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~~---~ll~~lli~P~~~~~~~----~~ 185 (573)
T COG4987 113 RSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLGL---ILLLLLLIIPTLFYRAG----RK 185 (573)
T ss_pred ChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHH---HHHHHHHHHHHHHHHhh----hh
Confidence 356789999999999998766555444332222 23456655544321 11111111222222221 12
Q ss_pred ccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHH
Q 000711 929 LTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLS 1008 (1338)
Q Consensus 929 ~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1338)
...+.+...+.++........+......||.++..+..++..-....+..++..+...+... +...+......+..
T Consensus 186 ~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~~a----~~~l~~g~~v~~~l 261 (573)
T COG4987 186 FGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLSDA----ILLLIAGLLVIGLL 261 (573)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence 23333444444554444444444456677766655555444333333333332222222222 11111112222233
Q ss_pred HHHHHhhcccchhhhchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCc
Q 000711 1009 LLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDIL-ELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSS 1087 (1338)
Q Consensus 1009 ~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~ 1087 (1338)
+|.+.....+.. ..+ ......++ +...+.+|..+. .++....+...|+.|+.++.+.+++...+
T Consensus 262 ~w~a~~~~~G~~--~~~--~aa~~ll~---~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~~~-------- 326 (573)
T COG4987 262 LWMAAQVGAGAL--AQP--GAALALLV---IFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKPEVTFP-------- 326 (573)
T ss_pred HHHHhcCcCCCc--chh--HHHHHHHH---HHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCcccCCC--------
Confidence 444432211110 001 11111111 112222333333 44455566667778877765443332211
Q ss_pred cCCCCCCCCCCceEEeeeEEeCCCc-cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcc
Q 000711 1088 QHKWNSTDYQDSISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE 1166 (1338)
Q Consensus 1088 ~~~wp~~~~~g~I~f~nV~f~yp~~-~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~ 1166 (1338)
.+.-|.. ...++++||+|.||+. +++|+|+||++++||||||+|||||||||++++|.|-|+|++|+|..+|.++..
T Consensus 327 ~~~~~~~--~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~ 404 (573)
T COG4987 327 DEQTATT--GQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIAS 404 (573)
T ss_pred ccccCCc--cceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChhh
Confidence 0011111 1279999999999985 589999999999999999999999999999999999999999999999999999
Q ss_pred ccC--CcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcc
Q 000711 1167 EAG--SGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEV 1244 (1338)
Q Consensus 1167 ~~~--lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~ 1244 (1338)
++. +|..|++++|+++||+||||+||.... ++.+|++++++++.|+|.++++..|+
T Consensus 405 l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~----------------------~~AsDEel~~aL~qvgL~~l~~~~p~ 462 (573)
T COG4987 405 LDEQALRETISVLTQRVHLFSGTLRDNLRLAN----------------------PDASDEELWAALQQVGLEKLLESAPD 462 (573)
T ss_pred CChhhHHHHHhhhccchHHHHHHHHHHHhhcC----------------------CCCCHHHHHHHHHHcCHHHHHHhChh
Confidence 854 688899999999999999999996432 33468889999999999999999999
Q ss_pred cCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccce
Q 000711 1245 GWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLE 1321 (1338)
Q Consensus 1245 Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~ 1321 (1338)
||+|.+ +.|.+|||||||||||||++|++.++++|||||.+||++||+.+.+.+.+ .|+|+|+|+||+..++..|++
T Consensus 463 gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drI 542 (573)
T COG4987 463 GLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRI 542 (573)
T ss_pred hhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEE
Confidence 999998 57899999999999999999999999999999999999999998877643 699999999999999999999
Q ss_pred EEEecC
Q 000711 1322 LRLIDG 1327 (1338)
Q Consensus 1322 l~l~~g 1327 (1338)
+++++|
T Consensus 543 ivl~~G 548 (573)
T COG4987 543 IVLDNG 548 (573)
T ss_pred EEEECC
Confidence 999877
No 81
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=9.5e-55 Score=549.03 Aligned_cols=459 Identities=18% Similarity=0.215 Sum_probs=306.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-cchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHhH-------
Q 000711 815 APSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPS------- 886 (1338)
Q Consensus 815 ~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~~-~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~~------- 886 (1338)
.+....+..++..+++.++...+++.+++.+ .+|+- ...++..+|+++|++.+...+...+..++..+
T Consensus 73 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~----~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (588)
T PRK13657 73 GVLVARHADRLAHRRRLAVLTEYFERIIQLPLAWHSQ----RGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLL 148 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHCc----CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444555666666666667777666643 55542 23466789999999988755444433332221
Q ss_pred HHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHHHHH
Q 000711 887 VDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAM 966 (1338)
Q Consensus 887 ~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e~~~ 966 (1338)
+.+++.+|.++++. ++++ ++...+.....+.......+.++..+.+.....+...+.+.++.|+.++.+.+.
T Consensus 149 ~~~~~~~~~l~l~~----l~~~----~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~ 220 (588)
T PRK13657 149 PLALFMNWRLSLVL----VVLG----IVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQA 220 (588)
T ss_pred HHHHHHHHHHHHHH----HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHH
Confidence 12234455554332 1111 111111122222222223333333344444445555677899999988887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHh--hcccchhhhchHHHHHHHHHHHHHHHHHHH
Q 000711 967 IESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAME--HKGDRALVSTQGELAHALRFLASVVSQSFL 1044 (1338)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~l~~~l~~~~~~~~~~~~ 1044 (1338)
+.+.+++..+......+...+......++.. +...+.++++.. ..+. .+.|.+..++.+ +.....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~v~~g~----lt~g~~~a~~~l----~~~~~~ 287 (588)
T PRK13657 221 LRDIADNLLAAQMPVLSWWALASVLNRAAST-----ITMLAILVLGAALVQKGQ----LRVGEVVAFVGF----ATLLIG 287 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcCC----cCHHHHHHHHHH----HHHHHH
Confidence 7766666655443333322222222111111 111111112111 1111 234444433322 334555
Q ss_pred HHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCCccccccccceEEe
Q 000711 1045 AFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEIV 1124 (1338)
Q Consensus 1045 ~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~~~~vL~~lsf~I~ 1124 (1338)
++..+......+.....+++|+.++.+.+++.++ .. . ...++ ...+.|+|+||+|.||+.+++|+|+||+|+
T Consensus 288 ~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~---~~-~--~~~~~--~~~~~I~~~~vsf~y~~~~~iL~~inl~i~ 359 (588)
T PRK13657 288 RLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRD---PP-G--AIDLG--RVKGAVEFDDVSFSYDNSRQGVEDVSFEAK 359 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC---CC-C--CCCcC--CCCCeEEEEEEEEEeCCCCceecceeEEEC
Confidence 6667777766676666777787776543221110 00 0 00111 124689999999999876789999999999
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHH
Q 000711 1125 PGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAE 1202 (1338)
Q Consensus 1125 ~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~ 1202 (1338)
|||+++|||+||||||||+++|.|+|+|.+|+|.+||.|++++ ..+|++|+||||||+||+|||||||.++.+
T Consensus 360 ~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~----- 434 (588)
T PRK13657 360 PGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRP----- 434 (588)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCC-----
Confidence 9999999999999999999999999999999999999999988 356778999999999999999999987532
Q ss_pred HHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEEeec
Q 000711 1203 LRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDE 1281 (1338)
Q Consensus 1203 ~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDE 1281 (1338)
+..|++++++++.+++.++++++|+|+||.+ ++|.+||||||||||||||++++|+|+||||
T Consensus 435 -----------------~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~iliLDE 497 (588)
T PRK13657 435 -----------------DATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILILDE 497 (588)
T ss_pred -----------------CCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 1235566777778888888899999999987 5788999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1282 CTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1282 ATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
|||+||.++|+.+.+.++. .++|+|+||||+++++.+|++++|++|+
T Consensus 498 pts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~ 546 (588)
T PRK13657 498 ATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGR 546 (588)
T ss_pred CccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCE
Confidence 9999999999999887654 4899999999999999999999997764
No 82
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-56 Score=496.41 Aligned_cols=526 Identities=19% Similarity=0.258 Sum_probs=343.3
Q ss_pred HHHHHHHHHHhcccCc-hhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHH--HHH
Q 000711 86 KSLQVLAAILLSEMGK-MGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLST--MHS 162 (1338)
Q Consensus 86 ~~l~~l~~~~~p~~~~-~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 162 (1338)
+.++.+..++.|.+.. .+-..+..++ +.++.-.+.+.+|.+.+...+.+..-+. .-+..+..++++.++--. -+.
T Consensus 196 rk~~~~~~ylwp~~~~alql~v~~cl~-ll~i~rli~~~~pi~~k~iv~~ltap~~-~~~~~~~~~v~L~flqg~gtgsG 273 (790)
T KOG0056|consen 196 RKLRTVAPYLWPTKSIALQLRVVFCLF-LLIIGRLINVSLPILSKWIVDELTAPDT-FQYSLVFLYVFLKFLQGGGTGSG 273 (790)
T ss_pred ceeEEeccccccCCCcchhHHHHHHHH-HHHHHHHHhhhhHHhHHHHHHhhcCcch-hhHHHHHHHHHHHHHhcCCcccc
Confidence 4445555666665332 1222233333 3334446788888888888888772221 112222222222111100 001
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCC-CCCCch---hHHHccHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000711 163 TSKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDG-RITHPE---QRLASDVPRFCSELSELVQDDLTAVTDGLLY 238 (1338)
Q Consensus 163 ~~~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~-~~~n~~---qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~ 238 (1338)
+..-++..+=++..+.-++.+.-+.|+|+..+.+.|+-+ +.+... .|=++-+. +.+.+..-+.+.+.-+..+++|
T Consensus 274 ~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vY 352 (790)
T KOG0056|consen 274 FLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVY 352 (790)
T ss_pred chhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhh
Confidence 122223333344445577777778888888787777643 344332 23232233 2222222222223223333222
Q ss_pred HHHHHHhchhhHHHHHHHHHHH----HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHH
Q 000711 239 TWRLCSYASPKYVFWILAYVLG----AGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQ 314 (1338)
Q Consensus 239 ~~~l~~~~~~~l~~~~l~~~~~----~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~ 314 (1338)
... ..++.+.+++++...+ ...++-|=.+.-++++ ..+.+-|.....-.-|-|+||-|++|+.|.
T Consensus 353 F~~---~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn----~~~nesrAr~vDsllNFETVKyy~Ae~yEv---- 421 (790)
T KOG0056|consen 353 FFI---KFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMN----NSWNESRARQVDSLLNFETVKYYNAEDYEV---- 421 (790)
T ss_pred hhh---hHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhh----hhhhhhhhhhhhhhhcchhhhccCchhhhH----
Confidence 111 1234444443332222 2222323222222222 122222222333334889999999999998
Q ss_pred HHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHHHHHHhHhcccc-cCCcchhhHHHHHHHHHHHHHHHHHH
Q 000711 315 QKFKALTRHMRVVLH-DH---WWFGMIQDFLLKYLGATVAVILIIEPFFAGNL-KPDTSTLGRAKMLSNLRYHTSVIISL 389 (1338)
Q Consensus 315 ~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~g~~~~~~~~~~~~~~~~~~ 389 (1338)
++|++.+..+.+..+ .. .+++..++.+. -++...+.+++ ... ..+..+.|.-. .+..+++.+
T Consensus 422 erYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii-~lgll~gsll~------aY~Vt~q~ltVGDfV------lf~TYliqL 488 (790)
T KOG0056|consen 422 ERYREAILKYQKQEWKSLASLNFLNIVQNGII-GLGLLAGSLLC------AYRVTEQTLTVGDFV------LFLTYLIQL 488 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhHHhhhhhee------eeeeeecccccccee------hHHHHHHHH
Confidence 466655544333221 11 12222222221 11111111111 111 11223444322 245678889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCCCeeeeeeeEEEe
Q 000711 390 FQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVE 469 (1338)
Q Consensus 390 ~~~l~~l~~~~~~l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~~sl~i~ 469 (1338)
++++..+...++.+|+...-.+++++++++++|..+.. .........|.|+|+||+|.|.+++|+|+|+||+++
T Consensus 489 y~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P------~a~pl~~~~G~i~fsnvtF~Y~p~k~vl~disF~v~ 562 (790)
T KOG0056|consen 489 YMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLP------GAPPLKVTQGKIEFSNVTFAYDPGKPVLSDISFTVQ 562 (790)
T ss_pred hCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCC------CCCCccccCCeEEEEEeEEecCCCCceeecceEEec
Confidence 99999999999999999999999999998877654211 111112246889999999999999999999999999
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCccc
Q 000711 470 PGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV 543 (1338)
Q Consensus 470 ~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~ 543 (1338)
||+.+++|||||+||||++|+|.++++..+|.|.+||+| .++|++||.||||..+|+.|+..||.|+.+.
T Consensus 563 pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~---- 638 (790)
T KOG0056|consen 563 PGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPS---- 638 (790)
T ss_pred CCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCC----
Confidence 999999999999999999999999999999999999987 4688999999999999999999999998764
Q ss_pred CCCCHHHHHHHHHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHH
Q 000711 544 EPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAK 620 (1338)
Q Consensus 544 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~ 620 (1338)
.+++++.++.+.+++++-+-.+|.++.+ ++|-.||||||||+|+||+++++|.|++|||+|||||..+|+.|+..
T Consensus 639 --AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaa 716 (790)
T KOG0056|consen 639 --ASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAA 716 (790)
T ss_pred --CChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHH
Confidence 5789999999999999999999988765 57889999999999999999999999999999999999999999999
Q ss_pred HHc--cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 621 VRA--MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 621 l~~--~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
+.+ .++|.|+|+||++++-+||.|++++++
T Consensus 717 L~rlca~RTtIVvAHRLSTivnAD~ILvi~~G 748 (790)
T KOG0056|consen 717 LARLCANRTTIVVAHRLSTIVNADLILVISNG 748 (790)
T ss_pred HHHHhcCCceEEEeeeehheecccEEEEEeCC
Confidence 986 599999999999999999999999873
No 83
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.5e-53 Score=566.33 Aligned_cols=199 Identities=20% Similarity=0.237 Sum_probs=171.5
Q ss_pred CcEEEEeEEEEcC-CCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-----ccccccEE
Q 000711 443 NYIEFSGVKVVTP-TGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIF 516 (1338)
Q Consensus 443 ~~i~~~~v~~~~~-~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~ 516 (1338)
..|+++||++.|+ +++++++|+||++++||+++|+||||||||||+|+|+|+.+|++|+|.++|.+ ...++.+|
T Consensus 927 ~~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~~~~~~r~~IG 1006 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIETNLDAVRQSLG 1006 (2272)
T ss_pred ceEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcchHHHHhhcEE
Confidence 3699999999996 35789999999999999999999999999999999999999999999999965 12456799
Q ss_pred EEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000711 517 YVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1338)
Q Consensus 517 ~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1338)
||||++.++. .|++||+.++...........++++.++++.++|++..++.+ .+||||||||++|||||+.
T Consensus 1007 ~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~~v~~lL~~vgL~~~~~~~~--------~~LSGGqKQRLsLArALi~ 1078 (2272)
T TIGR01257 1007 MCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEA--------QDLSGGMQRKLSVAIAFVG 1078 (2272)
T ss_pred EEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHHHc
Confidence 9999998776 599999987532111101112356788999999998877765 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 596 KPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 596 ~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
+|+++|||||||+||+.+++.+++.+++ .|+|+|++||+++.+. .+|+|++|++
T Consensus 1079 ~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~ 1135 (2272)
T TIGR01257 1079 DAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQ 1135 (2272)
T ss_pred CCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999998875 4899999999999885 7999999986
No 84
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.7e-53 Score=578.20 Aligned_cols=509 Identities=18% Similarity=0.198 Sum_probs=327.9
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhcCh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000711 111 VGIVVLRTALSNRLAKVQGFLFRAAFLRRV-PLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHTRYFE 189 (1338)
Q Consensus 111 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~R~~lt~~l~~~~~~ 189 (1338)
+++.++...+.+..+.|.....+.-..... ..++ ++.++++.++..++..+..|+....+. +..+++|+++++
T Consensus 921 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~--~~i~~~l~~~~~i~~~~~~~~~~~~~~----~~~~~L~~~l~~ 994 (1622)
T PLN03130 921 FLCYVLTEVFRVSSSTWLSEWTDQGTPKTHGPLFY--NLIYALLSFGQVLVTLLNSYWLIMSSL----YAAKRLHDAMLG 994 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 333444445555556666655553222111 1211 122222222222233333444444444 488899999999
Q ss_pred ccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH-HH
Q 000711 190 NMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTMM-RN 267 (1338)
Q Consensus 190 ~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~~~-~~ 267 (1338)
++.+.|++|||++ .++..+|+++|++.+.+.+...+..++..++..+... .++.+++| +.+++++.+++..+.+ .+
T Consensus 995 ~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~-i~i~~~~~-~~~~~~~pl~~~~~~~~~~ 1072 (1622)
T PLN03130 995 SILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTF-VLIGIVST-ISLWAIMPLLVLFYGAYLY 1072 (1622)
T ss_pred HHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 9999999999875 6799999999999988776666655555544433222 12222333 2222222111111111 11
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 268 FSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGA 347 (1338)
Q Consensus 268 ~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (1338)
..+..+++........+.......+..+++++|++|+.+++..+...+..+...+........+.|.+....++ +.
T Consensus 1073 ~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~----~~ 1148 (1622)
T PLN03130 1073 YQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETL----GG 1148 (1622)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HH
Confidence 22222222221222223333445666679999999999876654333333222221111111222332222211 11
Q ss_pred HHHHHHHHHhHhc-ccccCC---cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 000711 348 TVAVILIIEPFFA-GNLKPD---TSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISREL 423 (1338)
Q Consensus 348 ~~~~~~~~~~~~~-g~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~~~~~~~ 423 (1338)
.+.++......+. +..... ..+.|. ..++...+...+..+......++....+.+|+.++++.++|.
T Consensus 1149 ~~i~~~~~~~v~~~~~~~~~~~~~~~~G~---------~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~ 1219 (1622)
T PLN03130 1149 LMIWLTASFAVMQNGRAENQAAFASTMGL---------LLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEA 1219 (1622)
T ss_pred HHHHHHHHHHHHcccccccchhhhHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 1111110000111 111000 011221 112233334445555555667788899999999998766543
Q ss_pred cccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEE
Q 000711 424 SIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHI 502 (1338)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i 502 (1338)
+..... ......++..+.|+|+||+|.|+++ +++|+|+||+|++||+++||||||||||||+++|.|+++|++|+|
T Consensus 1220 ~~~~~~---~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I 1296 (1622)
T PLN03130 1220 PLVIEN---NRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRI 1296 (1622)
T ss_pred cccccC---CCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceE
Confidence 211000 0001112335789999999999654 579999999999999999999999999999999999999999999
Q ss_pred EeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---
Q 000711 503 AKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI--- 573 (1338)
Q Consensus 503 ~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~--- 573 (1338)
.+||.+ .++|++|++|||+|.+|+|||||||.++. ..+|++++++++.++++++++++|.+.++
T Consensus 1297 ~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-------~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vg 1369 (1622)
T PLN03130 1297 LIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-------EHNDADLWESLERAHLKDVIRRNSLGLDAEVS 1369 (1622)
T ss_pred EECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-------CCCHHHHHHHHHHcCcHHHHHhCccccCcccc
Confidence 999986 35788999999999999999999998753 25789999999999999999999876554
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 574 NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 574 ~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
+.|.+||||||||++|||||+++|+|||||||||+||.++++.|++.+++ .++|+|+||||++++..||+|++|+++
T Consensus 1370 e~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G 1448 (1622)
T PLN03130 1370 EAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAG 1448 (1622)
T ss_pred CCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECC
Confidence 46789999999999999999999999999999999999999999999986 489999999999999999999999973
No 85
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=7e-54 Score=550.29 Aligned_cols=463 Identities=16% Similarity=0.192 Sum_probs=312.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHh----
Q 000711 811 SSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKP---- 885 (1338)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~-~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~---- 885 (1338)
..+..+...++...+..+....+..++++..++. ..||+. ...++..+|+ +|++.+...+...+..++..
T Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~f~~----~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~ 266 (694)
T TIGR01846 192 EPALGGLRTYLFAHLTSRIDVELGARLYRHLLGLPLGYFES----RRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFV 266 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHcCC----CCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444555555555556666666654 356653 2346678998 69998887665433332211
Q ss_pred ---HHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHH
Q 000711 886 ---SVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAR 962 (1338)
Q Consensus 886 ---~~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~ 962 (1338)
++.+++++|.++++.. +.+++++++. ....+...+...+..+..+.......+...+.++|+.++.+..
T Consensus 267 ~~~~~~l~~~~~~l~li~l----~~~~~~~~i~----~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~ 338 (694)
T TIGR01846 267 VVFLAVMFFYSPTLTGVVI----GSLVCYALLS----VFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQ 338 (694)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHH
Confidence 2223455666654421 1111111111 1111112222233333333344444555667899999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHHHHHHHHHH
Q 000711 963 EKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQS 1042 (1338)
Q Consensus 963 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~~ 1042 (1338)
+.+.+.+.+.+..+...+..+...+......++... ...+.++++....... ..+.|.+..+. .+....
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----~~~~il~~g~~lv~~g--~it~G~lia~~----~l~~~~ 407 (694)
T TIGR01846 339 FQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQKL-----TFAILLWFGAHLVIGG--ALSPGQLVAFN----MLAGRV 407 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHhHHHHHHHHHcC--CCCHHHHHHHH----HHHHHH
Confidence 887777777766655444333333222222222111 1111122222111000 02344443322 344556
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCC-ccccccccce
Q 000711 1043 FLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTF 1121 (1338)
Q Consensus 1043 ~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~-~~~vL~~lsf 1121 (1338)
+.++..+......+.+...+.+|+.++.+.+++... .. ....| ...|.|+|+||+|.||+ .+++|+|+||
T Consensus 408 ~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~-----~~--~~~~~--~~~~~i~~~~vsf~y~~~~~~il~~i~l 478 (694)
T TIGR01846 408 TQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRS-----AG--LAALP--ELRGAITFENIRFRYAPDSPEVLSNLNL 478 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccC-----CC--CCCCC--CCCCeEEEEEEEEEcCCCCccccccceE
Confidence 678888888888999999999999998765432111 00 00111 12578999999999975 5679999999
Q ss_pred EEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCchH
Q 000711 1122 EIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSRE 1199 (1338)
Q Consensus 1122 ~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~ 1199 (1338)
+|+|||++||||+||||||||+++|.|+|+|++|+|.+||+|++++ ..+|++|+||||||++|+|||||||.++.+
T Consensus 479 ~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~-- 556 (694)
T TIGR01846 479 DIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNP-- 556 (694)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCC--
Confidence 9999999999999999999999999999999999999999999987 456778999999999999999999987432
Q ss_pred HHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEE
Q 000711 1200 EAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGI 1278 (1338)
Q Consensus 1200 ~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILi 1278 (1338)
+..+++++++++.+++.++++++|+||||.+ +.|.+||||||||+|||||++++|+|||
T Consensus 557 --------------------~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ili 616 (694)
T TIGR01846 557 --------------------GAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILI 616 (694)
T ss_pred --------------------CCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEE
Confidence 1124455666677777778888899999998 4788999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1279 LDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1279 LDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
||||||+||.++|+.+.+.+++ .++|+|+||||+++++.+|+++++++|+
T Consensus 617 lDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~ 668 (694)
T TIGR01846 617 FDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQ 668 (694)
T ss_pred EECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCE
Confidence 9999999999999999887654 5899999999999999999999997653
No 86
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2e-53 Score=579.40 Aligned_cols=456 Identities=16% Similarity=0.173 Sum_probs=323.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000711 164 SKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRL 242 (1338)
Q Consensus 164 ~~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l 242 (1338)
..|+....+.+ ..+++|++.++++.+.|++|||.. .++..+|+++|++.+.+.+...+..++..++..+... .+
T Consensus 1025 ~~~~~~~~~~~----~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~l-i~ 1099 (1522)
T TIGR00957 1025 YSMAVSIGGIQ----ASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGAL-IV 1099 (1522)
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 34444444444 788999999999999999999865 6789999999999988877766666555554433222 22
Q ss_pred HHhchhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHH
Q 000711 243 CSYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTR 322 (1338)
Q Consensus 243 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~ 322 (1338)
+.+.+|.++++++..+++..++..+..+..+.+....++..+.......+...++++|++|++|+.+.++..+..+...+
T Consensus 1100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~ 1179 (1522)
T TIGR00957 1100 ILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQK 1179 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 33345544333322222222222222233333222233333444455666667999999999999877655544444333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh-cccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 323 HMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFF-AGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSR 401 (1338)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 401 (1338)
........+.|.+....++. ..+.+++.....+ .+. .+.|.. . .+..+...+..++..+...+.
T Consensus 1180 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~~-----~~~g~l--~----~~l~~~~~~~~~l~~l~~~~~ 1244 (1522)
T TIGR00957 1180 AYYPSIVANRWLAVRLECVG----NCIVLFAALFAVISRHS-----LSAGLV--G----LSVSYSLQVTFYLNWLVRMSS 1244 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhcCC-----CCHHHH--H----HHHHHHHHHHHHHHHHHHHHH
Confidence 33222223333333322221 1111111100011 122 233322 1 123344555667888888889
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCC
Q 000711 402 RLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPN 480 (1338)
Q Consensus 402 ~l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~s 480 (1338)
.++....+.+|+.++++.+++.+..... ......++..+.|+|+||+|.|+++ +++|+|+||+|++||+++|||||
T Consensus 1245 ~~e~~~~s~eRi~~~~~~~~e~~~~~~~---~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrT 1321 (1522)
T TIGR00957 1245 EMETNIVAVERLKEYSETEKEAPWQIQE---TAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRT 1321 (1522)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccccccC---CCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCC
Confidence 9999999999999998765543210000 0001112335789999999999764 57999999999999999999999
Q ss_pred CCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHH
Q 000711 481 GSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVEL 554 (1338)
Q Consensus 481 GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~ 554 (1338)
|||||||+++|.|+++|++|+|.+||.| .++|++|++|||+|++|+|||||||.... ..+|++++++
T Consensus 1322 GsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-------~~sdeei~~a 1394 (1522)
T TIGR00957 1322 GAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-------QYSDEEVWWA 1394 (1522)
T ss_pred CCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-------CCCHHHHHHH
Confidence 9999999999999999999999999986 35788999999999999999999997321 2578999999
Q ss_pred HHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEE
Q 000711 555 LKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCI 629 (1338)
Q Consensus 555 l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i 629 (1338)
++.++++++++++|.+.++ +.|.+||||||||++|||||+++|+|||||||||+||.++++.|++.+++ .++|+|
T Consensus 1395 l~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI 1474 (1522)
T TIGR00957 1395 LELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVL 1474 (1522)
T ss_pred HHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999999999876554 46789999999999999999999999999999999999999999999986 489999
Q ss_pred EEecChhhHhhcceEEEccC
Q 000711 630 TISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 630 ~itH~~~~~~~~d~i~~l~~ 649 (1338)
+||||++++..+|+|++|++
T Consensus 1475 ~IAHRl~ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1475 TIAHRLNTIMDYTRVIVLDK 1494 (1522)
T ss_pred EEecCHHHHHhCCEEEEEEC
Confidence 99999999999999999986
No 87
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=9.7e-55 Score=547.51 Aligned_cols=193 Identities=23% Similarity=0.266 Sum_probs=151.1
Q ss_pred CceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEE
Q 000711 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYV 1177 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~V 1177 (1338)
..|+++||++.|++.+++|+|+||+|++|++++|+||||||||||+++|.|+.+|++|+|.+++. .+|+|+
T Consensus 507 ~~L~~~~ls~~y~~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~~---------~~igyv 577 (718)
T PLN03073 507 PIISFSDASFGYPGGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSAK---------VRMAVF 577 (718)
T ss_pred ceEEEEeeEEEeCCCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECCc---------eeEEEE
Confidence 36999999999976667999999999999999999999999999999999999999999997652 469999
Q ss_pred cCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchh-hhhhhcccCcccCcccCCC
Q 000711 1178 PQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY-LLEREEVGWDANLNWEDIL 1256 (1338)
Q Consensus 1178 pQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~-~i~~~~~Gldt~~~~g~~L 1256 (1338)
||++. ..-++.+|.... .... .+...+..+.++++.+++.. ...+ ....|
T Consensus 578 ~Q~~~-~~l~~~~~~~~~---------~~~~---------~~~~~~~~i~~~L~~~gl~~~~~~~----------~~~~L 628 (718)
T PLN03073 578 SQHHV-DGLDLSSNPLLY---------MMRC---------FPGVPEQKLRAHLGSFGVTGNLALQ----------PMYTL 628 (718)
T ss_pred ecccc-ccCCcchhHHHH---------HHHh---------cCCCCHHHHHHHHHHCCCChHHhcC----------Ccccc
Confidence 99973 222444443110 0000 00112445667777777642 1111 23579
Q ss_pred ChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHhcCCeEEEeccCCCCcc-cccceEEEecCC
Q 000711 1257 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIP-FHSLELRLIDGE 1328 (1338)
Q Consensus 1257 SgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~~~~TvI~IAHRl~~i~-~~d~~l~l~~g~ 1328 (1338)
|||||||++||||++++|++|||||||++||.++.+.+.+.++..+.|+|+|+|++..+. ++|++++|.+|.
T Consensus 629 SgGqkqRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~~gtvIivSHd~~~i~~~~drv~~l~~G~ 701 (718)
T PLN03073 629 SGGQKSRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLFQGGVLMVSHDEHLISGSVDELWVVSEGK 701 (718)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999988887766554569999999998664 689999997653
No 88
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1e-53 Score=540.12 Aligned_cols=459 Identities=16% Similarity=0.193 Sum_probs=313.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHh-------HH
Q 000711 816 PSIRHLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKP-------SV 887 (1338)
Q Consensus 816 ~~~~~~~~~~~~~~r~~l~~~l~~~~l~~-~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~-------~~ 887 (1338)
+...++..++..+....+...++++.++. ..+|+. ...++..+|+++|++.+...+...+..++.. ++
T Consensus 76 ~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~----~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~ 151 (576)
T TIGR02204 76 AARFYLVTWLGERVVADIRRAVFAHLISLSPSFFDK----NRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLI 151 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcc----CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444455555555666655553 345542 2346678999999999977655444333222 22
Q ss_pred HHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHHHHHH
Q 000711 888 DILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMI 967 (1338)
Q Consensus 888 ~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e~~~~ 967 (1338)
.++++.|.++.+.. +..++.........+.......+.++..+.+.....+...+.++|+.++.++.+...+
T Consensus 152 ~~~~~~~~l~~~~l--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~ 223 (576)
T TIGR02204 152 MMFITSPKLTSLVL--------LAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRF 223 (576)
T ss_pred HHHHHhHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHH
Confidence 23345565544321 1111111111222223334455555556666666677777889999999988887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHh--hcccchhhhchHHHHHHHHHHHHHHHHHHHH
Q 000711 968 ESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAME--HKGDRALVSTQGELAHALRFLASVVSQSFLA 1045 (1338)
Q Consensus 968 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~l~~~l~~~~~~~~~~~~~ 1045 (1338)
++...+..+...+..+...+...+..++.. +...+.++++.. ..+. .+.|.+..+. .+......+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~v~~g~----lt~g~~~~~~----~~~~~~~~p 290 (576)
T TIGR02204 224 GGAVEKAYEAARQRIRTRALLTAIVIVLVF-----GAIVGVLWVGAHDVIAGK----MSAGTLGQFV----FYAVMVAGS 290 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcCC----CCHHHHHHHH----HHHHHHHHH
Confidence 777766665544333322222221111110 111111111111 1111 1233333222 233445567
Q ss_pred HHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCCc--cccccccceEE
Q 000711 1046 FGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQ--KLLARQLTFEI 1123 (1338)
Q Consensus 1046 ~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~~--~~vL~~lsf~I 1123 (1338)
+..+......+.+...+.+|+.++.+.+++.+.. .......+| ..+.|+|+||+|.||+. +++|+|+||+|
T Consensus 291 l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~----~~~~~~~~~---~~~~i~~~~v~f~y~~~~~~~iL~~inl~i 363 (576)
T TIGR02204 291 IGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP----AHPKTLPVP---LRGEIEFEQVNFAYPARPDQPALDGLNLTV 363 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC----CCCccCCcC---CCceEEEEEEEEECCCCCCCccccceeEEe
Confidence 7888888888889999999999987543221110 000011112 14679999999999853 68999999999
Q ss_pred eCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCchHHH
Q 000711 1124 VPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEA 1201 (1338)
Q Consensus 1124 ~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~ 1201 (1338)
+|||+++|||+||||||||+++|+|+|+|++|+|.+||.|++++ ..+|++|+||||||++|+|||||||.++.+.
T Consensus 364 ~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~--- 440 (576)
T TIGR02204 364 RPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPD--- 440 (576)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCC---
Confidence 99999999999999999999999999999999999999999887 3456789999999999999999999876421
Q ss_pred HHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEEee
Q 000711 1202 ELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILD 1280 (1338)
Q Consensus 1202 ~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLD 1280 (1338)
..|++++++++.+++.++++++|+|+||.+ ++|.+||||||||+|||||++++|+|||||
T Consensus 441 -------------------~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal~~~~~ililD 501 (576)
T TIGR02204 441 -------------------ATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAILKDAPILLLD 501 (576)
T ss_pred -------------------CCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHHHhCCCeEEEe
Confidence 135567778888888888999999999997 578899999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1281 ECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1281 EATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
||||+||.++|+.+.+.++. .++|+|+||||++.++.+|+++++++|+
T Consensus 502 Epts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~ 551 (576)
T TIGR02204 502 EATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGR 551 (576)
T ss_pred CcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCE
Confidence 99999999999988876654 5899999999999999999999998765
No 89
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.7e-55 Score=485.15 Aligned_cols=258 Identities=22% Similarity=0.289 Sum_probs=216.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCCcccccccc
Q 000711 1040 SQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQL 1119 (1338)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~~~~vL~~l 1119 (1338)
.|...+.+-+...++.+.+....+++.+++.+.+.+... ....++-|| ...|.|.|+||+|.|...+|+|+|+
T Consensus 210 ~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d-----~pda~~L~~--~~~g~v~F~~V~F~y~~~r~iL~~i 282 (497)
T COG5265 210 FQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSD-----APDAPPLWP--VRLGAVAFINVSFAYDPRRPILNGI 282 (497)
T ss_pred hhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhcc-----CCCCccccc--cccceEEEEEEEeeccccchhhcCc
Confidence 344556666666677776666667777777655433221 111234455 3478999999999998889999999
Q ss_pred ceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCC-
Q 000711 1120 TFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPL- 1196 (1338)
Q Consensus 1120 sf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~- 1196 (1338)
||++++|+++||||+||+||||+.++|+||||+++|.|.|||+||+++ ..+|+.||+||||.+||+.|+..|+.|+.
T Consensus 283 sf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~ 362 (497)
T COG5265 283 SFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRP 362 (497)
T ss_pred cccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCc
Confidence 999999999999999999999999999999999999999999999998 56788899999999999999999999953
Q ss_pred -chHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCC
Q 000711 1197 -SREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKP 1274 (1338)
Q Consensus 1197 -~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p 1274 (1338)
.+++|+..|++.| .++++++.+|+||||.+ ++|-.||||||||+||||++|++|
T Consensus 363 ~at~eev~aaa~~a------------------------qi~~fi~~lP~gy~t~VgerglklSggekqrvaiar~ilk~p 418 (497)
T COG5265 363 DATAEEVGAAAEAA------------------------QIHDFIQSLPEGYDTGVGERGLKLSGGEKQRVAIARTILKNP 418 (497)
T ss_pred cccHHHHHHHHHHh------------------------hhhHHHHhCchhhhcccchheeeccCchHHHHHHHHHHhcCC
Confidence 4455555555554 44456677789999988 578889999999999999999999
Q ss_pred CEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1275 KFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1275 ~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
+||+|||||||||..||++||..+++ .|+|.++||||++||-.+|.+++|++|.
T Consensus 419 ~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~ 474 (497)
T COG5265 419 PILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGR 474 (497)
T ss_pred CEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCE
Confidence 99999999999999999999998765 6999999999999999999999997763
No 90
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=6.4e-53 Score=526.74 Aligned_cols=521 Identities=12% Similarity=0.077 Sum_probs=355.8
Q ss_pred HHHHHHHHh-cccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 88 LQVLAAILL-SEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKY 166 (1338)
Q Consensus 88 l~~l~~~~~-p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (1338)
.++++++++ |+++. +++.+++.++.+...+..+.+.+.+++...... . ..+..++++. ++..+..|
T Consensus 5 ~~~l~~~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~-~---~~~~~~~~~~----~~~~~~~~ 71 (555)
T TIGR01194 5 IGEILALLRSPFPAI-----TAFSIALGLAGGLAIIALLASINNAIHEENFLG-Q---GSLFSFGGLC----LLALLFRI 71 (555)
T ss_pred HHHHHHHHhhccHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-c---hHHHHHHHHH----HHHHHHHH
Confidence 356677777 77662 455555566666666677776666654211000 0 1111111211 22233445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 000711 167 ITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSY 245 (1338)
Q Consensus 167 l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~ 245 (1338)
+..++..+...++..++|.++|+++.+.+++++++. .++..+|+++|++.+.+.+.. +...+..++..+ .+..++++
T Consensus 72 ~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~-~~~~~l~~ 149 (555)
T TIGR01194 72 GADIFPAYAGMHIIANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFF-FCIAYLAY 149 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHH-HHHHHHHH
Confidence 555555555566899999999999999999998764 779999999999998876653 444444433332 23334556
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChH--HHHHHHHHHHHHHHHH
Q 000711 246 ASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGEN--KEESHIQQKFKALTRH 323 (1338)
Q Consensus 246 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~--~e~~~~~~~~~~~~~~ 323 (1338)
++|.+++++++.+++..++..++.++..+...+.++..+++.....+...+.++|+.|+.++ .+.+ +|++..+.
T Consensus 150 ~~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~----~~~~~~~~ 225 (555)
T TIGR01194 150 LSVPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHG----AIQESANN 225 (555)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHH----HhhHHHHH
Confidence 78888888776666655555555566666666667777777777777788999999999854 3333 34433333
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 324 MRVV-LHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRR 402 (1338)
Q Consensus 324 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 402 (1338)
.++. .+...................++.+++ +++.. +..+.|.. ++. ..++..++.++..+...+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~t~g~l--~a~----~~~~~~l~~pi~~l~~~~~~ 293 (555)
T TIGR01194 226 IADLHIIEILIFIAAENFGQLLFFLLIGCALF----AAAMF--ASIDAAAI--SAF----VLALLYIKGPLEMLVSALPI 293 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHh--cCCCHHHH--HHH----HHHHHHHHHHHHHHHHHHHH
Confidence 2221 111112222212111111111111111 22111 12344432 322 23344556788888889999
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCC--CCcCCCCcEEEEeEEEEcCCC----CeeeeeeeEEEeCCCEEEE
Q 000711 403 LNRLSGYADRIHELMVISRELSIEDKSPQRNGSR--NYFSEANYIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLI 476 (1338)
Q Consensus 403 l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~v~~~~~~~----~~~l~~~sl~i~~G~~~~i 476 (1338)
+++...+.+|+.++++.+++.+............ ......+.|+++||+|.|++. +++|+|+||++++||+++|
T Consensus 294 ~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~ai 373 (555)
T TIGR01194 294 LAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFI 373 (555)
T ss_pred HHHHHHHHHHHHHHHhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEE
Confidence 9999999999999976422110000000000000 000123579999999999753 3699999999999999999
Q ss_pred EcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHH
Q 000711 477 TGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGG 550 (1338)
Q Consensus 477 ~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~ 550 (1338)
+||||||||||+++|+|+++|++|+|.++|.+ .++++.++||+|+|++|++|+++|+ .+ ..++++
T Consensus 374 vG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~-~~--------~~~~~~ 444 (555)
T TIGR01194 374 VGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE-GE--------HASLDN 444 (555)
T ss_pred ECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc-cc--------chhHHH
Confidence 99999999999999999999999999999975 2456789999999999999999995 11 246778
Q ss_pred HHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHH----ccCC
Q 000711 551 MVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVR----AMGT 626 (1338)
Q Consensus 551 ~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~----~~~~ 626 (1338)
+.++++.++++++++++|.+.++. .+||||||||++||||++++|+++|||||||+||+++++.+++.+. ..++
T Consensus 445 ~~~~~~~~~l~~~~~~lp~g~~t~--~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~ 522 (555)
T TIGR01194 445 AQQYLQRLEIADKVKIEDGGFSTT--TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGK 522 (555)
T ss_pred HHHHHHHcCCchhhcccccccCCc--ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999998765553 7899999999999999999999999999999999999999987542 3589
Q ss_pred eEEEEecChhhHhhcceEEEccCC
Q 000711 627 SCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 627 t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
|+|+||||++++..+|+|++|+++
T Consensus 523 tiiiisH~~~~~~~~d~i~~l~~G 546 (555)
T TIGR01194 523 TIIIISHDDQYFELADQIIKLAAG 546 (555)
T ss_pred EEEEEeccHHHHHhCCEEEEEECC
Confidence 999999999999999999999863
No 91
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.6e-52 Score=568.21 Aligned_cols=454 Identities=17% Similarity=0.210 Sum_probs=319.2
Q ss_pred HHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhchhhHHHHHHHH
Q 000711 179 VTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAY 257 (1338)
Q Consensus 179 lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~ 257 (1338)
..+++|++.|+++.+.|++|||.. .++..+|+++|++.+.+.+...+..++..++..+... .++.+.+|...++++.+
T Consensus 1029 ~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~l-i~~~~~~p~~~~~~i~~ 1107 (1560)
T PTZ00243 1029 GSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSI-LVTSASQPFVLVALVPC 1107 (1560)
T ss_pred HHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 456889999999999999999875 6799999999999988877766655555444433322 22334455222221111
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 258 VLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMI 337 (1338)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (1338)
+++...+..++.+....+........+.......+...+.++|+.|+.|+.+.+++.+..+...+..........|.+..
T Consensus 1108 ~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~ 1187 (1560)
T PTZ00243 1108 GYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVR 1187 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111222222222222222333444556677777999999999999998877777666655444433444455544
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 338 QDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELM 417 (1338)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~ 417 (1338)
..++.......++++.+.. .+.+. +..+.|... .+..+...+..++..+...+..++....+.+|+.+++
T Consensus 1188 ~~~l~~~~~~~~~~~~~~~-~~~~~---~~~~~g~l~------~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~ 1257 (1560)
T PTZ00243 1188 VEFLSNIVVTVIALIGVIG-TMLRA---TSQEIGLVS------LSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYT 1257 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHhcc---CCCCHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433211111111111110 11111 112333221 1223344556677788888889999999999999998
Q ss_pred HhhhhccccC--C-------------C------CCCCCCC---CCcCCCCcEEEEeEEEEcCCC-CeeeeeeeEEEeCCC
Q 000711 418 VISRELSIED--K-------------S------PQRNGSR---NYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGS 472 (1338)
Q Consensus 418 ~~~~~~~~~~--~-------------~------~~~~~~~---~~~~~~~~i~~~~v~~~~~~~-~~~l~~~sl~i~~G~ 472 (1338)
+..++.+... . . ....... ...+..+.|+|+||+|.|+++ .++|+|+||+|++||
T Consensus 1258 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~vsf~I~~Ge 1337 (1560)
T PTZ00243 1258 DEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGVSFRIAPRE 1337 (1560)
T ss_pred hcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecceEEECCCC
Confidence 6433211000 0 0 0000000 011124679999999999765 469999999999999
Q ss_pred EEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCC
Q 000711 473 NLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPL 546 (1338)
Q Consensus 473 ~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~ 546 (1338)
+++|||+||||||||+++|+|+++|++|+|.+||.| .++|++|+||||+|++|+|||||||.... ..
T Consensus 1338 kVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~-------~~ 1410 (1560)
T PTZ00243 1338 KVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFL-------EA 1410 (1560)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCccc-------CC
Confidence 999999999999999999999999999999999986 35788999999999999999999996532 35
Q ss_pred CHHHHHHHHHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccC-CCEEEEecCCCCCCHHHHHHHHHHHH
Q 000711 547 THGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHK-PKFAILDECTSAVTTDMEERFCAKVR 622 (1338)
Q Consensus 547 ~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~-p~illLDEpts~LD~~~~~~i~~~l~ 622 (1338)
++++++++++.+++++++.++|.+.++ +.|.+|||||||||+|||||+++ |+|||||||||+||+++++.|++.++
T Consensus 1411 sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~ 1490 (1560)
T PTZ00243 1411 SSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVM 1490 (1560)
T ss_pred CHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHH
Confidence 789999999999999999999876554 46889999999999999999996 89999999999999999999999997
Q ss_pred c--cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 623 A--MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 623 ~--~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
+ .++|+|+||||++++..+|+|++|+++
T Consensus 1491 ~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G 1520 (1560)
T PTZ00243 1491 SAFSAYTVITIAHRLHTVAQYDKIIVMDHG 1520 (1560)
T ss_pred HHCCCCEEEEEeccHHHHHhCCEEEEEECC
Confidence 6 489999999999999999999999873
No 92
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.1e-52 Score=571.32 Aligned_cols=464 Identities=16% Similarity=0.207 Sum_probs=312.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000711 161 HSTSKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYT 239 (1338)
Q Consensus 161 ~~~~~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~ 239 (1338)
..+..|+....+.+ ..+++|++.++++.+.|++|||++ .++..+|+++|++.+.+.+...+..++..++..+...
T Consensus 967 ~~~~~~~~~~~~~~----~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~ 1042 (1495)
T PLN03232 967 TFTNSFWLISSSLH----AAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTF 1042 (1495)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444 888999999999999999999875 6799999999999988877766555554443332221
Q ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHH
Q 000711 240 WRLCSYASPKYVFWILAYVLGAGTMMRNFS-PAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFK 318 (1338)
Q Consensus 240 ~~l~~~~~~~l~~~~l~~~~~~~~~~~~~~-~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~ 318 (1338)
.. +.++++ +.+++++.+++...+...+. +....+........+.+.....+...+.++|++|+.++++.++..+..+
T Consensus 1043 i~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~ 1120 (1495)
T PLN03232 1043 AL-IGTVST-ISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMD 1120 (1495)
T ss_pred HH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHH
Confidence 11 112222 22221111111111111111 1111122222223333444456666799999999998876543333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh-cccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 319 ALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFF-AGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLS 397 (1338)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~ 397 (1338)
...+..........|.+..... +...+.++......+ .+... ....++ ..+ ..+.++...+..++..+.
T Consensus 1121 ~~~~~~~~~~~~~~wl~~~~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~~~--~~~---g~~~~~~~~~~~~l~~l~ 1190 (1495)
T PLN03232 1121 NNIRFTLANTSSNRWLTIRLET----LGGVMIWLTATFAVLRNGNAE-NQAGFA--STM---GLLLSYTLNITTLLSGVL 1190 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcccccc-ccccch--HHH---HHHHHHHHHHHHHHHHHH
Confidence 2221111111112222221111 111111110000011 12110 000111 111 112334455666777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEE
Q 000711 398 ISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLI 476 (1338)
Q Consensus 398 ~~~~~l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i 476 (1338)
..+..++....+.+|+.++++.++|.+..... ......++..+.|+|+||+|.|+++ +++|+|+||+|++||+++|
T Consensus 1191 ~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~---~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaI 1267 (1495)
T PLN03232 1191 RQASKAENSLNSVERVGNYIDLPSEATAIIEN---NRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGV 1267 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccccC---CCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcCCCEEEE
Confidence 88889999999999999998766543211000 0000112234679999999999654 6899999999999999999
Q ss_pred EcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHH
Q 000711 477 TGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGG 550 (1338)
Q Consensus 477 ~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~ 550 (1338)
|||||||||||+++|.|+++|++|+|.+||.| .++|++|+||||+|++|+|||||||.++. ..+|++
T Consensus 1268 VG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-------~~sdee 1340 (1495)
T PLN03232 1268 VGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-------EHNDAD 1340 (1495)
T ss_pred ECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-------CCCHHH
Confidence 99999999999999999999999999999976 35788999999999999999999998753 257899
Q ss_pred HHHHHHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cC
Q 000711 551 MVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MG 625 (1338)
Q Consensus 551 ~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~ 625 (1338)
++++++.++++++++++|.+.++ +.|.+||||||||++|||||+++|+|||||||||+||+++++.|++.+++ .+
T Consensus 1341 i~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~ 1420 (1495)
T PLN03232 1341 LWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKS 1420 (1495)
T ss_pred HHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999876554 46889999999999999999999999999999999999999999999986 48
Q ss_pred CeEEEEecChhhHhhcceEEEccCC
Q 000711 626 TSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 626 ~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
+|+|+||||++++..+|+|++|+++
T Consensus 1421 ~TvI~IAHRl~ti~~~DrIlVL~~G 1445 (1495)
T PLN03232 1421 CTMLVIAHRLNTIIDCDKILVLSSG 1445 (1495)
T ss_pred CEEEEEeCCHHHHHhCCEEEEEECC
Confidence 9999999999999999999999863
No 93
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=9.2e-53 Score=527.96 Aligned_cols=466 Identities=15% Similarity=0.148 Sum_probs=310.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHhH--
Q 000711 810 ASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPS-- 886 (1338)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~-~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~~-- 886 (1338)
+.++..+....+..++..+.+..+..++++..++. ..||+. ...++..+|+++|++.+...+...+..++..+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~l~~~~~~~----~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~ 143 (585)
T TIGR01192 68 FNTIAYVLVAREADRLAHGRRATLLTEAFGRIISMPLSWHQQ----RGTSNALHTLLRATETLFGLWLEFMRQHLATFVA 143 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC----CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444455556666667776777777777764 467763 23467889999999988766555444333222
Q ss_pred -----HHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChH
Q 000711 887 -----VDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGA 961 (1338)
Q Consensus 887 -----~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~ 961 (1338)
+.+++++|.++++.. +++++++ .+.....++......+.++..+.+.....+...+.++|+.|+.+.
T Consensus 144 ~~~~~~~l~~~~~~l~li~l----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~ 215 (585)
T TIGR01192 144 LFLLIPTAFAMDWRLSIVLM----VLGILYI----LIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIE 215 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccH
Confidence 223445676655431 1111111 111222222222222222233333334445556789999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHHHHHHHHH
Q 000711 962 REKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQ 1041 (1338)
Q Consensus 962 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~ 1041 (1338)
.+.+.+.+..++..+......+...+......++.. +...+.++++....... ..+.|.+..+.. +...
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~g~~~v~~g--~it~g~l~a~~~----~~~~ 284 (585)
T TIGR01192 216 AETSALKQFTNNLLSAQYPVLDWWALASGLNRMAST-----ISMMCILVIGTVLVIKG--ELSVGEVIAFIG----FANL 284 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcC--CCCHHHHHHHHH----HHHH
Confidence 887777766666555444333332222222111111 11111122221110000 013344433332 2334
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCCccccccccce
Q 000711 1042 SFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTF 1121 (1338)
Q Consensus 1042 ~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~~~~vL~~lsf 1121 (1338)
+..++..+......+.+...+.+|+.++.+.+++.++. . .+..++. ..+.|+|+||+|.||+.+++|+|+||
T Consensus 285 l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~-----~-~~~~~~~--~~~~i~~~~v~~~y~~~~~~l~~i~~ 356 (585)
T TIGR01192 285 LIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEP-----A-DAPELPN--VKGAVEFRHITFEFANSSQGVFDVSF 356 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC-----c-cCCCCCC--CCCeEEEEEEEEECCCCCccccceeE
Confidence 45566677777777777888889998876543221110 0 0011121 24689999999999876789999999
Q ss_pred EEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCchH
Q 000711 1122 EIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSRE 1199 (1338)
Q Consensus 1122 ~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~ 1199 (1338)
+|++||++|||||||||||||+++|.|+|+|++|+|.+||.|++++ ..+|++++||||||++|+||+||||.++.+.
T Consensus 357 ~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~- 435 (585)
T TIGR01192 357 EAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREG- 435 (585)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCC-
Confidence 9999999999999999999999999999999999999999999887 3456789999999999999999999875321
Q ss_pred HHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEE
Q 000711 1200 EAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGI 1278 (1338)
Q Consensus 1200 ~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILi 1278 (1338)
..|++++++++.+++.+++.++|+|+||.+ ++|.+|||||||||+||||++++|+|||
T Consensus 436 ---------------------~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~~p~ili 494 (585)
T TIGR01192 436 ---------------------ATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILKNAPILV 494 (585)
T ss_pred ---------------------CCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 123445555566666677777899999987 5788999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1279 LDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1279 LDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
||||||+||.++++.+.+.+++ .++|+|+|+||+++++.+|++++|++|+
T Consensus 495 lDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~ 546 (585)
T TIGR01192 495 LDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGR 546 (585)
T ss_pred EECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCE
Confidence 9999999999999999887654 4899999999999999999999997764
No 94
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.4e-53 Score=532.66 Aligned_cols=460 Identities=15% Similarity=0.175 Sum_probs=302.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccchhhcccCCCCCCccchhHHHHHHHHHHHHHHHHHhhHh----H--
Q 000711 814 IAPSIRHLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKP----S-- 886 (1338)
Q Consensus 814 ~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~-~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~~~~~~i~~----~-- 886 (1338)
..+..+++......+...++...++++.++. ..||+. ...++..+|+++|++.+.......+..++.. +
T Consensus 52 ~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~----~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~ 127 (569)
T PRK10789 52 LRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLR----HRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAV 127 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC----CCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444444555555556666666654 356652 2346788999999999875443332222221 1
Q ss_pred -HHH-HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHHH
Q 000711 887 -VDI-LWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREK 964 (1338)
Q Consensus 887 -~~i-~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e~ 964 (1338)
+.+ ++++|.++++.. ++ +++...+.....+...+...+.++..+.+.....+...+.++++.|+.++.+.
T Consensus 128 ~~~~~~~~~~~l~li~l----~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~ 199 (569)
T PRK10789 128 LIVMSTQISWQLTLLAL----LP----MPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQS 199 (569)
T ss_pred HHHHHHHHhHHHHHHHH----HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHH
Confidence 111 245666654321 11 11111111111122222223333333333334445556778999999888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHHHHHHHHHHHH
Q 000711 965 AMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFL 1044 (1338)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~~~~ 1044 (1338)
+.+.+...+..+......+............. .+...+.++++....... ..+.|.+..+.. +......
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~g~~lv~~g--~lt~g~l~a~~~----~~~~~~~ 268 (569)
T PRK10789 200 ALFAADAEDTGKKNMRVARIDARFDPTIYIAI-----GMANLLAIGGGSWMVVNG--SLTLGQLTSFVM----YLGLMIW 268 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHcC--CcCHHHHHHHHH----HHHHHHH
Confidence 77766665555444333222222111111111 011111111211110000 013344433332 2334556
Q ss_pred HHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCC-ccccccccceEE
Q 000711 1045 AFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEI 1123 (1338)
Q Consensus 1045 ~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~-~~~vL~~lsf~I 1123 (1338)
++..+......+.....+.+|+.++.+.+++.++. .. .-| ...+.|+|+||+|.||+ ++++|+|+||+|
T Consensus 269 pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~----~~----~~~--~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i 338 (569)
T PRK10789 269 PMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDG----SE----PVP--EGRGELDVNIRQFTYPQTDHPALENVNFTL 338 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCC----CC----CCC--CCCCcEEEEEEEEECCCCCCccccCeeEEE
Confidence 67777777888888889999999987643221110 00 001 12468999999999986 468999999999
Q ss_pred eCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCchHHH
Q 000711 1124 VPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEA 1201 (1338)
Q Consensus 1124 ~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~ 1201 (1338)
+|||+++||||||||||||+++|.|+|+|++|+|.+||.|++++ ..+|++++||||+|++|+||+||||.++.+
T Consensus 339 ~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~---- 414 (569)
T PRK10789 339 KPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRP---- 414 (569)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCC----
Confidence 99999999999999999999999999999999999999999876 355778999999999999999999987532
Q ss_pred HHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEEee
Q 000711 1202 ELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILD 1280 (1338)
Q Consensus 1202 ~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLD 1280 (1338)
+..|++++++++.+++++++.++|+|+||.+ ++|.+||||||||+|||||++++|+|+|||
T Consensus 415 ------------------~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlD 476 (569)
T PRK10789 415 ------------------DATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILD 476 (569)
T ss_pred ------------------CCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 1124455666677777777888899999998 578899999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1281 ECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1281 EATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
||||+||.++++.+.+.++. .++|+|+|+||+++++.+|+++++++|+
T Consensus 477 Epts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~ 526 (569)
T PRK10789 477 DALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGH 526 (569)
T ss_pred CccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCE
Confidence 99999999999999887654 5899999999999999999999997653
No 95
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=2.1e-54 Score=535.95 Aligned_cols=183 Identities=24% Similarity=0.271 Sum_probs=153.2
Q ss_pred eEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEE-----------eCCCCc--------
Q 000711 449 GVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIA-----------KPGVGS-------- 509 (1338)
Q Consensus 449 ~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~-----------~~~~~~-------- 509 (1338)
++++.|..+..+|++++ .+++||+++|+||||||||||+|+|+|+++|++|+|. ++|.+-
T Consensus 78 ~~~~~yg~~~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~~~~ 156 (590)
T PRK13409 78 EPVHRYGVNGFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFKKLY 156 (590)
T ss_pred CceEEecCCceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHHHHh
Confidence 36777854457999999 9999999999999999999999999999999999997 777541
Q ss_pred cccccEEEE----ecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHH
Q 000711 510 DLNKEIFYV----PQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQ 585 (1338)
Q Consensus 510 ~~~~~i~~v----~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQ 585 (1338)
....++++. +|.|.++.+|++||+.+. ...+++.++++.+++.+..++.+ .+|||||||
T Consensus 157 ~~~~~~~~~~q~~~~~p~~~~~tv~e~l~~~---------~~~~~~~~~l~~l~l~~~~~~~~--------~~LSgGe~q 219 (590)
T PRK13409 157 NGEIKVVHKPQYVDLIPKVFKGKVRELLKKV---------DERGKLDEVVERLGLENILDRDI--------SELSGGELQ 219 (590)
T ss_pred ccCcceeecccchhhhhhhhcchHHHHHHhh---------hHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHH
Confidence 111234544 455667778999999642 12356888999999988777755 689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHcc--CCeEEEEecChhhHh-hcceEEEccC
Q 000711 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 586 RlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|++|||||+++|+++|||||||+||+.....+.+.+++. |+|+|+|||+++.+. .+|+++++.+
T Consensus 220 rv~ia~al~~~p~lllLDEPts~LD~~~~~~l~~~i~~l~~g~tvIivsHd~~~l~~~~D~v~vl~~ 286 (590)
T PRK13409 220 RVAIAAALLRDADFYFFDEPTSYLDIRQRLNVARLIRELAEGKYVLVVEHDLAVLDYLADNVHIAYG 286 (590)
T ss_pred HHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999887654 999999999999875 6899999865
No 96
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=4.3e-53 Score=508.91 Aligned_cols=192 Identities=25% Similarity=0.358 Sum_probs=155.6
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCccccccEEEEecCCC
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPY 523 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~ 523 (1338)
.|+++|+++.| +++++++|+||++.+|++++|||+||||||||||+|+|...|++|+|..++ .-+++|++|++.
T Consensus 3 ~i~~~~ls~~~-g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~-----~~~v~~l~Q~~~ 76 (530)
T COG0488 3 MITLENLSLAY-GDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPK-----GLRVGYLSQEPP 76 (530)
T ss_pred eEEEeeeEEee-CCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecC-----CceEEEeCCCCC
Confidence 58999999999 578999999999999999999999999999999999999999999999876 237999999999
Q ss_pred CCCC-CHHHHhcCCCCCCccc------------C------------------CCCHHHHHHHHHHcCCchHHhcCCCCcc
Q 000711 524 TAVG-TLRDQLIYPLTSDQEV------------E------------------PLTHGGMVELLKNVDLEYLLDRYPPEKE 572 (1338)
Q Consensus 524 l~~~-tl~eni~~~~~~~~~~------------~------------------~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 572 (1338)
.... |+.+.+.-+....... + ...+.++..++..+++.+. ++
T Consensus 77 ~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~------ 149 (530)
T COG0488 77 LDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DR------ 149 (530)
T ss_pred cCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cC------
Confidence 8765 9999887654210000 0 0001223333333333332 11
Q ss_pred ccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHccCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 573 INWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 573 ~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
.-.+||||||.|++|||||+.+||+|+|||||++||.++..++-+.|++...|+|+||||-.++. -|++|+.++.+
T Consensus 150 --~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~gtviiVSHDR~FLd~V~t~I~~ld~g 226 (530)
T COG0488 150 --PVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYPGTVIVVSHDRYFLDNVATHILELDRG 226 (530)
T ss_pred --chhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHhhheEEecCC
Confidence 23689999999999999999999999999999999999999999999875339999999999885 68999988863
No 97
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=6.3e-52 Score=518.11 Aligned_cols=458 Identities=19% Similarity=0.202 Sum_probs=301.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccchhhcccCCCCCCccchhHHHHHHHHHHHHH-HHHHhhHh----
Q 000711 811 SSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSG-LVTGMVKP---- 885 (1338)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~l~~~~ff~~~~~~~~~~~~~~Rls~D~~~l~~~l~~-~~~~~i~~---- 885 (1338)
..+..+...++..+...++...+..+++++.++.+. . ...+..+++++|++.+...+.. .+..++..
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~--~------~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~ 130 (544)
T TIGR01842 59 LGLLDALRSFVLVRIGEKLDGALNQPIFAASFSATL--R------RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMP 130 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc--c------CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 334444444444455555555555555555554321 0 1123467899999988776554 22222211
Q ss_pred --HHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcCccccccHHHHHhccchHHHHHHHHhhHHHhhhcCChHHH
Q 000711 886 --SVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGARE 963 (1338)
Q Consensus 886 --~~~i~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~~~~~~e~i~~~~~~~~e 963 (1338)
++.+++++|.++++.. +.+++++++ .....+.......+.++..+.......+...+.++++.|+.+...
T Consensus 131 ~~~~~l~~~~~~l~li~l----~~~~l~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~ 202 (544)
T TIGR01842 131 IYLLVCFLLHPWIGILAL----GGAVVLVGL----ALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNL 202 (544)
T ss_pred HHHHHHHHHhhHHHHHHH----HHHHHHHHH----HHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHH
Confidence 1223445666554321 001111111 111111112222233333333444445556678999999988887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhchHHHHHHHHHHHHHHHHHH
Q 000711 964 KAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSF 1043 (1338)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~~~~~~~~~~ 1043 (1338)
.+.+++.+++..+...+..+..........++... ...+.++++....... ..+.|.+..+.. +.....
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~l~~~g--~it~g~l~a~~~----~~~~~~ 271 (544)
T TIGR01842 203 TKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIV-----LQSLVLGLGAYLAIDG--EITPGMMIAGSI----LVGRAL 271 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHcC--CCCHHHHHHHHH----HHHHHH
Confidence 77777766666554443333222221111111110 0111111221110000 023444433332 334556
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCC-ccccccccceE
Q 000711 1044 LAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFE 1122 (1338)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~-~~~vL~~lsf~ 1122 (1338)
.++..+......+.+...+.+|+.++.+.+++..+ .. ..+. ..+.|+|+||+|.||+ .+++|+|+||+
T Consensus 272 ~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~-----~~----~~~~--~~~~i~~~~v~~~y~~~~~~~l~~~~~~ 340 (544)
T TIGR01842 272 APIDGAIGGWKQFSGARQAYKRLNELLANYPSRDP-----AM----PLPE--PEGHLSVENVTIVPPGGKKPTLRGISFR 340 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC-----CC----CCCC--CCCeEEEEEEEEEcCCCCccccccceEE
Confidence 67888888888889999999999999765322111 00 0111 2468999999999986 46899999999
Q ss_pred EeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCchHH
Q 000711 1123 IVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREE 1200 (1338)
Q Consensus 1123 I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~ 1200 (1338)
|+|||++|||||||||||||+++|+|+|+|++|+|.+||.|++++ ..+|++++||||||++|+||+||||.+...
T Consensus 341 i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~--- 417 (544)
T TIGR01842 341 LQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLPQDVELFPGTVAENIARFGE--- 417 (544)
T ss_pred EcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEecCCcccccccHHHHHhccCC---
Confidence 999999999999999999999999999999999999999999887 345678999999999999999999975321
Q ss_pred HHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEEe
Q 000711 1201 AELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGIL 1279 (1338)
Q Consensus 1201 ~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiL 1279 (1338)
+..+++++++++.++++++++++|+|+||.+ ++|.+||||||||+|||||++++|+||||
T Consensus 418 -------------------~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ilil 478 (544)
T TIGR01842 418 -------------------NADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVL 478 (544)
T ss_pred -------------------CCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 1124445566677777788888899999987 57899999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1280 DECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1280 DEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
|||||+||.++++.+.+.+++ .++|+|+|+||+++++.+|++++|++|+
T Consensus 479 DEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~ 530 (544)
T TIGR01842 479 DEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGR 530 (544)
T ss_pred eCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCE
Confidence 999999999999999876653 4799999999999999999999997764
No 98
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.8e-51 Score=548.26 Aligned_cols=207 Identities=22% Similarity=0.278 Sum_probs=159.2
Q ss_pred ceEEeeeEEeCC--C----------ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCC--CCceEEcCCCCC
Q 000711 1099 SISFSKLDIITP--S----------QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV--VSGSLTKPSQHI 1164 (1338)
Q Consensus 1099 ~I~f~nV~f~yp--~----------~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~--~sG~I~idg~dI 1164 (1338)
.+.|+||+++.+ . ...+|+|+|++|+|||.+||+||||||||||+++|.|..++ .+|+|.++|.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 699999999653 1 23699999999999999999999999999999999999874 689999999887
Q ss_pred ccccCCcccEEEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhc
Q 000711 1165 DEEAGSGCGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREE 1243 (1338)
Q Consensus 1165 ~~~~~lr~~i~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~ 1243 (1338)
+... .++.++||+|++.++. -|++|||.++.. ++.- .+ .. .+..+..+.++++.++|.+..
T Consensus 947 ~~~~-~~~~igyv~Q~d~~~~~lTV~E~L~~~a~--------lr~~--~~-~~--~~~~~~~v~~vl~~lgL~~~~---- 1008 (1470)
T PLN03140 947 KQET-FARISGYCEQNDIHSPQVTVRESLIYSAF--------LRLP--KE-VS--KEEKMMFVDEVMELVELDNLK---- 1008 (1470)
T ss_pred ChHH-hhhheEEEccccccCCCCcHHHHHHHHHH--------hCCC--CC-CC--HHHHHHHHHHHHHHCCChhHh----
Confidence 6432 2346999999998876 599999975310 0000 00 00 000123356677777775432
Q ss_pred ccCcccCc--ccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCC--cc
Q 000711 1244 VGWDANLN--WEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPAL--IP 1316 (1338)
Q Consensus 1244 ~Gldt~~~--~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~--i~ 1316 (1338)
|+.++ ....||||||||++|||+|+.+|+||+||||||+||..+...+.+.+++ .|+|||+++|.++. .+
T Consensus 1009 ---~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~ 1085 (1470)
T PLN03140 1009 ---DAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE 1085 (1470)
T ss_pred ---CCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHH
Confidence 33332 1246999999999999999999999999999999999999887776543 58999999999984 57
Q ss_pred cccceEEEec
Q 000711 1317 FHSLELRLID 1326 (1338)
Q Consensus 1317 ~~d~~l~l~~ 1326 (1338)
.+|+++.|.+
T Consensus 1086 ~~D~vllL~~ 1095 (1470)
T PLN03140 1086 AFDELLLMKR 1095 (1470)
T ss_pred hCCEEEEEcC
Confidence 8899999965
No 99
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=9.4e-51 Score=507.41 Aligned_cols=508 Identities=16% Similarity=0.153 Sum_probs=338.8
Q ss_pred HHHHhcccCchhHHHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 92 AAILLSEMGKMGARDLLALVGIVVLRTALSNRL-AKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYITGT 170 (1338)
Q Consensus 92 ~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 170 (1338)
.++++++++ . ++..+++.++...+.+.. +.+.+.++|.+.. +... +..+++++++..++..+..|+...
T Consensus 5 ~~~~~~~~~----~-~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 74 (547)
T PRK10522 5 RLVWRQYRW----P-FISVMALSLASAALGIGLIAFINQRLIETADT-SLLV----LPEFLGLLLLLMAVTLGSQLALTT 74 (547)
T ss_pred HHHHHhhhH----H-HHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-cchH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555544 2 444555666666666654 5555666665432 1111 111212222222233444455554
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhchhh
Q 000711 171 LSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPK 249 (1338)
Q Consensus 171 l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~ 249 (1338)
++.+ +..++|.++++++...++++++++ .++..+|+++|++.+...+.. +..++..++..+.+.+ ++++++|.
T Consensus 75 ~~~~----~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~-l~~~~~~~~~~i~~~~-~l~~~~~~ 148 (547)
T PRK10522 75 LGHH----FVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVR-LPELVQGIILTLGSAA-YLAWLSPK 148 (547)
T ss_pred HHHH----HHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHHhHH
Confidence 4444 888899999999999999998764 779999999999988765443 3344444444333333 34567888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH-H
Q 000711 250 YVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVV-L 328 (1338)
Q Consensus 250 l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~-~ 328 (1338)
+++++++.+++..++..++.++..+...+.++..+++.....+..+++++++ ++.+..+ +.+.++|++..+..++. .
T Consensus 149 l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 226 (547)
T PRK10522 149 MLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAE-YVFENEYEPDAQEYRHHII 226 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHH-HHHHHHHhHHHHHHHhhhH
Confidence 8888777776666666667777777777777777777777777777888886 4444321 12234444444333221 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 329 HDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSG 408 (1338)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~ 408 (1338)
+..........+........++.+ .++++.... .+.+...++. ..+..+..++..+...+..++....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~------~~~~~~~~pl~~l~~~~~~~~~~~~ 294 (547)
T PRK10522 227 RADTFHLSAVNWSNIMMLGAIGLV----FYMANSLGW--ADTNVAATYS------LTLLFLRTPLLSAVGALPTLLSAQV 294 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhhc--CChHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111211211111100000111111 112222111 1122111111 1122244678888888889999999
Q ss_pred HHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHH
Q 000711 409 YADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLF 488 (1338)
Q Consensus 409 ~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl 488 (1338)
+.+|+.++++.+++.+. .. . . ..+..+.++++||+|.||+++++|+|+||++++||+++|+||||||||||+
T Consensus 295 a~~ri~~l~~~~~~~~~-~~--~--~---~~~~~~~i~~~~v~f~y~~~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~ 366 (547)
T PRK10522 295 AFNKLNKLALAPYKAEF-PR--P--Q---AFPDWQTLELRNVTFAYQDNGFSVGPINLTIKRGELLFLIGGNGSGKSTLA 366 (547)
T ss_pred HHHHHHHHhcccccccc-cc--c--c---ccCcCceEEEEEEEEEeCCCCeEEecceEEEcCCCEEEEECCCCCCHHHHH
Confidence 99999998654322110 00 0 0 001124699999999998767899999999999999999999999999999
Q ss_pred HHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCch
Q 000711 489 RVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY 562 (1338)
Q Consensus 489 ~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 562 (1338)
++|+|+++|++|+|.++|.+ .+++++++||||+|++|++|+++| +. ..+++++.++++.+++++
T Consensus 367 ~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~-------~~~~~~~~~~~~~~~l~~ 436 (547)
T PRK10522 367 MLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GK-------PANPALVEKWLERLKMAH 436 (547)
T ss_pred HHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cC-------chHHHHHHHHHHHcCCch
Confidence 99999999999999999975 245788999999999999999998 11 245678889999999887
Q ss_pred HHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH
Q 000711 563 LLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV 638 (1338)
Q Consensus 563 ~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~ 638 (1338)
..+. +.+. ..|.+||||||||++||||++++|+++|||||||+||+++++.+++.+.+ .++|+|+||||++.+
T Consensus 437 ~~~~-~~~~--~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~ 513 (547)
T PRK10522 437 KLEL-EDGR--ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYF 513 (547)
T ss_pred hhhc-cccC--CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHH
Confidence 6653 2211 13679999999999999999999999999999999999999999887642 489999999999999
Q ss_pred hhcceEEEccCC
Q 000711 639 AFHDVVLSLDGE 650 (1338)
Q Consensus 639 ~~~d~i~~l~~~ 650 (1338)
+.+|+|++++++
T Consensus 514 ~~~d~i~~l~~G 525 (547)
T PRK10522 514 IHADRLLEMRNG 525 (547)
T ss_pred HhCCEEEEEECC
Confidence 999999999873
No 100
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2.6e-50 Score=455.63 Aligned_cols=503 Identities=19% Similarity=0.208 Sum_probs=339.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAF-LRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHT 185 (1338)
Q Consensus 107 l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~R~~lt~~l~~ 185 (1338)
++.+.+++.+...+.+..|...=+.||... .+..+.... ..++++...++..+..+++.++-++.-.++...+..
T Consensus 25 ~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~TLv~----Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~ 100 (580)
T COG4618 25 FIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRSVPTLVM----LTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNG 100 (580)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCcchHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 334444455555566666666667777654 455555332 233333444455667777877777777778888877
Q ss_pred HHhcccccccccccCCCCCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHH---HHHHHHHhchhhHHHHHHHHHHHHH
Q 000711 186 RYFENMAYYKISHVDGRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLL---YTWRLCSYASPKYVFWILAYVLGAG 262 (1338)
Q Consensus 186 ~~~~~~~~~~~~~~d~~~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~---~~~~l~~~~~~~l~~~~l~~~~~~~ 262 (1338)
+.|......++.-. ..+ ...-.-+|.+.+++.+.. ..+.++++.-+ |.. +++.+.|.+.+++++.+++..
T Consensus 101 ~v~~a~~~~~l~~~--~~g-~~~Q~LrDL~qvR~Fltg---~g~~A~fDaPW~P~yl~-v~fl~Hp~lG~~a~~ga~iLv 173 (580)
T COG4618 101 PVFAASFSAPLLRR--GSG-DGLQPLRDLDQVRQFLTG---TGLTAFFDAPWMPLYLA-VIFLFHPWLGLIALAGAIILV 173 (580)
T ss_pred HHHHHHHhhHHhhc--CCC-ccccchhhHHHHHHHHcC---CCcchhcCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 77765543333211 111 122345677765443322 13334444322 211 222345655555544333222
Q ss_pred HHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 263 TMMRNFSPAF-GKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFL 341 (1338)
Q Consensus 263 ~~~~~~~~~~-~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (1338)
.+. ++.-.. ++-..+..+.....+...+..+.|+|.|++.|......++|.+...+......+.--.+..++...-.+
T Consensus 174 ~la-~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~ 252 (580)
T COG4618 174 VLA-LLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRAL 252 (580)
T ss_pred HHH-HHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 222 121111 111122222333334455566669999999999999999999887776665444322222223222222
Q ss_pred HHHHHHHHHHHHHHHhHhcccccC-CcchhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000711 342 LKYLGATVAVILIIEPFFAGNLKP-DTSTLGRAKMLSNLRYHTSV-IISLFQSLGTLSISSRRLNRLSGYADRIHELMVI 419 (1338)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~g~~~~~~~~~~~~~~-~~~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~~~ 419 (1338)
...+.. .++. .+..+.. +..|.|. +++. ++ +.....++-.....++.+.....+.+|+.+++..
T Consensus 253 Rm~lQs---~iLg----~GA~Lvi~ge~t~G~--mIA~-----SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~ 318 (580)
T COG4618 253 RMALQS---AVLG----LGAWLVIKGEITPGM--MIAG-----SILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAE 318 (580)
T ss_pred HHHHHH---HHHh----cceeeEEcCcCCcch--hhHH-----HHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222211 1111 1222221 2234442 2221 11 2234457777778889999999999999999987
Q ss_pred hhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCC
Q 000711 420 SRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV 498 (1338)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~ 498 (1338)
.++.... . ..+.+.+.+.+|++++..|+. +++++++||++++||.++|+||||||||||.|+|.|.|+|.
T Consensus 319 ~p~~~~~---m------~LP~P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~ 389 (580)
T COG4618 319 LPAAAER---M------PLPAPQGALSVERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPT 389 (580)
T ss_pred CccccCC---C------CCCCCCceeeEeeeeecCCCCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccC
Confidence 6543210 0 112236789999999988764 69999999999999999999999999999999999999999
Q ss_pred ccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCcc
Q 000711 499 SGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKE 572 (1338)
Q Consensus 499 ~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 572 (1338)
+|.|++||.+ +++.++|||+||+--+|+|||.|||+-..+ +.+++++.++.+.++.|+++-++|++++
T Consensus 390 ~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~------~~d~~kIieAA~lAgvHelIl~lP~GYd 463 (580)
T COG4618 390 SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGE------EADPEKVIEAARLAGVHELILRLPQGYD 463 (580)
T ss_pred CCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccc------cCCHHHHHHHHHHcChHHHHHhCcCCcc
Confidence 9999999976 345689999999999999999999985432 3577889999999999999999999888
Q ss_pred cc---CCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHH---ccCCeEEEEecChhhHhhcceEEE
Q 000711 573 IN---WGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALVAFHDVVLS 646 (1338)
Q Consensus 573 ~~---~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~---~~~~t~i~itH~~~~~~~~d~i~~ 646 (1338)
+. .|..|||||||||+||||||.+|.+++||||-|+||.+.|..+.+.+. +.|.|+|+||||++.+..+|+|++
T Consensus 464 T~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilv 543 (580)
T COG4618 464 TRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILV 543 (580)
T ss_pred CccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeee
Confidence 74 578999999999999999999999999999999999999999998764 569999999999999999999999
Q ss_pred ccCC
Q 000711 647 LDGE 650 (1338)
Q Consensus 647 l~~~ 650 (1338)
|+++
T Consensus 544 l~~G 547 (580)
T COG4618 544 LQDG 547 (580)
T ss_pred ecCC
Confidence 9874
No 101
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=3.1e-50 Score=546.18 Aligned_cols=461 Identities=17% Similarity=0.219 Sum_probs=319.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000711 166 YITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCS 244 (1338)
Q Consensus 166 ~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 244 (1338)
++...+..+.-.....+++.+.++++.+.|++||+.. .++..+|+++|++.+.+.+...+..++..++..+.+.+. +.
T Consensus 943 ~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~-i~ 1021 (1490)
T TIGR01271 943 FFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFV-VS 1021 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 3344444444444888999999999999999999875 679999999999998888777766666655544443333 23
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 000711 245 YASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHM 324 (1338)
Q Consensus 245 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~ 324 (1338)
+++|.+++.++..+++..++..+..+....+........+.......+...+.++|++|+.|+.+.+++.+..+.....+
T Consensus 1022 ~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~ 1101 (1490)
T TIGR01271 1022 VLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANW 1101 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHH
Confidence 44554433222221111111122222222222222222233444555666799999999999999877776666444333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 325 RVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLN 404 (1338)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~ 404 (1338)
........|.+....++...+...+ .++. ++... .+.+.+|.. + .+...+..++..+...+..+.
T Consensus 1102 ~~~~~~~~wl~~~~~~i~~~~~~~~-~~l~----~~~~~-~~~g~~g~~--l-------~~~~~l~~~l~~l~~~~~~le 1166 (1490)
T TIGR01271 1102 FLYLSTLRWFQMRIDIIFVFFFIAV-TFIA----IGTNQ-DGEGEVGII--L-------TLAMNILSTLQWAVNSSIDVD 1166 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHH----HHHhc-CCccHHHHH--H-------HHHHHHHHHHHHHHHHHHHHH
Confidence 3333333344433332211111111 1111 11111 111223321 1 122333445566666777888
Q ss_pred HHHHHHHHHHHHHHhhhhccccCCCC-----------CCCCCCCCcCCCCcEEEEeEEEEcCC-CCeeeeeeeEEEeCCC
Q 000711 405 RLSGYADRIHELMVISRELSIEDKSP-----------QRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGS 472 (1338)
Q Consensus 405 ~~~~~~~ri~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~~sl~i~~G~ 472 (1338)
....+.+|+.++++.+++........ ........++..+.|+|+||++.|++ .+++|+|+||+|++||
T Consensus 1167 ~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~Ge 1246 (1490)
T TIGR01271 1167 GLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQ 1246 (1490)
T ss_pred HHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCC
Confidence 88999999999987655432110000 00000011233578999999999975 4789999999999999
Q ss_pred EEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCC
Q 000711 473 NLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPL 546 (1338)
Q Consensus 473 ~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~ 546 (1338)
+++|||+||||||||+++|+|+++ .+|+|.+||.+ .++|++++||||+|++|+||||+||.... ..
T Consensus 1247 kvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-------~~ 1318 (1490)
T TIGR01271 1247 RVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-------QW 1318 (1490)
T ss_pred EEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-------CC
Confidence 999999999999999999999997 79999999976 34788999999999999999999995431 35
Q ss_pred CHHHHHHHHHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc
Q 000711 547 THGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA 623 (1338)
Q Consensus 547 ~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~ 623 (1338)
+|++++++|+.+++.+++.++|.+.++ +.|.+||||||||++|||||+++|+|||||||||+||.++++.|++.+++
T Consensus 1319 tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~ 1398 (1490)
T TIGR01271 1319 SDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQ 1398 (1490)
T ss_pred CHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 789999999999999999998865443 46789999999999999999999999999999999999999999999986
Q ss_pred --cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 624 --MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 624 --~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
.++|+|+||||++++..+|+|++|+++
T Consensus 1399 ~~~~~TvI~IaHRl~ti~~~DrIlvL~~G 1427 (1490)
T TIGR01271 1399 SFSNCTVILSEHRVEALLECQQFLVIEGS 1427 (1490)
T ss_pred HcCCCEEEEEecCHHHHHhCCEEEEEECC
Confidence 489999999999999999999999873
No 102
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=9.1e-51 Score=507.36 Aligned_cols=260 Identities=13% Similarity=0.163 Sum_probs=209.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCC-CCCCCCCceEEeeeEEeCCCc----c
Q 000711 1039 VSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKW-NSTDYQDSISFSKLDIITPSQ----K 1113 (1338)
Q Consensus 1039 ~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w-p~~~~~g~I~f~nV~f~yp~~----~ 1113 (1338)
......++..+......+.....+.+|+.++.+.++++++....+... .... +.....+.|+|+||+|.||+. +
T Consensus 277 ~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~ 355 (555)
T TIGR01194 277 LLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDAD-NVLLLAHDKSVDSIELKDVHMNPKAPEGSEG 355 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccc-cccccccCCCCceEEEEEEEEEeCCCCCCcC
Confidence 345567888888888889999999999999876432211100000000 0000 001124689999999999753 4
Q ss_pred ccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHH
Q 000711 1114 LLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQ 1191 (1338)
Q Consensus 1114 ~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReN 1191 (1338)
++|+|+||+|++||++|||||||||||||+++|.|+|+|++|+|.+||.|+++. ..+|.++++|||||++|++|+++|
T Consensus 356 ~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n 435 (555)
T TIGR01194 356 FALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPD 435 (555)
T ss_pred ceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhcc
Confidence 699999999999999999999999999999999999999999999999999987 345678999999999999999999
Q ss_pred hcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCChhHHHHHHHHHHhh
Q 000711 1192 IIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRLGMARLFF 1271 (1338)
Q Consensus 1192 L~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSgGQrQrlaiARAlL 1271 (1338)
+ .|... +++++++++.+++++.++.+|+||||. .+||||||||||||||++
T Consensus 436 ~-~~~~~------------------------~~~~~~~~~~~~l~~~~~~lp~g~~t~----~~LSgGq~qRlalaRall 486 (555)
T TIGR01194 436 E-GEHAS------------------------LDNAQQYLQRLEIADKVKIEDGGFSTT----TALSTGQQKRLALICAWL 486 (555)
T ss_pred c-ccchh------------------------HHHHHHHHHHcCCchhhcccccccCCc----ccCCHHHHHHHHHHHHHH
Confidence 6 24322 334555667777777888889999986 579999999999999999
Q ss_pred cCCCEEEeecCCCCCCHHHHHHHHHHH-H---hcCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1272 HKPKFGILDECTNATSVDVEEQLYRLA-K---DMGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1272 r~p~ILiLDEATSaLD~~te~~i~~~~-~---~~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
++|+|||||||||+||+++|+.+++.+ + ..++|+|+||||+++++.+|++++|++|+
T Consensus 487 ~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~ 547 (555)
T TIGR01194 487 EDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGC 547 (555)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCE
Confidence 999999999999999999999987633 2 35899999999999999999999997764
No 103
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-49 Score=508.88 Aligned_cols=472 Identities=21% Similarity=0.269 Sum_probs=349.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCC-CCCchhHHHccHHHHHHHHHHHH
Q 000711 147 ISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELV 225 (1338)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~-~~n~~qRit~Di~~~~~~~~~l~ 225 (1338)
+..+.+++++.+++..+..+.--..+++ -.+++|++.++++.+-||+|||.. .|...+|.+.|++.+...+...+
T Consensus 861 ~~vY~~l~~~~~~~~~~rs~~~~~~~l~----aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~ 936 (1381)
T KOG0054|consen 861 LGVYALLGVASSLLTLLRSFLFAKGGLK----ASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTL 936 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHH
Confidence 4445555555555555555666666666 778899999999999999999976 67899999999999888777766
Q ss_pred HHhHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----HHHHHHHhHHHHH
Q 000711 226 QDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQ----LHSRLRTHAESIA 301 (1338)
Q Consensus 226 ~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~----~~~~i~~~~e~I~ 301 (1338)
..++..++..+... .+..+..|..++.++.. +++..++.+.+.+..++..+.|+.-|. ...+...+.-+|+
T Consensus 937 ~~~~~~~~~~l~~~-~vi~~~~P~fli~~~pl----~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIR 1011 (1381)
T KOG0054|consen 937 EFFLQSLLNVLGIL-VVISYVTPWFLIAIIPL----GVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIR 1011 (1381)
T ss_pred HHHHHHHHHHHHHH-HHhhHHhHHHHHHHHHH----HHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceee
Confidence 66666555443322 22233344433332222 222333455555555666667765553 3455556888999
Q ss_pred HhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccccCCcchhhHHHHHHHHHH
Q 000711 302 FYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRY 381 (1338)
Q Consensus 302 ~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~ 381 (1338)
+|+.|+++.++...+-+...+.+......++|+++-..++...+..+.++++++ ..... .+.+..|.
T Consensus 1012 Af~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl---~~~~~-~~~g~vGL--------- 1078 (1381)
T KOG0054|consen 1012 AFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVL---LPSGL-ISPGLVGL--------- 1078 (1381)
T ss_pred eccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccCCC-CCcchHHH---------
Confidence 999999998766666665555555556667777776665533332222222221 11111 11222331
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCC-CCee
Q 000711 382 HTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT-GNVL 460 (1338)
Q Consensus 382 ~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~ 460 (1338)
..++..++.+.+.++......+..-..+.+||.|..+.++|.+.. .+...+...++..|.|+|+|++..|.. ..++
T Consensus 1079 slsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~---~~~~~pp~~WP~~G~I~f~~~~~RYrp~lp~V 1155 (1381)
T KOG0054|consen 1079 SLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLE---IEESRPPPSWPSKGEIEFEDLSLRYRPNLPLV 1155 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCC---CcCCCCCCCCCCCCeEEEEEeEEEeCCCCcch
Confidence 123344444556666667777888889999999999876651111 111112334667899999999998854 4789
Q ss_pred eeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhc
Q 000711 461 VENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLI 534 (1338)
Q Consensus 461 l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~ 534 (1338)
|+|+||+|+|||+++|||++|||||||..+|-++.+|.+|+|.+||.| .++|++++.+||+|.+|+||+|.|+-
T Consensus 1156 Lk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLD 1235 (1381)
T KOG0054|consen 1156 LKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLD 1235 (1381)
T ss_pred hcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccC
Confidence 999999999999999999999999999999999999999999999987 47899999999999999999999984
Q ss_pred CCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCc--c-ccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCH
Q 000711 535 YPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEK--E-INWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTT 611 (1338)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--~-~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~ 611 (1338)
-- +..+|++++++|+.|+|.+.+.++|.+. . .+.|.++|-||||.++|||||+++++||+|||||+++|+
T Consensus 1236 Pf-------~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~ 1308 (1381)
T KOG0054|consen 1236 PF-------DEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDP 1308 (1381)
T ss_pred cc-------cccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCCh
Confidence 32 3468999999999999999999988643 2 367999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHc--cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 612 DMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 612 ~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
++...|++.+++ .++|||.|+||++++-++|+|+|||++
T Consensus 1309 ~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G 1349 (1381)
T KOG0054|consen 1309 ETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAG 1349 (1381)
T ss_pred HHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCC
Confidence 999999999998 499999999999999999999999974
No 104
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.2e-49 Score=436.11 Aligned_cols=445 Identities=19% Similarity=0.237 Sum_probs=306.9
Q ss_pred HHHHHHHHhcccccccccccCCCCCCchhHHHc----cHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhchhhHHHHHH
Q 000711 180 TKLIHTRYFENMAYYKISHVDGRITHPEQRLAS----DVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWIL 255 (1338)
Q Consensus 180 t~~l~~~~~~~~~~~~~~~~d~~~~n~~qRit~----Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l 255 (1338)
++.+.-+-|.|+..+.+.|+-++...+.+|..+ -|+.+... .+...+..++........++...+|.+.++++
T Consensus 14 ~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~---~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~t~ 90 (497)
T COG5265 14 VRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRW---ILFNILPTLVEISLVAVILWRVYGWWFALTTL 90 (497)
T ss_pred HHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHH---HHHHhhHHHHHHHHHHHHHHhhcccHHHHHHH
Confidence 334444556677777777765555555555432 33333222 23333333443333333334445666666554
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHH--HHHHHHHH-HHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 256 AYVLGAGTMMRNFSPAFGKLMSKEQ--QLEGEYRQ-LHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHW 332 (1338)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~l~~~~~--~~e~~~r~-~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~ 332 (1338)
+.+.+..+++....-. +...+.+ +...+... ....+. |-|+||.|+.|+.|..+.....+...+...+......
T Consensus 91 vtv~lY~~ftv~~s~w--r~~~rr~~n~aDs~a~~~aidsLl-nfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~ 167 (497)
T COG5265 91 VTVILYLLFTVIVSDW--RTDFRRLMNNADSDANAKAIDSLL-NFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLL 167 (497)
T ss_pred HHHHHHHHhheeehhh--hHHHHHhhhhhhhHHHHHHHHHHh-hhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHH
Confidence 4443332222111111 1111222 22222222 233343 8899999999999985544433333322222212222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--HhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 333 WFGMIQDFLLKYLGATVAVILIIEP--FFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYA 410 (1338)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~ 410 (1338)
++.+.+..+ ++.....++...+ +..|. .|.|...+. ..++.+...++.-+..+++++.+...-.
T Consensus 168 ~Ln~gQ~~I---~~~~l~~~m~~s~~~v~~g~-----~TvgD~V~~------Nall~qls~Plnflg~~Yrei~q~ltdm 233 (497)
T COG5265 168 VLNFGQTAI---FSTGLRVMMTMSALGVEEGQ-----LTVGDLVNV------NALLFQLSIPLNFLGFSYREIRQALTDM 233 (497)
T ss_pred HHHHhhHHH---HHHHHHHHHhhcHHHHhhcc-----CCchhHHhH------HHHHhhhhhhhhhhHHHHHHHHHhhhhH
Confidence 333333332 1222222222211 22233 356654332 2345566678888889999999999999
Q ss_pred HHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHH
Q 000711 411 DRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRV 490 (1338)
Q Consensus 411 ~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~ 490 (1338)
++.+++++.+.+.......+ ...+...+.+.|+||+|.|...+++|+++||++++|+.++|+||+|+||||++++
T Consensus 234 e~mfdLl~~~~~v~d~pda~-----~L~~~~~g~v~F~~V~F~y~~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rl 308 (497)
T COG5265 234 EKMFDLLDVEAEVSDAPDAP-----PLWPVRLGAVAFINVSFAYDPRRPILNGISFTIPLGKTVAIVGESGAGKSTILRL 308 (497)
T ss_pred HHHHHhhccchhhccCCCCc-----cccccccceEEEEEEEeeccccchhhcCccccccCccEEEEEeCCCCcHHHHHHH
Confidence 99999988766654211110 0001235779999999999888999999999999999999999999999999999
Q ss_pred HcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHH
Q 000711 491 LGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLL 564 (1338)
Q Consensus 491 l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 564 (1338)
|.++|++++|.|.+||+| ..+|+.||.|||+..||+.|+..||.|+.+. .+++++..+++.+.+++++
T Consensus 309 lfRFyD~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~------at~eev~aaa~~aqi~~fi 382 (497)
T COG5265 309 LFRFYDVNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPD------ATAEEVGAAAEAAQIHDFI 382 (497)
T ss_pred HHHHhCCcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCcc------ccHHHHHHHHHHhhhhHHH
Confidence 999999999999999987 3578899999999999999999999999754 6889999999999999999
Q ss_pred hcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHh
Q 000711 565 DRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA 639 (1338)
Q Consensus 565 ~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~ 639 (1338)
..+|.+.++ ++|-.||||||||+||||+++++|+|++|||+|||||.++|+.|+..+++ .|+|.++|+||++++-
T Consensus 383 ~~lP~gy~t~VgerglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~ 462 (497)
T COG5265 383 QSLPEGYDTGVGERGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTII 462 (497)
T ss_pred HhCchhhhcccchheeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhcc
Confidence 999987665 46788999999999999999999999999999999999999999999986 5999999999999999
Q ss_pred hcceEEEccCCCceEEee
Q 000711 640 FHDVVLSLDGEGEWRVHD 657 (1338)
Q Consensus 640 ~~d~i~~l~~~g~~~~~~ 657 (1338)
.+|.|++|+++ ..++.
T Consensus 463 ~adeiivl~~g--~i~er 478 (497)
T COG5265 463 DADEIIVLDNG--RIVER 478 (497)
T ss_pred CCceEEEeeCC--EEEec
Confidence 99999999973 34443
No 105
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.4e-48 Score=441.49 Aligned_cols=338 Identities=24% Similarity=0.319 Sum_probs=249.3
Q ss_pred HHHHhhHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhhhHHHHHHHHHHHHhhcccchhhhc
Q 000711 945 ERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVST 1024 (1338)
Q Consensus 945 ~~~~~~~e~i~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1024 (1338)
+....|+|.|++.+-.....++..+...+.++......-+...++.....+- .+......++.-|.++... .+
T Consensus 202 ~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~R-m~lQs~iLg~GA~Lvi~ge------~t 274 (580)
T COG4618 202 DATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALR-MALQSAVLGLGAWLVIKGE------IT 274 (580)
T ss_pred HHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH-HHHHHHHHhcceeeEEcCc------CC
Confidence 4455588999998876666666555555555443322222222222111111 1111111122112111110 12
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEee
Q 000711 1025 QGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSK 1104 (1338)
Q Consensus 1025 ~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~n 1104 (1338)
+|.+... ....+..+.++-......+++.....+-.|+.++++..+...+. .|-+.++|.+..++
T Consensus 275 ~G~mIA~----SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~-----------m~LP~P~g~L~Ve~ 339 (580)
T COG4618 275 PGMMIAG----SILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAER-----------MPLPAPQGALSVER 339 (580)
T ss_pred cchhhHH----HHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC-----------CCCCCCCceeeEee
Confidence 2222111 11234566778888888888988889999999987664332221 11222479999999
Q ss_pred eEEeCCC-ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCC
Q 000711 1105 LDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRP 1181 (1338)
Q Consensus 1105 V~f~yp~-~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP 1181 (1338)
+++.-|+ .+|+|+|+||.++|||-+||+||||||||||.++|.|.|+|.+|.|.+||-|++.. +.+.++|+|.|||-
T Consensus 340 l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdV 419 (580)
T COG4618 340 LTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDV 419 (580)
T ss_pred eeecCCCCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccc
Confidence 9998776 57999999999999999999999999999999999999999999999999999998 45677899999999
Q ss_pred CCCCCCHHHHhc-CC-CchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-cccCCCCh
Q 000711 1182 YTCLGTLRDQII-YP-LSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSL 1258 (1338)
Q Consensus 1182 ~LF~GTIReNL~-~p-~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSg 1258 (1338)
-||+|||.|||+ +. +...+.+++|++.|+.|| ++-++|+||||.+ +.|..|||
T Consensus 420 eLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHe------------------------lIl~lP~GYdT~iG~~G~~LSg 475 (580)
T COG4618 420 ELFDGTIAENIARFGEEADPEKVIEAARLAGVHE------------------------LILRLPQGYDTRIGEGGATLSG 475 (580)
T ss_pred eecCCcHHHHHHhccccCCHHHHHHHHHHcChHH------------------------HHHhCcCCccCccCCCCCCCCc
Confidence 999999999996 22 445566788888876533 4556689999998 47889999
Q ss_pred hHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHH---HhcCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1259 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLA---KDMGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1259 GQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~---~~~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
||||||++|||+..+|++++||||-|+||.+-|.++.+.+ +..|+|+|+||||++.+...|++++|.+|.
T Consensus 476 GQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~ 548 (580)
T COG4618 476 GQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGR 548 (580)
T ss_pred hHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCCh
Confidence 9999999999999999999999999999999999887765 347999999999999999999999998764
No 106
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=8.5e-48 Score=480.78 Aligned_cols=246 Identities=17% Similarity=0.160 Sum_probs=194.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHhhcCCCCCCccCCccCCCCCCCCCCceEEeeeEEeCCCccccccccce
Q 000711 1042 SFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTF 1121 (1338)
Q Consensus 1042 ~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~~~~~~~~~~~~~~~~~wp~~~~~g~I~f~nV~f~yp~~~~vL~~lsf 1121 (1338)
...++..+......+.....+.+|+.++.+.+++.+. ... . +.+ ..+.|+|+||+|+||+.+++|+|+||
T Consensus 275 ~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~----~~~-~----~~~-~~~~i~~~~v~f~y~~~~~~l~~i~~ 344 (547)
T PRK10522 275 LRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEF----PRP-Q----AFP-DWQTLELRNVTFAYQDNGFSVGPINL 344 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc----ccc-c----ccC-cCceEEEEEEEEEeCCCCeEEecceE
Confidence 3456777777778888888999999998543221110 000 0 011 13579999999999977789999999
Q ss_pred EEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCHHHHhcCCCchH
Q 000711 1122 EIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSRE 1199 (1338)
Q Consensus 1122 ~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~ 1199 (1338)
+|+|||++|||||||||||||+++|+|+|+|++|+|.+||.|+++. ..+|++++||||||++|+||+++| .+...
T Consensus 345 ~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n--~~~~~- 421 (547)
T PRK10522 345 TIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE--GKPAN- 421 (547)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc--cCchH-
Confidence 9999999999999999999999999999999999999999999876 356778999999999999999998 12212
Q ss_pred HHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCChhHHHHHHHHHHhhcCCCEEEe
Q 000711 1200 EAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGIL 1279 (1338)
Q Consensus 1200 ~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiL 1279 (1338)
++.+.++++.+++.+.++. ++|.. .|.+||||||||++||||++++|+||||
T Consensus 422 -----------------------~~~~~~~~~~~~l~~~~~~-~~~~~----~G~~LSgGq~qRl~lARal~~~~~ilil 473 (547)
T PRK10522 422 -----------------------PALVEKWLERLKMAHKLEL-EDGRI----SNLKLSKGQKKRLALLLALAEERDILLL 473 (547)
T ss_pred -----------------------HHHHHHHHHHcCCchhhhc-cccCC----CCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 2233445555555443332 22211 2678999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHH----hcCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1280 DECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1280 DEATSaLD~~te~~i~~~~~----~~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
|||||+||.++|+.+.+.+. ..++|+|+||||+++++.+|+++++++|+
T Consensus 474 DE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~ 526 (547)
T PRK10522 474 DEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQ 526 (547)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCE
Confidence 99999999999998876543 24899999999999999999999997764
No 107
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-48 Score=455.15 Aligned_cols=199 Identities=28% Similarity=0.374 Sum_probs=165.2
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-------cccccE
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEI 515 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i 515 (1338)
..++++|++++|+ +.++|+|+||++.+||+++++|.||+|||||+|+|+|.|+|++|+|.++|... .....|
T Consensus 7 ~ll~~~~i~K~Fg-gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~GI 85 (500)
T COG1129 7 PLLELRGISKSFG-GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAGI 85 (500)
T ss_pred ceeeeecceEEcC-CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCCc
Confidence 3689999999996 57899999999999999999999999999999999999999999999999641 234579
Q ss_pred EEEecCCCCC-CCCHHHHhcCCCCCCcccCCCC----HHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000711 516 FYVPQRPYTA-VGTLRDQLIYPLTSDQEVEPLT----HGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1338)
Q Consensus 516 ~~v~Q~~~l~-~~tl~eni~~~~~~~~~~~~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1338)
..|+|++.++ +.||.|||.++..........+ .++..++|+.+++....+.. -.+||+||||.|+||
T Consensus 86 ~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~--------v~~LsiaqrQ~VeIA 157 (500)
T COG1129 86 ATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTL--------VGDLSIAQRQMVEIA 157 (500)
T ss_pred EEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhh--------hhhCCHHHHHHHHHH
Confidence 9999999875 5699999988765432111122 34456677777775222222 268999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHH---ccCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 591 Ral~~~p~illLDEpts~LD~~~~~~i~~~l~---~~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
||+..+++++|||||||+|+....+.+++.++ +.|.++|+||||++.+ +.||+|.+|.++
T Consensus 158 rAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG 221 (500)
T COG1129 158 RALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDG 221 (500)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCC
Confidence 99999999999999999999998888887654 5699999999999877 589999999863
No 108
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=5e-46 Score=423.28 Aligned_cols=198 Identities=28% Similarity=0.368 Sum_probs=169.0
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-------ccccccEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-------SDLNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-------~~~~~~i~ 516 (1338)
.++++++++.|| +..+++|+||+|++||+.+|+|+||+|||||+++|.|+|+|++|+|.++|+. +..+..||
T Consensus 4 ~l~~~~itK~f~-~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~GIG 82 (501)
T COG3845 4 ALEMRGITKRFP-GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLGIG 82 (501)
T ss_pred eEEEeccEEEcC-CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcCCc
Confidence 589999999998 7889999999999999999999999999999999999999999999999975 23456799
Q ss_pred EEecCCCCCC-CCHHHHhcCCCCCCcc---cCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000711 517 YVPQRPYTAV-GTLRDQLIYPLTSDQE---VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1338)
Q Consensus 517 ~v~Q~~~l~~-~tl~eni~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1338)
+|+|++.+++ .|+.|||..+...... ......+++.++.+..|++-..+... ..||-|||||+.|-+|
T Consensus 83 MVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~~~V--------~dLsVG~qQRVEIlKa 154 (501)
T COG3845 83 MVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPDAKV--------ADLSVGEQQRVEILKA 154 (501)
T ss_pred EEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCcccee--------ecCCcchhHHHHHHHH
Confidence 9999998865 5999999998754210 01123456777788888765544433 5799999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHH---ccCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 593 FYHKPKFAILDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 593 l~~~p~illLDEpts~LD~~~~~~i~~~l~---~~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
||++|++||||||||-|-|...+++++.++ +.|+|||+|||++..+. .||++-+|.++
T Consensus 155 Lyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~G 216 (501)
T COG3845 155 LYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRG 216 (501)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCC
Confidence 999999999999999999999999888765 46999999999999875 69999999863
No 109
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-44 Score=370.94 Aligned_cols=198 Identities=28% Similarity=0.379 Sum_probs=173.0
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-------ccccccEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-------SDLNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-------~~~~~~i~ 516 (1338)
.|+++||+++|. +..+|+|+|++|++||.++|+||||||||||+|+|.|+.+|++|+|.++|.+ ..+|+++|
T Consensus 2 mi~i~~l~K~fg-~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vG 80 (240)
T COG1126 2 MIEIKNLSKSFG-DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVG 80 (240)
T ss_pred eEEEEeeeEEeC-CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcC
Confidence 589999999994 6789999999999999999999999999999999999999999999999953 23678999
Q ss_pred EEecCCCCCC-CCHHHHhcCCCCC-CcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 517 YVPQRPYTAV-GTLRDQLIYPLTS-DQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 517 ~v~Q~~~l~~-~tl~eni~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
+|+|+..||+ .|+.||+.++... .........+...+.|+.+||.+-.+.+| .+||||||||+||||||.
T Consensus 81 mVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP--------~qLSGGQqQRVAIARALa 152 (240)
T COG1126 81 MVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP--------AQLSGGQQQRVAIARALA 152 (240)
T ss_pred eecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc--------cccCcHHHHHHHHHHHHc
Confidence 9999999886 5999999986421 11111223456678899999999999999 799999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHH---HccCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKV---RAMGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l---~~~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
.+|+++++|||||||||+...++.+.+ .+.|.|.|+|||.+.+.+ .+|+|+.|+++
T Consensus 153 M~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G 212 (240)
T COG1126 153 MDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQG 212 (240)
T ss_pred CCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCC
Confidence 999999999999999999998877765 456999999999999986 68999999973
No 110
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-43 Score=370.77 Aligned_cols=199 Identities=28% Similarity=0.359 Sum_probs=175.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-ccccccEEEEecCC
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQRP 522 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-~~~~~~i~~v~Q~~ 522 (1338)
.+++++|++.|++ ..+|+|+||+|++||+++|+||||||||||||+|+|+.+|++|+|.++|.. .....+++||+|++
T Consensus 3 ~l~i~~v~~~f~~-~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ~~ 81 (248)
T COG1116 3 LLEIEGVSKSFGG-VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQED 81 (248)
T ss_pred eEEEEeeEEEeCc-eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEeccC
Confidence 5889999999965 889999999999999999999999999999999999999999999999865 33456899999999
Q ss_pred CCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000711 523 YTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAI 601 (1338)
Q Consensus 523 ~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ill 601 (1338)
.+++ -|++||+.++............+++.++|+.+||.++.+++| .+||||||||+||||||+.+|++|+
T Consensus 82 ~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P--------~qLSGGMrQRVaiARAL~~~P~lLL 153 (248)
T COG1116 82 ALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP--------HQLSGGMRQRVAIARALATRPKLLL 153 (248)
T ss_pred cccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc--------cccChHHHHHHHHHHHHhcCCCEEE
Confidence 8876 599999999876432222334567899999999999999999 7999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHH----ccCCeEEEEecChhhH-hhcceEEEccCCC
Q 000711 602 LDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPALV-AFHDVVLSLDGEG 651 (1338)
Q Consensus 602 LDEpts~LD~~~~~~i~~~l~----~~~~t~i~itH~~~~~-~~~d~i~~l~~~g 651 (1338)
||||++|||..|+..+++.+. +.++|+++|||+.+.. ..+|+|++|.++.
T Consensus 154 lDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P 208 (248)
T COG1116 154 LDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRP 208 (248)
T ss_pred EcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCC
Confidence 999999999999998888664 4589999999999865 5799999998753
No 111
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-43 Score=379.46 Aligned_cols=199 Identities=27% Similarity=0.375 Sum_probs=178.9
Q ss_pred cEEEEeEEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC---------cc
Q 000711 444 YIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---------SD 510 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~----~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~---------~~ 510 (1338)
+|++++|++.|+.+ .++++|+||+|++||+.+|+|+||+|||||+|++.++-.|++|+|.++|.+ ..
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 47999999988752 479999999999999999999999999999999999999999999999965 23
Q ss_pred ccccEEEEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHH
Q 000711 511 LNKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1338)
Q Consensus 511 ~~~~i~~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1338)
.|++||++||++.|+. .|+.+|+.||..-....+..-..++.+.|+.+||.+..+++| .+|||||||||+|
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP--------~qLSGGQKQRVaI 152 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP--------AQLSGGQKQRVAI 152 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc--------hhcCcchhhHHHH
Confidence 5789999999999887 699999999986544323334567889999999999999999 7999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 590 ARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
||||..+|++|+.|||||||||++.+.|.+.|++ .|.|+++|||.++.++ .||++.+|+++
T Consensus 153 ARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G 218 (339)
T COG1135 153 ARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQG 218 (339)
T ss_pred HHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCC
Confidence 9999999999999999999999999999998864 5999999999999986 79999999973
No 112
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=6e-41 Score=381.89 Aligned_cols=184 Identities=22% Similarity=0.242 Sum_probs=137.7
Q ss_pred CceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEE
Q 000711 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYV 1177 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~V 1177 (1338)
..|.|+||+|.|++.+.++++++|-|.++++||+|||+|+|||||++++.+...|..|.|..... .++++-
T Consensus 388 pvi~~~nv~F~y~~~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H---------~~~~~y 458 (614)
T KOG0927|consen 388 PVIMVQNVSFGYSDNPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH---------NKLPRY 458 (614)
T ss_pred CeEEEeccccCCCCcchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc---------ccchhh
Confidence 36999999999998889999999999999999999999999999999999999999999863322 123322
Q ss_pred cCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1178 PQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1178 pQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
-|. .-+.++|-....+-...+.+. +-..+.+..++..+||... .++-.-.+||
T Consensus 459 ~Qh-------~~e~ldl~~s~le~~~~~~~~-----------~~~~e~~r~ilgrfgLtgd---------~q~~p~~~LS 511 (614)
T KOG0927|consen 459 NQH-------LAEQLDLDKSSLEFMMPKFPD-----------EKELEEMRSILGRFGLTGD---------AQVVPMSQLS 511 (614)
T ss_pred hhh-------hHhhcCcchhHHHHHHHhccc-----------cchHHHHHHHHHHhCCCcc---------ccccchhhcc
Confidence 222 223333222221211111110 1123456677777777421 1111235899
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHhcCCeEEEeccCCCCccc
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPF 1317 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~~~~TvI~IAHRl~~i~~ 1317 (1338)
+|||-|+++||.+++.|.+|+|||||++||.++...+.+.+.+..-+||+|+|..-+|.-
T Consensus 512 ~Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~~Ggvv~vSHDfrlI~q 571 (614)
T KOG0927|consen 512 DGQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEFPGGVVLVSHDFRLISQ 571 (614)
T ss_pred cccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhccCCceeeeechhhHHHH
Confidence 999999999999999999999999999999999999999998888899999999876643
No 113
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.2e-42 Score=345.42 Aligned_cols=198 Identities=26% Similarity=0.356 Sum_probs=176.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC---------cccccc
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---------SDLNKE 514 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~---------~~~~~~ 514 (1338)
+|+|+||++.|+++.++|+|+||+|++||++.|+||||||||||+|+|.+...|+.|+|.++|.+ .-+|++
T Consensus 1 mI~f~~V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 1 MIRFENVSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred CeeehhhhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 47999999999999889999999999999999999999999999999999999999999999976 136789
Q ss_pred EEEEecCCCC-CCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000711 515 IFYVPQRPYT-AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1338)
Q Consensus 515 i~~v~Q~~~l-~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1338)
||+|+|+.-+ ..-|+.||+.||..-.......-.+++.++|+.+||.+-...+| .+||||||||++||||+
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP--------~~LSGGEQQRvaIARAi 152 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP--------SQLSGGEQQRVAIARAI 152 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc--------cccCchHHHHHHHHHHH
Confidence 9999999875 45699999999976543333334567889999999999999999 69999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHhhc-ceEEEccC
Q 000711 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFH-DVVLSLDG 649 (1338)
Q Consensus 594 ~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~~~-d~i~~l~~ 649 (1338)
+++|++||.||||.+||++...+|++.+.+ .|.||++.||+.+++... .+++.+++
T Consensus 153 V~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~ 212 (223)
T COG2884 153 VNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALED 212 (223)
T ss_pred ccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeC
Confidence 999999999999999999999999888765 599999999999999754 56777765
No 114
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.5e-42 Score=365.43 Aligned_cols=198 Identities=30% Similarity=0.422 Sum_probs=170.4
Q ss_pred EEEEeEEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-c--------c-c
Q 000711 445 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-S--------D-L 511 (1338)
Q Consensus 445 i~~~~v~~~~~~~---~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-~--------~-~ 511 (1338)
++++||++.|..+ .++|+++||+|++||+++|+|||||||||||++|.|+..|++|.|.++|.+ . . .
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 5789999988654 379999999999999999999999999999999999999999999999964 1 1 2
Q ss_pred cccEEEEecCCCCC-CCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHh-cCCCCccccCCCCCChhHHHHHHH
Q 000711 512 NKEIFYVPQRPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLD-RYPPEKEINWGDELSLGEQQRLGM 589 (1338)
Q Consensus 512 ~~~i~~v~Q~~~l~-~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~~~~~~g~~LSgGqkQRlal 589 (1338)
+++||||+|+..|. ..|++|||.+|............++..++++.+|+++... +.| .+||||||||+||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p--------~eLSGGqqQRVAI 153 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKP--------SELSGGQQQRVAI 153 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCc--------hhcCHHHHHHHHH
Confidence 46799999998865 5699999997653322111123566788899999997777 667 6899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 590 ARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
||||+++|++++.||||++||.++.+.+++.+++ .|+|+|+|||++....+||+++.+.++
T Consensus 154 ARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG 218 (226)
T COG1136 154 ARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDG 218 (226)
T ss_pred HHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999998764 489999999999999999999999874
No 115
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=6.6e-42 Score=386.34 Aligned_cols=206 Identities=20% Similarity=0.221 Sum_probs=183.1
Q ss_pred CceEEeeeEEeCCC-ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccE
Q 000711 1098 DSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGI 1174 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~-~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i 1174 (1338)
|.|+|+||++.||+ .+++|+|+||+|++||++|||||||||||||+++|+|+++ .+|+|.+||.++... ..+|++|
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 57999999999974 5679999999999999999999999999999999999998 789999999999766 3456689
Q ss_pred EEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-ccc
Q 000711 1175 FYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWE 1253 (1338)
Q Consensus 1175 ~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g 1253 (1338)
+||||+|.+|++|+++|+++ ... ..++.++++++.++|...+...|+|+|+.+ +.|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~-~~~----------------------~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDP-YGK----------------------WSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred EEECCCcccchhhHHHHhhh-ccC----------------------CCHHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 99999999999999999962 210 123456777788888888888999999987 578
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDG 1327 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g 1327 (1338)
.+||+|||||+|||||++++|+||||||||++||.++++.+++.+++ .++|+|+|+||++++..+|++++|.+|
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEEN 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCC
Confidence 89999999999999999999999999999999999999999887764 489999999999998899999999665
No 116
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.5e-42 Score=357.06 Aligned_cols=197 Identities=27% Similarity=0.375 Sum_probs=172.2
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 517 (1338)
+|+|+||++.|. ++.+++|+||+|++||+++++|||||||||++|+|.++++|++|+|.++|.+ .++|++|||
T Consensus 1 MI~~~nvsk~y~-~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 1 MIEFENVSKRYG-NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred CceeeeeehhcC-CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 479999999995 6789999999999999999999999999999999999999999999999976 357899999
Q ss_pred EecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCc--hHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 518 VPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE--YLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 518 v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
|-|..-||+ .||.|||.+-.....-.+..-++++.+.++.+||+ ++.+|+| .+|||||||||.+||||.
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP--------~eLSGGQQQRVGv~RALA 151 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP--------HELSGGQQQRVGVARALA 151 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc--------hhcCcchhhHHHHHHHHh
Confidence 999987765 69999998732211111122356788999999996 4899999 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhh-HhhcceEEEccC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPAL-VAFHDVVLSLDG 649 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~-~~~~d~i~~l~~ 649 (1338)
.+|+++++|||++||||.++..+++.+++ .|+|+|+||||++. ++.+|+|.+|++
T Consensus 152 adP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~ 211 (309)
T COG1125 152 ADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDA 211 (309)
T ss_pred cCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecC
Confidence 99999999999999999999999887653 59999999999986 578999999986
No 117
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.9e-41 Score=359.95 Aligned_cols=198 Identities=28% Similarity=0.400 Sum_probs=172.5
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-ccc--cccEEEEe
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDL--NKEIFYVP 519 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-~~~--~~~i~~v~ 519 (1338)
..|+++|+++.|.++ ++|+|+||++++|++++|+||||||||||+|+|+|+.+|.+|+|.+.|.+ ... +.+|||||
T Consensus 3 ~~i~v~nl~v~y~~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgYVP 81 (254)
T COG1121 3 PMIEVENLTVSYGNR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGYVP 81 (254)
T ss_pred cEEEEeeeEEEECCE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEEcC
Confidence 368999999999655 79999999999999999999999999999999999999999999998864 111 35799999
Q ss_pred cCC---CCCCCCHHHHhcCCCCCCcc----cCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000711 520 QRP---YTAVGTLRDQLIYPLTSDQE----VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1338)
Q Consensus 520 Q~~---~l~~~tl~eni~~~~~~~~~----~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1338)
|.. |-|+.||+|-+..+...... ....+.+++.++|+.+|+.++.++.. .+|||||+||+-||||
T Consensus 82 Q~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i--------~~LSGGQ~QRV~lARA 153 (254)
T COG1121 82 QKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQI--------GELSGGQKQRVLLARA 153 (254)
T ss_pred cccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCcc--------cccCcHHHHHHHHHHH
Confidence 965 56888999999887433211 12234578999999999999999864 6899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 593 l~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|+++|++++|||||+|+|+.++..+++.+++ .|+||++||||++.+. ++|+|+.|.+
T Consensus 154 L~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~ 214 (254)
T COG1121 154 LAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNR 214 (254)
T ss_pred hccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcC
Confidence 9999999999999999999999999998754 4999999999999874 7999999986
No 118
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-41 Score=345.27 Aligned_cols=197 Identities=24% Similarity=0.305 Sum_probs=166.0
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCc---cccCCcccEE
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHID---EEAGSGCGIF 1175 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~---~~~~lr~~i~ 1175 (1338)
-|+++||+.+|. ...||+|+|++|++||.|.|+||||||||||+++|.+|-+|++|+|.+||.++. ++..+|+++|
T Consensus 2 mi~i~~l~K~fg-~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vG 80 (240)
T COG1126 2 MIEIKNLSKSFG-DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVG 80 (240)
T ss_pred eEEEEeeeEEeC-CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcC
Confidence 489999999994 567999999999999999999999999999999999999999999999998775 3466788999
Q ss_pred EEcCCCCCCC-CCHHHHhcCCC------chHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcc
Q 000711 1176 YVPQRPYTCL-GTLRDQIIYPL------SREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1338)
Q Consensus 1176 ~VpQdP~LF~-GTIReNL~~p~------~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 1248 (1338)
+|+|...||+ -|+-||+.++- +..++ .+...+.|+.|||.+..+.
T Consensus 81 mVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA---------------------~~~A~~lL~~VGL~~ka~~------- 132 (240)
T COG1126 81 MVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEA---------------------REKALELLEKVGLADKADA------- 132 (240)
T ss_pred eecccccccccchHHHHHHhhhHHHcCCCHHHH---------------------HHHHHHHHHHcCchhhhhh-------
Confidence 9999999996 59999997631 12222 2233467888888665544
Q ss_pred cCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHH---hcCCeEEEeccCCCCc-ccccceEEE
Q 000711 1249 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK---DMGITFVTSSQRPALI-PFHSLELRL 1324 (1338)
Q Consensus 1249 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~---~~~~TvI~IAHRl~~i-~~~d~~l~l 1324 (1338)
+..+||||||||+||||||.-+|+++++||||||||+|.-..+.++++ +.|.|+|+|+|-.... +.+|+++.+
T Consensus 133 ---yP~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFm 209 (240)
T COG1126 133 ---YPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFM 209 (240)
T ss_pred ---CccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEe
Confidence 346799999999999999999999999999999999998776655543 4699999999999754 568999999
Q ss_pred ecC
Q 000711 1325 IDG 1327 (1338)
Q Consensus 1325 ~~g 1327 (1338)
++|
T Consensus 210 d~G 212 (240)
T COG1126 210 DQG 212 (240)
T ss_pred eCC
Confidence 776
No 119
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=8.2e-41 Score=362.84 Aligned_cols=198 Identities=28% Similarity=0.379 Sum_probs=173.8
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 517 (1338)
.++++|+++.|+ ++++++|+||++++||+++|+||||||||||||+|+|+.+|.+|+|.++|.+ +++.++++|
T Consensus 2 ~L~~~~ls~~y~-~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~ 80 (258)
T COG1120 2 MLEVENLSFGYG-GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAY 80 (258)
T ss_pred eeEEEEEEEEEC-CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEE
Confidence 478999999996 7899999999999999999999999999999999999999999999999976 345678999
Q ss_pred EecCCCCC-CCCHHHHhcCCCCCCcc----cCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000711 518 VPQRPYTA-VGTLRDQLIYPLTSDQE----VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1338)
Q Consensus 518 v~Q~~~l~-~~tl~eni~~~~~~~~~----~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1338)
|||.+..+ .-||+|-+.+|...... ....+.+.+.++++.+++.++.++.- .+||||||||+.||||
T Consensus 81 vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~--------~~LSGGerQrv~iArA 152 (258)
T COG1120 81 VPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV--------DELSGGERQRVLIARA 152 (258)
T ss_pred eccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc--------cccChhHHHHHHHHHH
Confidence 99998665 45999999988643211 11223446888999999999999864 6899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 593 l~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
|+++|++++||||||+||...+.++++.+++ .|+|+|+|.||+++. ++||+++.|+++
T Consensus 153 LaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G 215 (258)
T COG1120 153 LAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDG 215 (258)
T ss_pred HhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999998764 489999999999875 699999999874
No 120
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-41 Score=364.12 Aligned_cols=203 Identities=23% Similarity=0.286 Sum_probs=170.7
Q ss_pred eEEeeeEEeCCC----ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc-----cCC
Q 000711 1100 ISFSKLDIITPS----QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-----AGS 1170 (1338)
Q Consensus 1100 I~f~nV~f~yp~----~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~-----~~l 1170 (1338)
|+|++|+..|+. ..++|+|+||+|++||..||+|+||||||||++++-+|-.|++|+|.+||.|+..+ ..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 899999998876 25699999999999999999999999999999999999999999999999999887 345
Q ss_pred cccEEEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCccc
Q 000711 1171 GCGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 1249 (1338)
Q Consensus 1171 r~~i~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 1249 (1338)
|++|++|+|++-|++ -|+.+|+.||... ++. ..+.....+.++|+-|||.+..++
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLei----------ag~------~k~ei~~RV~elLelVgL~dk~~~-------- 137 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLEL----------AGV------PKAEIKQRVAELLELVGLSDKADR-------- 137 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhh----------cCC------CHHHHHHHHHHHHHHcCChhhhcc--------
Confidence 778999999999997 7999999998631 110 000113446677788888654433
Q ss_pred CcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHH----hcCCeEEEeccCCCCc-ccccceEEE
Q 000711 1250 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPALI-PFHSLELRL 1324 (1338)
Q Consensus 1250 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~----~~~~TvI~IAHRl~~i-~~~d~~l~l 1324 (1338)
...+||||||||++|||||..+|+||+.||||||||++|-+.|.++++ +.|.|+++|+|-++.+ ++||++.+|
T Consensus 138 --yP~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm 215 (339)
T COG1135 138 --YPAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVL 215 (339)
T ss_pred --CchhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEe
Confidence 346899999999999999999999999999999999999887766553 4699999999999865 679999999
Q ss_pred ecCC
Q 000711 1325 IDGE 1328 (1338)
Q Consensus 1325 ~~g~ 1328 (1338)
+.|+
T Consensus 216 ~~G~ 219 (339)
T COG1135 216 DQGR 219 (339)
T ss_pred eCCE
Confidence 7663
No 121
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-40 Score=344.93 Aligned_cols=199 Identities=23% Similarity=0.352 Sum_probs=173.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC---------cccccc
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---------SDLNKE 514 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~---------~~~~~~ 514 (1338)
.|+++||+..||+++.+|+|+||+|++||+++|+||||||||||||+|.|+++|++|+|.++|.+ .+++++
T Consensus 3 ~i~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~~ 82 (258)
T COG3638 3 MIEVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRRD 82 (258)
T ss_pred eEEEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHHh
Confidence 58999999999999999999999999999999999999999999999999999999999999965 235788
Q ss_pred EEEEecCCCCCC-CCHHHHhcCCCCCCcc--------cCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHH
Q 000711 515 IFYVPQRPYTAV-GTLRDQLIYPLTSDQE--------VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQ 585 (1338)
Q Consensus 515 i~~v~Q~~~l~~-~tl~eni~~~~~~~~~--------~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQ 585 (1338)
|||++|.+.|.+ .|+.+|++.|...... ....+.....++|+.+|+.+..-... ++|||||||
T Consensus 83 iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--------~~LSGGQQQ 154 (258)
T COG3638 83 IGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--------STLSGGQQQ 154 (258)
T ss_pred ceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh--------ccCCcchhH
Confidence 999999998765 5999999877543211 11233456778899999988765533 689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 586 RlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
||+|||||+++|++++.|||+++|||.+.+.+++.+++ .|+|+|+.-|+.++.+ +||||+-|+++
T Consensus 155 RVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G 224 (258)
T COG3638 155 RVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAG 224 (258)
T ss_pred HHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCC
Confidence 99999999999999999999999999999999998864 4999999999999875 89999999863
No 122
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-41 Score=340.83 Aligned_cols=205 Identities=22% Similarity=0.265 Sum_probs=168.2
Q ss_pred CceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCC-----ceEEcCCCCCccc----c
Q 000711 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVS-----GSLTKPSQHIDEE----A 1168 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~s-----G~I~idg~dI~~~----~ 1168 (1338)
..++++|+++||. ...+|+|||++|++++.+|++|||||||||+++.|-|+.|..+ |+|.++|.||.+. .
T Consensus 6 ~~~~~~~l~~yYg-~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~ 84 (253)
T COG1117 6 PAIEVRDLNLYYG-DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVV 84 (253)
T ss_pred ceeEecceeEEEC-chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHH
Confidence 4689999999995 6779999999999999999999999999999999999999876 9999999999764 4
Q ss_pred CCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcc
Q 000711 1169 GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1338)
Q Consensus 1169 ~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 1248 (1338)
.+|+++|+|.|.|.-|+.||+||+.|+.. .+|..+ +..|+.+...|+++.||+.+.. -|+.
T Consensus 85 ~lRr~vGMVFQkPnPFp~SIydNVayG~r----------~~g~~~------~~ldeiVe~sLk~AaLWdEVKD---rL~~ 145 (253)
T COG1117 85 ELRRRVGMVFQKPNPFPMSIYDNVAYGLR----------LHGIKD------KELDEIVESSLKKAALWDEVKD---RLHK 145 (253)
T ss_pred HHHHHheeeccCCCCCCchHHHHHHHhHH----------hhccch------HHHHHHHHHHHHHhHhHHHhHH---HhhC
Confidence 67889999999999999999999998632 222111 2346667777888888876643 1222
Q ss_pred cCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCC-CcccccceEEEe
Q 000711 1249 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPA-LIPFHSLELRLI 1325 (1338)
Q Consensus 1249 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~-~i~~~d~~l~l~ 1325 (1338)
.+..|||||||||||||||.-+|+||+|||||||||+-+-..|.+++.+ .+-|||+|+|.+. ..+..|+.-.+.
T Consensus 146 ---sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~ 222 (253)
T COG1117 146 ---SALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFY 222 (253)
T ss_pred ---CccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhc
Confidence 2346999999999999999999999999999999999987777776654 5889999999884 555555555553
No 123
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4e-40 Score=371.06 Aligned_cols=197 Identities=26% Similarity=0.382 Sum_probs=174.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC----ccccccEEEEe
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYVP 519 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~----~~~~~~i~~v~ 519 (1338)
.|+++||++.|.+.. +++|+||+|++||+++|+||||||||||||+|+|+.+|++|+|.++|.+ ....++|++||
T Consensus 3 ~i~l~~v~K~yg~~~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamVF 81 (338)
T COG3839 3 ELELKNVRKSFGSFE-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMVF 81 (338)
T ss_pred EEEEeeeEEEcCCce-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEEe
Confidence 589999999996544 9999999999999999999999999999999999999999999999975 12357899999
Q ss_pred cCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000711 520 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1338)
Q Consensus 520 Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1338)
|++-|++ .||+|||.||.......+...++++.++++.+++++++++.| .+||||||||+|||||++++|+
T Consensus 82 Q~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P--------~~LSGGQrQRVAlaRAlVr~P~ 153 (338)
T COG3839 82 QNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP--------LQLSGGQRQRVALARALVRKPK 153 (338)
T ss_pred CCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc--------ccCChhhHHHHHHHHHHhcCCC
Confidence 9998765 699999999987654333445788999999999999999999 7999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 599 FAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 599 illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
+++||||+|+||.+.+..+...+++ .|.|+|+||||...+ ..+|+|++|.+
T Consensus 154 v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~ 209 (338)
T COG3839 154 VFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMND 209 (338)
T ss_pred EEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeC
Confidence 9999999999999988877666543 589999999997654 68999999984
No 124
>PF06472 ABC_membrane_2: ABC transporter transmembrane region 2; InterPro: IPR010509 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This region covers the N terminus and first two membrane regions of a small family of ABC transporters. Mutations in this domain in P28288 from SWISSPROT are believed responsible for Zellweger Syndrome-2 []; mutations in P33897 from SWISSPROT are responsible for recessive X-linked adrenoleukodystrophy []. A Saccharomyces cerevisiae protein containing this domain is involved in the import of long-chain fatty acids [].; GO: 0006810 transport, 0016020 membrane
Probab=100.00 E-value=5.1e-38 Score=357.40 Aligned_cols=276 Identities=28% Similarity=0.476 Sum_probs=260.9
Q ss_pred ChHHHHHHHHHHhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHH
Q 000711 84 GLKSLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHST 163 (1338)
Q Consensus 84 ~~~~l~~l~~~~~p~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1338)
-++++++|++...|+.++++..++++++++.++++.++++++.|+++||++++++|.+.|++.++.+++++++.+++++.
T Consensus 6 flr~f~~L~~~~~~~~~~~~~~ll~~ll~l~l~~~~lsv~~~~~~g~~~~aL~~~d~~~f~~~l~~~~~l~~~~~~l~~~ 85 (281)
T PF06472_consen 6 FLRRFWRLARIYWPSERWKAWLLLLVLLLLLLARVYLSVRINFWNGDFYNALQQKDLQAFWRLLLLFLLLAIASALLNSI 85 (281)
T ss_pred HHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35778889988889888888888888899999999999999999999999999999999999999999999888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCCCCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000711 164 SKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLC 243 (1338)
Q Consensus 164 ~~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~~~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 243 (1338)
.+|+++.++++||+|||++++++|+++..||+++..++++|||||||++||+.|++.+++++.+++.++++.+.|++.|+
T Consensus 86 ~~yl~~~L~l~wR~~Lt~~~~~~yl~~~~yY~l~~~~~~idNpDQRIteDi~~f~~~~~~l~~~~~~~~~~l~~f~~~L~ 165 (281)
T PF06472_consen 86 LKYLRQRLALRWREWLTRHLHDRYLSNRTYYRLNNLDGRIDNPDQRITEDIRKFTESSLSLFLGLLKPILDLISFSVILW 165 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCchhHhhhccccccccHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999999999998
Q ss_pred HhchhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 000711 244 SYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRH 323 (1338)
Q Consensus 244 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~ 323 (1338)
...++...+++++|++++++++++++|++.+++.++|+.||+||+.|.++++|+|+||+|+||+.|+++++++|+++.++
T Consensus 166 ~~~g~~~~~~~~~y~~~~t~~~~~ig~~l~~l~~~~q~~Ea~fR~~l~r~r~naE~IA~~~Ge~~E~~~l~~~f~~l~~~ 245 (281)
T PF06472_consen 166 SISGWLGPWAALIYAILGTLITHWIGPPLGRLNAEQQRLEADFRYALVRLRENAESIAFYRGESRERRRLDRRFDALIDN 245 (281)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhchHHHHHHHHHHhHHHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 87677666677889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 000711 324 MRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFF 359 (1338)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (1338)
+++.++.+.+.++++.++.++++..++++++.||+|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~F 281 (281)
T PF06472_consen 246 WRRLIRRRLRLGFFTNFYVKYLSSILPYLVVAPPYF 281 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Confidence 999999999999999998789999999999988875
No 125
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-40 Score=343.30 Aligned_cols=197 Identities=34% Similarity=0.467 Sum_probs=171.5
Q ss_pred cEEEEeEEEEcCCCC---eeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-------ccccc
Q 000711 444 YIEFSGVKVVTPTGN---VLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-------SDLNK 513 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~---~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-------~~~~~ 513 (1338)
.++++|+++.|+.++ ++++|+||+|.+||+++|+|+||||||||.|+|+|+.+|++|+|.++|.. ....+
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 589999999998665 69999999999999999999999999999999999999999999999954 12467
Q ss_pred cEEEEecCCCC---CCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCc-hHHhcCCCCccccCCCCCChhHHHHHHH
Q 000711 514 EIFYVPQRPYT---AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1338)
Q Consensus 514 ~i~~v~Q~~~l---~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1338)
.+-+|||+|+- |..|+++-|.-|...... .....++.++++.+||. .+.+++| .+|||||+||+||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~--~~~~~~i~~~L~~VgL~~~~l~R~P--------~eLSGGQ~QRiaI 152 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGL--SKSQQRIAELLDQVGLPPSFLDRRP--------HELSGGQRQRIAI 152 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCc--cHHHHHHHHHHHHcCCCHHHHhcCc--------hhcChhHHHHHHH
Confidence 89999999974 456999988776543211 12345689999999996 5788888 6899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 590 ARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
||||..+|++||||||||+||......+++.+.+ .+.|+|+|||+++.+. .||||.+|+++
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G 218 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNG 218 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCC
Confidence 9999999999999999999999999999998753 5889999999999986 69999999974
No 126
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-40 Score=372.00 Aligned_cols=199 Identities=25% Similarity=0.382 Sum_probs=175.1
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC----ccccccEEEE
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYV 518 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~----~~~~~~i~~v 518 (1338)
..++++||++.|. +..+++|+||+|++||+++++||||||||||||+|+|+..|++|+|.++|.+ ..-++.|++|
T Consensus 4 ~~l~i~~v~k~yg-~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig~V 82 (352)
T COG3842 4 PALEIRNVSKSFG-DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIGMV 82 (352)
T ss_pred ceEEEEeeeeecC-CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhccccee
Confidence 4689999999996 7899999999999999999999999999999999999999999999999976 2235789999
Q ss_pred ecCCCCCC-CCHHHHhcCCCCCCcccC-CCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccC
Q 000711 519 PQRPYTAV-GTLRDQLIYPLTSDQEVE-PLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 596 (1338)
Q Consensus 519 ~Q~~~l~~-~tl~eni~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~ 596 (1338)
+|+.-||+ .||+|||.||........ ...++++.++++.++|+++.++.| .+||||||||+||||||..+
T Consensus 83 FQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p--------~qLSGGQqQRVALARAL~~~ 154 (352)
T COG3842 83 FQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP--------HQLSGGQQQRVALARALVPE 154 (352)
T ss_pred ecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh--------hhhChHHHHHHHHHHHhhcC
Confidence 99998875 699999999987322111 123458899999999999999998 69999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHH----ccCCeEEEEecChhh-HhhcceEEEccCC
Q 000711 597 PKFAILDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPAL-VAFHDVVLSLDGE 650 (1338)
Q Consensus 597 p~illLDEpts~LD~~~~~~i~~~l~----~~~~t~i~itH~~~~-~~~~d~i~~l~~~ 650 (1338)
|++|+||||.||||.+.+.++...++ +.|+|.|+||||.+. +..+|+|.+|+++
T Consensus 155 P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G 213 (352)
T COG3842 155 PKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDG 213 (352)
T ss_pred cchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCC
Confidence 99999999999999999888777664 459999999999765 5789999999874
No 127
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-40 Score=336.94 Aligned_cols=201 Identities=22% Similarity=0.246 Sum_probs=170.0
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCc-----cEEEeCCCC--------c
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVS-----GHIAKPGVG--------S 509 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~-----G~i~~~~~~--------~ 509 (1338)
..++++|++++|. ++.+|+|+|++|++++++|++||||||||||||++.++.+..+ |+|.++|.+ .
T Consensus 6 ~~~~~~~l~~yYg-~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~ 84 (253)
T COG1117 6 PAIEVRDLNLYYG-DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVV 84 (253)
T ss_pred ceeEecceeEEEC-chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHH
Confidence 4689999999995 6789999999999999999999999999999999999988765 999999976 2
Q ss_pred cccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHh-cCCCCccccCCCCCChhHHHHHH
Q 000711 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLD-RYPPEKEINWGDELSLGEQQRLG 588 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~~~~~~g~~LSgGqkQRla 588 (1338)
++|++||+|+|+|.-|+.||+||+.||.......+..-++.+++.|+.+.|++-++ ++. ..+..||||||||++
T Consensus 85 ~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~-----~sa~~LSGGQQQRLc 159 (253)
T COG1117 85 ELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLH-----KSALGLSGGQQQRLC 159 (253)
T ss_pred HHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhh-----CCccCCChhHHHHHH
Confidence 47899999999999999999999999865433322334566788899999876543 321 124679999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 589 lARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
||||+.-+|++|+||||||||||.+..+|-+.+.+ .+-|+|+|||.+.-. +-+|+...+-.
T Consensus 160 IARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~ 223 (253)
T COG1117 160 IARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYL 223 (253)
T ss_pred HHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcc
Confidence 99999999999999999999999998888887765 478999999999865 46788888764
No 128
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=5.8e-40 Score=328.10 Aligned_cols=202 Identities=24% Similarity=0.309 Sum_probs=172.1
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc-----cCCcccE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-----AGSGCGI 1174 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~-----~~lr~~i 1174 (1338)
|+|+||+..||+++++|+|+||+|++||.+-|+|||||||||++++|++.-.|++|+|.++|.|+..+ ..+|++|
T Consensus 2 I~f~~V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~I 81 (223)
T COG2884 2 IRFENVSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQI 81 (223)
T ss_pred eeehhhhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhee
Confidence 79999999999998899999999999999999999999999999999999999999999999999887 3678899
Q ss_pred EEEcCCCCCC-CCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCccc
Q 000711 1175 FYVPQRPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1338)
Q Consensus 1175 ~~VpQdP~LF-~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 1253 (1338)
++|.||--|. +-|+.||+++|..-. | ..++.....+.++|+.|||.+....+|
T Consensus 82 GvVFQD~rLL~~~tvyeNVA~pL~v~----------G------~~~~~i~~rV~~~L~~VgL~~k~~~lP---------- 135 (223)
T COG2884 82 GVVFQDFRLLPDRTVYENVALPLRVI----------G------KPPREIRRRVSEVLDLVGLKHKARALP---------- 135 (223)
T ss_pred eeEeeeccccccchHhhhhhhhhhcc----------C------CCHHHHHHHHHHHHHHhccchhhhcCc----------
Confidence 9999998866 569999999885310 0 011123455778889999987766664
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCccc-ccceEEEecC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIPF-HSLELRLIDG 1327 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i~~-~d~~l~l~~g 1327 (1338)
.+||||||||+|||||++.+|++||-||||-+||+++-..|.++.++ .|.||++.+|..+++.- --+++.|++|
T Consensus 136 ~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~G 213 (223)
T COG2884 136 SQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDG 213 (223)
T ss_pred cccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCC
Confidence 57999999999999999999999999999999999998887776644 69999999999987754 3466677554
No 129
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=378.15 Aligned_cols=211 Identities=20% Similarity=0.224 Sum_probs=171.4
Q ss_pred CCCCCCCCCCceEEeeeEEeCCC-ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCceEEcCCC
Q 000711 1089 HKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP-----VVSGSLTKPSQ 1162 (1338)
Q Consensus 1089 ~~wp~~~~~g~I~f~nV~f~yp~-~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~-----~~sG~I~idg~ 1162 (1338)
..||. .+.|+|+||++.|++ .+++|+|+||+|++||++|||||||||||||+++|+|+++ |.+|+|.+||+
T Consensus 73 ~~~~~---~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~ 149 (329)
T PRK14257 73 EDFNH---ANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGT 149 (329)
T ss_pred CCCCc---CceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCE
Confidence 35876 578999999999874 5679999999999999999999999999999999999997 46999999999
Q ss_pred CCccc----cCCcccEEEEcCCCCCCCCCHHHHhcCCCc----hHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCC
Q 000711 1163 HIDEE----AGSGCGIFYVPQRPYTCLGTLRDQIIYPLS----REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVR 1234 (1338)
Q Consensus 1163 dI~~~----~~lr~~i~~VpQdP~LF~GTIReNL~~p~~----~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~ 1234 (1338)
||... ..+|.+++||||+|.+|++|+++||.++.. .+++.+ +....++++.++
T Consensus 150 ~i~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~-------------------~~~~~~~l~~~~ 210 (329)
T PRK14257 150 NTRSKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKIL-------------------EKIVEKSLKSAA 210 (329)
T ss_pred EccccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHH-------------------HHHHHHHHHHcC
Confidence 99732 245668999999999999999999986311 011110 112344555565
Q ss_pred chhhhhhhcccCcccC-cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccC
Q 000711 1235 LSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQR 1311 (1338)
Q Consensus 1235 L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHR 1311 (1338)
|+. ++++.+ +.+.+||||||||+|||||++++|+|||||||||+||+++.+.+++.++. .++|+|+|||+
T Consensus 211 L~~-------~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~ 283 (329)
T PRK14257 211 LWD-------EVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHS 283 (329)
T ss_pred Ccc-------hhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 532 233333 35788999999999999999999999999999999999999988887754 47999999999
Q ss_pred CCCcc-cccceEEEecCC
Q 000711 1312 PALIP-FHSLELRLIDGE 1328 (1338)
Q Consensus 1312 l~~i~-~~d~~l~l~~g~ 1328 (1338)
++++. ++|++++|.+|.
T Consensus 284 l~~i~~~~Driivl~~G~ 301 (329)
T PRK14257 284 MAQAQRISDETVFFYQGW 301 (329)
T ss_pred HHHHHHhCCEEEEEECCE
Confidence 99765 599999997663
No 130
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.3e-38 Score=356.81 Aligned_cols=191 Identities=21% Similarity=0.210 Sum_probs=147.6
Q ss_pred CceEEeeeEEeCCC-ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEE
Q 000711 1098 DSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFY 1176 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~-~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~ 1176 (1338)
..++|.+|+|.|+. .++.++++++.++.-+++.+||++|+||||+++++.+=..|..|.+.+.+ |.+|++
T Consensus 361 p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~---------r~ri~~ 431 (582)
T KOG0062|consen 361 PNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP---------RLRIKY 431 (582)
T ss_pred CeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc---------cceecc
Confidence 46999999997754 45899999999999999999999999999999999998888899887544 467998
Q ss_pred EcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCC
Q 000711 1177 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 1256 (1338)
Q Consensus 1177 VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~L 1256 (1338)
-.|.-+=| +.-|.. ++.... ...|...++++...+..+||...+... .-..|
T Consensus 432 f~Qhhvd~---l~~~v~-------~vd~~~---------~~~pG~~~ee~r~hl~~~Gl~g~la~~---------si~~L 483 (582)
T KOG0062|consen 432 FAQHHVDF---LDKNVN-------AVDFME---------KSFPGKTEEEIRRHLGSFGLSGELALQ---------SIASL 483 (582)
T ss_pred hhHhhhhH---HHHHhH-------HHHHHH---------HhCCCCCHHHHHHHHHhcCCCchhhhc---------ccccc
Confidence 88865433 111210 000000 012333566666666666653222111 12469
Q ss_pred ChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHhcCCeEEEeccCCCCcccccceEEEe
Q 000711 1257 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLI 1325 (1338)
Q Consensus 1257 SgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~~~~TvI~IAHRl~~i~~~d~~l~l~ 1325 (1338)
|||||-|+++|-....+|.+|||||||..||.|+-.++-+.++..+--||+|+|..+.++-...++...
T Consensus 484 SGGQKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F~GGVv~VSHd~~fi~~~c~E~Wvv 552 (582)
T KOG0062|consen 484 SGGQKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNFNGGVVLVSHDEEFISSLCKELWVV 552 (582)
T ss_pred CCcchhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhcCCcEEEEECcHHHHhhcCceeEEE
Confidence 999999999999999999999999999999999999999888888889999999999999888888874
No 131
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.1e-39 Score=335.25 Aligned_cols=195 Identities=28% Similarity=0.366 Sum_probs=170.4
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC---------ccccc
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---------SDLNK 513 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~---------~~~~~ 513 (1338)
..|++++|++.+ +++.+++|+||+|++||+++|+||||||||||+|+|.|+++|++|+|.++|.+ .++++
T Consensus 7 ~~I~vr~v~~~f-G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~ 85 (263)
T COG1127 7 PLIEVRGVTKSF-GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRK 85 (263)
T ss_pred ceEEEeeeeeec-CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHh
Confidence 469999999998 56899999999999999999999999999999999999999999999999976 13578
Q ss_pred cEEEEecCCCCCCC-CHHHHhcCCCCCCcccCCCCHHHH----HHHHHHcCCchH-HhcCCCCccccCCCCCChhHHHHH
Q 000711 514 EIFYVPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGM----VELLKNVDLEYL-LDRYPPEKEINWGDELSLGEQQRL 587 (1338)
Q Consensus 514 ~i~~v~Q~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~----~~~l~~~~l~~~-~~~~~~~~~~~~g~~LSgGqkQRl 587 (1338)
++|+++|.--||.. ||+||+.||..... ..+++.+ ..-|+.+||... .+.+| .+||||+++|+
T Consensus 86 r~GvlFQ~gALFssltV~eNVafplre~~---~lp~~~i~~lv~~KL~~VGL~~~~~~~~P--------sELSGGM~KRv 154 (263)
T COG1127 86 RMGVLFQQGALFSSLTVFENVAFPLREHT---KLPESLIRELVLMKLELVGLRGAAADLYP--------SELSGGMRKRV 154 (263)
T ss_pred heeEEeeccccccccchhHhhheehHhhc---cCCHHHHHHHHHHHHHhcCCChhhhhhCc--------hhhcchHHHHH
Confidence 89999999999975 99999999875432 2333343 345788999887 78888 78999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 588 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 588 alARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|||||+..+|+++++|||||+|||.+...+-+++++ .|.|+|+|||+++.+. .||+++++.+
T Consensus 155 aLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~ 221 (263)
T COG1127 155 ALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLAD 221 (263)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeC
Confidence 999999999999999999999999998777666543 5999999999998764 7899999986
No 132
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-39 Score=350.87 Aligned_cols=199 Identities=30% Similarity=0.439 Sum_probs=178.1
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-------ccccccEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-------SDLNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-------~~~~~~i~ 516 (1338)
.++++|++|.|+++.++++|+||+|++||.++|+||||||||||+++++|+++|++|+|.++|.+ ..+++++|
T Consensus 3 ~i~~~~l~~~y~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~vG 82 (235)
T COG1122 3 MIEAENLSFRYPGRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKVG 82 (235)
T ss_pred eEEEEEEEEEcCCCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcceE
Confidence 58899999999877899999999999999999999999999999999999999999999999964 24678999
Q ss_pred EEecCC--CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 517 YVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 517 ~v~Q~~--~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
||+|+| .+|..||.|.+.|+........+.-++++.++++.+++.++.++.| .+||||||||+|||.+|.
T Consensus 83 ~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p--------~~LSGGqkqRvaIA~vLa 154 (235)
T COG1122 83 LVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP--------FNLSGGQKQRVAIAGVLA 154 (235)
T ss_pred EEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc--------cccCCcceeeHHhhHHHH
Confidence 999999 6888999999999876543322224567889999999999988877 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc---c-CCeEEEEecChhhHh-hcceEEEccCC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~-~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
.+|+++|||||||+||+...+.+.+.+++ . |+|+|++||+++.+. +||++++|+++
T Consensus 155 ~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G 215 (235)
T COG1122 155 MGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDG 215 (235)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECC
Confidence 99999999999999999999999998765 2 689999999999876 59999999874
No 133
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=5.3e-39 Score=317.94 Aligned_cols=195 Identities=25% Similarity=0.343 Sum_probs=170.9
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC----ccccccEEEEec
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYVPQ 520 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~----~~~~~~i~~v~Q 520 (1338)
+.+++|.+.|.. .--.++++|++||+++|+||||||||||+++|+|+..|.+|+|.++|++ ....+-+++++|
T Consensus 2 l~L~~V~~~y~~---~~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSmlFQ 78 (231)
T COG3840 2 LALDDVRFSYGH---LPMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSMLFQ 78 (231)
T ss_pred ccccceEEeeCc---ceEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhhhh
Confidence 567889998843 2236889999999999999999999999999999999999999999987 234567999999
Q ss_pred CCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000711 521 RPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1338)
Q Consensus 521 ~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1338)
+..+|.- ||.+||.+|....-.....+.+++..++..+|+..+.+++| .+||||||||+||||+|+++-+|
T Consensus 79 EnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP--------~~LSGGqRQRvALARclvR~~Pi 150 (231)
T COG3840 79 ENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP--------GELSGGQRQRVALARCLVREQPI 150 (231)
T ss_pred ccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc--------cccCchHHHHHHHHHHHhccCCe
Confidence 9999975 99999999876544444556788999999999999999999 69999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHH----HccCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 600 AILDECTSAVTTDMEERFCAKV----RAMGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 600 llLDEpts~LD~~~~~~i~~~l----~~~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
++||||+|+|||..+.++...+ .+.+.|+++|||+++.+ +.+|++++++++
T Consensus 151 lLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~G 206 (231)
T COG3840 151 LLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNG 206 (231)
T ss_pred EEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCC
Confidence 9999999999999988877654 45799999999999876 479999999873
No 134
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.3e-39 Score=342.70 Aligned_cols=204 Identities=25% Similarity=0.310 Sum_probs=165.3
Q ss_pred eEEeeeEEeCCCc---cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc------CC
Q 000711 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA------GS 1170 (1338)
Q Consensus 1100 I~f~nV~f~yp~~---~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~------~l 1170 (1338)
++++||+..|... ..+|+|+||+|++||.|+|+||||||||||+++|.++-.|++|.|.++|.|+..++ .+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 5789999977543 47999999999999999999999999999999999999999999999999998762 44
Q ss_pred cccEEEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCccc
Q 000711 1171 GCGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 1249 (1338)
Q Consensus 1171 r~~i~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 1249 (1338)
|.+|+||+|+..|.+ -|++||+..|... .+.. .........++++.++|.+....
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~----------~~~~------~~~~~~~~~~l~~~lgl~~~~~~-------- 137 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLI----------AGKS------AGRRKRAAEELLEVLGLEDRLLK-------- 137 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHH----------cCCC------hhHHHHHHHHHHHhcCChhhhcc--------
Confidence 568999999999875 5999999755210 0000 00012234455666676533321
Q ss_pred CcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHH----hcCCeEEEeccCCCCcccccceEEEe
Q 000711 1250 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPALIPFHSLELRLI 1325 (1338)
Q Consensus 1250 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~----~~~~TvI~IAHRl~~i~~~d~~l~l~ 1325 (1338)
....+||||||||+||||||+.+|+|++.||||++||.++.+.+.++++ +.|+|+|+|+|......++|+++.+.
T Consensus 138 -~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~ 216 (226)
T COG1136 138 -KKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELK 216 (226)
T ss_pred -CCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEe
Confidence 1235799999999999999999999999999999999999988776653 35899999999999999999999999
Q ss_pred cCC
Q 000711 1326 DGE 1328 (1338)
Q Consensus 1326 ~g~ 1328 (1338)
||.
T Consensus 217 dG~ 219 (226)
T COG1136 217 DGK 219 (226)
T ss_pred CCe
Confidence 886
No 135
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.7e-38 Score=367.98 Aligned_cols=199 Identities=26% Similarity=0.337 Sum_probs=171.6
Q ss_pred cEEEEeEEEEcCC---CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc---------cc
Q 000711 444 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DL 511 (1338)
Q Consensus 444 ~i~~~~v~~~~~~---~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~ 511 (1338)
+|+++||++.|++ ..++|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. ..
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 3789999999963 24799999999999999999999999999999999999999999999999651 13
Q ss_pred cccEEEEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000711 512 NKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1338)
Q Consensus 512 ~~~i~~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1338)
+++|+|+||++.++. .|++||+.++...........++++.++++.+++.+..++.| .+||||||||++||
T Consensus 81 r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~--------~~LSgGqkQRV~IA 152 (343)
T TIGR02314 81 RRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP--------SNLSGGQKQRVAIA 152 (343)
T ss_pred hcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh--------hhCCHHHHHHHHHH
Confidence 568999999998875 699999998753211111122456788999999999888877 68999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 591 Ral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
|||+.+|++|+||||||+||+.+...+++.+++ .|+|+|+|||+++.+. .||++++|+++
T Consensus 153 RAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G 217 (343)
T TIGR02314 153 RALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNG 217 (343)
T ss_pred HHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999988765 3899999999999884 69999999863
No 136
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-38 Score=342.17 Aligned_cols=198 Identities=28% Similarity=0.419 Sum_probs=172.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCC---Cc-c---ccccEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGV---GS-D---LNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~---~~-~---~~~~i~ 516 (1338)
+|+++|+++.++ ..++++|+|++|+.||.+++.||||||||||||+|+|+..|++|+|.++|. |. . -.++||
T Consensus 2 ~i~i~~~~~~~~-~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~VG 80 (345)
T COG1118 2 SIRINNVKKRFG-AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKVG 80 (345)
T ss_pred ceeehhhhhhcc-cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhccee
Confidence 467888888775 467899999999999999999999999999999999999999999999997 51 1 236899
Q ss_pred EEecCCCCCC-CCHHHHhcCCCCCCcc--cCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000711 517 YVPQRPYTAV-GTLRDQLIYPLTSDQE--VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1338)
Q Consensus 517 ~v~Q~~~l~~-~tl~eni~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1338)
||+|+.-+|. .||.|||.||...... .+...+.++.+.|+.|+|+.+.+++| .+||||||||+||||||
T Consensus 81 fvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP--------~QLSGGQrQRVALARAL 152 (345)
T COG1118 81 FVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP--------AQLSGGQRQRVALARAL 152 (345)
T ss_pred EEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc--------hhcChHHHHHHHHHHHh
Confidence 9999987765 7999999999853311 12234678899999999999999999 69999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 594 ~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
..+|++|+||||+++||.+..+.+.+.|++ .|.|+++||||.+.. +.+|+|++|+++
T Consensus 153 A~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G 214 (345)
T COG1118 153 AVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQG 214 (345)
T ss_pred hcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCC
Confidence 999999999999999999999888877754 499999999998865 689999999874
No 137
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2e-38 Score=349.23 Aligned_cols=197 Identities=26% Similarity=0.370 Sum_probs=169.1
Q ss_pred EEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc---------ccccc
Q 000711 445 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKE 514 (1338)
Q Consensus 445 i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~~~ 514 (1338)
++++|+++.|+++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 7899999999754 5799999999999999999999999999999999999999999999998641 13467
Q ss_pred EEEEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000711 515 IFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1338)
Q Consensus 515 i~~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1338)
++|+||+|.++. .|++||+.++...........++++.++++.+++.+..++.+ .+||||||||++|||||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~laral 153 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP--------MQLSGGEQQRVAIARAI 153 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHHHHHH
Confidence 999999998876 599999987532111001113456788999999998888766 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 594 ~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
+++|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .||++++|++
T Consensus 154 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~ 213 (216)
T TIGR00960 154 VHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSR 213 (216)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999999988764 3899999999999876 6899999976
No 138
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=7.2e-38 Score=353.51 Aligned_cols=199 Identities=22% Similarity=0.336 Sum_probs=177.2
Q ss_pred cEEEEeEEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEE
Q 000711 444 YIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~-~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~ 516 (1338)
.|+++|+++.|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++ .+|+|.++|.+ ..+++.++
T Consensus 2 ~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i~ 80 (275)
T cd03289 2 QMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAFG 80 (275)
T ss_pred eEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhEE
Confidence 5899999999974 4679999999999999999999999999999999999998 79999999965 23567899
Q ss_pred EEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHH
Q 000711 517 YVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLF 593 (1338)
Q Consensus 517 ~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal 593 (1338)
|+||+|.+|++|+++|+.+.. ..+++++.++++.++++++++++|.+..+ +.|.+||||||||++||||+
T Consensus 81 ~v~q~~~lf~~tv~~nl~~~~-------~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRal 153 (275)
T cd03289 81 VIPQKVFIFSGTFRKNLDPYG-------KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSV 153 (275)
T ss_pred EECCCcccchhhHHHHhhhcc-------CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999996321 13467889999999999999998864332 46889999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 594 ~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
+++|++++|||||++||+.+.+.+++.+++ .++|+|+||||++.+..||+|++|+++
T Consensus 154 l~~p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G 212 (275)
T cd03289 154 LSKAKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEEN 212 (275)
T ss_pred hcCCCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCC
Confidence 999999999999999999999999998875 489999999999999999999999863
No 139
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=5.3e-38 Score=346.60 Aligned_cols=198 Identities=29% Similarity=0.434 Sum_probs=168.8
Q ss_pred EEEEeEEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-c---------c
Q 000711 445 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-D---------L 511 (1338)
Q Consensus 445 i~~~~v~~~~~~~---~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-~---------~ 511 (1338)
++++||++.|+++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 4689999999653 6899999999999999999999999999999999999999999999998641 1 2
Q ss_pred cccEEEEecCCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000711 512 NKEIFYVPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1338)
Q Consensus 512 ~~~i~~v~Q~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1338)
++.++|+||+|.++.. |++||+.++...........++++.++++.+++++..++.+ .+||||||||++||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la 152 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYP--------SELSGGQQQRVAIA 152 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcCh--------hhcCHHHHHHHHHH
Confidence 3579999999988875 99999987542211101112356788999999988877765 68999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 591 Ral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
|||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+..||++++|+++
T Consensus 153 ~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G 216 (218)
T cd03255 153 RALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDG 216 (218)
T ss_pred HHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCC
Confidence 999999999999999999999999999888764 378999999999988899999999863
No 140
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-38 Score=366.39 Aligned_cols=198 Identities=25% Similarity=0.388 Sum_probs=171.8
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----cccccEEEEe
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVP 519 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~ 519 (1338)
.++++|+++.|++++++|+|+||++++||+++|+||||||||||+|+|+|+.+|++|+|.++|.+. ..++.|+|||
T Consensus 3 ~l~i~~l~~~~~~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~ 82 (356)
T PRK11650 3 GLKLQAVRKSYDGKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMVF 82 (356)
T ss_pred EEEEEeEEEEeCCCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 489999999996567899999999999999999999999999999999999999999999999641 1246799999
Q ss_pred cCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000711 520 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1338)
Q Consensus 520 Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1338)
|++.+|. .|++|||.|+............+++.++++.++++++.++.| .+||||||||++|||||+.+|+
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LSgGq~QRvalARAL~~~P~ 154 (356)
T PRK11650 83 QNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP--------RELSGGQRQRVAMGRAIVREPA 154 (356)
T ss_pred CCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999885 699999999754211111112356789999999999999987 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 599 FAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 599 illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
++|||||||+||+.+++.+.+.+++ .|+|+|+|||+++.+ ..+|++++|++
T Consensus 155 llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~ 210 (356)
T PRK11650 155 VFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNG 210 (356)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 9999999999999999998887753 389999999999865 58999999986
No 141
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.8e-38 Score=337.12 Aligned_cols=203 Identities=22% Similarity=0.311 Sum_probs=167.1
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEc
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~Vp 1178 (1338)
.|+++|++++|.+. +||+||||+|++|+.++|+||||||||||+++++|+..|.+|+|.+.|.+++.... +.+|+|||
T Consensus 4 ~i~v~nl~v~y~~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~-~~~IgYVP 81 (254)
T COG1121 4 MIEVENLTVSYGNR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK-RLRIGYVP 81 (254)
T ss_pred EEEEeeeEEEECCE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc-CCeEEEcC
Confidence 69999999999766 69999999999999999999999999999999999999999999999998876643 34699999
Q ss_pred CCC---CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCC
Q 000711 1179 QRP---YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1338)
Q Consensus 1179 QdP---~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 1255 (1338)
|.. .-|+-|++|-+..+.... ........+...+.+.++|+.|++.++.++. -..
T Consensus 82 Q~~~~d~~fP~tV~d~V~~g~~~~------------~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~----------i~~ 139 (254)
T COG1121 82 QKSSVDRSFPITVKDVVLLGRYGK------------KGWFRRLNKKDKEKVDEALERVGMEDLRDRQ----------IGE 139 (254)
T ss_pred cccccCCCCCcCHHHHHHccCccc------------ccccccccHHHHHHHHHHHHHcCchhhhCCc----------ccc
Confidence 965 347789998876532100 0001111111235678889999997766552 246
Q ss_pred CChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCC-CcccccceEEEe
Q 000711 1256 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPA-LIPFHSLELRLI 1325 (1338)
Q Consensus 1256 LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~-~i~~~d~~l~l~ 1325 (1338)
|||||+||+.|||||+.+|++|+|||||+++|+.++..+++++++ .|+||++|+|.++ ..++.|+++.|.
T Consensus 140 LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln 213 (254)
T COG1121 140 LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN 213 (254)
T ss_pred cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc
Confidence 999999999999999999999999999999999999998887643 4999999999996 778899999993
No 142
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1e-37 Score=340.56 Aligned_cols=191 Identities=30% Similarity=0.403 Sum_probs=166.9
Q ss_pred EEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC---ccccccEEEEecCC-
Q 000711 447 FSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---SDLNKEIFYVPQRP- 522 (1338)
Q Consensus 447 ~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~---~~~~~~i~~v~Q~~- 522 (1338)
++|+++.|++++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|+||+|
T Consensus 2 ~~~l~~~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~ 81 (205)
T cd03226 2 IENISFSYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQDVD 81 (205)
T ss_pred cccEEEEeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecChh
Confidence 67899998643689999999999999999999999999999999999999999999999865 22346799999998
Q ss_pred -CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000711 523 -YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAI 601 (1338)
Q Consensus 523 -~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ill 601 (1338)
+++..|++||+.++.... ....+++.++++.+++.++.++.| ..||||||||++|||||+.+|+++|
T Consensus 82 ~~~~~~tv~e~l~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~~p~lll 149 (205)
T cd03226 82 YQLFTDSVREELLLGLKEL----DAGNEQAETVLKDLDLYALKERHP--------LSLSGGQKQRLAIAAALLSGKDLLI 149 (205)
T ss_pred hhhhhccHHHHHhhhhhhc----CccHHHHHHHHHHcCCchhcCCCc--------hhCCHHHHHHHHHHHHHHhCCCEEE
Confidence 466789999998864321 122457889999999998887766 6899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 602 LDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 602 LDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 150 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 201 (205)
T cd03226 150 FDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLAN 201 (205)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999988864 4899999999999875 6999999986
No 143
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-37 Score=343.86 Aligned_cols=200 Identities=27% Similarity=0.353 Sum_probs=169.8
Q ss_pred EEEEeEEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-ccccccEEEEec
Q 000711 445 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQ 520 (1338)
Q Consensus 445 i~~~~v~~~~~~~---~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-~~~~~~i~~v~Q 520 (1338)
++++|+++.|+++ +++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+||
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 4689999999642 689999999999999999999999999999999999999999999999865 234568999999
Q ss_pred CCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000711 521 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1338)
Q Consensus 521 ~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1338)
+|.++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||||+++|++
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrl~la~al~~~p~l 152 (220)
T cd03293 81 QDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYP--------HQLSGGMRQRVALARALAVDPDV 152 (220)
T ss_pred ccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc--------ccCCHHHHHHHHHHHHHHcCCCE
Confidence 998876 699999987532111001112456788999999988887766 68999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccC-CCc
Q 000711 600 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG-EGE 652 (1338)
Q Consensus 600 llLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~-~g~ 652 (1338)
+||||||++||+.+.+.+++.+++ .|+|+|++||+++.+ ..||++++|++ +|.
T Consensus 153 llLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 153 LLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 999999999999999999998764 379999999999866 57999999985 454
No 144
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=1.9e-37 Score=325.66 Aligned_cols=166 Identities=54% Similarity=0.999 Sum_probs=154.0
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCccccccEEEEecCCCC
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYT 524 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~l 524 (1338)
++++|+++.|++++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.+++. ++++|++|++++
T Consensus 1 i~~~~~~~~~~~~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----~~i~~~~q~~~~ 75 (166)
T cd03223 1 IELENLSLATPDGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----EDLLFLPQRPYL 75 (166)
T ss_pred CEEEEEEEEcCCCCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----ceEEEECCCCcc
Confidence 468999999976678999999999999999999999999999999999999999999999873 579999999999
Q ss_pred CCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000711 525 AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDE 604 (1338)
Q Consensus 525 ~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDE 604 (1338)
+++|++||+.++ . ..+||||||||++||||++++|++++|||
T Consensus 76 ~~~tv~~nl~~~------------------------------~--------~~~LS~G~~~rv~laral~~~p~~lllDE 117 (166)
T cd03223 76 PLGTLREQLIYP------------------------------W--------DDVLSGGEQQRLAFARLLLHKPKFVFLDE 117 (166)
T ss_pred ccccHHHHhhcc------------------------------C--------CCCCCHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 889999999763 1 25799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHccCCeEEEEecChhhHhhcceEEEccCCCce
Q 000711 605 CTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGEW 653 (1338)
Q Consensus 605 pts~LD~~~~~~i~~~l~~~~~t~i~itH~~~~~~~~d~i~~l~~~g~~ 653 (1338)
||++||+.+.+.+.+.+++.++|+|++||+++....+|++++++++|+|
T Consensus 118 Pt~~LD~~~~~~l~~~l~~~~~tiiivsh~~~~~~~~d~i~~l~~~~~~ 166 (166)
T cd03223 118 ATSALDEESEDRLYQLLKELGITVISVGHRPSLWKFHDRVLDLDGEGGW 166 (166)
T ss_pred CccccCHHHHHHHHHHHHHhCCEEEEEeCChhHHhhCCEEEEEcCCCCC
Confidence 9999999999999999988889999999999988899999999998865
No 145
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.2e-37 Score=304.87 Aligned_cols=199 Identities=30% Similarity=0.401 Sum_probs=172.0
Q ss_pred cEEEEeEEEEcCC---CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-----c----cc
Q 000711 444 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----S----DL 511 (1338)
Q Consensus 444 ~i~~~~v~~~~~~---~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~----~~ 511 (1338)
.|+++++++.-++ .-.+|++++|.|++||.++||||||||||||+-+++|+-.|++|+|.+.|++ + .+
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 5778888775543 3479999999999999999999999999999999999999999999999875 1 12
Q ss_pred -cccEEEEecCCC-CCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHH
Q 000711 512 -NKEIFYVPQRPY-TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1338)
Q Consensus 512 -~~~i~~v~Q~~~-l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1338)
.+++|||+|... +++.|-.||+..|..-..+...-..+...+.|+.+||.+-+..+| .+||||||||+||
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~~~~A~~lL~~vGLg~Rl~HyP--------~qLSGGEQQRVAi 157 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLELRGESSADSRAGAKALLEAVGLGKRLTHYP--------AQLSGGEQQRVAL 157 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhhcCCccccHHHHHHHHHHHhCcccccccCc--------cccCchHHHHHHH
Confidence 368999999976 477899999999876543322223445778999999999999998 7999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHH----HccCCeEEEEecChhhHhhcceEEEccCC
Q 000711 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKV----RAMGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 590 ARal~~~p~illLDEpts~LD~~~~~~i~~~l----~~~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
||||..+|++||-||||-+||.++.++|.+.+ ++.|.|.|+||||+.+...|||++.|..+
T Consensus 158 ARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~Rc~R~~r~~~G 222 (228)
T COG4181 158 ARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAARCDRQLRLRSG 222 (228)
T ss_pred HHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHhhhheeeeecc
Confidence 99999999999999999999999999888876 35699999999999999999999999763
No 146
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-37 Score=361.65 Aligned_cols=199 Identities=26% Similarity=0.395 Sum_probs=172.8
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC----ccccccEEEE
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYV 518 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~----~~~~~~i~~v 518 (1338)
..|+++||++.|+ +.++|+|+||++++||+++|+||||||||||+|+|+|+++|++|+|.++|.+ ...+++++||
T Consensus 5 ~~l~~~~l~~~~~-~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v 83 (351)
T PRK11432 5 NFVVLKNITKRFG-SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICMV 83 (351)
T ss_pred cEEEEEeEEEEEC-CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 4699999999995 4679999999999999999999999999999999999999999999999964 1124689999
Q ss_pred ecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000711 519 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1338)
Q Consensus 519 ~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1338)
||++.+|+ .|++||+.|+...........++++.++++.+++.++.++.| .+||||||||++|||||+.+|
T Consensus 84 fQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~--------~~LSgGq~QRVaLARaL~~~P 155 (351)
T PRK11432 84 FQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYV--------DQISGGQQQRVALARALILKP 155 (351)
T ss_pred eCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHHHcCC
Confidence 99999886 599999999754211111122457889999999999988887 689999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 598 KFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 598 ~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
++++||||||+||+.+.+.+.+.+++ .|+|+|+|||+++.+ ..+|+|++|+++
T Consensus 156 ~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G 213 (351)
T PRK11432 156 KVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKG 213 (351)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999887753 489999999999876 679999999863
No 147
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-37 Score=329.53 Aligned_cols=200 Identities=22% Similarity=0.244 Sum_probs=166.6
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEc
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~Vp 1178 (1338)
.+++++|+..|++ ..||+|+||+|++||.|+|+||||||||||++++.||..|++|+|.++|..+... ...++||+
T Consensus 3 ~l~i~~v~~~f~~-~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p---~~~~~~vF 78 (248)
T COG1116 3 LLEIEGVSKSFGG-VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP---GPDIGYVF 78 (248)
T ss_pred eEEEEeeEEEeCc-eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC---CCCEEEEe
Confidence 5889999999976 7899999999999999999999999999999999999999999999999987433 24689999
Q ss_pred CCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1179 QRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1179 QdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
|++.||+ -|+++|+.+|..... . ......+.+.++|+.|||..+-++ +..+||
T Consensus 79 Q~~~LlPW~Tv~~NV~l~l~~~~----------~------~~~e~~~~a~~~L~~VgL~~~~~~----------~P~qLS 132 (248)
T COG1116 79 QEDALLPWLTVLDNVALGLELRG----------K------SKAEARERAKELLELVGLAGFEDK----------YPHQLS 132 (248)
T ss_pred ccCcccchhhHHhhheehhhccc----------c------chHhHHHHHHHHHHHcCCcchhhc----------CccccC
Confidence 9999998 699999987643100 0 000012345677888998665444 346799
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHH----HhcCCeEEEeccCC-CCcccccceEEEecCC
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLA----KDMGITFVTSSQRP-ALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~----~~~~~TvI~IAHRl-~~i~~~d~~l~l~~g~ 1328 (1338)
||||||+|||||++.+|++|+||||-+|||+-|...+|+.+ ++.++||+.|+|.. +-+-..|++++|.++-
T Consensus 133 GGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P 208 (248)
T COG1116 133 GGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRP 208 (248)
T ss_pred hHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCC
Confidence 99999999999999999999999999999999998887643 44689999999999 4788899999996543
No 148
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-37 Score=341.36 Aligned_cols=197 Identities=30% Similarity=0.438 Sum_probs=167.2
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC----ccccccEEEEec
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYVPQ 520 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~----~~~~~~i~~v~Q 520 (1338)
++++|+++.|++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+||
T Consensus 1 l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q 79 (213)
T cd03259 1 LELKGLSKTYGS-VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQ 79 (213)
T ss_pred CeeeeeEEEeCC-eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEcC
Confidence 468999999864 689999999999999999999999999999999999999999999999864 113457999999
Q ss_pred CCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000711 521 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1338)
Q Consensus 521 ~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1338)
+|.++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||||+.+|++
T Consensus 80 ~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrl~la~al~~~p~~ 151 (213)
T cd03259 80 DYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYP--------HELSGGQQQRVALARALAREPSL 151 (213)
T ss_pred chhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcCh--------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 998775 699999987532111001112346788999999998887766 68999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 600 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 600 llLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
+||||||++||+.+.+.+++.+++ .|+|+|++||+++.+ ..||++++|+++
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G 207 (213)
T cd03259 152 LLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEG 207 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECC
Confidence 999999999999999999998764 389999999999876 579999999863
No 149
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.2e-37 Score=340.70 Aligned_cols=197 Identities=30% Similarity=0.438 Sum_probs=168.6
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc---------cccccE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 515 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~~~i 515 (1338)
++++|+++.|++++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 2 l~~~~l~~~~~~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 81 (214)
T TIGR02673 2 IEFHNVSKAYPGGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRRI 81 (214)
T ss_pred EEEEeeeEEeCCCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhhe
Confidence 78999999996457899999999999999999999999999999999999999999999998641 134679
Q ss_pred EEEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 516 FYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 516 ~~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
+|+||+|.++. .|++||+.++...........++++.++++.+++.+..++.+ .+||||||||++|||||+
T Consensus 82 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~ 153 (214)
T TIGR02673 82 GVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP--------EQLSGGEQQRVAIARAIV 153 (214)
T ss_pred EEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHHHHHHh
Confidence 99999998875 699999987532110001112456788999999988777765 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
.+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 154 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~ 212 (214)
T TIGR02673 154 NSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDD 212 (214)
T ss_pred CCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecC
Confidence 99999999999999999999999998865 4899999999999876 6899999976
No 150
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.5e-37 Score=340.25 Aligned_cols=197 Identities=25% Similarity=0.337 Sum_probs=168.1
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc---------cccccE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 515 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~~~i 515 (1338)
++++|+++.|++++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.+
T Consensus 1 l~~~~l~~~~~~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 80 (214)
T cd03292 1 IEFINVTKTYPNGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRKI 80 (214)
T ss_pred CEEEEEEEEeCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHhe
Confidence 46899999997556899999999999999999999999999999999999999999999998641 134579
Q ss_pred EEEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 516 FYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 516 ~~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
+|+||+|.++. .|++||+.++...........++++.++++.+++++..++.+ .+||||||||++||||++
T Consensus 81 ~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~ 152 (214)
T cd03292 81 GVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALP--------AELSGGEQQRVAIARAIV 152 (214)
T ss_pred EEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh--------hhcCHHHHHHHHHHHHHH
Confidence 99999998877 599999987532111001112356788999999988877765 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
++|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 153 ~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~ 211 (214)
T cd03292 153 NSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALER 211 (214)
T ss_pred cCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 99999999999999999999999988764 4899999999999886 5899999976
No 151
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-37 Score=351.43 Aligned_cols=199 Identities=24% Similarity=0.327 Sum_probs=171.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------cccccEEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEIFY 517 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i~~ 517 (1338)
.++++||++.|+++.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++|
T Consensus 4 ~l~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 83 (274)
T PRK13647 4 IIEVEDLHFRYKDGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGL 83 (274)
T ss_pred eEEEEEEEEEeCCCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEE
Confidence 589999999997556899999999999999999999999999999999999999999999999641 23467999
Q ss_pred EecCC--CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000711 518 VPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1338)
Q Consensus 518 v~Q~~--~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1338)
+||+| .++..|++||+.++............+++.++++.+++.+..++.| .+||||||||++|||||+.
T Consensus 84 v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~--------~~LSgG~~qrv~laraL~~ 155 (274)
T PRK13647 84 VFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP--------YHLSYGQKKRVAIAGVLAM 155 (274)
T ss_pred EecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh--------hhCCHHHHHHHHHHHHHHc
Confidence 99998 5778899999988632111001112356788999999998888877 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 596 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 596 ~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+ +.||++++|+++
T Consensus 156 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 156 DPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred CCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999988764 389999999999987 579999999863
No 152
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-37 Score=344.78 Aligned_cols=196 Identities=27% Similarity=0.365 Sum_probs=166.6
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc---------cccccE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 515 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~~~i 515 (1338)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. .+++.+
T Consensus 1 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i 79 (235)
T cd03261 1 IELRGLTKSFG-GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRM 79 (235)
T ss_pred CeEEEEEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcce
Confidence 46899999995 46799999999999999999999999999999999999999999999998541 235679
Q ss_pred EEEecCCCCCCC-CHHHHhcCCCCCCc-ccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000711 516 FYVPQRPYTAVG-TLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1338)
Q Consensus 516 ~~v~Q~~~l~~~-tl~eni~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1338)
+|+||++.++.. |++||+.++..... .......+++.++++.+++.+..++.+ .+||||||||++|||||
T Consensus 80 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~ia~al 151 (235)
T cd03261 80 GMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYP--------AELSGGMKKRVALARAL 151 (235)
T ss_pred EEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHH
Confidence 999999988875 99999987532110 000112345778899999988777765 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 594 ~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
+.+|+++||||||++||+.+++.+++.+++ .|+|+|+|||+++.+. .||++++|++
T Consensus 152 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~ 212 (235)
T cd03261 152 ALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYD 212 (235)
T ss_pred hcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEEC
Confidence 999999999999999999999999988764 3899999999999775 6999999986
No 153
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-37 Score=324.10 Aligned_cols=202 Identities=30% Similarity=0.399 Sum_probs=160.5
Q ss_pred ceEEeeeEEeCCCcc---ccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc---CCcc
Q 000711 1099 SISFSKLDIITPSQK---LLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGC 1172 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~---~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~---~lr~ 1172 (1338)
.++.+|++++|+... ++|+||||+|.+||++||||+||||||||.++|.|+-+|++|+|.+||.++.... ..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 478999999998765 7999999999999999999999999999999999999999999999998776642 2345
Q ss_pred cEEEEcCCCCC--C-CCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhh-hhhhcccCcc
Q 000711 1173 GIFYVPQRPYT--C-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYL-LEREEVGWDA 1248 (1338)
Q Consensus 1173 ~i~~VpQdP~L--F-~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~-i~~~~~Gldt 1248 (1338)
.+-+|+|||+- - .-|+++-|.-|. ...+.++ ....+.++++.|+|..- ..+
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl----------~~~~~~~--------~~~~i~~~L~~VgL~~~~l~R------- 137 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPL----------RPHGLSK--------SQQRIAELLDQVGLPPSFLDR------- 137 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhh----------ccCCccH--------HHHHHHHHHHHcCCCHHHHhc-------
Confidence 79999999983 2 235555553222 1111110 12336778888887532 222
Q ss_pred cCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHH----HhcCCeEEEeccCCCCcc-cccceEE
Q 000711 1249 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLA----KDMGITFVTSSQRPALIP-FHSLELR 1323 (1338)
Q Consensus 1249 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~----~~~~~TvI~IAHRl~~i~-~~d~~l~ 1323 (1338)
+..+||||||||+||||||.-+||+||||||||+||+-+++.|.+++ ++.+.|.|.|+|.++.+. ++|++.+
T Consensus 138 ---~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~V 214 (252)
T COG1124 138 ---RPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAV 214 (252)
T ss_pred ---CchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheee
Confidence 34569999999999999999999999999999999999999877654 346889999999998664 5999999
Q ss_pred EecCC
Q 000711 1324 LIDGE 1328 (1338)
Q Consensus 1324 l~~g~ 1328 (1338)
+..|.
T Consensus 215 m~~G~ 219 (252)
T COG1124 215 MDNGQ 219 (252)
T ss_pred eeCCe
Confidence 97653
No 154
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=4.3e-37 Score=337.91 Aligned_cols=194 Identities=32% Similarity=0.449 Sum_probs=165.6
Q ss_pred EEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-ccccccEEEEecCCCC-
Q 000711 447 FSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQRPYT- 524 (1338)
Q Consensus 447 ~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-~~~~~~i~~v~Q~~~l- 524 (1338)
++||++.|++ +++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|+||+|.+
T Consensus 2 ~~~l~~~~~~-~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~~~ 80 (213)
T cd03235 2 VEDLTVSYGG-HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRSID 80 (213)
T ss_pred cccceeEECC-EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEeccccccc
Confidence 6789998864 679999999999999999999999999999999999999999999999865 2345679999999876
Q ss_pred --CCCCHHHHhcCCCCCCc----ccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000711 525 --AVGTLRDQLIYPLTSDQ----EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1338)
Q Consensus 525 --~~~tl~eni~~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1338)
+..|++||+.++..... .......+++.++++.++++++.++.+ .+||||||||++|||||+.+|+
T Consensus 81 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~la~al~~~p~ 152 (213)
T cd03235 81 RDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI--------GELSGGQQQRVLLARALVQDPD 152 (213)
T ss_pred cCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc--------ccCCHHHHHHHHHHHHHHcCCC
Confidence 45799999987643210 001112456788999999988877765 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 599 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 599 illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 153 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~ 207 (213)
T cd03235 153 LLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNR 207 (213)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcC
Confidence 9999999999999999999988764 4789999999999875 6899999975
No 155
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=5.2e-37 Score=339.40 Aligned_cols=197 Identities=25% Similarity=0.357 Sum_probs=167.0
Q ss_pred EEEEeEEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-c--------cc
Q 000711 445 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-D--------LN 512 (1338)
Q Consensus 445 i~~~~v~~~~~~~---~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-~--------~~ 512 (1338)
++++||++.|+++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . ++
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 6899999999642 5799999999999999999999999999999999999999999999998641 1 12
Q ss_pred -ccEEEEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000711 513 -KEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1338)
Q Consensus 513 -~~i~~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1338)
+.++|+||++.++. .|++||+.++............+++.++++.+++++..++.+ ..||||||||++||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la 153 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHRP--------SELSGGERQRVAIA 153 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHHH
Confidence 56999999998875 699999987421110000112346778999999988877765 68999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHhhcceEEEccC
Q 000711 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 591 Ral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~~~d~i~~l~~ 649 (1338)
||++.+|+++||||||++||+.++..+.+.+++ .++|+|++||+++.+..+|++++|++
T Consensus 154 ral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~ 216 (221)
T TIGR02211 154 RALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKD 216 (221)
T ss_pred HHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeC
Confidence 999999999999999999999999999988763 37999999999999888999999986
No 156
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.5e-37 Score=335.69 Aligned_cols=207 Identities=25% Similarity=0.291 Sum_probs=167.5
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEE
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFY 1176 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~ 1176 (1338)
.++.+|++|.|+ .+++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.+||.||.++ ..+.++|+|
T Consensus 2 ~L~~~~ls~~y~-~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~ 80 (258)
T COG1120 2 MLEVENLSFGYG-GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAY 80 (258)
T ss_pred eeEEEEEEEEEC-CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEE
Confidence 478999999996 67899999999999999999999999999999999999999999999999999988 345557999
Q ss_pred EcCCCCC-CCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCC
Q 000711 1177 VPQRPYT-CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1338)
Q Consensus 1177 VpQdP~L-F~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 1255 (1338)
|||+|.. |.-|++|-+.++..... .......+...+.+.++++.+++.++.++. -..
T Consensus 81 vpQ~~~~~~~~tV~d~V~~GR~p~~------------~~~~~~~~~D~~~v~~aL~~~~~~~la~r~----------~~~ 138 (258)
T COG1120 81 VPQSPSAPFGLTVYELVLLGRYPHL------------GLFGRPSKEDEEIVEEALELLGLEHLADRP----------VDE 138 (258)
T ss_pred eccCCCCCCCcEEeehHhhcCCccc------------ccccCCCHhHHHHHHHHHHHhCcHHHhcCc----------ccc
Confidence 9999754 55689988865421100 000000111122466678888887766552 246
Q ss_pred CChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHH----hcCCeEEEeccCCC-CcccccceEEEecCC
Q 000711 1256 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPA-LIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1256 LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~----~~~~TvI~IAHRl~-~i~~~d~~l~l~~g~ 1328 (1338)
||||||||+.|||||.++|+||+||||||+||...+-.+.++++ +.|+|+|+|.|.++ ..+|+|+++.|.+|+
T Consensus 139 LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~ 216 (258)
T COG1120 139 LSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGK 216 (258)
T ss_pred cChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCe
Confidence 99999999999999999999999999999999999877766553 46899999999996 789999999997765
No 157
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-37 Score=341.17 Aligned_cols=198 Identities=24% Similarity=0.360 Sum_probs=168.3
Q ss_pred cEEEEeEEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-c--------c
Q 000711 444 YIEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-D--------L 511 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~---~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-~--------~ 511 (1338)
.++++||++.|+++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 58999999999753 5799999999999999999999999999999999999999999999998641 1 1
Q ss_pred -cccEEEEecCCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHH
Q 000711 512 -NKEIFYVPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1338)
Q Consensus 512 -~~~i~~v~Q~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1338)
++.++|+||+|.++.. |++||+.++............+++.++++.+++.+..++.+ .+||||||||++|
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgG~~qrl~l 156 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHRP--------SELSGGERQRVAI 156 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCh--------hhCCHHHHHHHHH
Confidence 2569999999988765 99999987422110001112356788999999988777755 6899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHhhcceEEEccC
Q 000711 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 590 ARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~~~d~i~~l~~ 649 (1338)
|||++.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+..+|++++|++
T Consensus 157 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~ 220 (233)
T PRK11629 157 ARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRD 220 (233)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEEC
Confidence 9999999999999999999999999999988754 38999999999999988899999976
No 158
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3e-37 Score=338.76 Aligned_cols=196 Identities=29% Similarity=0.418 Sum_probs=164.7
Q ss_pred EEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------cccccEEEE
Q 000711 446 EFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEIFYV 518 (1338)
Q Consensus 446 ~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i~~v 518 (1338)
+++|+++.|+++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 368999988642 6799999999999999999999999999999999999999999999998641 234679999
Q ss_pred ecCC--CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccC
Q 000711 519 PQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 596 (1338)
Q Consensus 519 ~Q~~--~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~ 596 (1338)
||+| .++..|++||+.++...........++++.++++.+++.+..++.+ ..||||||||++|||||+++
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~laral~~~ 152 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRSP--------FTLSGGQKQRVAIAGVLAMD 152 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCCc--------ccCCHHHHHHHHHHHHHhcC
Confidence 9998 3677899999987532110000112345778899999988777765 68999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHhh-cceEEEccC
Q 000711 597 PKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAF-HDVVLSLDG 649 (1338)
Q Consensus 597 p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~~-~d~i~~l~~ 649 (1338)
|+++||||||++||+.+++.+.+.+++ .|+|+|++||+++.+.. ||++++|++
T Consensus 153 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 153 PDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999998764 37899999999998864 999999976
No 159
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-37 Score=348.65 Aligned_cols=202 Identities=23% Similarity=0.327 Sum_probs=172.6
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEc
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~Vp 1178 (1338)
.|+++||+..|.+.. +|+|+||+|+.||.++|+|||||||||++++|.||.+|++|+|.|||.|++++.-..++|++|+
T Consensus 3 ~i~l~~v~K~yg~~~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamVF 81 (338)
T COG3839 3 ELELKNVRKSFGSFE-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMVF 81 (338)
T ss_pred EEEEeeeEEEcCCce-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEEe
Confidence 589999999997655 9999999999999999999999999999999999999999999999999999966656899999
Q ss_pred CCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1179 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1179 QdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
|++-||+- |+++||.||.... +. ..+..+..+.++.+.+++.+++++.| .+||
T Consensus 82 Q~yALyPhmtV~~Niaf~Lk~~----------~~------~k~ei~~rV~eva~~L~l~~lL~r~P----------~~LS 135 (338)
T COG3839 82 QNYALYPHMTVYENIAFGLKLR----------GV------PKAEIDKRVKEVAKLLGLEHLLNRKP----------LQLS 135 (338)
T ss_pred CCccccCCCcHHHHhhhhhhhC----------CC------chHHHHHHHHHHHHHcCChhHHhcCc----------ccCC
Confidence 99999975 9999999985320 00 00112456777888889988888875 4699
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHH----HHHhcCCeEEEeccCC-CCcccccceEEEecC
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYR----LAKDMGITFVTSSQRP-ALIPFHSLELRLIDG 1327 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~----~~~~~~~TvI~IAHRl-~~i~~~d~~l~l~~g 1327 (1338)
||||||+||||||+|+|++++||||.|+||+.....+.. +-++.+.|+|.|+|+. +-+-..|++.++.+|
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G 210 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDG 210 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCC
Confidence 999999999999999999999999999999998765433 3334699999999998 688889999999643
No 160
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.7e-37 Score=359.77 Aligned_cols=198 Identities=25% Similarity=0.380 Sum_probs=172.3
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----cccccEEEEe
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVP 519 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~ 519 (1338)
.++++||++.|+ +..+|+|+||++++||+++|+||||||||||+|+|+|+.+|++|+|.++|.+. ..++.++|||
T Consensus 4 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~v~ 82 (353)
T TIGR03265 4 YLSIDNIRKRFG-AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGIVF 82 (353)
T ss_pred EEEEEEEEEEeC-CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 589999999996 46799999999999999999999999999999999999999999999999641 1246799999
Q ss_pred cCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000711 520 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1338)
Q Consensus 520 Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1338)
|++.+|+ .|++||+.|+............+++.++++.++++++.++.| .+||||||||++|||||+.+|+
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~--------~~LSgGq~QRvaLARaL~~~P~ 154 (353)
T TIGR03265 83 QSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYP--------GQLSGGQQQRVALARALATSPG 154 (353)
T ss_pred CCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 9998886 699999999754211111122457889999999999999877 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 599 FAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 599 illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
+++||||||+||+.+++.+.+.+++ .|+|+|+|||+++.+ ..+|++++|+++
T Consensus 155 llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G 211 (353)
T TIGR03265 155 LLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHG 211 (353)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999887754 489999999999976 579999999873
No 161
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-37 Score=354.71 Aligned_cols=206 Identities=23% Similarity=0.228 Sum_probs=169.9
Q ss_pred CCCcEEEEeEEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC-----CCccEEEeCCCCc-----
Q 000711 441 EANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS----- 509 (1338)
Q Consensus 441 ~~~~i~~~~v~~~~~~-~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~----- 509 (1338)
..+.|+++|+++.|++ .+++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.+.
T Consensus 77 ~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~ 156 (329)
T PRK14257 77 HANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKI 156 (329)
T ss_pred cCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccc
Confidence 3568999999999964 4689999999999999999999999999999999999996 5799999999752
Q ss_pred ---cccccEEEEecCCCCCCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHH
Q 000711 510 ---DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQ 585 (1338)
Q Consensus 510 ---~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQ 585 (1338)
.+++.++||||+|++|++|++|||.|+....... ....++.+.++++.+++.+.++.. ..+.+.+|||||||
T Consensus 157 ~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~----~~~~~~~LSgGqkq 232 (329)
T PRK14257 157 SSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDD----LDKAGNALSGGQQQ 232 (329)
T ss_pred chHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhh----hhCCcccCCHHHHH
Confidence 3467899999999999999999999853211100 001112357788888875433211 11346899999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhh-cceEEEccCC
Q 000711 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAF-HDVVLSLDGE 650 (1338)
Q Consensus 586 RlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~-~d~i~~l~~~ 650 (1338)
|++||||++++|+++||||||++||+++.+.+.+.+++ .++|+|+|||+++++.. ||+|++|+++
T Consensus 233 Rl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G 300 (329)
T PRK14257 233 RLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQG 300 (329)
T ss_pred HHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999888865 37999999999999875 9999999873
No 162
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-37 Score=353.32 Aligned_cols=201 Identities=21% Similarity=0.270 Sum_probs=168.7
Q ss_pred CCcEEEEeEEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC--c------
Q 000711 442 ANYIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG--S------ 509 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~~----~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~--~------ 509 (1338)
...|+++||++.|+++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ .
T Consensus 19 ~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~ 98 (320)
T PRK13631 19 DIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHE 98 (320)
T ss_pred CceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccc
Confidence 3469999999999742 469999999999999999999999999999999999999999999999843 1
Q ss_pred --------------cccccEEEEecCC--CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCc-hHHhcCCCCcc
Q 000711 510 --------------DLNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKE 572 (1338)
Q Consensus 510 --------------~~~~~i~~v~Q~~--~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~ 572 (1338)
.++++++||+|+| +++..|++|||.++............+++.++++.+++. ++.++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~---- 174 (320)
T PRK13631 99 LITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSP---- 174 (320)
T ss_pred ccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCc----
Confidence 2356799999998 688899999998864211100111224567788899996 5666654
Q ss_pred ccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEcc
Q 000711 573 INWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLD 648 (1338)
Q Consensus 573 ~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l~ 648 (1338)
.+||||||||++|||||+.+|+++||||||++||+.++..+++.+++ .|+|+|+|||+++.+ ..||++++|+
T Consensus 175 ----~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~ 250 (320)
T PRK13631 175 ----FGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMD 250 (320)
T ss_pred ----ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 68999999999999999999999999999999999999999998753 489999999999976 6799999998
Q ss_pred CC
Q 000711 649 GE 650 (1338)
Q Consensus 649 ~~ 650 (1338)
++
T Consensus 251 ~G 252 (320)
T PRK13631 251 KG 252 (320)
T ss_pred CC
Confidence 73
No 163
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-37 Score=350.53 Aligned_cols=197 Identities=25% Similarity=0.357 Sum_probs=167.0
Q ss_pred EEEEeEEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc--------ccc
Q 000711 445 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLN 512 (1338)
Q Consensus 445 i~~~~v~~~~~~~----~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~--------~~~ 512 (1338)
++++||++.|+++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..+
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 7899999999753 4799999999999999999999999999999999999999999999999641 234
Q ss_pred ccEEEEecCC--CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCc--hHHhcCCCCccccCCCCCChhHHHHHH
Q 000711 513 KEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE--YLLDRYPPEKEINWGDELSLGEQQRLG 588 (1338)
Q Consensus 513 ~~i~~v~Q~~--~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1338)
++++||||+| .++..|++||+.++............+++.++++.++++ ++.++.+ ..||||||||++
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~--------~~LSgGq~qrv~ 154 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSP--------FELSGGQKRRVA 154 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCc--------ccCCHHHHHHHH
Confidence 6799999998 567889999998753211110111234577899999997 5566654 689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 589 lARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
|||||+.+|+++||||||++||+.+...+++.+++ .|+|+|++||+++.+ ..||+|++|++
T Consensus 155 iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~ 220 (287)
T PRK13637 155 IAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNK 220 (287)
T ss_pred HHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999988753 389999999999987 57999999986
No 164
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-37 Score=349.37 Aligned_cols=198 Identities=28% Similarity=0.363 Sum_probs=170.2
Q ss_pred cEEEEeEEEEcCC--CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------cccccE
Q 000711 444 YIEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEI 515 (1338)
Q Consensus 444 ~i~~~~v~~~~~~--~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i 515 (1338)
.++++||++.|++ ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 5899999999974 25699999999999999999999999999999999999999999999999641 235679
Q ss_pred EEEecCCC--CCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000711 516 FYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1338)
Q Consensus 516 ~~v~Q~~~--l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1338)
+|+||+|. ++..|++|||.++...........++++.++++.++++++.++.| .+||||||||++|||||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LSgGq~qrv~lAral 155 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP--------ARLSGGQKQRVAIAGAV 155 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc--------ccCCHHHHHHHHHHHHH
Confidence 99999983 566799999998643211101112356788999999998888876 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHhhcceEEEccC
Q 000711 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 594 ~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~~~d~i~~l~~ 649 (1338)
+.+|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+..||++++|++
T Consensus 156 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~ 215 (279)
T PRK13650 156 AMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKN 215 (279)
T ss_pred HcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEEC
Confidence 999999999999999999999999887753 38999999999998889999999976
No 165
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-36 Score=342.05 Aligned_cols=196 Identities=24% Similarity=0.299 Sum_probs=167.0
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-cccccEEEEecCCC
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-DLNKEIFYVPQRPY 523 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-~~~~~i~~v~Q~~~ 523 (1338)
++++|+++.|++ +++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..+..++|+||++.
T Consensus 2 l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~~ 80 (255)
T PRK11248 2 LQISHLYADYGG-KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQNEG 80 (255)
T ss_pred EEEEEEEEEeCC-eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeCCCc
Confidence 789999999964 6899999999999999999999999999999999999999999999998652 23346999999998
Q ss_pred CCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000711 524 TAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAIL 602 (1338)
Q Consensus 524 l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illL 602 (1338)
++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||||+++|+++||
T Consensus 81 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgGq~qrl~laral~~~p~lllL 152 (255)
T PRK11248 81 LLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKRYI--------WQLSGGQRQRVGIARALAANPQLLLL 152 (255)
T ss_pred cCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhCCh--------hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 776 699999987532111001112346788999999988777655 68999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 603 DECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 603 DEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
||||++||+.+...+.+.+++ .|+|+|++||+++.+ ..||++++|++
T Consensus 153 DEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~ 204 (255)
T PRK11248 153 DEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSP 204 (255)
T ss_pred eCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 999999999999999988764 389999999999987 47999999985
No 166
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.4e-37 Score=341.17 Aligned_cols=198 Identities=27% Similarity=0.387 Sum_probs=167.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----cccccEEEEe
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVP 519 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~ 519 (1338)
.++++||++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+|
T Consensus 2 ~l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~ 80 (239)
T cd03296 2 SIEVRNVSKRFGD-FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVF 80 (239)
T ss_pred EEEEEeEEEEECC-EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEe
Confidence 3789999999964 6899999999999999999999999999999999999999999999998641 1245799999
Q ss_pred cCCCCCC-CCHHHHhcCCCCCCcc----cCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 520 QRPYTAV-GTLRDQLIYPLTSDQE----VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 520 Q~~~l~~-~tl~eni~~~~~~~~~----~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
|+|.++. .|++||+.++...... ......+++.++++.+++++..++.+ .+||||||||++|||||+
T Consensus 81 q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~ 152 (239)
T cd03296 81 QHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP--------AQLSGGQRQRVALARALA 152 (239)
T ss_pred cCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh--------hhCCHHHHHHHHHHHHHh
Confidence 9998875 6999999876421110 00112345678899999988877765 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..+|++++|+++
T Consensus 153 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G 213 (239)
T cd03296 153 VEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKG 213 (239)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999999988764 378999999999976 579999999863
No 167
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=4.8e-37 Score=338.94 Aligned_cols=197 Identities=24% Similarity=0.310 Sum_probs=167.6
Q ss_pred EEEEeEEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-----ccccccEE
Q 000711 445 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIF 516 (1338)
Q Consensus 445 i~~~~v~~~~~~~---~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~ 516 (1338)
++++||++.|++. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 6899999999753 179999999999999999999999999999999999999999999999864 12356799
Q ss_pred EEecCCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000711 517 YVPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1338)
Q Consensus 517 ~v~Q~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1338)
|+||+|.++.. |++||+.++............+++.++++.+++.+..++.+ .+||||||||++||||++.
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~ 153 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDRRV--------GGFSTGMRQKVAIARALVH 153 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhhhh--------hhcCHHHHHHHHHHHHHhc
Confidence 99999988874 99999976432111001112456788999999988877755 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 596 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 596 ~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 154 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~ 211 (218)
T cd03266 154 DPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHR 211 (218)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999988764 4899999999998764 7999999976
No 168
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=9.3e-37 Score=337.39 Aligned_cols=198 Identities=25% Similarity=0.334 Sum_probs=167.5
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc---------cccccE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 515 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~~~i 515 (1338)
++++|+++.|++++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 81 (222)
T PRK10908 2 IRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQI 81 (222)
T ss_pred EEEEeeEEEecCCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhhe
Confidence 78999999996557899999999999999999999999999999999999999999999998641 134679
Q ss_pred EEEecCCCC-CCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 516 FYVPQRPYT-AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 516 ~~v~Q~~~l-~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
+|+||+|.+ +..|++||+.++............+++.++++.+++.+..++.+ .+||||||||++||||++
T Consensus 82 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~ 153 (222)
T PRK10908 82 GMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFP--------IQLSGGEQQRVGIARAVV 153 (222)
T ss_pred EEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCc--------hhCCHHHHHHHHHHHHHH
Confidence 999999986 56799999987532111001112335678899999988877765 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
++|+++||||||++||+.+.+.+.+.+++ .+.|+|++||+++.+. .+|++++|+++
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G 213 (222)
T PRK10908 154 NKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDG 213 (222)
T ss_pred cCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999999887764 4789999999999886 58999999863
No 169
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=8.6e-37 Score=335.66 Aligned_cols=196 Identities=24% Similarity=0.375 Sum_probs=166.2
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----cccccEEEEec
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 520 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~Q 520 (1338)
++++|+++.|++ +++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+||
T Consensus 1 i~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~q 79 (213)
T cd03301 1 VELENVTKRFGN-VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVFQ 79 (213)
T ss_pred CEEEeeEEEECC-eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEec
Confidence 468999999864 6899999999999999999999999999999999999999999999998641 12357999999
Q ss_pred CCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000711 521 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1338)
Q Consensus 521 ~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1338)
++.++. .|++||+.++...........++++.++++.+++.+..++.+ .+||||||||++||||++++|++
T Consensus 80 ~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qr~~laral~~~p~l 151 (213)
T cd03301 80 NYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKP--------KQLSGGQRQRVALGRAIVREPKV 151 (213)
T ss_pred ChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCCh--------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 998875 699999987532111001112346678899999988887766 68999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 600 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 600 llLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
+||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .+|+++++++
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~ 206 (213)
T cd03301 152 FLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMND 206 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEEC
Confidence 999999999999999999988764 3899999999998765 6899999976
No 170
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=6.1e-37 Score=358.17 Aligned_cols=200 Identities=22% Similarity=0.307 Sum_probs=172.2
Q ss_pred CCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCc--cEEEeCCCCc----cccccE
Q 000711 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVS--GHIAKPGVGS----DLNKEI 515 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~--G~i~~~~~~~----~~~~~i 515 (1338)
.+.++++||++.|+ +.++|+|+||+|++||+++|+||||||||||+|+|+|+.+|++ |+|.++|.+. ..++.|
T Consensus 3 ~~~l~~~~l~~~~~-~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~i 81 (362)
T TIGR03258 3 CGGIRIDHLRVAYG-ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGL 81 (362)
T ss_pred ceEEEEEEEEEEEC-CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCE
Confidence 35799999999996 4679999999999999999999999999999999999999999 9999998641 124679
Q ss_pred EEEecCCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 516 FYVPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 516 ~~v~Q~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
+||+|++.+|.. |++||+.|+...........+.++.++++.++|+++.++.| .+||||||||++|||||+
T Consensus 82 g~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~--------~~LSgGq~QRvaLARAL~ 153 (362)
T TIGR03258 82 ALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP--------AQLSGGMQQRIAIARAIA 153 (362)
T ss_pred EEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh--------hhCCHHHHHHHHHHHHHh
Confidence 999999988865 99999998753211111122356788999999999999887 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc---c--CCeEEEEecChhhH-hhcceEEEccCC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---M--GTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~--~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
.+|++++||||||+||+...+.+.+.+++ . |+|+|+|||+++.+ ..+|+|++|+++
T Consensus 154 ~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G 215 (362)
T TIGR03258 154 IEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDG 215 (362)
T ss_pred cCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999999887753 2 78999999999976 579999999863
No 171
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-36 Score=339.60 Aligned_cols=193 Identities=21% Similarity=0.307 Sum_probs=169.6
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-ccccccEEEEecC
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQR 521 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-~~~~~~i~~v~Q~ 521 (1338)
..|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|++|+
T Consensus 11 ~~l~i~~l~~~~~-~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~q~ 89 (257)
T PRK11247 11 TPLLLNAVSKRYG-ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMFQD 89 (257)
T ss_pred CcEEEEEEEEEEC-CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEecC
Confidence 4699999999996 4689999999999999999999999999999999999999999999998754 3446689999999
Q ss_pred CCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000711 522 PYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFA 600 (1338)
Q Consensus 522 ~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~il 600 (1338)
+.++. .|++||+.++... ..++++.++++.+++.+..++.+ .+||||||||++|||||+++|+++
T Consensus 90 ~~l~~~~tv~enl~~~~~~------~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgGqkqrl~laraL~~~p~ll 155 (257)
T PRK11247 90 ARLLPWKKVIDNVGLGLKG------QWRDAALQALAAVGLADRANEWP--------AALSGGQKQRVALARALIHRPGLL 155 (257)
T ss_pred ccCCCCCcHHHHHHhcccc------hHHHHHHHHHHHcCChhHhcCCh--------hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 98876 6999999886321 12457788999999988777765 689999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 601 ILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 601 lLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
||||||++||+.+...+.+.+++ .++|+|+|||+++.+ ..||++++|+++
T Consensus 156 lLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G 210 (257)
T PRK11247 156 LLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEG 210 (257)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 99999999999999999888754 389999999999986 579999999863
No 172
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1e-36 Score=357.47 Aligned_cols=199 Identities=26% Similarity=0.402 Sum_probs=172.0
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----cccccEEEE
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYV 518 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v 518 (1338)
..++++|+++.|+ +.++++|+||++++||+++|+||||||||||+|+|+|+.+|++|+|.++|.+. ..++.++||
T Consensus 13 ~~L~l~~l~~~~~-~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v 91 (375)
T PRK09452 13 PLVELRGISKSFD-GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVNTV 91 (375)
T ss_pred ceEEEEEEEEEEC-CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 4699999999996 46799999999999999999999999999999999999999999999999651 124679999
Q ss_pred ecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000711 519 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1338)
Q Consensus 519 ~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1338)
||++.+|+ .|++|||.|+............+++.++++.++++++.++.| .+||||||||++|||||+.+|
T Consensus 92 fQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p--------~~LSgGq~QRVaLARaL~~~P 163 (375)
T PRK09452 92 FQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP--------HQLSGGQQQRVAIARAVVNKP 163 (375)
T ss_pred ecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh--------hhCCHHHHHHHHHHHHHhcCC
Confidence 99998875 599999999754211111112346788999999999999988 689999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 598 KFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 598 ~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
+++|||||||+||...+..+.+.+++ .|+|+|+|||+++.+ ..+|+|++|+++
T Consensus 164 ~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G 221 (375)
T PRK09452 164 KVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDG 221 (375)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999887754 489999999999875 579999999863
No 173
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.3e-36 Score=337.95 Aligned_cols=200 Identities=26% Similarity=0.418 Sum_probs=172.0
Q ss_pred EEEEeEEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEE
Q 000711 445 IEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1338)
Q Consensus 445 i~~~~v~~~~~~-~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 517 (1338)
++++|+++.|++ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 468999999964 4679999999999999999999999999999999999999999999999864 123567999
Q ss_pred EecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHc
Q 000711 518 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 518 v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~ 594 (1338)
+||++++++.|++||+.++... ....++.+.++..++.++++.+|.+... ....+||||||||++||||++
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~------~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~ 154 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPG------MSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALI 154 (237)
T ss_pred EcCCchhccchHHHHhhccCCC------CCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHh
Confidence 9999999999999999886421 2344566777778888888776543221 246799999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+..+|++++++++
T Consensus 155 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G 212 (237)
T cd03252 155 HNPRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKG 212 (237)
T ss_pred hCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECC
Confidence 99999999999999999999999998865 389999999999999889999999863
No 174
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-37 Score=356.81 Aligned_cols=199 Identities=27% Similarity=0.373 Sum_probs=169.6
Q ss_pred cEEEEeEEEEcCC---CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc---------cc
Q 000711 444 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DL 511 (1338)
Q Consensus 444 ~i~~~~v~~~~~~---~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~ 511 (1338)
+|+++||++.|++ ++++|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. ..
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 3789999999972 36899999999999999999999999999999999999999999999998641 12
Q ss_pred cccEEEEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000711 512 NKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1338)
Q Consensus 512 ~~~i~~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1338)
+++++|+||++.++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++||
T Consensus 81 ~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LSgGq~qRv~lA 152 (343)
T PRK11153 81 RRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRYP--------AQLSGGQKQRVAIA 152 (343)
T ss_pred hcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh--------hhCCHHHHHHHHHH
Confidence 467999999998876 699999987632111001112346778999999998888766 68999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 591 Ral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
|||+++|+++||||||++||+.+...+++.+++ .|+|+|++||+++.+. .||++++|+++
T Consensus 153 raL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G 217 (343)
T PRK11153 153 RALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAG 217 (343)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999998764 3899999999999875 69999999863
No 175
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.4e-36 Score=341.10 Aligned_cols=197 Identities=24% Similarity=0.352 Sum_probs=167.7
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc---------cccccE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 515 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~~~i 515 (1338)
++++||++.|+.++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 2 l~~~~l~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 81 (243)
T TIGR02315 2 LEVENLSKVYPNGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRRI 81 (243)
T ss_pred eEEEeeeeecCCCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhhe
Confidence 68999999996356799999999999999999999999999999999999999999999998641 135679
Q ss_pred EEEecCCCCCC-CCHHHHhcCCCCCCc--------ccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHH
Q 000711 516 FYVPQRPYTAV-GTLRDQLIYPLTSDQ--------EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQR 586 (1338)
Q Consensus 516 ~~v~Q~~~l~~-~tl~eni~~~~~~~~--------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQR 586 (1338)
+|+||++.++. .|++||+.++..... ......++++.++++.+++.+..++.+ .+||||||||
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qr 153 (243)
T TIGR02315 82 GMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRA--------DQLSGGQQQR 153 (243)
T ss_pred EEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCc--------ccCCHHHHHH
Confidence 99999998775 699999987542110 001122456788899999988777655 6899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 587 lalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
++|||||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..||++++|++
T Consensus 154 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 154 VAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKA 221 (243)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEEC
Confidence 9999999999999999999999999999999888754 378999999999987 57999999986
No 176
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=7.1e-37 Score=338.10 Aligned_cols=198 Identities=21% Similarity=0.243 Sum_probs=167.6
Q ss_pred EEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-----cccccEEEE
Q 000711 445 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-----DLNKEIFYV 518 (1338)
Q Consensus 445 i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-----~~~~~i~~v 518 (1338)
|+++||++.|+++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .++++++|+
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v 80 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYC 80 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEe
Confidence 4789999999653 6899999999999999999999999999999999999999999999998651 235679999
Q ss_pred ecCCCCC-CCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000711 519 PQRPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1338)
Q Consensus 519 ~Q~~~l~-~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1338)
+|++.++ ..|++||+.++............+++.++++.+++.+..++.+ .+||||||||++||||++.+|
T Consensus 81 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~~~p 152 (220)
T cd03263 81 PQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANKRA--------RTLSGGMKRKLSLAIALIGGP 152 (220)
T ss_pred cCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhChh--------hhCCHHHHHHHHHHHHHhcCC
Confidence 9999887 5799999987532111000112346778899999987777654 689999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 598 KFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 598 ~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|++++++++
T Consensus 153 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g 208 (220)
T cd03263 153 SVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDG 208 (220)
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECC
Confidence 99999999999999999999998875 3689999999999875 69999999863
No 177
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.8e-36 Score=333.55 Aligned_cols=200 Identities=31% Similarity=0.440 Sum_probs=176.0
Q ss_pred cEEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEE
Q 000711 444 YIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~ 516 (1338)
.++++|+++.|+++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (221)
T cd03244 2 DIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRIS 81 (221)
T ss_pred cEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhEE
Confidence 48899999999753 589999999999999999999999999999999999999999999999864 13456899
Q ss_pred EEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHH
Q 000711 517 YVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLF 593 (1338)
Q Consensus 517 ~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal 593 (1338)
|+||+|.++.+|++||+.+... ...+++.++++.+++.+.+++++.+..+ .+...||||||||++||||+
T Consensus 82 ~~~q~~~l~~~tv~enl~~~~~-------~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral 154 (221)
T cd03244 82 IIPQDPVLFSGTIRSNLDPFGE-------YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARAL 154 (221)
T ss_pred EECCCCccccchHHHHhCcCCC-------CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHH
Confidence 9999999999999999975421 2456788889999999988876654332 35789999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 594 ~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
+++|+++||||||++||+.+++.+.+.+++ .+.|+|++||+++.+..+|++++|+++
T Consensus 155 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g 213 (221)
T cd03244 155 LRKSKILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKG 213 (221)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECC
Confidence 999999999999999999999999998875 378999999999999899999999863
No 178
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.1e-36 Score=327.73 Aligned_cols=191 Identities=28% Similarity=0.449 Sum_probs=167.1
Q ss_pred EEEEeEEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCccccccEEEEec
Q 000711 445 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQ 520 (1338)
Q Consensus 445 i~~~~v~~~~~~~----~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q 520 (1338)
++++||++.|++. +++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +|+|+||
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------~i~~~~q 73 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------SIAYVSQ 73 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------EEEEEec
Confidence 4789999999764 3799999999999999999999999999999999999999999999987 6999999
Q ss_pred CCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCcc---ccCCCCCChhHHHHHHHHHHHccCC
Q 000711 521 RPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKE---INWGDELSLGEQQRLGMARLFYHKP 597 (1338)
Q Consensus 521 ~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~---~~~g~~LSgGqkQRlalARal~~~p 597 (1338)
+|.++++|++||+.++.. ..+++..++++.+++.+.++..|.+.. .....+||+|||||++||||++.+|
T Consensus 74 ~~~l~~~t~~enl~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 74 EPWIQNGTIRENILFGKP-------FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred CchhccCcHHHHhccCCC-------cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999998642 124456778888899888887764332 2346789999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHH-HH---ccCCeEEEEecChhhHhhcceEEEccC
Q 000711 598 KFAILDECTSAVTTDMEERFCAK-VR---AMGTSCITISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 598 ~illLDEpts~LD~~~~~~i~~~-l~---~~~~t~i~itH~~~~~~~~d~i~~l~~ 649 (1338)
++++|||||++||+++.+.+.+. ++ +.|+|+|++||+++.+..+|++++|++
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~ 202 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDN 202 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeC
Confidence 99999999999999999888774 43 247999999999999888999999976
No 179
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-36 Score=336.06 Aligned_cols=201 Identities=27% Similarity=0.432 Sum_probs=174.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 517 (1338)
.++++|+++.|++++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 2 ~l~~~~l~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 81 (229)
T cd03254 2 EIEFENVNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIGV 81 (229)
T ss_pred eEEEEEEEEecCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEEE
Confidence 58999999999755679999999999999999999999999999999999999999999999854 123567999
Q ss_pred EecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHc
Q 000711 518 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 518 v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~ 594 (1338)
+||+++++.+|++||+.++... ....++.++++.+++.++.+++|.+... ....+||||||||++|||||+
T Consensus 82 ~~q~~~~~~~tv~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~ 155 (229)
T cd03254 82 VLQDTFLFSGTIMENIRLGRPN------ATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAML 155 (229)
T ss_pred ecCCchhhhhHHHHHHhccCCC------CCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHh
Confidence 9999999989999999886432 2345677888889998888887633221 245789999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
.+|+++||||||++||+.+.+.+++.+++ .++|+|++||+++.+..||++++|+++
T Consensus 156 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g 213 (229)
T cd03254 156 RDPKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDG 213 (229)
T ss_pred cCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCC
Confidence 99999999999999999999999998865 379999999999998889999999863
No 180
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=349.72 Aligned_cols=197 Identities=19% Similarity=0.266 Sum_probs=167.2
Q ss_pred EEEEeEEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-----------
Q 000711 445 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------- 509 (1338)
Q Consensus 445 i~~~~v~~~~~~~----~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----------- 509 (1338)
|+++||++.|+++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 7899999999753 3699999999999999999999999999999999999999999999986431
Q ss_pred -------------------cccccEEEEecCC--CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCc-hHHhcC
Q 000711 510 -------------------DLNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRY 567 (1338)
Q Consensus 510 -------------------~~~~~i~~v~Q~~--~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~ 567 (1338)
.+++.|+||||+| .++..|++|||.|+...........++++.++++.++|. ++.++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~ 162 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQRS 162 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCC
Confidence 2346799999986 577789999999864321111112245678899999996 677776
Q ss_pred CCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcce
Q 000711 568 PPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDV 643 (1338)
Q Consensus 568 ~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~ 643 (1338)
| .+||||||||++|||||+.+|+++||||||++||+.+...+.+.+++ .|+|+|+|||+++.+ ..||+
T Consensus 163 ~--------~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adr 234 (305)
T PRK13651 163 P--------FELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKR 234 (305)
T ss_pred h--------hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCE
Confidence 6 68999999999999999999999999999999999999999887754 489999999999865 68999
Q ss_pred EEEccC
Q 000711 644 VLSLDG 649 (1338)
Q Consensus 644 i~~l~~ 649 (1338)
|++|++
T Consensus 235 v~vl~~ 240 (305)
T PRK13651 235 TIFFKD 240 (305)
T ss_pred EEEEEC
Confidence 999976
No 181
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-36 Score=340.00 Aligned_cols=197 Identities=23% Similarity=0.354 Sum_probs=167.3
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc---------cccccE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 515 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~~~i 515 (1338)
++++||++.|++++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 1 l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 80 (241)
T cd03256 1 IEVENLSKTYPNGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQI 80 (241)
T ss_pred CEEeeEEEecCCccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhcc
Confidence 46899999996546899999999999999999999999999999999999999999999998641 124579
Q ss_pred EEEecCCCCCC-CCHHHHhcCCCCCC--------cccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHH
Q 000711 516 FYVPQRPYTAV-GTLRDQLIYPLTSD--------QEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQR 586 (1338)
Q Consensus 516 ~~v~Q~~~l~~-~tl~eni~~~~~~~--------~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQR 586 (1338)
+|+||++.++. .|++||+.++.... .......++++.++++.+++.+..++.+ .+||||||||
T Consensus 81 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qr 152 (241)
T cd03256 81 GMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRA--------DQLSGGQQQR 152 (241)
T ss_pred EEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCc--------ccCCHHHHHH
Confidence 99999998766 69999998753210 0001122456778899999987777654 6899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 587 lalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
++||||++++|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 153 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~ 220 (241)
T cd03256 153 VAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKD 220 (241)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999988764 3899999999999887 8999999986
No 182
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=7.4e-37 Score=336.82 Aligned_cols=203 Identities=25% Similarity=0.321 Sum_probs=164.6
Q ss_pred eEEeeeEEeCCCc-cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-----CCccc
Q 000711 1100 ISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCG 1173 (1338)
Q Consensus 1100 I~f~nV~f~yp~~-~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~-----~lr~~ 1173 (1338)
|+++||++.|++. +++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++.... ..|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 6899999999754 57999999999999999999999999999999999999999999999999886542 13457
Q ss_pred EEEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcc
Q 000711 1174 IFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 1252 (1338)
Q Consensus 1174 i~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~ 1252 (1338)
++||||+|.+|. .|++||+.++... .+. ..+..++.+.++++.+++.+..++.
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~---------- 135 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRI----------IGV------PPRDANERVSAALEKVGLEGKAHAL---------- 135 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHh----------cCC------CHHHHHHHHHHHHHHcCChhhhhCC----------
Confidence 999999999987 5999999754110 000 0001123456677777775444332
Q ss_pred cCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCcc-cccceEEEecCC
Q 000711 1253 EDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIP-FHSLELRLIDGE 1328 (1338)
Q Consensus 1253 g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i~-~~d~~l~l~~g~ 1328 (1338)
..+||||||||++||||++++|++|||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+. ++|+++.|.+|+
T Consensus 136 ~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~ 215 (216)
T TIGR00960 136 PMQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGR 215 (216)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCc
Confidence 246999999999999999999999999999999999999888776643 4899999999998764 789999997663
No 183
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.2e-36 Score=335.95 Aligned_cols=199 Identities=28% Similarity=0.357 Sum_probs=169.2
Q ss_pred CcEEEEeEEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-c--------
Q 000711 443 NYIEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-D-------- 510 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~---~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-~-------- 510 (1338)
..++++|+++.|+++ .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 468999999999753 3699999999999999999999999999999999999999999999998641 1
Q ss_pred c-cccEEEEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHH
Q 000711 511 L-NKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1338)
Q Consensus 511 ~-~~~i~~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1338)
. ++.++|+||+|.++. .|+.||+.++............+++.++++.+++.+..++.+ ..||||||||++
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~Ge~qrl~ 156 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP--------AQLSGGEQQRVA 156 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh--------hhCCHHHHHHHH
Confidence 1 247999999998876 499999986431111001122456788999999998887766 689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHhhcceEEEccC
Q 000711 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 589 lARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~~~d~i~~l~~ 649 (1338)
|||||+.+|+++||||||++||+.+.+.+.+.+++ .|.|+|++||+++.+..+|+++++++
T Consensus 157 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~ 221 (228)
T PRK10584 157 LARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVN 221 (228)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999988753 38899999999998888999999976
No 184
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=347.96 Aligned_cols=199 Identities=23% Similarity=0.285 Sum_probs=168.0
Q ss_pred cEEEEeEEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----------
Q 000711 444 YIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------- 509 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~----~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------- 509 (1338)
+|+++||++.|+.+ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 37899999999743 3599999999999999999999999999999999999999999999998641
Q ss_pred cccccEEEEecCC--CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCc-hHHhcCCCCccccCCCCCChhHHHH
Q 000711 510 DLNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQR 586 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~--~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkQR 586 (1338)
.+++.++||+|+| .++..|+.||+.|+...........++++.++++.+++. ++.++.+ ..||||||||
T Consensus 81 ~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~--------~~LSgGqkqr 152 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSP--------FELSGGQMRR 152 (288)
T ss_pred HHHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCc--------ccCCHHHHHH
Confidence 2356799999998 788889999998864221110111234677889999995 4666655 6899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 587 lalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
++|||||+.+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+ ..||+|++|+++
T Consensus 153 vaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G 220 (288)
T PRK13643 153 VAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKG 220 (288)
T ss_pred HHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999888754 489999999999987 579999999873
No 185
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.6e-36 Score=335.52 Aligned_cols=208 Identities=26% Similarity=0.311 Sum_probs=177.8
Q ss_pred CceEEeeeEEeCCC-ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccE
Q 000711 1098 DSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGI 1174 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~-~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i 1174 (1338)
|.|+++|+++.|+. .+++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++... ...++++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 46899999999975 45799999999999999999999999999999999999999999999999988754 2345679
Q ss_pred EEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCc-cc
Q 000711 1175 FYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WE 1253 (1338)
Q Consensus 1175 ~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~-~g 1253 (1338)
+|+||+|.+|++|++|||.+.... ....+.++++.+++...+.+++.|+++..+ +.
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~-----------------------~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 137 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEY-----------------------SDEELWQALERVGLKEFVESLPGGLDTVVEEGG 137 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCC-----------------------CHHHHHHHHHHhCcHHHHHhcccccccccccCC
Confidence 999999999999999999642111 122344556667777777777889988763 67
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
.+||+|||||++||||++++|+++||||||++||+.+.+.+.+.+++ .+.|+|+++|+++.+..+|+++.|.+|+
T Consensus 138 ~~LS~G~~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~ 214 (221)
T cd03244 138 ENLSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGR 214 (221)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCe
Confidence 89999999999999999999999999999999999999988877754 4789999999998888899999997664
No 186
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-36 Score=333.05 Aligned_cols=197 Identities=25% Similarity=0.325 Sum_probs=167.0
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC--ccccccEEEEecCC
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG--SDLNKEIFYVPQRP 522 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~--~~~~~~i~~v~Q~~ 522 (1338)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+||++
T Consensus 1 l~~~~l~~~~~-~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q~~ 79 (210)
T cd03269 1 LEVENVTKRFG-RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPEER 79 (210)
T ss_pred CEEEEEEEEEC-CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEeccCC
Confidence 46899999986 4689999999999999999999999999999999999999999999999865 22356799999999
Q ss_pred CCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000711 523 YTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAI 601 (1338)
Q Consensus 523 ~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ill 601 (1338)
.++. .|++||+.++...........++++.++++.+++.+..++.+ .+||||||||++||||++.+|++++
T Consensus 80 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~~~p~~ll 151 (210)
T cd03269 80 GLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANKRV--------EELSKGNQQKVQFIAAVIHDPELLI 151 (210)
T ss_pred cCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhCcH--------hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8876 499999987432111001112456788899999988777655 6899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 602 LDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 602 LDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
|||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|++++|+++
T Consensus 152 lDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g 204 (210)
T cd03269 152 LDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKG 204 (210)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCC
Confidence 9999999999999999988764 3789999999999874 69999999863
No 187
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=8.4e-37 Score=353.97 Aligned_cols=203 Identities=21% Similarity=0.251 Sum_probs=167.0
Q ss_pred eEEeeeEEeCCC---ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-----CCc
Q 000711 1100 ISFSKLDIITPS---QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSG 1171 (1338)
Q Consensus 1100 I~f~nV~f~yp~---~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~-----~lr 1171 (1338)
|+|+||+++|++ ..++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.... ..|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999863 257999999999999999999999999999999999999999999999999997652 235
Q ss_pred ccEEEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC
Q 000711 1172 CGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1338)
Q Consensus 1172 ~~i~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 1250 (1338)
++|+||||++.+|. .|+++|+.+|... .+.. ....++.+.++++.++|.+..++.
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~----------~~~~------~~~~~~~v~e~l~~vgL~~~~~~~-------- 137 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLEL----------DNTP------KDEIKRKVTELLALVGLGDKHDSY-------- 137 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHcCCchhhhCC--------
Confidence 68999999999995 7999999875310 0000 000123456777888876544332
Q ss_pred cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEe
Q 000711 1251 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLI 1325 (1338)
Q Consensus 1251 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~ 1325 (1338)
..+||||||||++|||||+.+|++|+||||||+||+++.+.+.+++++ .|+|+|+|+|+++.+ +++|++++|.
T Consensus 138 --~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~ 215 (343)
T TIGR02314 138 --PSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVIS 215 (343)
T ss_pred --hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 357999999999999999999999999999999999999887776543 489999999999876 6799999997
Q ss_pred cCC
Q 000711 1326 DGE 1328 (1338)
Q Consensus 1326 ~g~ 1328 (1338)
+|+
T Consensus 216 ~G~ 218 (343)
T TIGR02314 216 NGE 218 (343)
T ss_pred CCE
Confidence 764
No 188
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2e-36 Score=353.53 Aligned_cols=198 Identities=26% Similarity=0.400 Sum_probs=170.6
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----cccccEEEEe
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVP 519 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~ 519 (1338)
.|+++|+++.|++ +++|+|+||+|++||+++|+||||||||||+|+|+|+.+|++|+|.++|.+. ..+++++|||
T Consensus 2 ~L~i~~l~~~~~~-~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v~ 80 (353)
T PRK10851 2 SIEIANIKKSFGR-TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVF 80 (353)
T ss_pred EEEEEEEEEEeCC-eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEEe
Confidence 3789999999964 6799999999999999999999999999999999999999999999999651 2246799999
Q ss_pred cCCCCCC-CCHHHHhcCCCCCC----cccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 520 QRPYTAV-GTLRDQLIYPLTSD----QEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 520 Q~~~l~~-~tl~eni~~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
|++.+++ .|++||+.|+.... .......++++.++++.+++.++.++.| .+||||||||++|||||+
T Consensus 81 Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~--------~~LSgGq~QRvalArAL~ 152 (353)
T PRK10851 81 QHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP--------AQLSGGQKQRVALARALA 152 (353)
T ss_pred cCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh--------hhCCHHHHHHHHHHHHHh
Confidence 9998876 59999999975321 0001112457788999999999888877 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
.+|+++|||||||+||+.+++.+.+.+++ .|+|+|+|||+++.+ ..+|+|++|+++
T Consensus 153 ~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G 213 (353)
T PRK10851 153 VEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQG 213 (353)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999998887754 389999999999975 579999999863
No 189
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.1e-36 Score=331.20 Aligned_cols=192 Identities=22% Similarity=0.271 Sum_probs=167.8
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----cccccEEEEec
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 520 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~Q 520 (1338)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+. ..++.++|+||
T Consensus 1 l~~~~l~~~~~-~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 79 (208)
T cd03268 1 LKTNDLTKTYG-KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALIE 79 (208)
T ss_pred CEEEEEEEEEC-CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEecC
Confidence 46899999985 46899999999999999999999999999999999999999999999998651 23567999999
Q ss_pred CCCCC-CCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000711 521 RPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1338)
Q Consensus 521 ~~~l~-~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1338)
++.++ ..|++||+.++.... ..+++++.++++.+++.+..++.+ ..||||||||++||||++.+|++
T Consensus 80 ~~~~~~~~tv~e~l~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~~~p~l 147 (208)
T cd03268 80 APGFYPNLTARENLRLLARLL----GIRKKRIDEVLDVVGLKDSAKKKV--------KGFSLGMKQRLGIALALLGNPDL 147 (208)
T ss_pred CCccCccCcHHHHHHHHHHhc----CCcHHHHHHHHHHcCCHHHHhhhH--------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 99876 579999998753211 124567888999999988877755 68999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 600 AILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 600 llLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
+||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~ 201 (208)
T cd03268 148 LILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINK 201 (208)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEEC
Confidence 999999999999999999988764 4899999999999875 6999999986
No 190
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-36 Score=336.04 Aligned_cols=197 Identities=23% Similarity=0.237 Sum_probs=166.8
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-----cccccEEEEe
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-----DLNKEIFYVP 519 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-----~~~~~i~~v~ 519 (1338)
|+++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++|+|
T Consensus 1 i~~~~~~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (220)
T cd03265 1 IEVENLVKKYG-DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVF 79 (220)
T ss_pred CEEEEEEEEEC-CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEec
Confidence 47899999985 46899999999999999999999999999999999999999999999998541 2346799999
Q ss_pred cCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000711 520 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1338)
Q Consensus 520 Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1338)
|++.++. .|++||+.++...........++++.++++.+++++..++.+ .+||||||||++||||++.+|+
T Consensus 80 q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qr~~la~al~~~p~ 151 (220)
T cd03265 80 QDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLV--------KTYSGGMRRRLEIARSLVHRPE 151 (220)
T ss_pred CCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 9998776 499999987432110001112456788999999998877765 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 599 FAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 599 illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .+|++++|+++
T Consensus 152 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G 208 (220)
T cd03265 152 VLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHG 208 (220)
T ss_pred EEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 9999999999999999999888754 3889999999999875 69999999863
No 191
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-36 Score=357.35 Aligned_cols=197 Identities=21% Similarity=0.339 Sum_probs=169.3
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----cccccEEEEe
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVP 519 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~ 519 (1338)
.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. ..++.++|||
T Consensus 3 ~l~i~~l~~~~~-~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v~ 81 (369)
T PRK11000 3 SVTLRNVTKAYG-DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMVF 81 (369)
T ss_pred EEEEEEEEEEeC-CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEEe
Confidence 489999999996 46799999999999999999999999999999999999999999999998641 1245799999
Q ss_pred cCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000711 520 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1338)
Q Consensus 520 Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1338)
|++.++. .|++||+.|+...........++++.++++.+++.++.++.+ .+||||||||++|||||+.+|+
T Consensus 82 Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~--------~~LSgGq~QRvaLAraL~~~P~ 153 (369)
T PRK11000 82 QSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP--------KALSGGQRQRVAIGRTLVAEPS 153 (369)
T ss_pred CCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 9998876 599999998753211111112356788999999998888876 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 599 FAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 599 illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
++|||||||+||+.+++.+.+.+++ .|+|+|+|||+++.+ ..||++++|++
T Consensus 154 lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~ 209 (369)
T PRK11000 154 VFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDA 209 (369)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999998887754 389999999999876 57999999986
No 192
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=346.15 Aligned_cols=200 Identities=22% Similarity=0.311 Sum_probs=170.7
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc--------ccccc
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLNKE 514 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~--------~~~~~ 514 (1338)
..|+++||++.|++++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.
T Consensus 4 ~~l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 4 YILKVEELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred ceEEEEeEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 3699999999997567899999999999999999999999999999999999999999999999642 23467
Q ss_pred EEEEecCC--CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000711 515 IFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1338)
Q Consensus 515 i~~v~Q~~--~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1338)
++|+||+| .++..|++||+.++............+++.++++.+++.++.++.+ .+||||||||++||||
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LS~G~~qrl~lara 155 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKDKPT--------HCLSFGQKKRVAIAGV 155 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhhCCc--------ccCCHHHHHHHHHHHH
Confidence 99999998 5678899999987532111001112345788899999988877755 6899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 593 l~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
|+.+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+. .||++++|+++
T Consensus 156 L~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G 218 (283)
T PRK13636 156 LVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEG 218 (283)
T ss_pred HHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999998887754 3899999999999886 79999999863
No 193
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-36 Score=333.32 Aligned_cols=195 Identities=25% Similarity=0.326 Sum_probs=166.1
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-----cccccEEEEe
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-----DLNKEIFYVP 519 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-----~~~~~i~~v~ 519 (1338)
|+++|+++.|++ +++++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++|+|
T Consensus 1 i~~~~~~~~~~~-~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 78 (211)
T cd03264 1 LQLENLTKRYGK-KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYLP 78 (211)
T ss_pred CEEEEEEEEECC-EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEec
Confidence 478999999854 58999999999999 9999999999999999999999999999999998651 2356799999
Q ss_pred cCCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000711 520 QRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1338)
Q Consensus 520 Q~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1338)
|+|.++.. |++||+.++............+++.++++.+++.+..++.+ .+||||||||++||||++++|+
T Consensus 79 q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~~~p~ 150 (211)
T cd03264 79 QEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKKKI--------GSLSGGMRRRVGIAQALVGDPS 150 (211)
T ss_pred CCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhCch--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 99998875 99999986421110000112356788999999988777655 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHcc--CCeEEEEecChhhHh-hcceEEEccC
Q 000711 599 FAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 599 illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
++||||||++||+.+.+.+.+.+++. +.|+|++||+++.+. .+|++++|++
T Consensus 151 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~ 204 (211)
T cd03264 151 ILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNK 204 (211)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999988753 689999999999885 7999999986
No 194
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-37 Score=319.68 Aligned_cols=198 Identities=24% Similarity=0.271 Sum_probs=168.5
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYV 1177 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~V 1177 (1338)
|+|+||++.|. .+.+++|+||+|++||.+.++|||||||||+++.+.|+++|++|+|.|||.||+++ ..+|++||||
T Consensus 2 I~~~nvsk~y~-~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGYv 80 (309)
T COG1125 2 IEFENVSKRYG-NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGYV 80 (309)
T ss_pred ceeeeeehhcC-CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhhh
Confidence 79999999985 67799999999999999999999999999999999999999999999999999997 4577889999
Q ss_pred cCCCCCCC-CCHHHHhcC-CCch--HHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchh--hhhhhcccCcccCc
Q 000711 1178 PQRPYTCL-GTLRDQIIY-PLSR--EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY--LLEREEVGWDANLN 1251 (1338)
Q Consensus 1178 pQdP~LF~-GTIReNL~~-p~~~--~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~--~i~~~~~Gldt~~~ 1251 (1338)
-|.--||+ -|+.+||.. |.-. +.+ ..+..+.++++.++|.. +.+|-
T Consensus 81 iQqigLFPh~Tv~eNIa~VP~L~~w~k~-------------------~i~~r~~ELl~lvgL~p~~~~~Ry--------- 132 (309)
T COG1125 81 IQQIGLFPHLTVAENIATVPKLLGWDKE-------------------RIKKRADELLDLVGLDPSEYADRY--------- 132 (309)
T ss_pred hhhcccCCCccHHHHHHhhhhhcCCCHH-------------------HHHHHHHHHHHHhCCCHHHHhhcC---------
Confidence 99999996 699999975 4210 111 11344567777777742 44443
Q ss_pred ccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHH----HhcCCeEEEeccCC-CCcccccceEEEec
Q 000711 1252 WEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLA----KDMGITFVTSSQRP-ALIPFHSLELRLID 1326 (1338)
Q Consensus 1252 ~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~----~~~~~TvI~IAHRl-~~i~~~d~~l~l~~ 1326 (1338)
...|||||+||+.+||||..+|+|+++|||-+|||+-+.+.+|+.+ ++.++|+|.|+|.. +-++..|++.++.+
T Consensus 133 -P~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~ 211 (309)
T COG1125 133 -PHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDA 211 (309)
T ss_pred -chhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecC
Confidence 3579999999999999999999999999999999999998888754 24699999999999 58999999999965
Q ss_pred C
Q 000711 1327 G 1327 (1338)
Q Consensus 1327 g 1327 (1338)
|
T Consensus 212 G 212 (309)
T COG1125 212 G 212 (309)
T ss_pred C
Confidence 4
No 195
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=5.4e-36 Score=331.04 Aligned_cols=201 Identities=30% Similarity=0.501 Sum_probs=173.8
Q ss_pred cEEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------cccccEE
Q 000711 444 YIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i~ 516 (1338)
.++++|+++.|+++ +++++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|.+. ..++.++
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (220)
T cd03245 2 RIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIG 81 (220)
T ss_pred eEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEE
Confidence 48899999999753 5799999999999999999999999999999999999999999999998641 2345799
Q ss_pred EEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHH
Q 000711 517 YVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLF 593 (1338)
Q Consensus 517 ~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal 593 (1338)
|+||+++++..|+.||+.++... ....++.++++.+++.+..++.|.+..+ ....+||||||||++||||+
T Consensus 82 ~~~q~~~~~~~tv~e~l~~~~~~------~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al 155 (220)
T cd03245 82 YVPQDVTLFYGTLRDNITLGAPL------ADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARAL 155 (220)
T ss_pred EeCCCCccccchHHHHhhcCCCC------CCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHH
Confidence 99999998888999999876421 2345677889999999988887643322 23568999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHcc--CCeEEEEecChhhHhhcceEEEccCC
Q 000711 594 YHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 594 ~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
+.+|+++||||||++||+.+...+++.+++. ++|+|++||+++.+..+|++++++++
T Consensus 156 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g 214 (220)
T cd03245 156 LNDPPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSG 214 (220)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCC
Confidence 9999999999999999999999999988753 47999999999988899999999863
No 196
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2e-36 Score=341.67 Aligned_cols=210 Identities=23% Similarity=0.254 Sum_probs=177.9
Q ss_pred CCCceEEeeeEEeCCCc-cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--CCcc
Q 000711 1096 YQDSISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGC 1172 (1338)
Q Consensus 1096 ~~g~I~f~nV~f~yp~~-~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~--~lr~ 1172 (1338)
..|.|+++||+++|++. +++|+|+||+|+|||.+||+|+||||||||+++|.|+++|++|+|.+||.++.... ..+.
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 36889999999999763 57999999999999999999999999999999999999999999999999887652 3456
Q ss_pred cEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC-c
Q 000711 1173 GIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-N 1251 (1338)
Q Consensus 1173 ~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~ 1251 (1338)
+++||||+|.+|++|+++|+.+.... .+..+.++++.+++...++..|.|+++.. .
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~-----------------------~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~ 152 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKC-----------------------TDDRLWEALEIAQLKNMVKSLPGGLDAVVTE 152 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCC-----------------------CHHHHHHHHHHhCcHHHHhhcccccCcEecc
Confidence 79999999999999999999632110 11223344455566666777777888876 3
Q ss_pred ccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1252 WEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1252 ~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
++.+||+|||||++||||++++|++|||||||++||+++++.+.+.+++ .++|+|+++|+++.+..+|+++.|.+|+
T Consensus 153 ~~~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~ 231 (257)
T cd03288 153 GGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGI 231 (257)
T ss_pred CCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCE
Confidence 6789999999999999999999999999999999999999888777654 4899999999999888899999997554
No 197
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-36 Score=355.51 Aligned_cols=198 Identities=23% Similarity=0.391 Sum_probs=170.7
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC----ccccccEEEE
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYV 518 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~----~~~~~~i~~v 518 (1338)
..++++|+++.|+ +.++|+|+||++++||+++|+||||||||||+|+|+|+.+|++|+|.++|.+ ...++.++||
T Consensus 18 ~~l~l~~v~~~~~-~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~v 96 (377)
T PRK11607 18 PLLEIRNLTKSFD-GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPINMM 96 (377)
T ss_pred ceEEEEeEEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 4699999999985 4679999999999999999999999999999999999999999999999864 1235679999
Q ss_pred ecCCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000711 519 PQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1338)
Q Consensus 519 ~Q~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1338)
||++.+|.. |+.||+.|+............+++.++++.+++.++.++.| .+||||||||++|||||+.+|
T Consensus 97 fQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~--------~~LSgGq~QRVaLARAL~~~P 168 (377)
T PRK11607 97 FQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKP--------HQLSGGQRQRVALARSLAKRP 168 (377)
T ss_pred eCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHHhcCC
Confidence 999988865 99999999754211111112456788999999999988887 689999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHH----ccCCeEEEEecChhhH-hhcceEEEccC
Q 000711 598 KFAILDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 598 ~illLDEpts~LD~~~~~~i~~~l~----~~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
++|+||||||+||...++.+.+.++ +.|.|+|+|||+++.+ ..+|++++|++
T Consensus 169 ~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~ 225 (377)
T PRK11607 169 KLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNR 225 (377)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeC
Confidence 9999999999999999988876543 3589999999999975 67999999986
No 198
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-36 Score=344.27 Aligned_cols=198 Identities=25% Similarity=0.327 Sum_probs=169.5
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-------cccccEEE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIFY 517 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~~ 517 (1338)
++++|+++.|++++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++|
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 81 (274)
T PRK13644 2 IRLENVSYSYPDGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVGI 81 (274)
T ss_pred EEEEEEEEEcCCCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheEE
Confidence 78999999997556799999999999999999999999999999999999999999999998641 23457999
Q ss_pred EecCCC--CCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000711 518 VPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1338)
Q Consensus 518 v~Q~~~--l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1338)
+||+|. ++..|+.||+.++...........++++.++++.+++++..++.+ ..||||||||++|||||++
T Consensus 82 v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrv~laral~~ 153 (274)
T PRK13644 82 VFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRSP--------KTLSGGQGQCVALAGILTM 153 (274)
T ss_pred EEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCc--------ccCCHHHHHHHHHHHHHHc
Confidence 999985 567899999987632110001112346778899999998888765 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 596 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 596 ~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
+|+++||||||++||+.+...+++.+++ .|+|+|++||+++.+..||++++++++
T Consensus 154 ~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G 211 (274)
T PRK13644 154 EPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRG 211 (274)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECC
Confidence 9999999999999999999999988754 489999999999999899999999863
No 199
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=344.36 Aligned_cols=199 Identities=27% Similarity=0.372 Sum_probs=171.4
Q ss_pred cEEEEeEEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------cccccEE
Q 000711 444 YIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~-~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i~ 516 (1338)
.++++||++.|++ .+++++|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.+. .+++.++
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 5899999999974 46799999999999999999999999999999999999999999999999651 2346799
Q ss_pred EEecCC--CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 517 YVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 517 ~v~Q~~--~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
|+||+| .++..|++|||.++...........++++.++++.++|+++.++.+ ..||||||||++|||||+
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LS~G~~qrv~laral~ 156 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP--------HRLSGGQKQRVAIAGVLA 156 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc--------ccCCHHHHHHHHHHHHHH
Confidence 999998 4667899999988632211101112356788999999999888877 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
.+|+++||||||++||+.+...+++.+++ .|+|+|++||+++.+..||++++++++
T Consensus 157 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G 216 (279)
T PRK13635 157 LQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKG 216 (279)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECC
Confidence 99999999999999999999999998864 289999999999998889999999863
No 200
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=347.51 Aligned_cols=197 Identities=23% Similarity=0.284 Sum_probs=166.3
Q ss_pred EEEEeEEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----------c
Q 000711 445 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------D 510 (1338)
Q Consensus 445 i~~~~v~~~~~~~----~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----------~ 510 (1338)
++++||++.|++. .++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.+. .
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 7899999999742 5799999999999999999999999999999999999999999999999641 1
Q ss_pred ccccEEEEecCC--CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCc-hHHhcCCCCccccCCCCCChhHHHHH
Q 000711 511 LNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQRL 587 (1338)
Q Consensus 511 ~~~~i~~v~Q~~--~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkQRl 587 (1338)
.++.++||||+| .++..|++||+.++............+++.++++.++|. ++.++.+ .+||||||||+
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~--------~~LSgGq~qrv 154 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSP--------FELSGGQMRRV 154 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCc--------ccCCHHHHHHH
Confidence 245799999998 577889999998863211100011124577889999996 5556655 68999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 588 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 588 alARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
+|||||+.+|+++||||||++||+.+...+.+.+++ .|.|+|++||+++.+ ..||+|++|++
T Consensus 155 ~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~ 221 (290)
T PRK13634 155 AIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHK 221 (290)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999888754 389999999999987 57999999986
No 201
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=2.8e-36 Score=316.72 Aligned_cols=166 Identities=53% Similarity=0.985 Sum_probs=151.7
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcC
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQ 1179 (1338)
|+++||+++|++.+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+++. ++++|+||
T Consensus 1 i~~~~~~~~~~~~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~---------~~i~~~~q 71 (166)
T cd03223 1 IELENLSLATPDGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG---------EDLLFLPQ 71 (166)
T ss_pred CEEEEEEEEcCCCCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC---------ceEEEECC
Confidence 578999999986677999999999999999999999999999999999999999999999874 47999999
Q ss_pred CCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCChh
Q 000711 1180 RPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLG 1259 (1338)
Q Consensus 1180 dP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSgG 1259 (1338)
+|.++++|++||+.++ +...||||
T Consensus 72 ~~~~~~~tv~~nl~~~--------------------------------------------------------~~~~LS~G 95 (166)
T cd03223 72 RPYLPLGTLREQLIYP--------------------------------------------------------WDDVLSGG 95 (166)
T ss_pred CCccccccHHHHhhcc--------------------------------------------------------CCCCCCHH
Confidence 9999999999998632 01248999
Q ss_pred HHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHhcCCeEEEeccCCCCcccccceEEEecCCCCe
Q 000711 1260 EQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNW 1331 (1338)
Q Consensus 1260 QrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~~~~TvI~IAHRl~~i~~~d~~l~l~~g~g~~ 1331 (1338)
||||++||||++++|+++||||||++||.++.+.+.+.+++.++|+|+|+|+++...++|+++.+ +.+|.|
T Consensus 96 ~~~rv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~tiiivsh~~~~~~~~d~i~~l-~~~~~~ 166 (166)
T cd03223 96 EQQRLAFARLLLHKPKFVFLDEATSALDEESEDRLYQLLKELGITVISVGHRPSLWKFHDRVLDL-DGEGGW 166 (166)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCccccCHHHHHHHHHHHHHhCCEEEEEeCChhHHhhCCEEEEE-cCCCCC
Confidence 99999999999999999999999999999999999888776689999999999988999999999 677877
No 202
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.9e-36 Score=327.92 Aligned_cols=195 Identities=25% Similarity=0.355 Sum_probs=163.3
Q ss_pred eEEeeeEEeCCCc----cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEE
Q 000711 1100 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIF 1175 (1338)
Q Consensus 1100 I~f~nV~f~yp~~----~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~ 1175 (1338)
|+++||++.|++. +++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+|| +|+
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-----------~i~ 69 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-----------SIA 69 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-----------EEE
Confidence 5799999999764 4799999999999999999999999999999999999999999999998 599
Q ss_pred EEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCc-ccC
Q 000711 1176 YVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WED 1254 (1338)
Q Consensus 1176 ~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~-~g~ 1254 (1338)
||||+|.+|++|++||+.++....+ +...++++.+++...+...|.|+++..+ ...
T Consensus 70 ~~~q~~~l~~~t~~enl~~~~~~~~-----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 126 (204)
T cd03250 70 YVSQEPWIQNGTIRENILFGKPFDE-----------------------ERYEKVIKACALEPDLEILPDGDLTEIGEKGI 126 (204)
T ss_pred EEecCchhccCcHHHHhccCCCcCH-----------------------HHHHHHHHHcCcHHHHHhccCcccceecCCCC
Confidence 9999999999999999987532111 1122334445555556666778887653 457
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHH-HHH---hcCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYR-LAK---DMGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~-~~~---~~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
.||+|||||++||||++.+|+++||||||++||.++.+.+.+ +++ ..++|+|+|+|+++.+..+|+++.|.+|.
T Consensus 127 ~lS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 127 NLSGGQKQRISLARAVYSDADIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 899999999999999999999999999999999999876654 333 23799999999999888899999997763
No 203
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2e-36 Score=348.70 Aligned_cols=199 Identities=24% Similarity=0.291 Sum_probs=169.2
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-----ccccccEEE
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFY 517 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~ 517 (1338)
..++++||++.|+ +..+|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+ ...++++||
T Consensus 6 ~~i~i~~l~k~~~-~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ig~ 84 (306)
T PRK13537 6 APIDFRNVEKRYG-DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRVGV 84 (306)
T ss_pred ceEEEEeEEEEEC-CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcEEE
Confidence 4699999999996 4689999999999999999999999999999999999999999999999975 124578999
Q ss_pred EecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccC
Q 000711 518 VPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 596 (1338)
Q Consensus 518 v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~ 596 (1338)
|||++.++. .|++||+.|.............+++.++++.+++.+..++.+ .+||||||||++|||||+++
T Consensus 85 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~aL~~~ 156 (306)
T PRK13537 85 VPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKADAKV--------GELSGGMKRRLTLARALVND 156 (306)
T ss_pred EeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHhcCch--------hhCCHHHHHHHHHHHHHhCC
Confidence 999998875 699999986322111000111345678899999988777654 68999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 597 PKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 597 p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .||+|++|+++
T Consensus 157 P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G 214 (306)
T PRK13537 157 PDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEG 214 (306)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999998765 4899999999999885 69999999873
No 204
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-36 Score=336.90 Aligned_cols=197 Identities=29% Similarity=0.394 Sum_probs=167.8
Q ss_pred EEEEeEEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc---------ccc
Q 000711 445 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLN 512 (1338)
Q Consensus 445 i~~~~v~~~~~~~---~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~ 512 (1338)
|+++|+++.|++. .++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 7899999999653 2899999999999999999999999999999999999999999999998651 124
Q ss_pred ccEEEEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHH
Q 000711 513 KEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 591 (1338)
Q Consensus 513 ~~i~~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalAR 591 (1338)
+.++|+||+|.++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~ 153 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYP--------AQLSGGQKQRVGIAR 153 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcCh--------hhCCHHHHHHHHHHH
Confidence 67999999999886 699999987532111001112456788999999988877765 689999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 592 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 592 al~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|++++|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~ 216 (233)
T cd03258 154 ALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEK 216 (233)
T ss_pred HHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999988764 3899999999999875 6999999976
No 205
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-36 Score=334.58 Aligned_cols=200 Identities=30% Similarity=0.458 Sum_probs=173.3
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYV 518 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v 518 (1338)
++++|+++.|++++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 80 (236)
T cd03253 1 IEFENVTFAYDPGRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGVV 80 (236)
T ss_pred CEEEEEEEEeCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEEE
Confidence 4689999999766789999999999999999999999999999999999999999999999864 1234579999
Q ss_pred ecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCcc---ccCCCCCChhHHHHHHHHHHHcc
Q 000711 519 PQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKE---INWGDELSLGEQQRLGMARLFYH 595 (1338)
Q Consensus 519 ~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~---~~~g~~LSgGqkQRlalARal~~ 595 (1338)
||+|+++++|++||+.++... ..+.++.+.++.+++.+.++.++.+.. ..+..+||||||||++|||||++
T Consensus 81 ~q~~~~~~~tv~~nl~~~~~~------~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~ 154 (236)
T cd03253 81 PQDTVLFNDTIGYNIRYGRPD------ATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILK 154 (236)
T ss_pred CCCChhhcchHHHHHhhcCCC------CCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 999999999999999886432 234556777888899888887764322 23567999999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHcc--CCeEEEEecChhhHhhcceEEEccCC
Q 000711 596 KPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 596 ~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
+|+++||||||++||+.+.+.+.+.+++. |+|+|++||+++.+..||++++|+++
T Consensus 155 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g 211 (236)
T cd03253 155 NPPILLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDG 211 (236)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECC
Confidence 99999999999999999999999888642 88999999999999889999999863
No 206
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=343.43 Aligned_cols=200 Identities=26% Similarity=0.377 Sum_probs=170.7
Q ss_pred CcEEEEeEEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------cccccE
Q 000711 443 NYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEI 515 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~-~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i 515 (1338)
..++++|+++.|++ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 6 ~~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 6 VMIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred eEEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 46999999999973 56899999999999999999999999999999999999999999999998651 245679
Q ss_pred EEEecCC--CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000711 516 FYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1338)
Q Consensus 516 ~~v~Q~~--~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1338)
+|+||+| .++..|++||+.++............+.+.++++.+++.++.++.+ .+||||||||++|||||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~laral 157 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEP--------QNLSGGQKQRVAIASVL 157 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCc--------ccCCHHHHHHHHHHHHH
Confidence 9999998 4567899999987532110000112235678899999998888866 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHc---c-CCeEEEEecChhhHhhcceEEEccCC
Q 000711 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 594 ~~~p~illLDEpts~LD~~~~~~i~~~l~~---~-~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
+.+|+++||||||++||+.+.+.+++.+++ . ++|+|++||+++.+..||++++|+++
T Consensus 158 ~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G 218 (271)
T PRK13632 158 ALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEG 218 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECC
Confidence 999999999999999999999999998865 2 58999999999988899999999863
No 207
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=346.24 Aligned_cols=198 Identities=20% Similarity=0.302 Sum_probs=167.3
Q ss_pred EEEEeEEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----------c
Q 000711 445 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------D 510 (1338)
Q Consensus 445 i~~~~v~~~~~~~----~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----------~ 510 (1338)
++++||++.|+++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 7899999999642 4699999999999999999999999999999999999999999999998641 2
Q ss_pred ccccEEEEecCC--CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCc-hHHhcCCCCccccCCCCCChhHHHHH
Q 000711 511 LNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQRL 587 (1338)
Q Consensus 511 ~~~~i~~v~Q~~--~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkQRl 587 (1338)
+++.|+||||+| .++..|+.||+.++...........++++.++++.+|+. +..++.+ .+||||||||+
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~--------~~LSgGq~qrv 154 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSP--------FQMSGGQMRKI 154 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCc--------ccCCHHHHHHH
Confidence 456899999997 577789999999863211100111234567889999996 5666655 68999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 588 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 588 alARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
+|||||+.+|+++||||||++||+.+...+.+.+++ .|+|+|+|||+++.+ ..+|++++|+++
T Consensus 155 ~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G 222 (286)
T PRK13646 155 AIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEG 222 (286)
T ss_pred HHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999888764 389999999999987 579999999863
No 208
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-36 Score=329.50 Aligned_cols=195 Identities=23% Similarity=0.323 Sum_probs=165.4
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----cccccEEEEec
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 520 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~Q 520 (1338)
|+++|+++.|++ +. .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+||
T Consensus 1 i~~~~l~~~~~~-~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 77 (211)
T cd03298 1 VRLDKIRFSYGE-QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLFQ 77 (211)
T ss_pred CEEEeEEEEeCC-Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEec
Confidence 468999999864 33 399999999999999999999999999999999999999999998641 12457999999
Q ss_pred CCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000711 521 RPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1338)
Q Consensus 521 ~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1338)
+|.++.+ |++||+.++...........++++.++++.+++.+..++.+ .+||||||||++||||++.+|++
T Consensus 78 ~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~ia~al~~~p~l 149 (211)
T cd03298 78 ENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP--------GELSGGERQRVALARVLVRDKPV 149 (211)
T ss_pred ccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc--------ccCCHHHHHHHHHHHHHhcCCCE
Confidence 9998875 99999987643110011123457889999999998888766 68999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 600 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 600 llLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
+||||||++||+.+++.+.+.+++ .++|+|++||+++.+. .+|++++|+++
T Consensus 150 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G 205 (211)
T cd03298 150 LLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNG 205 (211)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECC
Confidence 999999999999999999988764 3899999999999875 69999999863
No 209
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.3e-36 Score=337.83 Aligned_cols=207 Identities=19% Similarity=0.262 Sum_probs=169.4
Q ss_pred eEEeeeEEeCCC-ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--CCcccEEE
Q 000711 1100 ISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFY 1176 (1338)
Q Consensus 1100 I~f~nV~f~yp~-~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~--~lr~~i~~ 1176 (1338)
|+++||++.|++ .+++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.++|.++.... ..+++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 579999999975 467999999999999999999999999999999999999999999999999886542 33557999
Q ss_pred EcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCc-ccCC
Q 000711 1177 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WEDI 1255 (1338)
Q Consensus 1177 VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~-~g~~ 1255 (1338)
+||+|.+|+.|+++||.++..... ...+.+.++..++.+.++..|.|+++..+ ...+
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~----------------------~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 138 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMS----------------------MERVIEAAKLAGAHDFISELPEGYDTIVGEQGAG 138 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCC----------------------HHHHHHHHHHcCcHHHHHhCcccccchhhcCCCc
Confidence 999999999999999976432100 01112222334444455555566666542 4578
Q ss_pred CChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1256 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1256 LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
||||||||++||||++++|+++||||||++||..+.+.+.+.+++ .|+|+|+++|+++.+..+|+++.|.+|+
T Consensus 139 LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~ 213 (237)
T cd03252 139 LSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGR 213 (237)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999988877654 4899999999999888899999997664
No 210
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.4e-36 Score=353.83 Aligned_cols=186 Identities=28% Similarity=0.329 Sum_probs=161.1
Q ss_pred CCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------cc----cccEEEEecCCCCC
Q 000711 456 TGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DL----NKEIFYVPQRPYTA 525 (1338)
Q Consensus 456 ~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~----~~~i~~v~Q~~~l~ 525 (1338)
+++.+++|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. ++ +++++||||++++|
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~ 83 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALF 83 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCC
Confidence 356799999999999999999999999999999999999999999999999651 12 56899999999998
Q ss_pred C-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000711 526 V-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDE 604 (1338)
Q Consensus 526 ~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDE 604 (1338)
+ .|++|||.++............+++.++++.++|+++.++.| .+||||||||++|||||+++|+++||||
T Consensus 84 ~~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p--------~~LSGGq~QRV~lARAL~~~p~iLLlDE 155 (363)
T TIGR01186 84 PHMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYP--------DELSGGMQQRVGLARALAAEPDILLMDE 155 (363)
T ss_pred CCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCCh--------hhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 7 599999998643211111123457789999999999988887 6899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 605 CTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 605 pts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
|||+||+.+.+.+++.+.+ .|+|+|+|||+++.+ +.+|+|++|++
T Consensus 156 P~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~ 205 (363)
T TIGR01186 156 AFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKA 205 (363)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 9999999999999988753 389999999999875 67999999986
No 211
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.9e-36 Score=336.53 Aligned_cols=196 Identities=26% Similarity=0.362 Sum_probs=166.0
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-----cccccEEEEe
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-----DLNKEIFYVP 519 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-----~~~~~i~~v~ 519 (1338)
++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ...+.++|+|
T Consensus 2 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~~~ 80 (236)
T TIGR03864 2 LEVAGLSFAYG-ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGVVF 80 (236)
T ss_pred EEEEeeEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEEeC
Confidence 68999999986 46899999999999999999999999999999999999999999999998641 1235799999
Q ss_pred cCCCC-CCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000711 520 QRPYT-AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1338)
Q Consensus 520 Q~~~l-~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1338)
|++.+ +..|++||+.++............+++.++++.+++.+..++.+ .+||||||||++||||++++|+
T Consensus 81 q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrl~laral~~~p~ 152 (236)
T TIGR03864 81 QQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAERADDKV--------RELNGGHRRRVEIARALLHRPA 152 (236)
T ss_pred CCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhcCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 99977 56799999987532111000112345778899999987766654 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHhhcceEEEccC
Q 000711 599 FAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 599 illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~~~d~i~~l~~ 649 (1338)
++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+..+|++++|++
T Consensus 153 llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~ 207 (236)
T TIGR03864 153 LLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHR 207 (236)
T ss_pred EEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeC
Confidence 9999999999999999999988754 37999999999998888999999986
No 212
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2.8e-36 Score=331.68 Aligned_cols=196 Identities=27% Similarity=0.358 Sum_probs=167.1
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc--------cccccEE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLNKEIF 516 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~--------~~~~~i~ 516 (1338)
++++||++.|++ +++++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++
T Consensus 1 l~~~~l~~~~~~-~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 79 (213)
T cd03262 1 IEIKNLHKSFGD-FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKVG 79 (213)
T ss_pred CEEEEEEEEECC-eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcce
Confidence 468999999964 6899999999999999999999999999999999999999999999998641 1346799
Q ss_pred EEecCCCCCC-CCHHHHhcCCCCC-CcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 517 YVPQRPYTAV-GTLRDQLIYPLTS-DQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 517 ~v~Q~~~l~~-~tl~eni~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
|+||+|.++. .|++||+.++... ........++++.++++.+++++..++.+ .+||||||||++||||++
T Consensus 80 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~ 151 (213)
T cd03262 80 MVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAYP--------AQLSGGQQQRVAIARALA 151 (213)
T ss_pred EEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhCc--------cccCHHHHHHHHHHHHHh
Confidence 9999998876 6999999875321 00001112346778899999988877766 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
++|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 152 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~ 210 (213)
T cd03262 152 MNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDD 210 (213)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 99999999999999999999999988864 4899999999999885 6999999976
No 213
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=4.2e-36 Score=353.89 Aligned_cols=198 Identities=23% Similarity=0.321 Sum_probs=171.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 517 (1338)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+|+|+|+++|++|+|.++|.+ .+++++++|
T Consensus 3 ~L~~~nls~~y~-~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~ 81 (402)
T PRK09536 3 MIDVSDLSVEFG-DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVAS 81 (402)
T ss_pred eEEEeeEEEEEC-CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEE
Confidence 589999999996 4789999999999999999999999999999999999999999999999964 234578999
Q ss_pred EecCCCC-CCCCHHHHhcCCCCCCc-cc---CCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000711 518 VPQRPYT-AVGTLRDQLIYPLTSDQ-EV---EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1338)
Q Consensus 518 v~Q~~~l-~~~tl~eni~~~~~~~~-~~---~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1338)
|+|++.+ +..|++||+.++..... .. ...+.+++.++++.+++.++.++.+ .+||||||||++||||
T Consensus 82 v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~--------~~LSgGerQRv~IArA 153 (402)
T PRK09536 82 VPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV--------TSLSGGERQRVLLARA 153 (402)
T ss_pred EccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHH
Confidence 9999987 57799999988643110 00 1123457889999999998888765 6899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 593 l~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
|+++|+++||||||++||+.++..+++.+++ .|+|+|++||+++.+ +.||++++|+++
T Consensus 154 L~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G 215 (402)
T PRK09536 154 LAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADG 215 (402)
T ss_pred HHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999998888764 488999999999998 579999999863
No 214
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.3e-36 Score=337.71 Aligned_cols=196 Identities=28% Similarity=0.407 Sum_probs=165.7
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------c-ccccEEE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIFY 517 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~-~~~~i~~ 517 (1338)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .+..++|
T Consensus 1 l~~~~l~~~~~-~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (236)
T cd03219 1 LEVRGLTKRFG-GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGR 79 (236)
T ss_pred CeeeeeEEEEC-CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEE
Confidence 46899999996 46799999999999999999999999999999999999999999999998641 1 1356999
Q ss_pred EecCCCCCCC-CHHHHhcCCCCCCccc----------CCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHH
Q 000711 518 VPQRPYTAVG-TLRDQLIYPLTSDQEV----------EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQR 586 (1338)
Q Consensus 518 v~Q~~~l~~~-tl~eni~~~~~~~~~~----------~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQR 586 (1338)
+||++.++.+ |++||+.++....... .....+++.++++.+++.+..++.+ .+||||||||
T Consensus 80 v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qr 151 (236)
T cd03219 80 TFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA--------GELSYGQQRR 151 (236)
T ss_pred EecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh--------hhCCHHHHHH
Confidence 9999988775 9999998754211000 0112345778899999987776654 6899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 587 lalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
++||||++.+|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 152 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~ 218 (236)
T cd03219 152 LEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQ 218 (236)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999999998764 4899999999999875 6999999986
No 215
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5.2e-36 Score=331.64 Aligned_cols=198 Identities=24% Similarity=0.380 Sum_probs=169.0
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------cccccEE
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEIF 516 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i~ 516 (1338)
..|+++||++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+. ..++.++
T Consensus 6 ~~i~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 6 PLLQLQNVGYLAG-DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred ceEEEeccEEeeC-CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 4699999999986 46899999999999999999999999999999999999999999999998541 2346799
Q ss_pred EEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCc-hHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000711 517 YVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1338)
Q Consensus 517 ~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1338)
|+||+++++..|++||+.++..... ....++++.++++.+++. ...++.+ .+||||||||++|||||++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRN--QQPDPAIFLDDLERFALPDTILTKNI--------AELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcC--CChHHHHHHHHHHHcCCChHHhcCCc--------ccCCHHHHHHHHHHHHHhc
Confidence 9999999998899999987432111 111245677899999995 4555544 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHhhcceEEEccCCC
Q 000711 596 KPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDGEG 651 (1338)
Q Consensus 596 ~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~~~d~i~~l~~~g 651 (1338)
+|+++||||||++||+.+.+.+.+.+++ .|.|+|++||+++.+..||++++|++++
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~ 214 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHA 214 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEeccc
Confidence 9999999999999999999999887764 3889999999999988999999997544
No 216
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.4e-36 Score=334.25 Aligned_cols=199 Identities=24% Similarity=0.290 Sum_probs=166.8
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCC-----CCCccEEEeCCCCc--------cc
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW-----PLVSGHIAKPGVGS--------DL 511 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~-----~~~~G~i~~~~~~~--------~~ 511 (1338)
|+++||++.|++ +++|+|+||++++||+++|+||||||||||+++|+|++ +|++|+|.++|.+. .+
T Consensus 1 i~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (227)
T cd03260 1 IELRDLNVYYGD-KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLEL 79 (227)
T ss_pred CEEEEEEEEcCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHH
Confidence 478999999964 68999999999999999999999999999999999999 99999999998641 13
Q ss_pred cccEEEEecCCCCCCCCHHHHhcCCCCCCcccC-CCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000711 512 NKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVE-PLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1338)
Q Consensus 512 ~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1338)
+++++|+||++.++..|++||+.++........ ...++++.++++.+++.+..++.+. ..+||||||||++||
T Consensus 80 ~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~------~~~LSgG~~qrv~la 153 (227)
T cd03260 80 RRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH------ALGLSGGQQQRLCLA 153 (227)
T ss_pred HhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC------cccCCHHHHHHHHHH
Confidence 457999999998888899999987642211000 0124567889999999877665420 268999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHcc--CCeEEEEecChhhHh-hcceEEEccCC
Q 000711 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 591 Ral~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
|||+++|+++||||||++||+.+++.+.+.+++. .+|+|++||+++.+. .||++++|+++
T Consensus 154 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G 216 (227)
T cd03260 154 RALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNG 216 (227)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999988652 379999999999765 79999999863
No 217
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-36 Score=335.78 Aligned_cols=210 Identities=23% Similarity=0.318 Sum_probs=175.5
Q ss_pred CceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEE
Q 000711 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIF 1175 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~ 1175 (1338)
|.|+++|+++.|++.+++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ...+.+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (229)
T cd03254 1 GEIEFENVNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIG 80 (229)
T ss_pred CeEEEEEEEEecCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEE
Confidence 4689999999997656799999999999999999999999999999999999999999999999988754 23456799
Q ss_pred EEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCc-ccC
Q 000711 1176 YVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WED 1254 (1338)
Q Consensus 1176 ~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~-~g~ 1254 (1338)
|+||+|.+|.+|+++|+.++.... .+..+.+.++.+++...+++.|.|+++..+ ...
T Consensus 81 ~~~q~~~~~~~tv~~~~~~~~~~~----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 138 (229)
T cd03254 81 VVLQDTFLFSGTIMENIRLGRPNA----------------------TDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGG 138 (229)
T ss_pred EecCCchhhhhHHHHHHhccCCCC----------------------CHHHHHHHHHHhChHHHHHhCcccccCHhhcCCC
Confidence 999999999999999997642110 012233344555666666666777777653 457
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCCC
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGEG 1329 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~g 1329 (1338)
.||+|||||++||||++++|++|||||||++||.++.+.+.+.++. .++|+|+|+|.++.+..+|+++.|.+|+-
T Consensus 139 ~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~ 215 (229)
T cd03254 139 NLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKI 215 (229)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeE
Confidence 8999999999999999999999999999999999999888776644 48999999999988888999999977763
No 218
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-36 Score=334.25 Aligned_cols=194 Identities=29% Similarity=0.365 Sum_probs=168.3
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 517 (1338)
.++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~ 81 (241)
T PRK14250 3 EIEFKEVSYSSF-GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGM 81 (241)
T ss_pred eEEEEeEEEEeC-CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEE
Confidence 489999999986 4679999999999999999999999999999999999999999999999864 123567999
Q ss_pred EecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCc-hHHhcCCCCccccCCCCCChhHHHHHHHHHHHccC
Q 000711 518 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 596 (1338)
Q Consensus 518 v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~ 596 (1338)
+||+|.++..|++||+.++.... ....+++.++++.+++. ++.++.+ .+||||||||++||||++++
T Consensus 82 ~~q~~~~~~~tv~e~l~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 82 VFQQPHLFEGTVKDNIEYGPMLK----GEKNVDVEYYLSIVGLNKEYATRDV--------KNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EecCchhchhhHHHHHhcchhhc----CcHHHHHHHHHHHcCCCHHHhhCCc--------ccCCHHHHHHHHHHHHHhcC
Confidence 99999998899999998754221 11245678889999996 4566644 68999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 597 PKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 597 p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .||++++|+++
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 999999999999999999999888764 3899999999999875 69999999863
No 219
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.3e-36 Score=344.51 Aligned_cols=199 Identities=28% Similarity=0.371 Sum_probs=169.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-----ccccccEEEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYV 518 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v 518 (1338)
.++++||++.|..++.+|+|+||+|++||+++++||||||||||+|+|+|+..|++|+|.++|.+ .+.++++||+
T Consensus 4 ~i~~~~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~igy~ 83 (293)
T COG1131 4 VIEVRNLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIGYV 83 (293)
T ss_pred eeeecceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheEEE
Confidence 47889999999646899999999999999999999999999999999999999999999999965 2356789999
Q ss_pred ecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000711 519 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1338)
Q Consensus 519 ~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1338)
||+|.++. .|++||+.|............++++.++++.++|.+..++.. ..||+|||||++||+||+++|
T Consensus 84 ~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~~~~~--------~~lS~G~kqrl~ia~aL~~~P 155 (293)
T COG1131 84 PQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKANKKV--------RTLSGGMKQRLSIALALLHDP 155 (293)
T ss_pred ccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhhCcch--------hhcCHHHHHHHHHHHHHhcCC
Confidence 99998665 599999987432211111124568899999999998443333 689999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHc---cC-CeEEEEecChhhHhh-cceEEEccCC
Q 000711 598 KFAILDECTSAVTTDMEERFCAKVRA---MG-TSCITISHRPALVAF-HDVVLSLDGE 650 (1338)
Q Consensus 598 ~illLDEpts~LD~~~~~~i~~~l~~---~~-~t~i~itH~~~~~~~-~d~i~~l~~~ 650 (1338)
+++||||||++||+.+...+.+.+++ .| +||+++||.++.+.. ||+|++++++
T Consensus 156 ~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 156 ELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred CEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 99999999999999999999998865 35 899999999998865 9999999873
No 220
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-36 Score=348.21 Aligned_cols=202 Identities=18% Similarity=0.208 Sum_probs=163.8
Q ss_pred CceEEeeeEEeCCCc----cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc------
Q 000711 1098 DSISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------ 1167 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~----~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~------ 1167 (1338)
..|+++||+|.|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 359999999999742 4699999999999999999999999999999999999999999999999887542
Q ss_pred ------------cCCcccEEEEcCCC--CCCCCCHHHHhcCCCc---hHHHHHHHHhhhcCCccccccccCchHHHHHHH
Q 000711 1168 ------------AGSGCGIFYVPQRP--YTCLGTLRDQIIYPLS---REEAELRALKLHGKGEKLVDTTNILDSYLKTIL 1230 (1338)
Q Consensus 1168 ------------~~lr~~i~~VpQdP--~LF~GTIReNL~~p~~---~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l 1230 (1338)
..+|++|+||||+| .+|++|+++||.++.. .+.+ + ....+.+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~--~-----------------~~~~~~~~l 160 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKS--E-----------------AKKLAKFYL 160 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHH--H-----------------HHHHHHHHH
Confidence 13456799999999 7999999999976421 0000 0 012234455
Q ss_pred hhCCch-hhhhhhcccCcccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEE
Q 000711 1231 EGVRLS-YLLEREEVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFV 1306 (1338)
Q Consensus 1231 ~~~~L~-~~i~~~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI 1306 (1338)
+.++|. ...+ ....+||||||||++|||||+++|++||||||||+||+.+++.+.+.+++ .|+|+|
T Consensus 161 ~~~gL~~~~~~----------~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~Tii 230 (320)
T PRK13631 161 NKMGLDDSYLE----------RSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVF 230 (320)
T ss_pred HHcCCChhHhc----------CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 666663 2221 12467999999999999999999999999999999999999988776643 489999
Q ss_pred EeccCCCCc-ccccceEEEecCC
Q 000711 1307 TSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1307 ~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
+|+|+++.+ +++|++++|.+|+
T Consensus 231 ivtHd~~~~~~~adri~vl~~G~ 253 (320)
T PRK13631 231 VITHTMEHVLEVADEVIVMDKGK 253 (320)
T ss_pred EEecCHHHHHHhCCEEEEEECCE
Confidence 999999865 7899999997765
No 221
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.7e-36 Score=332.98 Aligned_cols=203 Identities=25% Similarity=0.308 Sum_probs=164.5
Q ss_pred eEEeeeEEeCCCc---cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc------CC
Q 000711 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA------GS 1170 (1338)
Q Consensus 1100 I~f~nV~f~yp~~---~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~------~l 1170 (1338)
|+++||++.|++. +++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.... ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 5789999999753 67999999999999999999999999999999999999999999999999887642 13
Q ss_pred cccEEEEcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCccc
Q 000711 1171 GCGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 1249 (1338)
Q Consensus 1171 r~~i~~VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 1249 (1338)
+.+++||||+|.+|.+ |++||+.++... .+.. ....++.+.++++.+++....++.
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~~~~~------- 137 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLL----------AGVP------KKERRERAEELLERVGLGDRLNHY------- 137 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhh----------cCCC------HHHHHHHHHHHHHHcCCchhhhcC-------
Confidence 4579999999999986 999999753210 0000 000123455667777764433222
Q ss_pred CcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCcccccceEEEe
Q 000711 1250 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLI 1325 (1338)
Q Consensus 1250 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i~~~d~~l~l~ 1325 (1338)
..+||||||||++||||++++|++|||||||++||+++.+.+.+.+++ .++|+|+|+|+++.+.++|+++.|.
T Consensus 138 ---~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~ 214 (218)
T cd03255 138 ---PSELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELR 214 (218)
T ss_pred ---hhhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEee
Confidence 347999999999999999999999999999999999999888776543 3899999999998888999999997
Q ss_pred cCC
Q 000711 1326 DGE 1328 (1338)
Q Consensus 1326 ~g~ 1328 (1338)
+|+
T Consensus 215 ~G~ 217 (218)
T cd03255 215 DGK 217 (218)
T ss_pred CCc
Confidence 763
No 222
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=3.3e-36 Score=332.77 Aligned_cols=209 Identities=26% Similarity=0.361 Sum_probs=176.0
Q ss_pred CceEEeeeEEeCCCc-cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--CCcccE
Q 000711 1098 DSISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGI 1174 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~-~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~--~lr~~i 1174 (1338)
|.|+++|+++.|++. .++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.++|.++.... ..+.++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 468999999999753 67999999999999999999999999999999999999999999999999886542 234579
Q ss_pred EEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCc-cc
Q 000711 1175 FYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WE 1253 (1338)
Q Consensus 1175 ~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~-~g 1253 (1338)
+|+||+|.+|..|++||+.++.... ....+.++++.+++.+..+..|.|+++... ..
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~----------------------~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 138 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLA----------------------DDERILRAAELAGVTDFVNKHPNGLDLQIGERG 138 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCC----------------------CHHHHHHHHHHcCcHHHHHhccccccceecCCC
Confidence 9999999999999999997542110 012234455666777777777888888763 45
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
.+||||||||++||||++.+|++|||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+.++|+++.+.+|+
T Consensus 139 ~~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~ 215 (220)
T cd03245 139 RGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGR 215 (220)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCe
Confidence 78999999999999999999999999999999999999988887754 2589999999999889999999997653
No 223
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-36 Score=336.95 Aligned_cols=198 Identities=27% Similarity=0.378 Sum_probs=166.3
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYV 518 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v 518 (1338)
++++||++.|++.+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (242)
T cd03295 1 IEFENVTKRYGGGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYV 80 (242)
T ss_pred CEEEEEEEEeCCcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEE
Confidence 4689999998643679999999999999999999999999999999999999999999999864 1234679999
Q ss_pred ecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCch--HHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000711 519 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY--LLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1338)
Q Consensus 519 ~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1338)
||+|.++. .|++||+.++............+++.++++.+++.+ ..++.+ .+||||||||++||||+++
T Consensus 81 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~--------~~LS~G~~qrv~laral~~ 152 (242)
T cd03295 81 IQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYP--------HELSGGQQQRVGVARALAA 152 (242)
T ss_pred ccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcCh--------hhCCHHHHHHHHHHHHHhc
Confidence 99998875 699999987532111001112456788899999985 666544 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 596 KPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 596 ~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..+|++++|+++
T Consensus 153 ~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G 212 (242)
T cd03295 153 DPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNG 212 (242)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999888764 289999999999965 579999999863
No 224
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-36 Score=341.94 Aligned_cols=199 Identities=25% Similarity=0.329 Sum_probs=169.6
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------cccccEEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEIFY 517 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i~~ 517 (1338)
.++++||++.|++++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++|
T Consensus 3 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (277)
T PRK13652 3 LIETRDLCYSYSGSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGL 82 (277)
T ss_pred eEEEEEEEEEeCCCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEE
Confidence 488999999997556799999999999999999999999999999999999999999999998641 23457999
Q ss_pred EecCC--CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000711 518 VPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1338)
Q Consensus 518 v~Q~~--~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1338)
+||+| .++..|++||+.++...........++++.++++.+++.+..++.+ ..||||||||++|||||+.
T Consensus 83 v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~Gq~qrl~laraL~~ 154 (277)
T PRK13652 83 VFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP--------HHLSGGEKKRVAIAGVIAM 154 (277)
T ss_pred EecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc--------ccCCHHHHHHHHHHHHHHc
Confidence 99998 3677899999987532111001112345788999999998888876 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 596 KPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 596 ~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ +.||++++|+++
T Consensus 155 ~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 155 EPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999888754 389999999999987 589999999863
No 225
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-36 Score=330.85 Aligned_cols=202 Identities=25% Similarity=0.313 Sum_probs=163.2
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcC
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQ 1179 (1338)
|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++......+.+++||||
T Consensus 1 l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q 79 (213)
T cd03259 1 LELKGLSKTYGS-VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQ 79 (213)
T ss_pred CeeeeeEEEeCC-eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEcC
Confidence 578999999965 5799999999999999999999999999999999999999999999999988765444567999999
Q ss_pred CCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCCh
Q 000711 1180 RPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1338)
Q Consensus 1180 dP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 1258 (1338)
+|.+|. .|+++|+.++.... +. .....++.+.++++.+++....++. ..+|||
T Consensus 80 ~~~~~~~~tv~~~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LSg 133 (213)
T cd03259 80 DYALFPHLTVAENIAFGLKLR----------GV------PKAEIRARVRELLELVGLEGLLNRY----------PHELSG 133 (213)
T ss_pred chhhccCCcHHHHHHhHHHHc----------CC------CHHHHHHHHHHHHHHcCChhhhhcC----------hhhCCH
Confidence 999886 69999996531100 00 0000123355667777765443332 246999
Q ss_pred hHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCC-cccccceEEEecCC
Q 000711 1259 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPAL-IPFHSLELRLIDGE 1328 (1338)
Q Consensus 1259 GQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~-i~~~d~~l~l~~g~ 1328 (1338)
|||||++||||++++|+++||||||++||.++.+.+.+.+++ .|+|||+|+|+++. .+++|+++.|.+|+
T Consensus 134 G~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~ 208 (213)
T cd03259 134 GQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGR 208 (213)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999888776643 38999999999975 57899999997663
No 226
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=7.2e-36 Score=332.18 Aligned_cols=197 Identities=31% Similarity=0.425 Sum_probs=161.8
Q ss_pred EEEEeEEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc---------ccc
Q 000711 445 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLN 512 (1338)
Q Consensus 445 i~~~~v~~~~~~~---~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~ 512 (1338)
++++||++.|++. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..+
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 6899999999654 2799999999999999999999999999999999999999999999998641 234
Q ss_pred ccEEEEecCC--CCC-CCCHHHHhcCCCCCCcccC-CCCHHH-HHHHHHHcCCc-hHHhcCCCCccccCCCCCChhHHHH
Q 000711 513 KEIFYVPQRP--YTA-VGTLRDQLIYPLTSDQEVE-PLTHGG-MVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQR 586 (1338)
Q Consensus 513 ~~i~~v~Q~~--~l~-~~tl~eni~~~~~~~~~~~-~~~~~~-~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkQR 586 (1338)
+.++|+||+| .++ ..|++||+.++........ ....++ ..++++.+++. +..++.+ .+||||||||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LS~G~~qr 153 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYP--------HELSGGQRQR 153 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCc--------hhcCHHHHHH
Confidence 6799999999 344 5799999976421110000 001112 24678888884 5666654 6899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---c-CCeEEEEecChhhHh-hcceEEEccC
Q 000711 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 587 lalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~-~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
++|||||+.+|+++||||||++||+.+++.+++.+++ . |+|+|++||+++.+. .+|++++|++
T Consensus 154 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 221 (228)
T cd03257 154 VAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYA 221 (228)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeC
Confidence 9999999999999999999999999999999998864 2 899999999999886 7999999986
No 227
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-36 Score=313.30 Aligned_cols=211 Identities=21% Similarity=0.259 Sum_probs=167.3
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc-----cCCccc
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-----AGSGCG 1173 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~-----~~lr~~ 1173 (1338)
.|+++||+..||++..+|+||||+|++||.|+|+||||||||||++.|.|++||++|+|.++|.++... ...|.+
T Consensus 3 ~i~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~~ 82 (258)
T COG3638 3 MIEVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRRD 82 (258)
T ss_pred eEEEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHHh
Confidence 589999999999999999999999999999999999999999999999999999999999999999876 234668
Q ss_pred EEEEcCCCCCCC-CCHHHHhcCCC-chHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCc
Q 000711 1174 IFYVPQRPYTCL-GTLRDQIIYPL-SREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN 1251 (1338)
Q Consensus 1174 i~~VpQdP~LF~-GTIReNL~~p~-~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~ 1251 (1338)
|++|.|.|-|-+ -|+-+|+..+. ++.. .++- ..+. .++.......++|+.+++.+..-.
T Consensus 83 iGmIfQ~~nLv~r~sv~~NVl~grl~~~s-~~~s--lfgl------fsk~dk~~Al~aLervgi~~~A~q---------- 143 (258)
T COG3638 83 IGMIFQQFNLVPRLSVLENVLLGRLGYTS-TWRS--LFGL------FSKEDKAQALDALERVGILDKAYQ---------- 143 (258)
T ss_pred ceeEeccCCcccccHHHHHHHhhhcccch-HHHH--HhCC------CCHHHHHHHHHHHHHcCcHHHHHH----------
Confidence 999999999875 58999986432 1110 0100 0000 001112234456777777443211
Q ss_pred ccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHH----hcCCeEEEeccCCC-CcccccceEEEec
Q 000711 1252 WEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPA-LIPFHSLELRLID 1326 (1338)
Q Consensus 1252 ~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~----~~~~TvI~IAHRl~-~i~~~d~~l~l~~ 1326 (1338)
+.++|||||+||++|||||..+|+|++-|||||+||+.+-+.+.+.++ +.|.|+|+.-|..+ -.+|+|+++-|.+
T Consensus 144 ra~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~ 223 (258)
T COG3638 144 RASTLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKA 223 (258)
T ss_pred HhccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecC
Confidence 235799999999999999999999999999999999999887766543 46999999999998 5589999999977
Q ss_pred CC
Q 000711 1327 GE 1328 (1338)
Q Consensus 1327 g~ 1328 (1338)
|+
T Consensus 224 G~ 225 (258)
T COG3638 224 GR 225 (258)
T ss_pred Cc
Confidence 64
No 228
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=4.5e-36 Score=334.50 Aligned_cols=197 Identities=22% Similarity=0.284 Sum_probs=165.4
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------c-ccccEEE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIFY 517 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~-~~~~i~~ 517 (1338)
++++||++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .++.++|
T Consensus 1 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (232)
T cd03218 1 LRAENLSKRYG-KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGY 79 (232)
T ss_pred CeEEEEEEEeC-CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEE
Confidence 46899999996 46799999999999999999999999999999999999999999999998641 1 2356999
Q ss_pred EecCCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccC
Q 000711 518 VPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 596 (1338)
Q Consensus 518 v~Q~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~ 596 (1338)
+||++.++.+ |++||+.++............+++.++++.+++.+..++.+ .+||||||||++||||++.+
T Consensus 80 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~~~ 151 (232)
T cd03218 80 LPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLRKSKA--------SSLSGGERRRVEIARALATN 151 (232)
T ss_pred ecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHHHHHHhcC
Confidence 9999988876 99999987532111001112345678899999987777655 68999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 597 PKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 597 p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
|+++||||||++||+.+.+.+++.+++ .++|+|++||+++.+ ..+|++++|+++
T Consensus 152 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G 209 (232)
T cd03218 152 PKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEG 209 (232)
T ss_pred CCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999987764 488999999999755 579999999863
No 229
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.7e-36 Score=329.46 Aligned_cols=196 Identities=22% Similarity=0.305 Sum_probs=161.0
Q ss_pred EEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcCC
Q 000711 1101 SFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQR 1180 (1338)
Q Consensus 1101 ~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQd 1180 (1338)
+++||+++|++.+++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++.. ...+++++|+||+
T Consensus 1 ~~~~l~~~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~i~~~~q~ 79 (205)
T cd03226 1 RIENISFSYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA-KERRKSIGYVMQD 79 (205)
T ss_pred CcccEEEEeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh-HHhhcceEEEecC
Confidence 368999999753679999999999999999999999999999999999999999999999998854 2234579999999
Q ss_pred C--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCCh
Q 000711 1181 P--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1338)
Q Consensus 1181 P--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 1258 (1338)
| .+|..|++||+.++.... + ..+..+.++++.+++.+..++. ...|||
T Consensus 80 ~~~~~~~~tv~e~l~~~~~~~----------~----------~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 129 (205)
T cd03226 80 VDYQLFTDSVREELLLGLKEL----------D----------AGNEQAETVLKDLDLYALKERH----------PLSLSG 129 (205)
T ss_pred hhhhhhhccHHHHHhhhhhhc----------C----------ccHHHHHHHHHHcCCchhcCCC----------chhCCH
Confidence 8 467899999997642110 0 0123456677777775443332 246999
Q ss_pred hHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEEecC
Q 000711 1259 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDG 1327 (1338)
Q Consensus 1259 GQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l~~g 1327 (1338)
|||||++||||++++|++|||||||++||+++.+.+.+.+++ .++|+|+++|+++.+ +++|+++.|.+|
T Consensus 130 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G 202 (205)
T cd03226 130 GQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANG 202 (205)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999888776643 489999999999866 579999999765
No 230
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-36 Score=341.08 Aligned_cols=200 Identities=22% Similarity=0.300 Sum_probs=171.1
Q ss_pred CcEEEEeEEEEcCC-----CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-------c
Q 000711 443 NYIEFSGVKVVTPT-----GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------D 510 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~-----~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~ 510 (1338)
..++++|+++.|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 36899999999974 25799999999999999999999999999999999999999999999998641 2
Q ss_pred ccccEEEEecCCC--CCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHH
Q 000711 511 LNKEIFYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1338)
Q Consensus 511 ~~~~i~~v~Q~~~--l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1338)
.++.++|+||+|. ++..|+.+|+.++...........++++.++++.+++.++.++.+ .+||||||||++
T Consensus 83 ~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LS~G~~qrv~ 154 (280)
T PRK13633 83 IRNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP--------HLLSGGQKQRVA 154 (280)
T ss_pred HhhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc--------ccCCHHHHHHHH
Confidence 3567999999984 566699999988632111111112456788999999999888876 689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 589 lARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
|||||+.+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+..||++++|+++
T Consensus 155 laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G 220 (280)
T PRK13633 155 IAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSG 220 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECC
Confidence 99999999999999999999999999999988764 389999999999998889999999863
No 231
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-36 Score=327.27 Aligned_cols=201 Identities=27% Similarity=0.351 Sum_probs=171.5
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcc---ccCCcccEE
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE---EAGSGCGIF 1175 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~---~~~lr~~i~ 1175 (1338)
.|+++|++|+||+..++|+|+||+|++||.++|+|+||||||||+++|.|+++|.+|+|.+||.++.. ...+|++++
T Consensus 3 ~i~~~~l~~~y~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~vG 82 (235)
T COG1122 3 MIEAENLSFRYPGRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKVG 82 (235)
T ss_pred eEEEEEEEEEcCCCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcceE
Confidence 58999999999887889999999999999999999999999999999999999999999999999873 356677899
Q ss_pred EEcCCC--CCCCCCHHHHhcCCCc---hHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC
Q 000711 1176 YVPQRP--YTCLGTLRDQIIYPLS---REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1338)
Q Consensus 1176 ~VpQdP--~LF~GTIReNL~~p~~---~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 1250 (1338)
+|.|+| .+|..||.+.++|+.. ...++ .+..+.++++.+++.++.++.|
T Consensus 83 ~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e-------------------~~~rv~~~l~~vgl~~~~~r~p------- 136 (235)
T COG1122 83 LVFQNPDDQLFGPTVEDEVAFGLENLGLPREE-------------------IEERVAEALELVGLEELLDRPP------- 136 (235)
T ss_pred EEEECcccccccCcHHHHHhhchhhcCCCHHH-------------------HHHHHHHHHHHcCchhhccCCc-------
Confidence 999999 7999999999988432 11110 1345667888888876654433
Q ss_pred cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCC-CcccccceEEEe
Q 000711 1251 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPA-LIPFHSLELRLI 1325 (1338)
Q Consensus 1251 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~-~i~~~d~~l~l~ 1325 (1338)
.+||||||||+|||.+|..+|+|||||||||+||+...+.+.+.+++ .|.|+|+|+|+++ ...++|++++|.
T Consensus 137 ---~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 137 ---FNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred ---cccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 46999999999999999999999999999999999998877666543 3789999999997 556699999998
Q ss_pred cCC
Q 000711 1326 DGE 1328 (1338)
Q Consensus 1326 ~g~ 1328 (1338)
+|+
T Consensus 214 ~G~ 216 (235)
T COG1122 214 DGK 216 (235)
T ss_pred CCE
Confidence 865
No 232
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=4.6e-36 Score=330.22 Aligned_cols=203 Identities=23% Similarity=0.261 Sum_probs=163.2
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-----CCcccE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 1174 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~-----~lr~~i 1174 (1338)
|+++||++.|++.+++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++...+ ..++++
T Consensus 1 l~~~~l~~~~~~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 80 (214)
T cd03292 1 IEFINVTKTYPNGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRKI 80 (214)
T ss_pred CEEEEEEEEeCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHhe
Confidence 578999999976567999999999999999999999999999999999999999999999999886542 234579
Q ss_pred EEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCccc
Q 000711 1175 FYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1338)
Q Consensus 1175 ~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 1253 (1338)
+||||+|.+|. .|+++|+.++.... +. ..+..++.+.++++.+++....++. .
T Consensus 81 ~~v~q~~~~~~~~t~~~~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~ 134 (214)
T cd03292 81 GVVFQDFRLLPDRNVYENVAFALEVT----------GV------PPREIRKRVPAALELVGLSHKHRAL----------P 134 (214)
T ss_pred EEEecCchhccCCcHHHHHHHHHHHc----------CC------CHHHHHHHHHHHHHHcCCHHHhhCC----------h
Confidence 99999999998 49999997542100 00 0000123455666776665433322 2
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCcc-cccceEEEecCC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIP-FHSLELRLIDGE 1328 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i~-~~d~~l~l~~g~ 1328 (1338)
.+||||||||++||||++++|+++||||||++||+++.+.+.+.+++ .++|+|+|+|++..+. ++|+++.|.+|+
T Consensus 135 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~ 213 (214)
T cd03292 135 AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGK 213 (214)
T ss_pred hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCc
Confidence 46999999999999999999999999999999999999888776643 4899999999998765 689999997653
No 233
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=5.5e-36 Score=345.81 Aligned_cols=197 Identities=25% Similarity=0.282 Sum_probs=166.5
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-----ccccccEEEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYV 518 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v 518 (1338)
.|+++||++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|+
T Consensus 4 ~i~~~~l~~~~~-~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~v 82 (303)
T TIGR01288 4 AIDLVGVSKSYG-DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIGVV 82 (303)
T ss_pred EEEEEeEEEEeC-CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEEEE
Confidence 589999999996 4679999999999999999999999999999999999999999999999864 1235679999
Q ss_pred ecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000711 519 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1338)
Q Consensus 519 ~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1338)
||++.++. .|++||+.+.............+++.++++.+++.+..++.+ .+||||||||++|||||+++|
T Consensus 83 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~--------~~LSgG~~qrv~la~al~~~p 154 (303)
T TIGR01288 83 PQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADVRV--------ALLSGGMKRRLTLARALINDP 154 (303)
T ss_pred eccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCch--------hhCCHHHHHHHHHHHHHhcCC
Confidence 99998775 699999975321100000111235667888999988777655 689999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 598 KFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 598 ~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 155 ~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~ 210 (303)
T TIGR01288 155 QLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLES 210 (303)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999998765 4899999999999875 7999999986
No 234
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-35 Score=330.61 Aligned_cols=200 Identities=26% Similarity=0.410 Sum_probs=171.8
Q ss_pred EEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEE
Q 000711 445 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1338)
Q Consensus 445 i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 517 (1338)
++++|+++.|++. +++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+ ..+++.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4689999998653 379999999999999999999999999999999999999999999999854 123567999
Q ss_pred EecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCcc---ccCCCCCChhHHHHHHHHHHHc
Q 000711 518 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKE---INWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 518 v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~---~~~g~~LSgGqkQRlalARal~ 594 (1338)
+||+++++..|++||+.++... ....++.+.++..++.++++.++.+.. ......||||||||++|||||+
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~ 154 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPG------ATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALL 154 (234)
T ss_pred eCCCCeeccccHHHHhhccCCC------CCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHh
Confidence 9999999999999999886432 234556677788888888877653222 1346789999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+..||++++|+++
T Consensus 155 ~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G 212 (234)
T cd03251 155 KDPPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDG 212 (234)
T ss_pred cCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCC
Confidence 99999999999999999999999998865 388999999999998889999999874
No 235
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=4.9e-36 Score=329.95 Aligned_cols=203 Identities=24% Similarity=0.328 Sum_probs=164.0
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-----CCcccE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 1174 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~-----~lr~~i 1174 (1338)
|+++|+++.|+++.++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++.... ..+.++
T Consensus 2 l~~~~l~~~~~~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 81 (214)
T TIGR02673 2 IEFHNVSKAYPGGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRRI 81 (214)
T ss_pred EEEEeeeEEeCCCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhhe
Confidence 689999999965567999999999999999999999999999999999999999999999999987642 235579
Q ss_pred EEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCccc
Q 000711 1175 FYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1338)
Q Consensus 1175 ~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 1253 (1338)
+|+||+|.+|. .|+++|+.++.. ..+. .+...++.+.++++.+++....++. .
T Consensus 82 ~~~~q~~~~~~~~tv~~~l~~~~~----------~~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~ 135 (214)
T TIGR02673 82 GVVFQDFRLLPDRTVYENVALPLE----------VRGK------KEREIQRRVGAALRQVGLEHKADAF----------P 135 (214)
T ss_pred EEEecChhhccCCcHHHHHHHHHH----------HcCC------CHHHHHHHHHHHHHHcCChhhhhCC----------h
Confidence 99999999986 699999964310 0000 0001123456667777775433322 2
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCcc-cccceEEEecCC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIP-FHSLELRLIDGE 1328 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i~-~~d~~l~l~~g~ 1328 (1338)
..||||||||++||||++++|+++||||||++||.++...+.+.+++ .++|+|+|+|+++.+. ++|+++.|.+|+
T Consensus 136 ~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 136 EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 46999999999999999999999999999999999999888776643 4899999999997654 689999997653
No 236
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-36 Score=334.48 Aligned_cols=207 Identities=27% Similarity=0.356 Sum_probs=173.7
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--CCcccEEEE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYV 1177 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~--~lr~~i~~V 1177 (1338)
|+++|+++.|++..++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.... ..+..++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 80 (236)
T cd03253 1 IEFENVTFAYDPGRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGVV 80 (236)
T ss_pred CEEEEEEEEeCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEEE
Confidence 578999999976667999999999999999999999999999999999999999999999999887642 334579999
Q ss_pred cCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCc-ccCCC
Q 000711 1178 PQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WEDIL 1256 (1338)
Q Consensus 1178 pQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~-~g~~L 1256 (1338)
||+|.+|++|+++|+.++.... .+..+.+.++.+++...++.+|.|+++..+ +..+|
T Consensus 81 ~q~~~~~~~tv~~nl~~~~~~~----------------------~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~L 138 (236)
T cd03253 81 PQDTVLFNDTIGYNIRYGRPDA----------------------TDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKL 138 (236)
T ss_pred CCCChhhcchHHHHHhhcCCCC----------------------CHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcC
Confidence 9999999999999997653210 112233344555665666666778888763 56789
Q ss_pred ChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1257 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1257 SgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
|+|||||++|||||+++|++|||||||++||+++.+.+.+.++. .+.|+|+++|+++.+..+|+++.|.+|+
T Consensus 139 S~G~~~rl~la~aL~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~ 212 (236)
T cd03253 139 SGGEKQRVAIARAILKNPPILLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGR 212 (236)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999888776643 2889999999999888899999997664
No 237
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=4e-36 Score=328.71 Aligned_cols=192 Identities=25% Similarity=0.330 Sum_probs=163.3
Q ss_pred EEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----------cccccEE
Q 000711 447 FSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------DLNKEIF 516 (1338)
Q Consensus 447 ~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----------~~~~~i~ 516 (1338)
++||++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++
T Consensus 1 i~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~ 79 (206)
T TIGR03608 1 LKNISKKFG-DKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKLG 79 (206)
T ss_pred CcceEEEEC-CEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCee
Confidence 468899886 46899999999999999999999999999999999999999999999998641 1245799
Q ss_pred EEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000711 517 YVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1338)
Q Consensus 517 ~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1338)
|++|++.++. .|++||+.++............+++.++++.+++++..++.+ .+||||||||++|||||++
T Consensus 80 ~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~lS~G~~qr~~laral~~ 151 (206)
T TIGR03608 80 YLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQKI--------YELSGGEQQRVALARAILK 151 (206)
T ss_pred EEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcCCh--------hhCCHHHHHHHHHHHHHHc
Confidence 9999998876 699999987432111001122456788999999988777755 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHhhcceEEEc
Q 000711 596 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSL 647 (1338)
Q Consensus 596 ~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~~~d~i~~l 647 (1338)
+|+++||||||++||+.+.+.+.+.+++ .|.|+|++||+++....||++++|
T Consensus 152 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 152 DPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred CCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999998865 389999999999988899999875
No 238
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.9e-36 Score=295.56 Aligned_cols=185 Identities=27% Similarity=0.408 Sum_probs=161.3
Q ss_pred CCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCH
Q 000711 456 TGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTL 529 (1338)
Q Consensus 456 ~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl 529 (1338)
++.++|+++||++.+||.++|+||||||||||+|+++-+.+|++|++.+.|.+ ..+|.+|+||.|.|-+|.+||
T Consensus 14 ~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~tV 93 (223)
T COG4619 14 GDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGDTV 93 (223)
T ss_pred CCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccccccch
Confidence 46789999999999999999999999999999999999999999999999976 346789999999999999999
Q ss_pred HHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCC
Q 000711 530 RDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAV 609 (1338)
Q Consensus 530 ~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~L 609 (1338)
.||+.||..... ...+.+...+.++.+++.+.+-..+ ..+||||||||+||+|-|.--|+||+||||||||
T Consensus 94 eDNlifP~~~r~--rr~dr~aa~~llar~~l~~~~L~k~-------it~lSGGE~QriAliR~Lq~~P~ILLLDE~TsAL 164 (223)
T COG4619 94 EDNLIFPWQIRN--RRPDRAAALDLLARFALPDSILTKN-------ITELSGGEKQRIALIRNLQFMPKILLLDEITSAL 164 (223)
T ss_pred hhccccchHHhc--cCCChHHHHHHHHHcCCchhhhcch-------hhhccchHHHHHHHHHHhhcCCceEEecCchhhc
Confidence 999999965322 2346677888999999876543322 2689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHH----HccCCeEEEEecChhh-HhhcceEEEccC
Q 000711 610 TTDMEERFCAKV----RAMGTSCITISHRPAL-VAFHDVVLSLDG 649 (1338)
Q Consensus 610 D~~~~~~i~~~l----~~~~~t~i~itH~~~~-~~~~d~i~~l~~ 649 (1338)
|+.+.+.+-+.+ ++.+..++.|||+.+. ++++|+++.+..
T Consensus 165 D~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~ 209 (223)
T COG4619 165 DESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQP 209 (223)
T ss_pred ChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEecc
Confidence 999987766654 4568999999999987 889999998865
No 239
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.6e-35 Score=324.87 Aligned_cols=197 Identities=18% Similarity=0.314 Sum_probs=167.8
Q ss_pred EEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----------cccccE
Q 000711 446 EFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------DLNKEI 515 (1338)
Q Consensus 446 ~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----------~~~~~i 515 (1338)
.+.|+.+.|+.+.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.+
T Consensus 2 ~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 81 (218)
T cd03290 2 QVTNGYFSWGSGLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYSV 81 (218)
T ss_pred eeeeeEEecCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcceE
Confidence 4678899998777899999999999999999999999999999999999999999999998641 123579
Q ss_pred EEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHH
Q 000711 516 FYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARL 592 (1338)
Q Consensus 516 ~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARa 592 (1338)
+|++|+|+++..|++||+.++.. ..+++..++++.+++.+.++..|.+.++ .....||||||||++||||
T Consensus 82 ~~~~q~~~~~~~t~~~nl~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~lara 154 (218)
T cd03290 82 AYAAQKPWLLNATVEENITFGSP-------FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARA 154 (218)
T ss_pred EEEcCCCccccccHHHHHhhcCc-------CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHH
Confidence 99999999998999999988642 1234567788888988877766543322 2357899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHH--H---HHccCCeEEEEecChhhHhhcceEEEccC
Q 000711 593 FYHKPKFAILDECTSAVTTDMEERFCA--K---VRAMGTSCITISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 593 l~~~p~illLDEpts~LD~~~~~~i~~--~---l~~~~~t~i~itH~~~~~~~~d~i~~l~~ 649 (1338)
++.+|+++||||||++||+.+.+.+++ . +++.|+|+|++||+.+.+..+|++++|++
T Consensus 155 l~~~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~ 216 (218)
T cd03290 155 LYQNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKD 216 (218)
T ss_pred HhhCCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecC
Confidence 999999999999999999999887776 3 33458999999999999999999999975
No 240
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.1e-35 Score=333.37 Aligned_cols=201 Identities=24% Similarity=0.346 Sum_probs=175.6
Q ss_pred CCcEEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------cccccc
Q 000711 442 ANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKE 514 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~ 514 (1338)
.+.|+++|+++.|++. +++++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ ...++.
T Consensus 17 ~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~~ 96 (257)
T cd03288 17 GGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSR 96 (257)
T ss_pred CceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhhh
Confidence 5689999999999753 579999999999999999999999999999999999999999999999864 124567
Q ss_pred EEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHH
Q 000711 515 IFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMAR 591 (1338)
Q Consensus 515 i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalAR 591 (1338)
++|++|+|+++.+|++||+..... ...+++.++++.+++.+.++.+|.+.++ .++.+||||||||++|||
T Consensus 97 i~~v~q~~~l~~~tv~~nl~~~~~-------~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~lar 169 (257)
T cd03288 97 LSIILQDPILFSGSIRFNLDPECK-------CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLAR 169 (257)
T ss_pred EEEECCCCcccccHHHHhcCcCCC-------CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHH
Confidence 999999999999999999864311 2345677888888999888887643322 367899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhhcceEEEccC
Q 000711 592 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 592 al~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i~~l~~ 649 (1338)
|++++|+++||||||++||+.+++.+++.+++ .+.|+|++||+++.+..||++++|++
T Consensus 170 al~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~ 229 (257)
T cd03288 170 AFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSR 229 (257)
T ss_pred HHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEEC
Confidence 99999999999999999999999999998865 48999999999999988999999986
No 241
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=2.2e-35 Score=327.51 Aligned_cols=203 Identities=26% Similarity=0.418 Sum_probs=166.2
Q ss_pred CCcEEEEeEEEEcCCC--CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------cccc
Q 000711 442 ANYIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNK 513 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~ 513 (1338)
.+.++++|+++.|++. .++++|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.+. ..++
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 4679999999999753 4799999999999999999999999999999999999999999999998641 2346
Q ss_pred cEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCc---cccCCCCCChhHHHHHHHH
Q 000711 514 EIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEK---EINWGDELSLGEQQRLGMA 590 (1338)
Q Consensus 514 ~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---~~~~g~~LSgGqkQRlalA 590 (1338)
.++|+||+|.++..|++||+.++.... ...++.+..+..++.++++.++.+. ......+||||||||++||
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~------~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~la 162 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSC------SFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIA 162 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCC------CHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHH
Confidence 799999999999899999998764321 1222333333444445555443211 1123478999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 591 Ral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
||++++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+..+|++++|+++
T Consensus 163 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g 224 (226)
T cd03248 163 RALIRNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGG 224 (226)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCC
Confidence 999999999999999999999999999998875 368999999999999889999999863
No 242
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.5e-35 Score=325.43 Aligned_cols=194 Identities=22% Similarity=0.321 Sum_probs=165.3
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC----ccccccEEEEec
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYVPQ 520 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~----~~~~~~i~~v~Q 520 (1338)
++++||++.|+. .++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+||
T Consensus 1 ~~~~~l~~~~~~---~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q 77 (213)
T TIGR01277 1 LALDKVRYEYEH---LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLFQ 77 (213)
T ss_pred CeEEeeeEEeCC---cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEec
Confidence 368999999862 4689999999999999999999999999999999999999999999864 134567999999
Q ss_pred CCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000711 521 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1338)
Q Consensus 521 ~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1338)
+|.++. .|++||+.++...........++++.++++.+++++..++.| .+||||||||++||||++.+|++
T Consensus 78 ~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~laral~~~p~l 149 (213)
T TIGR01277 78 ENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP--------EQLSGGQRQRVALARCLVRPNPI 149 (213)
T ss_pred cCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc--------ccCCHHHHHHHHHHHHHhcCCCE
Confidence 998886 599999987532110001123456788999999998888876 68999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 600 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 600 llLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
++|||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|++++|++
T Consensus 150 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~ 204 (213)
T TIGR01277 150 LLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQ 204 (213)
T ss_pred EEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEEC
Confidence 999999999999999999888754 3789999999999875 6999999976
No 243
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-36 Score=339.59 Aligned_cols=197 Identities=25% Similarity=0.364 Sum_probs=168.3
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc--------cccccEE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLNKEIF 516 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~--------~~~~~i~ 516 (1338)
++++||++.|++++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.|+
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 81 (275)
T PRK13639 2 LETRDLKYSYPDGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTVG 81 (275)
T ss_pred EEEEEEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhheE
Confidence 78999999997556799999999999999999999999999999999999999999999998641 1346799
Q ss_pred EEecCC--CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 517 YVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 517 ~v~Q~~--~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
|+||+| .++..|++||+.++............+++.++++.+++.++.++.+ .+||||||||++||||++
T Consensus 82 ~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~--------~~LS~Gq~qrv~laral~ 153 (275)
T PRK13639 82 IVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENKPP--------HHLSGGQKKRVAIAGILA 153 (275)
T ss_pred EEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcCCh--------hhCCHHHHHHHHHHHHHh
Confidence 999997 4677899999987532111001112346778999999988877765 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
.+|++++|||||++||+.+...+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 154 ~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~ 212 (275)
T PRK13639 154 MKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSD 212 (275)
T ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999988764 3899999999999875 7999999986
No 244
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-36 Score=341.85 Aligned_cols=198 Identities=26% Similarity=0.352 Sum_probs=166.3
Q ss_pred cEEEEeEEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----------
Q 000711 444 YIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------- 509 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~----~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------- 509 (1338)
.++++|+++.|+++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 37899999999642 4799999999999999999999999999999999999999999999999641
Q ss_pred cccccEEEEecCC--CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCc-hHHhcCCCCccccCCCCCChhHHHH
Q 000711 510 DLNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQR 586 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~--~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkQR 586 (1338)
..++.++|+||+| .++..|++||+.++............+++.++++.++++ ++.++.+ .+||||||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~--------~~LSgGq~qr 153 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSP--------FELSGGQMRR 153 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCc--------ccCCHHHHHH
Confidence 1245799999998 567789999998753211100111234577889999997 5666655 6899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 587 lalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
++|||||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..||++++|++
T Consensus 154 l~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~ 220 (287)
T PRK13641 154 VAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEH 220 (287)
T ss_pred HHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999888764 489999999999986 58999999986
No 245
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-36 Score=340.27 Aligned_cols=200 Identities=27% Similarity=0.385 Sum_probs=170.6
Q ss_pred CcEEEEeEEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCc---cEEEeCCCCc------ccc
Q 000711 443 NYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVS---GHIAKPGVGS------DLN 512 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~-~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~---G~i~~~~~~~------~~~ 512 (1338)
..++++|+++.|++ .+++++|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.+. ..+
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 46999999999975 3579999999999999999999999999999999999999988 8999998651 234
Q ss_pred ccEEEEecCCC--CCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000711 513 KEIFYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1338)
Q Consensus 513 ~~i~~v~Q~~~--l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1338)
++++|+||+|. ++..|+.||+.++...........++++.++++.++++++.++.| .+||||||||++||
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~--------~~LS~G~~qrv~la 155 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP--------ANLSGGQKQRVAIA 155 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc--------ccCCHHHHHHHHHH
Confidence 67999999984 567899999987632211000111245778999999998888877 68999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 591 Ral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
|||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+..||++++|+++
T Consensus 156 ral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G 219 (282)
T PRK13640 156 GILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDG 219 (282)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999988754 389999999999999899999999863
No 246
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=9.9e-36 Score=329.56 Aligned_cols=194 Identities=22% Similarity=0.342 Sum_probs=162.7
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------c-ccccEEE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIFY 517 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~-~~~~i~~ 517 (1338)
|+++||++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .++.++|
T Consensus 1 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (222)
T cd03224 1 LEVENLNAGYG-KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGY 79 (222)
T ss_pred CEEeeEEeecC-CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEE
Confidence 47899999986 46899999999999999999999999999999999999999999999998541 1 2456999
Q ss_pred EecCCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHc-CCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000711 518 VPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNV-DLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1338)
Q Consensus 518 v~Q~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~-~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1338)
+||++.++.. |++||+.++..... .....+++.++++.+ ++.+..++.+ .+||||||||++||||+++
T Consensus 80 ~~q~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~ 149 (222)
T cd03224 80 VPEGRRIFPELTVEENLLLGAYARR--RAKRKARLERVYELFPRLKERRKQLA--------GTLSGGEQQMLAIARALMS 149 (222)
T ss_pred eccccccCCCCcHHHHHHHHhhhcC--chhHHHHHHHHHHHHHhhhhhhhCch--------hhCCHHHHHHHHHHHHHhc
Confidence 9999988775 99999987643211 111234556677776 4665555544 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 596 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 596 ~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
+|++++|||||++||+.+...+++.+++ .++|+|++||+++.+ ..+|++++|++
T Consensus 150 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 207 (222)
T cd03224 150 RPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLER 207 (222)
T ss_pred CCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeC
Confidence 9999999999999999999999998864 478999999999976 56999999986
No 247
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.4e-35 Score=333.46 Aligned_cols=197 Identities=23% Similarity=0.262 Sum_probs=166.3
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCC-----ccEEEeCCCCc--------cc
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV-----SGHIAKPGVGS--------DL 511 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~-----~G~i~~~~~~~--------~~ 511 (1338)
++++||++.|++ .++++|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.+. ..
T Consensus 2 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~ 80 (247)
T TIGR00972 2 IEIENLNLFYGE-KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVEL 80 (247)
T ss_pred EEEEEEEEEECC-eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHH
Confidence 789999999964 57999999999999999999999999999999999999998 99999998641 12
Q ss_pred cccEEEEecCCCCCCCCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCCc----hHHhcCCCCccccCCCCCChhHHHH
Q 000711 512 NKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLE----YLLDRYPPEKEINWGDELSLGEQQR 586 (1338)
Q Consensus 512 ~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~----~~~~~~~~~~~~~~g~~LSgGqkQR 586 (1338)
++.++|+||++.++..|++||+.++...... .....++++.++++.+++. +..++.+ .+||||||||
T Consensus 81 ~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LSgG~~qr 152 (247)
T TIGR00972 81 RRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSA--------LGLSGGQQQR 152 (247)
T ss_pred HhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCc--------ccCCHHHHHH
Confidence 4679999999998889999999875321110 0111235677889999997 5555544 6899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 587 lalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
++|||||+.+|+++||||||++||+.+...+++.+++ .++|+|++||+++.+ ..+|++++|+++
T Consensus 153 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G 219 (247)
T TIGR00972 153 LCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDG 219 (247)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999998865 258999999999976 579999999863
No 248
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1e-35 Score=338.11 Aligned_cols=198 Identities=25% Similarity=0.380 Sum_probs=167.3
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc---------cccc
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNK 513 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~~ 513 (1338)
..|+++||++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++
T Consensus 6 ~~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 6 NLVDMRGVSFTRG-NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred ceEEEeCeEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 4699999999985 46899999999999999999999999999999999999999999999998541 1245
Q ss_pred cEEEEecCCCCCCC-CHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHH
Q 000711 514 EIFYVPQRPYTAVG-TLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 591 (1338)
Q Consensus 514 ~i~~v~Q~~~l~~~-tl~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalAR 591 (1338)
.++|+||++.++.. |+.||+.++...... ......+++.++++.+++.+..++.+ .+||||||||++|||
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgGq~qrv~lar 156 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMP--------SELSGGMARRAALAR 156 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHHHH
Confidence 79999999988875 999999875321100 01112345677899999988777765 689999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 592 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 592 al~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
||+++|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 157 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~ 219 (269)
T PRK11831 157 AIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVAD 219 (269)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEEC
Confidence 99999999999999999999999999888764 2789999999998775 6999999986
No 249
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-36 Score=305.86 Aligned_cols=198 Identities=26% Similarity=0.311 Sum_probs=170.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-----ccccccEEEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYV 518 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v 518 (1338)
++++.+++++|++...+++|+||+++.||+++|.||||+||||+||+|++++.|++|.|.++|.| ...+++||.+
T Consensus 1 Ml~v~~l~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGVl 80 (245)
T COG4555 1 MLEVTDLTKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGVL 80 (245)
T ss_pred CeeeeehhhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhccee
Confidence 36889999999875568999999999999999999999999999999999999999999999986 3467899999
Q ss_pred ecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000711 519 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1338)
Q Consensus 519 ~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1338)
+-+.-++. .|++|||.|...-..........++.++.+.+++.+.+++.. .++|-|+|||++|||||+++|
T Consensus 81 ~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~rRv--------~~~S~G~kqkV~iARAlvh~P 152 (245)
T COG4555 81 FGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLDRRV--------GEFSTGMKQKVAIARALVHDP 152 (245)
T ss_pred cCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHHHHH--------hhhchhhHHHHHHHHHHhcCC
Confidence 97666654 699999987532222222234567888999999999988854 589999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHH---ccCCeEEEEecChhhHh-hcceEEEccC
Q 000711 598 KFAILDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 598 ~illLDEpts~LD~~~~~~i~~~l~---~~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
++++||||||+||..+.+.+.+.++ +.|+++|+.||.++.++ .||+++++..
T Consensus 153 ~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~ 208 (245)
T COG4555 153 SILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHK 208 (245)
T ss_pred CeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEec
Confidence 9999999999999999988877654 46999999999999987 8999999986
No 250
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-36 Score=342.14 Aligned_cols=200 Identities=24% Similarity=0.253 Sum_probs=165.2
Q ss_pred CcEEEEeEEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc---------
Q 000711 443 NYIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------- 509 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~----~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~--------- 509 (1338)
+.|+++|+++.|++. .++|+|+||++++||+++|+||||||||||+|+|+|+++|++|+|.++|.+.
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 569999999999753 2599999999999999999999999999999999999999999999988531
Q ss_pred --cccccEEEEecCC--CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCc-hHHhcCCCCccccCCCCCChhHH
Q 000711 510 --DLNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQ 584 (1338)
Q Consensus 510 --~~~~~i~~v~Q~~--~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqk 584 (1338)
.+++.++|+||+| .++..|++||+.++............+++.++++.+++. ++.++.+ .+||||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~--------~~LS~Gq~ 156 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSP--------FELSGGQK 156 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCCh--------hhCCHHHH
Confidence 2345799999998 456789999998753211100011123466788888884 5655544 68999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 585 QRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
||++|||||+.+|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+ +.||++++|+++
T Consensus 157 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G 227 (289)
T PRK13645 157 RRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEG 227 (289)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999887754 389999999999976 579999999863
No 251
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=9.2e-36 Score=346.25 Aligned_cols=199 Identities=25% Similarity=0.293 Sum_probs=168.5
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-----ccccccEEE
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFY 517 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~ 517 (1338)
..|+++||++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|
T Consensus 40 ~~i~i~nl~k~y~-~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ig~ 118 (340)
T PRK13536 40 VAIDLAGVSKSYG-DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARARIGV 118 (340)
T ss_pred eeEEEEEEEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhccEEE
Confidence 4699999999996 4679999999999999999999999999999999999999999999999965 124567999
Q ss_pred EecCCCCC-CCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccC
Q 000711 518 VPQRPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 596 (1338)
Q Consensus 518 v~Q~~~l~-~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~ 596 (1338)
+||++.++ ..|++||+.+.............+++.++++.+++.+..++.+ .+||||||||++|||||+++
T Consensus 119 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~--------~~LS~G~kqrv~lA~aL~~~ 190 (340)
T PRK13536 119 VPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADARV--------SDLSGGMKRRLTLARALIND 190 (340)
T ss_pred EeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhCCCh--------hhCCHHHHHHHHHHHHHhcC
Confidence 99999875 5699999975321111000112345667888899988777655 68999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 597 PKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 597 p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
|+++||||||++||+.+...+++.+++ .|+|+|++||+++.+. .||+|++|+++
T Consensus 191 P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G 248 (340)
T PRK13536 191 PQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAG 248 (340)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999998865 4899999999999884 79999999863
No 252
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-36 Score=349.21 Aligned_cols=204 Identities=18% Similarity=0.274 Sum_probs=168.9
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEc
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~Vp 1178 (1338)
.|+++||++.|++..++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++......+++|+|||
T Consensus 3 ~l~i~~l~~~~~~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~ 82 (356)
T PRK11650 3 GLKLQAVRKSYDGKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMVF 82 (356)
T ss_pred EEEEEeEEEEeCCCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 48999999999656779999999999999999999999999999999999999999999999999987643445799999
Q ss_pred CCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1179 QRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1179 QdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
|+|.||. .|++|||.|+.... +. .....+..+.++++.++|.++.++.| .+||
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~~----------~~------~~~~~~~~~~~~l~~~gL~~~~~~~~----------~~LS 136 (356)
T PRK11650 83 QNYALYPHMSVRENMAYGLKIR----------GM------PKAEIEERVAEAARILELEPLLDRKP----------RELS 136 (356)
T ss_pred CCccccCCCCHHHHHHhHHhhc----------CC------CHHHHHHHHHHHHHHcCChhHhhCCh----------hhCC
Confidence 9999996 59999998763210 00 00001234566778888866655543 4699
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHH----hcCCeEEEeccCCC-CcccccceEEEecCC
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPA-LIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~----~~~~TvI~IAHRl~-~i~~~d~~l~l~~g~ 1328 (1338)
||||||+||||||+++|++|+||||||+||..+.+.+.+.++ +.|.|+|.|+|.+. ...++|+++.|.+|+
T Consensus 137 gGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~ 212 (356)
T PRK11650 137 GGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGV 212 (356)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999887766543 34899999999996 667899999997664
No 253
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-36 Score=339.28 Aligned_cols=198 Identities=23% Similarity=0.270 Sum_probs=166.3
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc--------cccccE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLNKEI 515 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~--------~~~~~i 515 (1338)
+++++||++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 1 ml~~~~l~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 1 MLATSDLWFRYQ-DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred CeEEEEEEEEcC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 378999999996 46799999999999999999999999999999999999999999999998641 124579
Q ss_pred EEEecCCC--CCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000711 516 FYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1338)
Q Consensus 516 ~~v~Q~~~--l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1338)
+|+||+|. ++..|+.+|+.++............+++.++++.+++.++.++.+ .+||||||||++|||||
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrl~laraL 151 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQPI--------QCLSHGQKKRVAIAGAL 151 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhcCCc--------hhCCHHHHHHHHHHHHH
Confidence 99999985 566789999987522111000111345677899999988776654 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 594 ~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
+.+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+ ..+|++++|+++
T Consensus 152 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G 212 (271)
T PRK13638 152 VLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQG 212 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999988764 488999999999987 579999999863
No 254
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-36 Score=340.91 Aligned_cols=198 Identities=23% Similarity=0.301 Sum_probs=164.6
Q ss_pred EEEEeEEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----------c
Q 000711 445 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------D 510 (1338)
Q Consensus 445 i~~~~v~~~~~~~----~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----------~ 510 (1338)
++++||++.|+++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 7899999999753 4799999999999999999999999999999999999999999999998641 1
Q ss_pred ccccEEEEecCC--CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCc-hHHhcCCCCccccCCCCCChhHHHHH
Q 000711 511 LNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQRL 587 (1338)
Q Consensus 511 ~~~~i~~v~Q~~--~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkQRl 587 (1338)
+++.|+|+||+| .++..|++||+.++............+.+.++++.+++. ...++.+ .+||||||||+
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LSgG~~qrv 154 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNP--------FELSGGQMRRV 154 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCc--------ccCCHHHHHHH
Confidence 345799999998 577889999998753211000011123466788888986 3555544 68999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 588 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 588 alARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
+|||||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..+|++++|+++
T Consensus 155 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G 221 (280)
T PRK13649 155 AIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKG 221 (280)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999998764 489999999999987 479999999863
No 255
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.1e-35 Score=330.29 Aligned_cols=200 Identities=28% Similarity=0.439 Sum_probs=170.6
Q ss_pred EEEEeEEEEcCC--CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------cccccEE
Q 000711 445 IEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEIF 516 (1338)
Q Consensus 445 i~~~~v~~~~~~--~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i~ 516 (1338)
++++|+++.|++ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 468999999875 35799999999999999999999999999999999999999999999998541 2245799
Q ss_pred EEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCcc---ccCCCCCChhHHHHHHHHHHH
Q 000711 517 YVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKE---INWGDELSLGEQQRLGMARLF 593 (1338)
Q Consensus 517 ~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~---~~~g~~LSgGqkQRlalARal 593 (1338)
|+||+|.++..|++||+.++... ...+++.+.++..++.++.+.+|.+.. .....+||||||||++||||+
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al 154 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPD------ATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARAL 154 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCC------CCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHH
Confidence 99999998889999999886432 123456677778888888777654322 134578999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 594 ~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
+.+|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+..||++++|+++
T Consensus 155 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G 213 (238)
T cd03249 155 LRNPKILLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNG 213 (238)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECC
Confidence 999999999999999999999999998865 478999999999998899999999873
No 256
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.8e-35 Score=321.95 Aligned_cols=186 Identities=26% Similarity=0.393 Sum_probs=160.5
Q ss_pred CCcEEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------cccccc
Q 000711 442 ANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKE 514 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~ 514 (1338)
.+.++++|+++.|++. +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.
T Consensus 4 ~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 4 HGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 4579999999999753 589999999999999999999999999999999999999999999999864 123568
Q ss_pred EEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 515 IFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 515 i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
++|+||+|.++.+|++||+.+... ...+++.+.++ +++ +...||||||||++||||++
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~-------~~~~~~~~~l~-------~~~--------~~~~LS~G~~qrv~laral~ 141 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDE-------YSDEEIYGALR-------VSE--------GGLNLSQGQRQLLCLARALL 141 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCC-------CCHHHHHHHhh-------ccC--------CCCcCCHHHHHHHHHHHHHh
Confidence 999999999999999999976421 23344455444 122 23689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhhcceEEEccC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i~~l~~ 649 (1338)
.+|+++||||||++||+.+.+.+++.+++ .++|+|++||+++.+..+|++++|++
T Consensus 142 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~ 198 (207)
T cd03369 142 KRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDA 198 (207)
T ss_pred hCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEEC
Confidence 99999999999999999999999998875 38899999999999888999999986
No 257
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=332.93 Aligned_cols=197 Identities=28% Similarity=0.367 Sum_probs=167.3
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------cccccEEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEIFY 517 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i~~ 517 (1338)
.++++|+++.|++ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++|
T Consensus 2 ~l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (258)
T PRK13548 2 MLEARNLSVRLGG-RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAV 80 (258)
T ss_pred eEEEEeEEEEeCC-eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEE
Confidence 4789999999964 6799999999999999999999999999999999999999999999998641 23467999
Q ss_pred EecCCCC-CCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc--
Q 000711 518 VPQRPYT-AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY-- 594 (1338)
Q Consensus 518 v~Q~~~l-~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~-- 594 (1338)
+||++.+ +..|++||+.++...........++++.++++.+++.+..++.+ .+||||||||++|||||+
T Consensus 81 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgGe~qrv~la~al~~~ 152 (258)
T PRK13548 81 LPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRDY--------PQLSGGEQQRVQLARVLAQL 152 (258)
T ss_pred EccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCCc--------ccCCHHHHHHHHHHHHHhcc
Confidence 9999987 66799999987542211101112346788999999988777765 689999999999999999
Q ss_pred ----cCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 595 ----HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 595 ----~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 153 ~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 216 (258)
T PRK13548 153 WEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQ 216 (258)
T ss_pred cccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEEC
Confidence 59999999999999999999998887753 4789999999999875 7999999986
No 258
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1e-35 Score=334.01 Aligned_cols=211 Identities=23% Similarity=0.273 Sum_probs=165.0
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-----CCcccE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 1174 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~-----~lr~~i 1174 (1338)
|+++||+++|+..+++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.... ..+.++
T Consensus 2 l~~~~l~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 81 (243)
T TIGR02315 2 LEVENLSKVYPNGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRRI 81 (243)
T ss_pred eEEEeeeeecCCCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhhe
Confidence 689999999974567999999999999999999999999999999999999999999999999886542 235579
Q ss_pred EEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCccc
Q 000711 1175 FYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1338)
Q Consensus 1175 ~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 1253 (1338)
+||||+|.+|. .|+++|+.++.......... ..+. .....+..+.++++.+++....++ ..
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~~l~~~~l~~~~~~----------~~ 143 (243)
T TIGR02315 82 GMIFQHYNLIERLTVLENVLHGRLGYKPTWRS--LLGR------FSEEDKERALSALERVGLADKAYQ----------RA 143 (243)
T ss_pred EEEcCCCcccccccHHHHHhhcccccccchhh--hhcc------ccHHHHHHHHHHHHHcCcHhhhcC----------Cc
Confidence 99999999886 69999997643110000000 0000 001113345667777777443322 13
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
..||||||||++||||++++|++||||||||+||.++.+.+.+.+++ .++|+|+|+|+++.+ +++|+++.|.+|+
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~ 223 (243)
T TIGR02315 144 DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGE 223 (243)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCE
Confidence 57999999999999999999999999999999999999888776543 389999999999876 6899999997664
No 259
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-36 Score=333.41 Aligned_cols=203 Identities=20% Similarity=0.243 Sum_probs=162.0
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-----CCcccE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 1174 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~-----~lr~~i 1174 (1338)
|+++||++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++.... ..+.++
T Consensus 1 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i 79 (235)
T cd03261 1 IELRGLTKSFGG-RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRM 79 (235)
T ss_pred CeEEEEEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcce
Confidence 578999999964 56999999999999999999999999999999999999999999999999886542 235679
Q ss_pred EEEcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCccc
Q 000711 1175 FYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1338)
Q Consensus 1175 ~~VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 1253 (1338)
+||||+|.+|.+ |+++|+.++..... +. ..+..+..+.++++.+++....++. .
T Consensus 80 ~~v~q~~~~~~~~tv~~~l~~~~~~~~---------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~ 134 (235)
T cd03261 80 GMLFQSGALFDSLTVFENVAFPLREHT---------RL------SEEEIREIVLEKLEAVGLRGAEDLY----------P 134 (235)
T ss_pred EEEccCcccCCCCcHHHHHHHHHhhcc---------CC------CHHHHHHHHHHHHHHcCCchhhcCC----------h
Confidence 999999999986 99999975311000 00 0000123345566777764433222 2
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
..||||||||++||||++++|++|||||||++||.++.+.+.+.+++ .++|||+|+|+++.+ .++|+++.|.+|+
T Consensus 135 ~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~ 214 (235)
T cd03261 135 AELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGK 214 (235)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCe
Confidence 46999999999999999999999999999999999999888776543 389999999999855 5799999997654
No 260
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2e-35 Score=325.78 Aligned_cols=204 Identities=18% Similarity=0.279 Sum_probs=167.7
Q ss_pred EEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc------CCcccE
Q 000711 1101 SFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA------GSGCGI 1174 (1338)
Q Consensus 1101 ~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~------~lr~~i 1174 (1338)
...|+.|.||...++++|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.... ..|.++
T Consensus 2 ~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 81 (218)
T cd03290 2 QVTNGYFSWGSGLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYSV 81 (218)
T ss_pred eeeeeEEecCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcceE
Confidence 46788899987778999999999999999999999999999999999999999999999999886532 234579
Q ss_pred EEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCc-cc
Q 000711 1175 FYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WE 1253 (1338)
Q Consensus 1175 ~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~-~g 1253 (1338)
+|+||+|.+|+.|+++||.++....+ ....++++.+++...++..|.|+++..+ ..
T Consensus 82 ~~~~q~~~~~~~t~~~nl~~~~~~~~-----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 138 (218)
T cd03290 82 AYAAQKPWLLNATVEENITFGSPFNK-----------------------QRYKAVTDACSLQPDIDLLPFGDQTEIGERG 138 (218)
T ss_pred EEEcCCCccccccHHHHHhhcCcCCH-----------------------HHHHHHHHHhCcHHHHHhCcCccccCcccCC
Confidence 99999999999999999986532111 1122334455555555556677777653 45
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHH--HH---HhcCCeEEEeccCCCCcccccceEEEecC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYR--LA---KDMGITFVTSSQRPALIPFHSLELRLIDG 1327 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~--~~---~~~~~TvI~IAHRl~~i~~~d~~l~l~~g 1327 (1338)
..||||||||++||||++++|++|||||||++||..+.+.+.+ ++ +..+.|+|+++|+.+.+..+|+++.|.+|
T Consensus 139 ~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G 217 (218)
T cd03290 139 INLSGGQRQRICVARALYQNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDG 217 (218)
T ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCC
Confidence 7899999999999999999999999999999999998876654 33 33589999999999988999999999765
No 261
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=337.51 Aligned_cols=199 Identities=26% Similarity=0.329 Sum_probs=168.9
Q ss_pred CcEEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------cccccE
Q 000711 443 NYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEI 515 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i 515 (1338)
..++++|+++.|++. +++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 6 ~~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 6 SIIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred ceEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 469999999999754 4699999999999999999999999999999999999999999999999641 235679
Q ss_pred EEEecCCC--CCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000711 516 FYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1338)
Q Consensus 516 ~~v~Q~~~--l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1338)
+|+||+|. ++..|+++|+.++............+++.++++.+++.++.++.+ .+||||||||++||||+
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~laral 157 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADYEP--------NALSGGQKQRVAIAGVL 157 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCc--------ccCCHHHHHHHHHHHHH
Confidence 99999984 556689999988642211001112346778899999988777655 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHhhcceEEEccC
Q 000711 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 594 ~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~~~d~i~~l~~ 649 (1338)
+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+..+|++++|++
T Consensus 158 ~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~ 217 (269)
T PRK13648 158 ALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNK 217 (269)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEEC
Confidence 999999999999999999999999888764 37899999999998888999999986
No 262
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.2e-36 Score=338.61 Aligned_cols=195 Identities=27% Similarity=0.325 Sum_probs=164.7
Q ss_pred EEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------cc----cccE
Q 000711 446 EFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DL----NKEI 515 (1338)
Q Consensus 446 ~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~----~~~i 515 (1338)
.++|+++.|. ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+ ++++
T Consensus 26 ~~~~~~~~~~-~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i 104 (269)
T cd03294 26 SKEEILKKTG-QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKI 104 (269)
T ss_pred hhhhhhhhcC-CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcE
Confidence 5678888874 56799999999999999999999999999999999999999999999998641 11 3579
Q ss_pred EEEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 516 FYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 516 ~~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
+|+||++.++. .|++||+.++...........++++.++++.+++.+..++.+ .+||||||||++||||++
T Consensus 105 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~Gq~qrv~lAral~ 176 (269)
T cd03294 105 SMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP--------DELSGGMQQRVGLARALA 176 (269)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc--------ccCCHHHHHHHHHHHHHh
Confidence 99999998874 699999987532110001112356788999999998888876 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
++|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+ ..+|++++|++
T Consensus 177 ~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~ 236 (269)
T cd03294 177 VDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKD 236 (269)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 99999999999999999999999998754 379999999999876 57999999986
No 263
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.4e-35 Score=329.14 Aligned_cols=207 Identities=25% Similarity=0.365 Sum_probs=167.2
Q ss_pred CCceEEeeeEEeCCCc--cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--CCcc
Q 000711 1097 QDSISFSKLDIITPSQ--KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGC 1172 (1338)
Q Consensus 1097 ~g~I~f~nV~f~yp~~--~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~--~lr~ 1172 (1338)
.|.|+++|+++.|++. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++.... ..+.
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 5789999999999753 47999999999999999999999999999999999999999999999999887542 3345
Q ss_pred cEEEEcCCCCCCCCCHHHHhcCCCch--HHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC
Q 000711 1173 GIFYVPQRPYTCLGTLRDQIIYPLSR--EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1338)
Q Consensus 1173 ~i~~VpQdP~LF~GTIReNL~~p~~~--~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 1250 (1338)
+++|+||+|.+|++|+++|+.++... .++..+. .+..++...++..+.|+++..
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~------------------------~~~~~~~~~l~~l~~gl~~~~ 144 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEA------------------------AQKAHAHSFISELASGYDTEV 144 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCCCHHHHHHH------------------------HHHcCcHHHHHhccccccchh
Confidence 79999999999999999999864321 1111111 111122223333333555443
Q ss_pred -cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecC
Q 000711 1251 -NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDG 1327 (1338)
Q Consensus 1251 -~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g 1327 (1338)
....+||||||||++||||++++|+++||||||++||+++.+.+.+.+++ .++|+|+|+|+++.+..+|+++.|.+|
T Consensus 145 ~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g 224 (226)
T cd03248 145 GEKGSQLSGGQKQRVAIARALIRNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGG 224 (226)
T ss_pred hcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCC
Confidence 23578999999999999999999999999999999999999988877654 368999999999988889999999765
No 264
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.2e-33 Score=302.51 Aligned_cols=442 Identities=17% Similarity=0.165 Sum_probs=260.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCC-CCCCchhHHHccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000711 165 KYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLC 243 (1338)
Q Consensus 165 ~~l~~~l~~~~R~~lt~~l~~~~~~~~~~~~~~~~d~-~~~n~~qRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 243 (1338)
......++.+ ...++|.+..++++.-|+.-+++ .......+++.|++.++-.++.+ .....+.+..+ .+....
T Consensus 69 ~lg~t~~gq~----~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~s~l-p~~~qa~il~l-~s~aYL 142 (546)
T COG4615 69 QLGLTTLGQH----FIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAFSRL-PELVQAIILTL-GSAAYL 142 (546)
T ss_pred HHHHHHHHHH----HHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehHhhh-HHHHHHHHHHH-HHHHHH
Confidence 3334444444 45555666666666666665543 24577889999999876333322 22222222111 111112
Q ss_pred HhchhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 000711 244 SYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRH 323 (1338)
Q Consensus 244 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~e~~~r~~~~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~ 323 (1338)
.|.+|...+++.+.+++..+.-.....+.-+..+...+.|.+.......+.++.+..+.. ++..+. ..++.|..--++
T Consensus 143 ayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~-r~R~~~-~h~~~~~~~a~~ 220 (546)
T COG4615 143 AYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLN-RERAEY-VHNNLYIPDAQE 220 (546)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheec-hHHHHH-HHhhhcCcchHH
Confidence 245777665554444333332222222233333444445555544445555565555543 333221 111222211111
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhHhcccccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000711 324 MRV-VLHDHWWFGMIQDFLLKYLGATVAVILI--IEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISS 400 (1338)
Q Consensus 324 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 400 (1338)
.++ ..+.+.+......+.+..+...++.+++ ..+.|.. +- .+..+. . .+.-+-.++.++....
T Consensus 221 ~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~w~s-------t~-~a~tiv-----l-vlLflr~pL~s~vgil 286 (546)
T COG4615 221 YRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLGWAS-------TN-VAATIV-----L-VLLFLRTPLLSAVGIL 286 (546)
T ss_pred HHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccch-------hh-HHHHHH-----H-HHHHHhhHHHHHHhhh
Confidence 111 1111111101111111112222232211 1122211 10 110011 1 1111224566666667
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCcCCCCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCC
Q 000711 401 RRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPN 480 (1338)
Q Consensus 401 ~~l~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~s 480 (1338)
..+..+..++++|.++-..++... .... ...++-..++++||.|.|++...-+..+|++|++||++.|+|.|
T Consensus 287 P~l~~AqvA~~kiakle~~~~~a~--~~~~------q~~p~~~~lelrnvrfay~~~~FhvgPiNl~ikrGelvFliG~N 358 (546)
T COG4615 287 PTLLTAQVAFNKIAKLELAPYKAD--FPRP------QAFPDWKTLELRNVRFAYQDNAFHVGPINLTIKRGELVFLIGGN 358 (546)
T ss_pred hHHHHHHHHHHHHHHhhcCCcccc--CCCC------CcCCcccceeeeeeeeccCcccceecceeeEEecCcEEEEECCC
Confidence 778888899999988754222111 0000 01112346999999999988777889999999999999999999
Q ss_pred CCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHH
Q 000711 481 GSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVEL 554 (1338)
Q Consensus 481 GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~ 554 (1338)
||||||++++|.|+|.|++|+|.+||.. +++|+-++-|+-|.|+|+.++ -+.. ..+.+.+...
T Consensus 359 GsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll-----~~e~------~as~q~i~~~ 427 (546)
T COG4615 359 GSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL-----GPEG------KASPQLIEKW 427 (546)
T ss_pred CCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh-----CCcc------CCChHHHHHH
Confidence 9999999999999999999999999964 345666777777888776433 2211 1455677777
Q ss_pred HHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHH----HHccCCeEEE
Q 000711 555 LKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAK----VRAMGTSCIT 630 (1338)
Q Consensus 555 l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~----l~~~~~t~i~ 630 (1338)
|+...+.+...-.. +.- ....||-|||+|+|+--|++-+-||+++||=-+--||.-++.+|+. +++.|+||+.
T Consensus 428 LqrLel~~ktsl~d-~~f--s~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~a 504 (546)
T COG4615 428 LQRLELAHKTSLND-GRF--SNLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFA 504 (546)
T ss_pred HHHHHHhhhhcccC-Ccc--cccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEE
Confidence 77776665433211 100 1247999999999999999999999999999999999999998885 4678999999
Q ss_pred EecChhhHhhcceEEEccCC
Q 000711 631 ISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 631 itH~~~~~~~~d~i~~l~~~ 650 (1338)
||||-....++||++.++++
T Consensus 505 IsHDd~YF~~ADrll~~~~G 524 (546)
T COG4615 505 ISHDDHYFIHADRLLEMRNG 524 (546)
T ss_pred EecCchhhhhHHHHHHHhcC
Confidence 99999999999999999874
No 265
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-35 Score=333.94 Aligned_cols=199 Identities=27% Similarity=0.350 Sum_probs=169.1
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEE
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIF 516 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~ 516 (1338)
..++++||++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++
T Consensus 10 ~~l~i~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 10 TTFALRNVSFRVP-GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred ceEEEeeEEEEEC-CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 4699999999996 4689999999999999999999999999999999999999999999999864 12346799
Q ss_pred EEecCCCCCC-CCHHHHhcCCCCCCc----ccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHH
Q 000711 517 YVPQRPYTAV-GTLRDQLIYPLTSDQ----EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 591 (1338)
Q Consensus 517 ~v~Q~~~l~~-~tl~eni~~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalAR 591 (1338)
|+||++.++. .|+.||+.++..... ......++++.++++.+++.+..++.+ .+||||||||++|||
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~lar 160 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV--------DSLSGGERQRAWIAM 160 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc--------ccCCHHHHHHHHHHH
Confidence 9999976654 599999987632110 001123456788999999988888766 689999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 592 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 592 al~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
|++.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..+|++++|+++
T Consensus 161 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G 224 (265)
T PRK10575 161 LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGG 224 (265)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999999998888754 389999999999987 579999999863
No 266
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=330.79 Aligned_cols=204 Identities=22% Similarity=0.283 Sum_probs=163.9
Q ss_pred ceEEeeeEEeCCCc---cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccC-----C
Q 000711 1099 SISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAG-----S 1170 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~---~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~-----l 1170 (1338)
-++++||++.|++. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++..... .
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 48999999999752 579999999999999999999999999999999999999999999999999876521 2
Q ss_pred -cccEEEEcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcc
Q 000711 1171 -GCGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1338)
Q Consensus 1171 -r~~i~~VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 1248 (1338)
+++++||||+|.+|++ |+++|+.++... .+.. .+..++.+.++++.+++.+..++.
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~gl~~~~~~~------ 142 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLI----------GKKK------PAEINSRALEMLAAVGLEHRANHR------ 142 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHh----------cCCC------HHHHHHHHHHHHHHcCCchhhhCC------
Confidence 2569999999999875 999999653100 0000 000123355667777764433222
Q ss_pred cCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCcccccceEEE
Q 000711 1249 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRL 1324 (1338)
Q Consensus 1249 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i~~~d~~l~l 1324 (1338)
..+||||||||++||||++++|++|||||||++||+++.+.+.+.+++ .|+|+|+|+|+++.+...|+++.|
T Consensus 143 ----~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l 218 (233)
T PRK11629 143 ----PSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEM 218 (233)
T ss_pred ----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEE
Confidence 346999999999999999999999999999999999999888776543 489999999999988888899999
Q ss_pred ecCC
Q 000711 1325 IDGE 1328 (1338)
Q Consensus 1325 ~~g~ 1328 (1338)
.+|+
T Consensus 219 ~~G~ 222 (233)
T PRK11629 219 RDGR 222 (233)
T ss_pred ECCE
Confidence 7653
No 267
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-36 Score=338.80 Aligned_cols=205 Identities=22% Similarity=0.305 Sum_probs=174.0
Q ss_pred CceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEE
Q 000711 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYV 1177 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~V 1177 (1338)
..|+|+||+..|. +..+++|+||+|++||.+.+.|||||||||++++|.||..|++|+|.+||.||..+...++.|++|
T Consensus 4 ~~l~i~~v~k~yg-~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig~V 82 (352)
T COG3842 4 PALEIRNVSKSFG-DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIGMV 82 (352)
T ss_pred ceEEEEeeeeecC-CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhccccee
Confidence 4799999999996 778999999999999999999999999999999999999999999999999999996555689999
Q ss_pred cCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCC
Q 000711 1178 PQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 1256 (1338)
Q Consensus 1178 pQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~L 1256 (1338)
+|+.-||+ -||++||.||...... ...+..+..+.++++.++|..+-++.| .+|
T Consensus 83 FQ~YALFPHltV~~NVafGLk~~~~---------------~~~~~i~~rv~e~L~lV~L~~~~~R~p----------~qL 137 (352)
T COG3842 83 FQSYALFPHMTVEENVAFGLKVRKK---------------LKKAEIKARVEEALELVGLEGFADRKP----------HQL 137 (352)
T ss_pred ecCcccCCCCcHHHHhhhhhhhcCC---------------CCHHHHHHHHHHHHHHcCchhhhhhCh----------hhh
Confidence 99999996 6999999998641000 000012345677888888877666654 579
Q ss_pred ChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHH----HHhcCCeEEEeccCC-CCcccccceEEEecCC
Q 000711 1257 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRL----AKDMGITFVTSSQRP-ALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1257 SgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~----~~~~~~TvI~IAHRl-~~i~~~d~~l~l~~g~ 1328 (1338)
|||||||+|+||||..+|++|+||||-||||....+.++.- .++.|.|.|.|+|.- +-+...|++.++.+|+
T Consensus 138 SGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 138 SGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGR 214 (352)
T ss_pred ChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCc
Confidence 99999999999999999999999999999999987766543 334699999999998 5889999999997664
No 268
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=337.71 Aligned_cols=199 Identities=23% Similarity=0.302 Sum_probs=169.2
Q ss_pred cEEEEeEEEEcCCC--CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------cccccE
Q 000711 444 YIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEI 515 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i 515 (1338)
.++++||++.|++. .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 58999999999742 4699999999999999999999999999999999999999999999998641 245679
Q ss_pred EEEecCCC--CCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000711 516 FYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1338)
Q Consensus 516 ~~v~Q~~~--l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1338)
+|+||+|. ++..|+.|||.++............+++.++++.+++.++.++.+ ..||||||||++|||||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~lAraL 155 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREP--------ARLSGGQKQRVAVAGII 155 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCCc--------ccCCHHHHHHHHHHHHH
Confidence 99999983 667899999987532111000111245678899999988877765 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 594 ~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
+.+|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+..+|++++|+++
T Consensus 156 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G 216 (277)
T PRK13642 156 ALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAG 216 (277)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECC
Confidence 999999999999999999999999988753 389999999999998889999999863
No 269
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.8e-35 Score=331.15 Aligned_cols=196 Identities=27% Similarity=0.392 Sum_probs=166.9
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc--------cccccEE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLNKEIF 516 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~--------~~~~~i~ 516 (1338)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++
T Consensus 2 l~~~~l~~~~~-~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 80 (240)
T PRK09493 2 IEFKNVSKHFG-PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAG 80 (240)
T ss_pred EEEEeEEEEEC-CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceE
Confidence 78999999986 46899999999999999999999999999999999999999999999998641 2345799
Q ss_pred EEecCCCCCC-CCHHHHhcCCCCC-CcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 517 YVPQRPYTAV-GTLRDQLIYPLTS-DQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 517 ~v~Q~~~l~~-~tl~eni~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
|+||++.++. .|++||+.++... ........++++.++++.+++++..++.+ ..||||||||++||||++
T Consensus 81 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrv~la~al~ 152 (240)
T PRK09493 81 MVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHHYP--------SELSGGQQQRVAIARALA 152 (240)
T ss_pred EEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhcCh--------hhcCHHHHHHHHHHHHHh
Confidence 9999998775 6999999875311 00001112346778899999988877765 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
++|++++|||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 153 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 211 (240)
T PRK09493 153 VKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDK 211 (240)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999988754 4899999999999885 6999999986
No 270
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.6e-35 Score=326.92 Aligned_cols=197 Identities=25% Similarity=0.433 Sum_probs=168.8
Q ss_pred EEEEeEEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc---------ccc
Q 000711 445 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLN 512 (1338)
Q Consensus 445 i~~~~v~~~~~~~---~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~ 512 (1338)
++++|+++.|+++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..+
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 6899999998642 6799999999999999999999999999999999999999999999998641 134
Q ss_pred ccEEEEecCCCCCC-CCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000711 513 KEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1338)
Q Consensus 513 ~~i~~v~Q~~~l~~-~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1338)
+.++|+||+|.++. .|+.||+.++....... .....+++.++++.+++.+..++.+ .+||||||||++||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~lS~G~~qrv~la 153 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYP--------HNLSGGQKQRVAIA 153 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcCh--------hhCCHHHHHHHHHH
Confidence 67999999998876 69999998753211100 0112346788999999988888876 68999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHhhcceEEEccC
Q 000711 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 591 Ral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~~~d~i~~l~~ 649 (1338)
||++.+|+++||||||++||+.+.+.+++.+++ .++|+|++||+++....||++++|++
T Consensus 154 ral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~ 216 (220)
T TIGR02982 154 RALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMED 216 (220)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEEC
Confidence 999999999999999999999999998888754 38999999999998889999999975
No 271
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-35 Score=330.98 Aligned_cols=206 Identities=21% Similarity=0.285 Sum_probs=163.9
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcC
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQ 1179 (1338)
|+++||++.|++ +++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++......+++++||||
T Consensus 3 l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q 81 (239)
T cd03296 3 IEVRNVSKRFGD-FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVFQ 81 (239)
T ss_pred EEEEeEEEEECC-EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEec
Confidence 789999999975 5799999999999999999999999999999999999999999999999988765444567999999
Q ss_pred CCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCCh
Q 000711 1180 RPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1338)
Q Consensus 1180 dP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 1258 (1338)
+|.+|. .|+++|+.++.... +..... .....++.+.++++.+++....++. ..+||+
T Consensus 82 ~~~~~~~~tv~e~l~~~~~~~----------~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 139 (239)
T cd03296 82 HYALFRHMTVFDNVAFGLRVK----------PRSERP--PEAEIRAKVHELLKLVQLDWLADRY----------PAQLSG 139 (239)
T ss_pred CCcccCCCCHHHHHhhhhhhc----------cccccC--CHHHHHHHHHHHHHHcCChhhhhcC----------hhhCCH
Confidence 999986 59999997642100 000000 0000123345666777664433322 346999
Q ss_pred hHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCC-cccccceEEEecCC
Q 000711 1259 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPAL-IPFHSLELRLIDGE 1328 (1338)
Q Consensus 1259 GQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~-i~~~d~~l~l~~g~ 1328 (1338)
|||||++|||||+++|++|||||||++||+++.+.+.+.+++ .|+|+|+|+|+++. ..++|+++.|.+|+
T Consensus 140 G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~ 214 (239)
T cd03296 140 GQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGR 214 (239)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 999999999999999999999999999999999888776643 38999999999985 56799999997654
No 272
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.9e-35 Score=326.97 Aligned_cols=202 Identities=21% Similarity=0.256 Sum_probs=161.9
Q ss_pred eEEeeeEEeCCCc---cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccC------C
Q 000711 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAG------S 1170 (1338)
Q Consensus 1100 I~f~nV~f~yp~~---~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~------l 1170 (1338)
|+++||++.|++. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++..... .
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 6899999999752 579999999999999999999999999999999999999999999999998876521 1
Q ss_pred cccEEEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCccc
Q 000711 1171 GCGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 1249 (1338)
Q Consensus 1171 r~~i~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 1249 (1338)
+.+++||||+|.+|. .|++||+.++... .+.. .....+.+.++++.+++.+...+.
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~~~~~------- 138 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLI----------GKKS------VKEAKERAYEMLEKVGLEHRINHR------- 138 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHh----------cCCC------HHHHHHHHHHHHHHcCChhhhhCC-------
Confidence 257999999999996 5999999653100 0000 000122345566666664433222
Q ss_pred CcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCcccccceEEEe
Q 000711 1250 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLI 1325 (1338)
Q Consensus 1250 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i~~~d~~l~l~ 1325 (1338)
...||||||||++||||++++|++|||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+..+|+++.|.
T Consensus 139 ---~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~ 215 (221)
T TIGR02211 139 ---PSELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMK 215 (221)
T ss_pred ---hhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEe
Confidence 346999999999999999999999999999999999999888776542 4899999999999888889999997
Q ss_pred cC
Q 000711 1326 DG 1327 (1338)
Q Consensus 1326 ~g 1327 (1338)
+|
T Consensus 216 ~G 217 (221)
T TIGR02211 216 DG 217 (221)
T ss_pred CC
Confidence 65
No 273
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.2e-35 Score=329.78 Aligned_cols=198 Identities=25% Similarity=0.340 Sum_probs=168.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-c------ccccEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-D------LNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-~------~~~~i~ 516 (1338)
.++++|+++.|++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .++.++
T Consensus 2 ~i~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (242)
T TIGR03411 2 ILYLEGLSVSFDG-FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIG 80 (242)
T ss_pred eEEEEeeEEEcCC-eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCee
Confidence 4789999999964 6799999999999999999999999999999999999999999999998641 1 234699
Q ss_pred EEecCCCCCCC-CHHHHhcCCCCCCcc--------cCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHH
Q 000711 517 YVPQRPYTAVG-TLRDQLIYPLTSDQE--------VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRL 587 (1338)
Q Consensus 517 ~v~Q~~~l~~~-tl~eni~~~~~~~~~--------~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRl 587 (1338)
|+||++.++.+ |++||+.++...... .....++++.++++.+++++..++.+ ..||||||||+
T Consensus 81 ~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~Ge~qrv 152 (242)
T TIGR03411 81 RKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA--------GLLSHGQKQWL 152 (242)
T ss_pred EeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHH
Confidence 99999988876 999999875321100 00112456788899999987776654 68999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 588 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 588 alARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
+||||++++|++++|||||++||+.+.+.+++.+++ .++|+|++||+++.+. .||++++++++
T Consensus 153 ~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g 218 (242)
T TIGR03411 153 EIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQG 218 (242)
T ss_pred HHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999998875 3689999999999885 69999999863
No 274
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=9.5e-36 Score=294.93 Aligned_cols=204 Identities=18% Similarity=0.233 Sum_probs=168.0
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcC
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQ 1179 (1338)
|.+++|.|.|...+. .+++.|++||+|||+||||||||||++++.||..|.+|+|.|+|+|.....-.++-++++.|
T Consensus 2 l~L~~V~~~y~~~~~---~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSmlFQ 78 (231)
T COG3840 2 LALDDVRFSYGHLPM---RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSMLFQ 78 (231)
T ss_pred ccccceEEeeCcceE---EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhhhh
Confidence 457889998865543 56889999999999999999999999999999999999999999999887555557999999
Q ss_pred CCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCCh
Q 000711 1180 RPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1338)
Q Consensus 1180 dP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 1258 (1338)
|--||. -|+++|+..+.... +| +.....+.+..++..+||..+.+++| .+|||
T Consensus 79 EnNLFaHLtV~qNigLGl~P~------Lk----------L~a~~r~~v~~aa~~vGl~~~~~RLP----------~~LSG 132 (231)
T COG3840 79 ENNLFAHLTVAQNIGLGLSPG------LK----------LNAEQREKVEAAAAQVGLAGFLKRLP----------GELSG 132 (231)
T ss_pred ccccchhhhhhhhhcccCCcc------cc----------cCHHHHHHHHHHHHHhChhhHhhhCc----------cccCc
Confidence 999996 59999998754310 00 00011234566778899988888876 46999
Q ss_pred hHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHH----HHHHhcCCeEEEeccCCC-CcccccceEEEecCCCCeE
Q 000711 1259 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLY----RLAKDMGITFVTSSQRPA-LIPFHSLELRLIDGEGNWE 1332 (1338)
Q Consensus 1259 GQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~----~~~~~~~~TvI~IAHRl~-~i~~~d~~l~l~~g~g~~~ 1332 (1338)
|||||+|+||+++|+-+||+||||-||||+.....+. +++.+++.|+++|+|.++ ..+..++++.+++|.=.|.
T Consensus 133 GqRQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~ 211 (231)
T COG3840 133 GQRQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQ 211 (231)
T ss_pred hHHHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEee
Confidence 9999999999999999999999999999999866543 455678999999999995 7888999999988876663
No 275
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.4e-35 Score=327.19 Aligned_cols=203 Identities=23% Similarity=0.278 Sum_probs=163.4
Q ss_pred eEEeeeEEeCCCc---cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc-cCCcccEE
Q 000711 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIF 1175 (1338)
Q Consensus 1100 I~f~nV~f~yp~~---~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~-~~lr~~i~ 1175 (1338)
|+++||++.|++. +++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.++|.++... ...+++++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 6899999999753 2799999999999999999999999999999999999999999999999988653 23356799
Q ss_pred EEcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccC
Q 000711 1176 YVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1338)
Q Consensus 1176 ~VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 1254 (1338)
|+||+|.+|.+ |++||+.++... .+.. ....+..+.++++.+++.+..++. ..
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~~~~~----------~~ 135 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGL----------YGLK------GDELTARLEELADRLGMEELLDRR----------VG 135 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHcCCHHHHhhh----------hh
Confidence 99999999985 999999642110 0000 000123455667777775443332 34
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCC-cccccceEEEecCC
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPAL-IPFHSLELRLIDGE 1328 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~-i~~~d~~l~l~~g~ 1328 (1338)
.||||||||++||||++++|++|||||||++||..+.+.+.+.+++ .++|+|+|+|+++. .+++|+++.|.+|+
T Consensus 136 ~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 213 (218)
T cd03266 136 GFSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGR 213 (218)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 6999999999999999999999999999999999999888776643 48999999999975 56799999997663
No 276
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-35 Score=332.33 Aligned_cols=211 Identities=26% Similarity=0.295 Sum_probs=165.1
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-----CCcccE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 1174 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~-----~lr~~i 1174 (1338)
|+++||+++|++.+++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.... ..+.++
T Consensus 1 l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 80 (241)
T cd03256 1 IEVENLSKTYPNGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQI 80 (241)
T ss_pred CEEeeEEEecCCccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhcc
Confidence 578999999975467999999999999999999999999999999999999999999999999887542 234579
Q ss_pred EEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCccc
Q 000711 1175 FYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1338)
Q Consensus 1175 ~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 1253 (1338)
+||||+|.+|. .|+++|+.++......... ...+. .....++.+.++++.+++.....+ ..
T Consensus 81 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~l~~~~l~~~~~~----------~~ 142 (241)
T cd03256 81 GMIFQQFNLIERLSVLENVLSGRLGRRSTWR--SLFGL------FPKEEKQRALAALERVGLLDKAYQ----------RA 142 (241)
T ss_pred EEEcccCcccccCcHHHHHHhhhcccchhhh--hhccc------CcHHHHHHHHHHHHHcCChhhhCC----------Cc
Confidence 99999999887 6999999754311000000 00000 001113345667777776433322 23
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCcc-cccceEEEecCC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIP-FHSLELRLIDGE 1328 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i~-~~d~~l~l~~g~ 1328 (1338)
.+||||||||++||||++++|++||||||||+||+.+.+.+.+.+++ .|+|+|+|+|+++.+. ++|++++|.+|+
T Consensus 143 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~ 222 (241)
T cd03256 143 DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGR 222 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 57999999999999999999999999999999999999888776543 3899999999998776 899999997764
No 277
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-35 Score=332.81 Aligned_cols=199 Identities=21% Similarity=0.233 Sum_probs=166.1
Q ss_pred CCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC-----CCccEEEeCCCCc-------
Q 000711 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS------- 509 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~------- 509 (1338)
.+.++++|+++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 11 ~~~l~~~~l~~~~~~-~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~ 89 (260)
T PRK10744 11 PSKIQVRNLNFYYGK-FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDI 89 (260)
T ss_pred CceEEEEEEEEEeCC-eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccch
Confidence 467999999999964 579999999999999999999999999999999999986 5899999998541
Q ss_pred -cccccEEEEecCCCCCCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCch----HHhcCCCCccccCCCCCChhH
Q 000711 510 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGE 583 (1338)
Q Consensus 510 -~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGq 583 (1338)
.++++++|+||+|.++..|++||+.++....... ....++++.++++.+++.+ ..++. ..+|||||
T Consensus 90 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LS~Gq 161 (260)
T PRK10744 90 ALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQS--------GYSLSGGQ 161 (260)
T ss_pred HHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcC--------CCCCCHHH
Confidence 2356799999999988899999998753211000 0112356778899998753 33332 36899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 584 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 584 kQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
|||++|||||+.+|+++||||||++||+.+++.+.+.+++ .++|+|++||+++.+ ..+|++++|++
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 230 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYL 230 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999998875 378999999999987 47999999986
No 278
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-35 Score=325.67 Aligned_cols=194 Identities=21% Similarity=0.317 Sum_probs=165.5
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----cccccEEEEec
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 520 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~Q 520 (1338)
++++||++.|++ .+ .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+||
T Consensus 2 l~~~~l~~~~~~-~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 78 (232)
T PRK10771 2 LKLTDITWLYHH-LP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSMLFQ 78 (232)
T ss_pred eEEEEEEEEECC-cc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEEec
Confidence 789999999963 33 399999999999999999999999999999999999999999998651 12357999999
Q ss_pred CCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000711 521 RPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1338)
Q Consensus 521 ~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1338)
++.++.+ |++||+.++...........++++.++++.+++++..++.+ ..||||||||++||||++++|++
T Consensus 79 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~~p~l 150 (232)
T PRK10771 79 ENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP--------GQLSGGQRQRVALARCLVREQPI 150 (232)
T ss_pred ccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc--------ccCCHHHHHHHHHHHHHhcCCCE
Confidence 9988875 99999987632110011123456889999999998888877 68999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 600 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 600 llLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
+||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 151 llLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 205 (232)
T PRK10771 151 LLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVAD 205 (232)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999999999999888754 3789999999999875 6999999986
No 279
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=330.63 Aligned_cols=197 Identities=25% Similarity=0.359 Sum_probs=166.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------------cc
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------------DL 511 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------------~~ 511 (1338)
.++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..
T Consensus 2 ~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (242)
T PRK11124 2 SIQLNGINCFYG-AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIREL 80 (242)
T ss_pred EEEEEeeEEEEC-CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHH
Confidence 378999999996 46899999999999999999999999999999999999999999999998641 12
Q ss_pred cccEEEEecCCCCCCC-CHHHHhcCCC-CCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHH
Q 000711 512 NKEIFYVPQRPYTAVG-TLRDQLIYPL-TSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1338)
Q Consensus 512 ~~~i~~v~Q~~~l~~~-tl~eni~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1338)
++.++|+||+|.++.+ |++||+.+.. ...........+++.++++.++++++.++.+ .+||||||||++|
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrv~l 152 (242)
T PRK11124 81 RRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRFP--------LHLSGGQQQRVAI 152 (242)
T ss_pred HhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHH
Confidence 4579999999988764 9999997421 1000000112345778899999988888766 6899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 590 ARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|||++.+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 153 aral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~ 216 (242)
T PRK11124 153 ARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMEN 216 (242)
T ss_pred HHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999999999988764 4899999999999885 6999999986
No 280
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=337.25 Aligned_cols=204 Identities=20% Similarity=0.292 Sum_probs=166.7
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEE
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFY 1176 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~ 1176 (1338)
-|+++||++.|++..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++... ..++.+++|
T Consensus 4 ~l~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 83 (274)
T PRK13647 4 IIEVEDLHFRYKDGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGL 83 (274)
T ss_pred eEEEEEEEEEeCCCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEE
Confidence 489999999998666799999999999999999999999999999999999999999999999988754 233457999
Q ss_pred EcCCC--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccC
Q 000711 1177 VPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1338)
Q Consensus 1177 VpQdP--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 1254 (1338)
|||+| .+|..|+++|+.++... .+.. ....+..+.++++.++|....++.+ .
T Consensus 84 v~q~~~~~~~~~tv~e~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~L~~~~~~~~----------~ 137 (274)
T PRK13647 84 VFQDPDDQVFSSTVWDDVAFGPVN----------MGLD------KDEVERRVEEALKAVRMWDFRDKPP----------Y 137 (274)
T ss_pred EecChhhhhccCcHHHHHHhhHHH----------cCCC------HHHHHHHHHHHHHHCCCHHHhcCCh----------h
Confidence 99999 67889999999764210 0000 0001233556677777754443332 4
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
.||||||||++|||||+++|++|||||||++||+.+.+.+.+++++ .|+|+|+|+|+++.+ +++|+++.|.+|+
T Consensus 138 ~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~ 215 (274)
T PRK13647 138 HLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGR 215 (274)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999887776543 489999999999876 7899999997765
No 281
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.8e-35 Score=333.37 Aligned_cols=198 Identities=25% Similarity=0.344 Sum_probs=166.1
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc--------------
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------------- 509 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------------- 509 (1338)
.++++||++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (250)
T PRK11264 3 AIEVKNLVKKFH-GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIR 81 (250)
T ss_pred cEEEeceEEEEC-CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHH
Confidence 489999999996 45799999999999999999999999999999999999999999999988531
Q ss_pred cccccEEEEecCCCCCC-CCHHHHhcCCCCC-CcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHH
Q 000711 510 DLNKEIFYVPQRPYTAV-GTLRDQLIYPLTS-DQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRL 587 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~~l~~-~tl~eni~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRl 587 (1338)
.+++.++|+||++.++. .|++||+.++... .........+++.++++.+++.+..++.+ .+||||||||+
T Consensus 82 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~Gq~qrv 153 (250)
T PRK11264 82 QLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYP--------RRLSGGQQQRV 153 (250)
T ss_pred HhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhCCh--------hhCChHHHHHH
Confidence 13457999999998775 6999999864210 00001112345678889999987766654 68999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 588 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 588 alARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
+||||++.+|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .||++++|+++
T Consensus 154 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G 220 (250)
T PRK11264 154 AIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQG 220 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECC
Confidence 999999999999999999999999999999987764 4899999999999875 69999999863
No 282
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=346.13 Aligned_cols=204 Identities=21% Similarity=0.271 Sum_probs=168.6
Q ss_pred CceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEE
Q 000711 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYV 1177 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~V 1177 (1338)
..|+++||++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++......+++|+||
T Consensus 5 ~~l~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v 83 (351)
T PRK11432 5 NFVVLKNITKRFGS-NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICMV 83 (351)
T ss_pred cEEEEEeEEEEECC-eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 46999999999964 66999999999999999999999999999999999999999999999999998765445679999
Q ss_pred cCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCC
Q 000711 1178 PQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 1256 (1338)
Q Consensus 1178 pQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~L 1256 (1338)
+|+|.||+. |++|||.|+.... +. .....++.+.++++.+++.++.++. ...|
T Consensus 84 fQ~~~lfp~~tv~eNi~~~l~~~----------~~------~~~~~~~~v~~~l~~~gl~~~~~r~----------~~~L 137 (351)
T PRK11432 84 FQSYALFPHMSLGENVGYGLKML----------GV------PKEERKQRVKEALELVDLAGFEDRY----------VDQI 137 (351)
T ss_pred eCCcccCCCCCHHHHHHHHHhHc----------CC------CHHHHHHHHHHHHHHcCCchhhcCC----------hhhC
Confidence 999999975 9999998763200 00 0000123456677777776554443 3569
Q ss_pred ChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHH----hcCCeEEEeccCCCC-cccccceEEEecCC
Q 000711 1257 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPAL-IPFHSLELRLIDGE 1328 (1338)
Q Consensus 1257 SgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~----~~~~TvI~IAHRl~~-i~~~d~~l~l~~g~ 1328 (1338)
|||||||+||||||+++|++|+||||||+||..+.+.+.+.++ +.|+|+|.|+|..+. ..++|++++|.+|+
T Consensus 138 SgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~ 214 (351)
T PRK11432 138 SGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGK 214 (351)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999988776553 348999999999974 58899999997664
No 283
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-35 Score=296.72 Aligned_cols=205 Identities=21% Similarity=0.246 Sum_probs=172.0
Q ss_pred cEEEEeEEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-ccccccEEEEecC
Q 000711 444 YIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQR 521 (1338)
Q Consensus 444 ~i~~~~v~~~~~~-~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-~~~~~~i~~v~Q~ 521 (1338)
.+..++++..|++ .+.+++|+|++|.+||.+.++||||||||||+++++|+.+|..|+|.++|.. ..-...-|.|+|+
T Consensus 3 ~l~~~~~sl~y~g~~~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPgaergvVFQ~ 82 (259)
T COG4525 3 MLNVSHLSLSYEGKPRSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGAERGVVFQN 82 (259)
T ss_pred eeehhheEEecCCcchhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCccceeEecc
Confidence 3567788888864 2459999999999999999999999999999999999999999999999863 1112346999999
Q ss_pred CCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000711 522 PYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFA 600 (1338)
Q Consensus 522 ~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~il 600 (1338)
+-+++ .|+.||+.|+.......+....+...+.+..+||+++-++++ -+||||||||+.|||||..+|++|
T Consensus 83 ~~LlPWl~~~dNvafgL~l~Gi~k~~R~~~a~q~l~~VgL~~~~~~~i--------~qLSGGmrQRvGiARALa~eP~~L 154 (259)
T COG4525 83 EALLPWLNVIDNVAFGLQLRGIEKAQRREIAHQMLALVGLEGAEHKYI--------WQLSGGMRQRVGIARALAVEPQLL 154 (259)
T ss_pred CccchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCcccccccce--------EeecchHHHHHHHHHHhhcCcceE
Confidence 87655 699999999876543323334456678899999998887776 589999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHH----ccCCeEEEEecChhhHh-hcceEEEccCCCceEEe
Q 000711 601 ILDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPALVA-FHDVVLSLDGEGEWRVH 656 (1338)
Q Consensus 601 lLDEpts~LD~~~~~~i~~~l~----~~~~t~i~itH~~~~~~-~~d~i~~l~~~g~~~~~ 656 (1338)
+||||++|||.-+++++++.|- +.|+.+++|||+.+..- .++++++|+++.+..++
T Consensus 155 lLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lliTH~ieEAlflatrLvvlsp~pgRvv~ 215 (259)
T COG4525 155 LLDEPFGALDALTREQMQELLLDLWQETGKQVLLITHDIEEALFLATRLVVLSPGPGRVVE 215 (259)
T ss_pred eecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhhheeEEecCCCceeeE
Confidence 9999999999999999988774 45999999999998754 68999999986555544
No 284
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2.2e-35 Score=342.32 Aligned_cols=199 Identities=29% Similarity=0.383 Sum_probs=166.5
Q ss_pred CcEEEEeEEEEcCC------------CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-
Q 000711 443 NYIEFSGVKVVTPT------------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS- 509 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~------------~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~- 509 (1338)
..++++||++.|+. ..++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+.
T Consensus 7 ~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~ 86 (331)
T PRK15079 7 VLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLL 86 (331)
T ss_pred ceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECC
Confidence 46899999998863 24699999999999999999999999999999999999999999999999651
Q ss_pred --------cccccEEEEecCC--CCC-CCCHHHHhcCCCCCC--cccCCCCHHHHHHHHHHcCCc-hHHhcCCCCccccC
Q 000711 510 --------DLNKEIFYVPQRP--YTA-VGTLRDQLIYPLTSD--QEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINW 575 (1338)
Q Consensus 510 --------~~~~~i~~v~Q~~--~l~-~~tl~eni~~~~~~~--~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~ 575 (1338)
.++++++||+|+| .++ ..|+.|||.++.... ........+.+.++++.+++. +..++.|
T Consensus 87 ~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p------- 159 (331)
T PRK15079 87 GMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYP------- 159 (331)
T ss_pred cCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCc-------
Confidence 1356899999998 354 579999997643210 000111234567889999994 5667766
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 576 GDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 576 g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
.+||||||||++|||||+.+|+++|+||||++||+.++..+.+.+++ .|.|+|+|||+++.+. .||+|++|.+
T Consensus 160 -~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 160 -HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 68999999999999999999999999999999999999999887754 3899999999999986 6999999986
No 285
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=346.92 Aligned_cols=185 Identities=26% Similarity=0.333 Sum_probs=157.9
Q ss_pred CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------c----ccccEEEEecCCCCCC-
Q 000711 458 NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D----LNKEIFYVPQRPYTAV- 526 (1338)
Q Consensus 458 ~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~----~~~~i~~v~Q~~~l~~- 526 (1338)
.++|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. . .+++++|+||++.++.
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~ 120 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPH 120 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCC
Confidence 3589999999999999999999999999999999999999999999998641 1 1357999999998876
Q ss_pred CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCC
Q 000711 527 GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECT 606 (1338)
Q Consensus 527 ~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpt 606 (1338)
.|++||+.++...........++++.++++.+++.++.++.| .+||||||||++|||||+++|+++||||||
T Consensus 121 ~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~--------~~LSgGq~QRv~LArAL~~~P~iLLLDEPt 192 (400)
T PRK10070 121 MTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP--------DELSGGMRQRVGLARALAINPDILLMDEAF 192 (400)
T ss_pred CCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc--------ccCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 599999998642111001112356788999999998888877 689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 607 SAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 607 s~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
++||+.+.+.+++.+++ .|+|+|++||+++.+ +.+|++++|+++
T Consensus 193 s~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G 241 (400)
T PRK10070 193 SALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNG 241 (400)
T ss_pred ccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECC
Confidence 99999999999988753 489999999999876 579999999863
No 286
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.3e-35 Score=324.83 Aligned_cols=198 Identities=24% Similarity=0.261 Sum_probs=162.6
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcC
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQ 1179 (1338)
|+++||++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.++|.++......+++++||||
T Consensus 1 l~~~~l~~~~~~-~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 79 (208)
T cd03268 1 LKTNDLTKTYGK-KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALIE 79 (208)
T ss_pred CEEEEEEEEECC-eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEecC
Confidence 578999999864 5799999999999999999999999999999999999999999999999988654333457999999
Q ss_pred CCCCC-CCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCCh
Q 000711 1180 RPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1338)
Q Consensus 1180 dP~LF-~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 1258 (1338)
+|.+| ..|++||+.++... .+ ..+..+.++++.+++....++. ...|||
T Consensus 80 ~~~~~~~~tv~e~l~~~~~~----------~~----------~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 129 (208)
T cd03268 80 APGFYPNLTARENLRLLARL----------LG----------IRKKRIDEVLDVVGLKDSAKKK----------VKGFSL 129 (208)
T ss_pred CCccCccCcHHHHHHHHHHh----------cC----------CcHHHHHHHHHHcCCHHHHhhh----------HhhCCH
Confidence 99888 57999999653110 00 0123455666777775444332 246999
Q ss_pred hHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1259 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1259 GQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
|||||++||||++++|+++||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+ .++|+++.|.+|+
T Consensus 130 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~ 203 (208)
T cd03268 130 GMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGK 203 (208)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999888776643 489999999999866 6799999997653
No 287
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-35 Score=332.29 Aligned_cols=199 Identities=23% Similarity=0.257 Sum_probs=165.5
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCCc--------
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-------- 509 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~-------- 509 (1338)
..++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 6 ~~l~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 6 AIIETENLNLFYT-DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred ceEEEeeeEEEeC-CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 4799999999986 46799999999999999999999999999999999999997 599999998541
Q ss_pred cccccEEEEecCCCCCCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCch----HHhcCCCCccccCCCCCChhHH
Q 000711 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 584 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGqk 584 (1338)
..++.++|+||++.++..|++||+.++....... ....++++.++++.+++.+ ..++. ..+||||||
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--------~~~LSgG~~ 156 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--------ALSLSGGQQ 156 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCC--------cccCCHHHH
Confidence 2356799999999988899999998763211100 0112356778888888743 23332 368999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 585 QRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
||++|||||+.+|+++||||||++||+.+...+++.+++ .++|+|++||+++.+ ..+|++++|+++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G 225 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNG 225 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999998865 378999999999986 569999999863
No 288
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.9e-35 Score=340.71 Aligned_cols=197 Identities=22% Similarity=0.329 Sum_probs=168.3
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-----cccccEEEEe
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-----DLNKEIFYVP 519 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-----~~~~~i~~v~ 519 (1338)
++++|+++.|+ ++.+|+|+||++++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. ..++.++|+|
T Consensus 3 l~~~~l~~~~~-~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig~~~ 81 (301)
T TIGR03522 3 IRVSSLTKLYG-TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIGYLP 81 (301)
T ss_pred EEEEEEEEEEC-CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceEEec
Confidence 78999999996 46799999999999999999999999999999999999999999999999641 2356799999
Q ss_pred cCCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000711 520 QRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1338)
Q Consensus 520 Q~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1338)
|+|.++.. |+.||+.+.............+++.++++.+++.+..++.+ ..||||||||++|||||+++|+
T Consensus 82 q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrv~la~al~~~p~ 153 (301)
T TIGR03522 82 EHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQHKKI--------GQLSKGYRQRVGLAQALIHDPK 153 (301)
T ss_pred CCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhcCch--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 99988865 99999976422110000112356788999999998877755 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHcc--CCeEEEEecChhhHh-hcceEEEccCC
Q 000711 599 FAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 599 illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
++||||||++||+.+.+.+++.+++. ++|+|++||+++.+. .||++++|+++
T Consensus 154 lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G 208 (301)
T TIGR03522 154 VLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKG 208 (301)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999988753 799999999999765 69999999863
No 289
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=337.73 Aligned_cols=204 Identities=25% Similarity=0.327 Sum_probs=165.9
Q ss_pred ceEEeeeEEeCCC--ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccE
Q 000711 1099 SISFSKLDIITPS--QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGI 1174 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~--~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i 1174 (1338)
.|+++||++.|++ .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++... ...++++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 4899999999974 35699999999999999999999999999999999999999999999999998754 2345579
Q ss_pred EEEcCCCC--CCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcc
Q 000711 1175 FYVPQRPY--TCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 1252 (1338)
Q Consensus 1175 ~~VpQdP~--LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~ 1252 (1338)
+||||+|. ++..|+++||.++... .+. .++..+..+.++++.++|.+..++.
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~----------~~~------~~~~~~~~~~~~l~~~gL~~~~~~~---------- 137 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLEN----------KGI------PHEEMKERVNEALELVGMQDFKERE---------- 137 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHh----------CCC------CHHHHHHHHHHHHHHCCCHhHhhCC----------
Confidence 99999993 5677999999764210 000 0000123456677777776544433
Q ss_pred cCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1253 EDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1253 g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
..+||||||||++||||++++|++|||||||++||+.+.+.+.+.+++ .|+|+|+|+|+++.+.++|++++|.+|+
T Consensus 138 ~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~ 217 (279)
T PRK13650 138 PARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQ 217 (279)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 247999999999999999999999999999999999999887776532 3899999999998888999999997664
No 290
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=3.1e-35 Score=332.47 Aligned_cols=199 Identities=21% Similarity=0.263 Sum_probs=167.8
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-------------
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------------- 509 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------------- 509 (1338)
+.++++||++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 4 ~~l~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 82 (257)
T PRK10619 4 NKLNVIDLHKRYG-EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVA 82 (257)
T ss_pred ccEEEeeeEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccccc
Confidence 5699999999996 46899999999999999999999999999999999999999999999998531
Q ss_pred ------cccccEEEEecCCCCCC-CCHHHHhcCCCC-CCcccCCCCHHHHHHHHHHcCCchHH-hcCCCCccccCCCCCC
Q 000711 510 ------DLNKEIFYVPQRPYTAV-GTLRDQLIYPLT-SDQEVEPLTHGGMVELLKNVDLEYLL-DRYPPEKEINWGDELS 580 (1338)
Q Consensus 510 ------~~~~~i~~v~Q~~~l~~-~tl~eni~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~~g~~LS 580 (1338)
..++.++|+||++.++. .|++||+.++.. .........++++.++++.+++.+.. ++.+ .+||
T Consensus 83 ~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~--------~~LS 154 (257)
T PRK10619 83 DKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYP--------VHLS 154 (257)
T ss_pred cchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCc--------ccCC
Confidence 12457999999998886 599999986421 00000111245677889999998764 4443 6899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 581 LGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 581 gGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
||||||++|||||+++|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .||++++++++
T Consensus 155 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G 228 (257)
T PRK10619 155 GGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQG 228 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECC
Confidence 9999999999999999999999999999999999999988764 4899999999999887 59999999863
No 291
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.6e-35 Score=325.47 Aligned_cols=200 Identities=28% Similarity=0.412 Sum_probs=158.7
Q ss_pred EEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcCC
Q 000711 1101 SFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQR 1180 (1338)
Q Consensus 1101 ~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQd 1180 (1338)
+++||++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.. .+.+++||||+
T Consensus 1 ~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~---~~~~i~~v~q~ 76 (213)
T cd03235 1 EVEDLTVSYGG-HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEK---ERKRIGYVPQR 76 (213)
T ss_pred CcccceeEECC-EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHH---HHhheEEeccc
Confidence 36899998865 569999999999999999999999999999999999999999999999988752 34579999999
Q ss_pred CCC---CCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1181 PYT---CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1181 P~L---F~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
|.+ |..|++||+.++...... ..+ ......++.+.++++.+++....++. ..+||
T Consensus 77 ~~~~~~~~~tv~e~l~~~~~~~~~------~~~------~~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS 134 (213)
T cd03235 77 RSIDRDFPISVRDVVLMGLYGHKG------LFR------RLSKADKAKVDEALERVGLSELADRQ----------IGELS 134 (213)
T ss_pred cccccCCCCcHHHHHHhccccccc------ccc------CCCHHHHHHHHHHHHHcCCHHHHhCC----------cccCC
Confidence 987 568999999764321000 000 00000123456677777775443322 34799
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEEec
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLID 1326 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l~~ 1326 (1338)
||||||++||||++++|++|||||||++||+++.+.+.+.+++ .++|+|+|+|+++.+ +++|+++.|.+
T Consensus 135 gG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~ 207 (213)
T cd03235 135 GGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNR 207 (213)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcC
Confidence 9999999999999999999999999999999999887776543 489999999999866 67899999954
No 292
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2.8e-35 Score=331.95 Aligned_cols=197 Identities=27% Similarity=0.349 Sum_probs=167.1
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc---------------
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------------- 509 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~--------------- 509 (1338)
|+++||++.|+ ++++++|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+.
T Consensus 1 i~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ 79 (252)
T TIGR03005 1 VRFSDVTKRFG-ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADE 79 (252)
T ss_pred CEEEEEEEEeC-CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccch
Confidence 47899999996 46899999999999999999999999999999999999999999999998541
Q ss_pred ----cccccEEEEecCCCCCC-CCHHHHhcCCCCCC-cccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhH
Q 000711 510 ----DLNKEIFYVPQRPYTAV-GTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGE 583 (1338)
Q Consensus 510 ----~~~~~i~~v~Q~~~l~~-~tl~eni~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGq 583 (1338)
.+++.++|++|++.++. .|+.||+.++.... .......++++.++++.+++.+..++.+ .+|||||
T Consensus 80 ~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~ 151 (252)
T TIGR03005 80 KHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHMP--------AQLSGGQ 151 (252)
T ss_pred hHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcCh--------hhcCHHH
Confidence 12467999999998775 79999998742110 0001112356788999999988887766 6899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 584 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 584 kQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
|||++|||||+++|+++||||||++||+.++..+++.+++ .|+|+|++||+++.+ ..+|++++|+++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G 223 (252)
T TIGR03005 152 QQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKG 223 (252)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECC
Confidence 9999999999999999999999999999999999888764 389999999999987 579999999863
No 293
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-35 Score=332.28 Aligned_cols=203 Identities=21% Similarity=0.239 Sum_probs=165.5
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC-----CCccEEEeCCCCc--------
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS-------- 509 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~-------- 509 (1338)
..|+++||++.|+ ++++|+|+||+|++||+++|+||||||||||+|+|+|+++ |++|+|.++|.+.
T Consensus 5 ~~l~~~~l~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 5 PKMEARGLSFFYG-DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred cEEEEeeeEEEEC-CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 4699999999996 4679999999999999999999999999999999999974 6899999998641
Q ss_pred cccccEEEEecCCCCCCCCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHH
Q 000711 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1338)
.+++.++|+||++.++..|++||+.++...... ......+++.++++.+++.+.+.... .....+||||||||++
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----~~~~~~LSgGq~qrv~ 159 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRL----HESALGLSGGQQQRLC 159 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHh----hCCcccCCHHHHHHHH
Confidence 234679999999988888999999875321100 00112456778899999864322110 0113689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 589 lARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
|||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+ ..+|++++|+++
T Consensus 160 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G 224 (253)
T PRK14242 160 IARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMG 224 (253)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999998875 378999999999987 579999999863
No 294
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.7e-35 Score=327.15 Aligned_cols=203 Identities=18% Similarity=0.238 Sum_probs=162.5
Q ss_pred eEEeeeEEeCCCc-cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc-cCCcccEEEE
Q 000711 1100 ISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYV 1177 (1338)
Q Consensus 1100 I~f~nV~f~yp~~-~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~-~~lr~~i~~V 1177 (1338)
|+++||++.|++. +++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++... ...+.+++||
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v 80 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYC 80 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEe
Confidence 5789999999753 6799999999999999999999999999999999999999999999999988653 2334579999
Q ss_pred cCCCCCC-CCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCC
Q 000711 1178 PQRPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 1256 (1338)
Q Consensus 1178 pQdP~LF-~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~L 1256 (1338)
||+|.+| ..|+++|+.++... .+.. .....+.+.++++.++|....+. . ..+|
T Consensus 81 ~q~~~~~~~~tv~~~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~~~~-------~---~~~L 134 (220)
T cd03263 81 PQFDALFDELTVREHLRFYARL----------KGLP------KSEIKEEVELLLRVLGLTDKANK-------R---ARTL 134 (220)
T ss_pred cCcCCccccCCHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHcCCHHHHhC-------h---hhhC
Confidence 9999998 57999999653100 0000 00012234566676666433222 1 2469
Q ss_pred ChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1257 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1257 SgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
|+|||||++||||++++|+++||||||++||+.+.+.+.+.+++ .++|+|+++|+++.+ +++|+++.|.+|+
T Consensus 135 S~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 135 SGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 99999999999999999999999999999999999888777653 368999999999866 5799999997664
No 295
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=337.93 Aligned_cols=203 Identities=22% Similarity=0.243 Sum_probs=163.5
Q ss_pred eEEeeeEEeCCCc----cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc----CCc
Q 000711 1100 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA----GSG 1171 (1338)
Q Consensus 1100 I~f~nV~f~yp~~----~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~----~lr 1171 (1338)
|+++||++.|++. +++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.... ..+
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 7899999999752 47999999999999999999999999999999999999999999999999987532 335
Q ss_pred ccEEEEcCCC--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCch--hhhhhhcccCc
Q 000711 1172 CGIFYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS--YLLEREEVGWD 1247 (1338)
Q Consensus 1172 ~~i~~VpQdP--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~--~~i~~~~~Gld 1247 (1338)
.+++||||+| .+|..|+++||.++... .+.. ++...+.+.++++.++|. ++.++
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~gL~~~~~~~~------ 140 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPIN----------LGLS------EEEIENRVKRAMNIVGLDYEDYKDK------ 140 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHH----------CCCC------HHHHHHHHHHHHHHcCCCchhhccC------
Confidence 6899999999 57889999999753110 0000 000122345667777763 22211
Q ss_pred ccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceE
Q 000711 1248 ANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLEL 1322 (1338)
Q Consensus 1248 t~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l 1322 (1338)
....||||||||++|||||+.+|++|||||||++||+.+...+.+++++ .|+|||+|+|+++.+ .++|+++
T Consensus 141 ----~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 141 ----SPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred ----CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEE
Confidence 2357999999999999999999999999999999999999888776543 389999999999865 7899999
Q ss_pred EEecCC
Q 000711 1323 RLIDGE 1328 (1338)
Q Consensus 1323 ~l~~g~ 1328 (1338)
.|.+|+
T Consensus 217 ~l~~G~ 222 (287)
T PRK13637 217 VMNKGK 222 (287)
T ss_pred EEECCE
Confidence 997765
No 296
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.4e-35 Score=324.26 Aligned_cols=202 Identities=20% Similarity=0.287 Sum_probs=161.8
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcC
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQ 1179 (1338)
|+++||+++|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++......+.+++|+||
T Consensus 1 i~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~q 79 (213)
T cd03301 1 VELENVTKRFGN-VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVFQ 79 (213)
T ss_pred CEEEeeEEEECC-eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEec
Confidence 578999999865 5799999999999999999999999999999999999999999999999988765434457999999
Q ss_pred CCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCCh
Q 000711 1180 RPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1338)
Q Consensus 1180 dP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 1258 (1338)
+|.+|. .|+++|+.++... .+. ..+..++.+.++++.+++....+.. ...|||
T Consensus 80 ~~~~~~~~tv~~~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 133 (213)
T cd03301 80 NYALYPHMTVYDNIAFGLKL----------RKV------PKDEIDERVREVAELLQIEHLLDRK----------PKQLSG 133 (213)
T ss_pred ChhhccCCCHHHHHHHHHHh----------cCC------CHHHHHHHHHHHHHHcCCHHHHhCC----------hhhCCH
Confidence 999985 6999999754110 000 0000122345566666664433322 246999
Q ss_pred hHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1259 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1259 GQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
|||||++||||++++|+++||||||++||+++.+.+.+.+++ .++|+|+|+|+++.+ .++|+++.|.+|+
T Consensus 134 G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~ 208 (213)
T cd03301 134 GQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQ 208 (213)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCE
Confidence 999999999999999999999999999999999888776543 389999999999754 5689999997653
No 297
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-35 Score=325.58 Aligned_cols=201 Identities=22% Similarity=0.226 Sum_probs=162.5
Q ss_pred eEEeeeEEeCCCc---cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEE
Q 000711 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFY 1176 (1338)
Q Consensus 1100 I~f~nV~f~yp~~---~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~ 1176 (1338)
|+++|+++.|++. +++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++.. .+.+++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~---~~~~i~~ 77 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG---PGPDRGY 77 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc---ccCcEEE
Confidence 5789999999752 679999999999999999999999999999999999999999999999988763 3457999
Q ss_pred EcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCC
Q 000711 1177 VPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1338)
Q Consensus 1177 VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 1255 (1338)
|||+|.+|. .|+++|+.++... .+.. ....++.+.++++.+++.+...+. ...
T Consensus 78 v~q~~~~~~~~tv~e~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~~~~~----------~~~ 131 (220)
T cd03293 78 VFQQDALLPWLTVLDNVALGLEL----------QGVP------KAEARERAEELLELVGLSGFENAY----------PHQ 131 (220)
T ss_pred EecccccccCCCHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHcCChhhhhCC----------ccc
Confidence 999999987 6999999753110 0000 000123456677777775443332 246
Q ss_pred CChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCC-CcccccceEEEecCCC
Q 000711 1256 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPA-LIPFHSLELRLIDGEG 1329 (1338)
Q Consensus 1256 LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~-~i~~~d~~l~l~~g~g 1329 (1338)
||||||||++||||++++|+++||||||++||+++.+.+.+.+++ .++|+|+|+|+++ ..+++|+++.|.+|+|
T Consensus 132 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G 210 (220)
T cd03293 132 LSGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPG 210 (220)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCC
Confidence 999999999999999999999999999999999999888776643 3899999999998 4578999999974345
No 298
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-35 Score=330.33 Aligned_cols=198 Identities=21% Similarity=0.325 Sum_probs=168.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 517 (1338)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 2 ~l~~~~l~~~~~-~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 2 TLRTENLTVGYG-TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEEeEEEEEC-CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 478999999996 4689999999999999999999999999999999999999999999999864 123457999
Q ss_pred EecCCCCCCC-CHHHHhcCCCCCC----cccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000711 518 VPQRPYTAVG-TLRDQLIYPLTSD----QEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1338)
Q Consensus 518 v~Q~~~l~~~-tl~eni~~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1338)
+||++.++.+ |+.||+.++.... .......++++.++++.+++.+..++.+ ..||||||||++||||
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~lara 152 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL--------TDLSGGQRQRAFLAMV 152 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc--------ccCCHHHHHHHHHHHH
Confidence 9999988765 9999998753210 0001122456788899999988877765 6899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 593 l~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
++.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|++++|+++
T Consensus 153 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 153 LAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANG 214 (255)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECC
Confidence 9999999999999999999999999988764 4899999999999874 79999999863
No 299
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=3.4e-35 Score=333.23 Aligned_cols=198 Identities=29% Similarity=0.369 Sum_probs=164.7
Q ss_pred cEEEEeEEEEcCC--------CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------
Q 000711 444 YIEFSGVKVVTPT--------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------ 509 (1338)
Q Consensus 444 ~i~~~~v~~~~~~--------~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------ 509 (1338)
.++++||++.|++ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 4789999999963 36899999999999999999999999999999999999999999999998641
Q ss_pred ---cccccEEEEecCCC--CC-CCCHHHHhcCCCCCC-cccCCCCHHHHHHHHHHcCCc-hHHhcCCCCccccCCCCCCh
Q 000711 510 ---DLNKEIFYVPQRPY--TA-VGTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSL 581 (1338)
Q Consensus 510 ---~~~~~i~~v~Q~~~--l~-~~tl~eni~~~~~~~-~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSg 581 (1338)
.+++.++|+||+|. ++ ..|++||+.++.... .......++++.++++.+++. +..++.+ ..|||
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~--------~~LSg 153 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLP--------RQLSG 153 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCCh--------hhCCH
Confidence 13457999999983 43 479999997643210 000112345678899999996 5555544 68999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 582 GEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 582 GqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|||||++||||++++|+++||||||++||+.+++.+.+.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 154 Ge~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~ 226 (265)
T TIGR02769 154 GQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDK 226 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeC
Confidence 999999999999999999999999999999999998888754 2899999999999886 7999999986
No 300
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-35 Score=329.31 Aligned_cols=201 Identities=21% Similarity=0.227 Sum_probs=166.0
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC---CCccEEEeCCCCc------ccccc
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP---LVSGHIAKPGVGS------DLNKE 514 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~---~~~G~i~~~~~~~------~~~~~ 514 (1338)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|.+. ..++.
T Consensus 2 ~~~~~~l~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 80 (246)
T PRK14269 2 IAKTTNLNLFYG-KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKN 80 (246)
T ss_pred ceeeeeeEEEEC-CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhh
Confidence 478999999996 4689999999999999999999999999999999999984 6999999998651 23567
Q ss_pred EEEEecCCCCCCCCHHHHhcCCCCCCccc--CCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000711 515 IFYVPQRPYTAVGTLRDQLIYPLTSDQEV--EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1338)
Q Consensus 515 i~~v~Q~~~l~~~tl~eni~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1338)
++|+||+|.++..|++||+.++....... ....++++.++++.+++.+.+.... .....+||||||||++||||
T Consensus 81 i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----~~~~~~LS~G~~qrv~lara 156 (246)
T PRK14269 81 VGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKL----KQNALALSGGQQQRLCIARA 156 (246)
T ss_pred EEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHh----cCCcccCCHHHHHHHHHHHH
Confidence 99999999999899999998753211100 0122346778899999964432211 01236899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 593 l~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
++++|++++|||||++||+.+...+.+.+++ .++|+|++||+++.+ ..+|++++|++
T Consensus 157 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~ 216 (246)
T PRK14269 157 LAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHL 216 (246)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEEC
Confidence 9999999999999999999999999998865 489999999999976 57999999986
No 301
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.8e-35 Score=320.87 Aligned_cols=195 Identities=21% Similarity=0.292 Sum_probs=162.1
Q ss_pred CCCCCCCCceEEeeeEEeCCCc-cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-
Q 000711 1091 WNSTDYQDSISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA- 1168 (1338)
Q Consensus 1091 wp~~~~~g~I~f~nV~f~yp~~-~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~- 1168 (1338)
||. .+.|+++|+++.|++. .++++|+||+|++||.++|+|+||||||||+++|.|+++|.+|+|.+||.++....
T Consensus 1 ~~~---~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~ 77 (207)
T cd03369 1 WPE---HGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPL 77 (207)
T ss_pred CCC---CCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCH
Confidence 676 5789999999999753 57999999999999999999999999999999999999999999999999886542
Q ss_pred -CCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCc
Q 000711 1169 -GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWD 1247 (1338)
Q Consensus 1169 -~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gld 1247 (1338)
..+.+|+||||+|.+|++|+++|+.+..... +..+.++++ + +
T Consensus 78 ~~~~~~i~~v~q~~~~~~~tv~~~l~~~~~~~-----------------------~~~~~~~l~---~-----------~ 120 (207)
T cd03369 78 EDLRSSLTIIPQDPTLFSGTIRSNLDPFDEYS-----------------------DEEIYGALR---V-----------S 120 (207)
T ss_pred HHHHhhEEEEecCCcccCccHHHHhcccCCCC-----------------------HHHHHHHhh---c-----------c
Confidence 2355799999999999999999996421110 111222221 1 1
Q ss_pred ccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEe
Q 000711 1248 ANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLI 1325 (1338)
Q Consensus 1248 t~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~ 1325 (1338)
.+...||||||||++||||++++|+++||||||++||+++.+.+.+.+++ .++|+|+|+|+++.+..+|+++.|.
T Consensus 121 ---~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~ 197 (207)
T cd03369 121 ---EGGLNLSQGQRQLLCLARALLKRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMD 197 (207)
T ss_pred ---CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEE
Confidence 12357999999999999999999999999999999999999888877654 3899999999999877799999997
Q ss_pred cCC
Q 000711 1326 DGE 1328 (1338)
Q Consensus 1326 ~g~ 1328 (1338)
+|+
T Consensus 198 ~g~ 200 (207)
T cd03369 198 AGE 200 (207)
T ss_pred CCE
Confidence 653
No 302
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-35 Score=328.15 Aligned_cols=207 Identities=21% Similarity=0.310 Sum_probs=169.6
Q ss_pred eEEeeeEEeCCCc-cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--CCcccEEE
Q 000711 1100 ISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFY 1176 (1338)
Q Consensus 1100 I~f~nV~f~yp~~-~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~--~lr~~i~~ 1176 (1338)
|+++|+++.|++. .++++|+||++++||.++|+||||||||||+++|.|+++|++|+|.++|.++.... ..+++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 5789999999754 47999999999999999999999999999999999999999999999998886542 23557999
Q ss_pred EcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCc-ccCC
Q 000711 1177 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WEDI 1255 (1338)
Q Consensus 1177 VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~-~g~~ 1255 (1338)
+||+|.+|..|++||+.++..... ...+.+.++..++...++..+.|+++..+ ....
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 138 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGAT----------------------REEVEEAARAANAHEFIMELPEGYDTVIGERGVK 138 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCC----------------------HHHHHHHHHHcCcHHHHHhcccCcceeeccCCCc
Confidence 999999999999999976432100 01112223334444555555556666553 4578
Q ss_pred CChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1256 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1256 LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
||+|||||++||||++++|+++||||||++||.++.+.+.+.+++ .+.|+|+++|.++.+..+|+++.|.+|.
T Consensus 139 LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~ 213 (234)
T cd03251 139 LSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGK 213 (234)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCe
Confidence 999999999999999999999999999999999999988877654 4899999999999888899999997765
No 303
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-35 Score=331.84 Aligned_cols=199 Identities=23% Similarity=0.258 Sum_probs=164.6
Q ss_pred CCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCCc-------
Q 000711 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS------- 509 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~------- 509 (1338)
...++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 10 ~~~l~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 10 QPQIKVENLNLWYG-EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred ceeEEEeeeEEEeC-CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 34799999999985 46799999999999999999999999999999999999985 899999998541
Q ss_pred -cccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCch----HHhcCCCCccccCCCCCChhHH
Q 000711 510 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 584 (1338)
Q Consensus 510 -~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGqk 584 (1338)
..++.++|+||++.++..|++||+.++...........++++.++++.+++.+ ..++. ...||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LSgG~~ 160 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSP--------ALSLSGGQQ 160 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCC--------hhhCCHHHH
Confidence 23467999999999888999999987532110000111245677888888843 23332 368999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 585 QRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
||++|||||+.+|+++||||||++||+.+...+++.+++ .++|+|++||+++.+ ..||++++|++
T Consensus 161 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~ 228 (258)
T PRK14268 161 QRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLM 228 (258)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999998865 378999999999987 56999999986
No 304
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-33 Score=351.53 Aligned_cols=189 Identities=21% Similarity=0.321 Sum_probs=149.8
Q ss_pred CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC---CccEEEeCCCC-cc--ccccEEEEecCCC-CCCCCHH
Q 000711 458 NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL---VSGHIAKPGVG-SD--LNKEIFYVPQRPY-TAVGTLR 530 (1338)
Q Consensus 458 ~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~---~~G~i~~~~~~-~~--~~~~i~~v~Q~~~-l~~~tl~ 530 (1338)
..+++|++.-++||+.+.+.||.|||||||+++|+|-.+- ..|+|..||.+ ++ -++.++|++|... ++..|||
T Consensus 128 ~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVr 207 (1391)
T KOG0065|consen 128 IQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVR 207 (1391)
T ss_pred ceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEe
Confidence 4799999999999999999999999999999999998763 35799999987 11 1567999999775 5567999
Q ss_pred HHhcCCCCCCcc---cCCCCHHH-----HHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000711 531 DQLIYPLTSDQE---VEPLTHGG-----MVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAIL 602 (1338)
Q Consensus 531 eni~~~~~~~~~---~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illL 602 (1338)
|-+.|....... .++.++.+ .+.+++..||++-.+.+..++ -....|||||.||++|-+++.+|+++++
T Consensus 208 eTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd---~~RGvSGGerKRvsi~E~~v~~~~~~~~ 284 (1391)
T KOG0065|consen 208 ETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGND---MVRGVSGGERKRVSIGEMLVGPASILFW 284 (1391)
T ss_pred ehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceeccc---ccccccCcccceeeeeeeeecCcceeee
Confidence 999875432111 11233333 236788899988766653221 2356999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChh--hHhhcceEEEccC
Q 000711 603 DECTSAVTTDMEERFCAKVRA----MGTSCITISHRPA--LVAFHDVVLSLDG 649 (1338)
Q Consensus 603 DEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~--~~~~~d~i~~l~~ 649 (1338)
||+|.|||..+.-++.+.+++ .+.|.++.-|+++ .....|.|++|.+
T Consensus 285 De~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e 337 (1391)
T KOG0065|consen 285 DEITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE 337 (1391)
T ss_pred ecccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec
Confidence 999999999999999988875 3788888888764 5667899999986
No 305
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.2e-35 Score=323.97 Aligned_cols=202 Identities=25% Similarity=0.339 Sum_probs=159.7
Q ss_pred EEeeeEEeCCCc-cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEE
Q 000711 1101 SFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYV 1177 (1338)
Q Consensus 1101 ~f~nV~f~yp~~-~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~V 1177 (1338)
+++||++.|++. +++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++... ...+.+++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 468999998652 5799999999999999999999999999999999999999999999999988654 2234579999
Q ss_pred cCCC--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCC
Q 000711 1178 PQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1338)
Q Consensus 1178 pQdP--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 1255 (1338)
||+| .++..|+++|+.++... .+.. ....+..+.++++.+++....++. ...
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~~~~~----------~~~ 134 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLEN----------LGLP------EEEIEERVEEALELVGLEGLRDRS----------PFT 134 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHcCcHhhhcCC----------ccc
Confidence 9998 46788999999653110 0000 000122345566666664433322 357
Q ss_pred CChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCcc-cccceEEEecCC
Q 000711 1256 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIP-FHSLELRLIDGE 1328 (1338)
Q Consensus 1256 LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i~-~~d~~l~l~~g~ 1328 (1338)
||||||||++||||++++|++|||||||++||+++.+.+.+.+++ .++|+|+|+|+++.+. ++|+++.|.+|+
T Consensus 135 LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 135 LSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999999999999888776543 3899999999998664 599999997663
No 306
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.7e-35 Score=324.65 Aligned_cols=202 Identities=25% Similarity=0.295 Sum_probs=160.9
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-----CCcccE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 1174 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~-----~lr~~i 1174 (1338)
|+++||++.|++.+++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++.... ..++++
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 81 (222)
T PRK10908 2 IRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQI 81 (222)
T ss_pred EEEEeeEEEecCCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhhe
Confidence 789999999965567999999999999999999999999999999999999999999999999887642 135679
Q ss_pred EEEcCCCCCC-CCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCccc
Q 000711 1175 FYVPQRPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1338)
Q Consensus 1175 ~~VpQdP~LF-~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 1253 (1338)
+|+||+|.+| ..|+++|+.++... .+.. ....++.+.++++.+++.....+. .
T Consensus 82 ~~~~q~~~~~~~~tv~~~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~~~~~----------~ 135 (222)
T PRK10908 82 GMIFQDHHLLMDRTVYDNVAIPLII----------AGAS------GDDIRRRVSAALDKVGLLDKAKNF----------P 135 (222)
T ss_pred EEEecCccccccccHHHHHHhHHHh----------cCCC------HHHHHHHHHHHHHHcCChhhhhCC----------c
Confidence 9999999874 67999999764210 0000 000112344556666664433222 2
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEEecC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDG 1327 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l~~g 1327 (1338)
..||||||||++||||++++|++|||||||++||.++.+.+.+.+++ .+.|+|+|+|+++.+ .++|+++.|.+|
T Consensus 136 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G 213 (222)
T PRK10908 136 IQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDG 213 (222)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999998887766543 479999999999866 468999999665
No 307
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=8.3e-35 Score=316.19 Aligned_cols=188 Identities=28% Similarity=0.419 Sum_probs=163.0
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-----ccccccEEEEe
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP 519 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v~ 519 (1338)
++++||++.|+ ++++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ ...+++++|+|
T Consensus 1 l~i~~l~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (201)
T cd03231 1 LEADELTCERD-GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLLYLG 79 (201)
T ss_pred CEEEEEEEEeC-CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheEEec
Confidence 46899999985 4679999999999999999999999999999999999999999999999865 12456799999
Q ss_pred cCCCCC-CCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000711 520 QRPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1338)
Q Consensus 520 Q~~~l~-~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1338)
|++.++ ..|++||+.+.... ..++++.++++.+++.++.++.+ .+||||||||++||||++++|+
T Consensus 80 q~~~~~~~~tv~e~l~~~~~~------~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~laral~~~p~ 145 (201)
T cd03231 80 HAPGIKTTLSVLENLRFWHAD------HSDEQVEEALARVGLNGFEDRPV--------AQLSAGQQRRVALARLLLSGRP 145 (201)
T ss_pred cccccCCCcCHHHHHHhhccc------ccHHHHHHHHHHcCChhhhcCch--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 999775 57999999875321 24567889999999987766654 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChh-hHhhcceEEEc
Q 000711 599 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPA-LVAFHDVVLSL 647 (1338)
Q Consensus 599 illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~-~~~~~d~i~~l 647 (1338)
++||||||++||+.+.+.+.+.+++ .|+|+|++||+.. ....+++++++
T Consensus 146 llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 146 LWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 9999999999999999999998864 3899999999765 55678888876
No 308
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-35 Score=331.32 Aligned_cols=199 Identities=20% Similarity=0.210 Sum_probs=166.4
Q ss_pred CCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCCc-------
Q 000711 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS------- 509 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~------- 509 (1338)
.+.|+++||++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 17 ~~~l~~~nl~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~ 95 (267)
T PRK14235 17 EIKMRARDVSVFYG-EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDV 95 (267)
T ss_pred CceEEEEeEEEEEC-CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccch
Confidence 45799999999996 46899999999999999999999999999999999999975 899999998541
Q ss_pred -cccccEEEEecCCCCCCCCHHHHhcCCCCCCcc--cCCCCHHHHHHHHHHcCCchH----HhcCCCCccccCCCCCChh
Q 000711 510 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE--VEPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLG 582 (1338)
Q Consensus 510 -~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgG 582 (1338)
.+++.++|+||+|.++..|+.||+.++...... ......+++.++++.+++.+. .++. ..+||||
T Consensus 96 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LSgG 167 (267)
T PRK14235 96 VELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEP--------GTGLSGG 167 (267)
T ss_pred HHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCC--------cccCCHH
Confidence 235679999999998888999999875321110 011123457788999998653 2232 3689999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 583 EQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 583 qkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
||||++|||||+.+|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+ ..+|++++|++
T Consensus 168 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~ 237 (267)
T PRK14235 168 QQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHL 237 (267)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEEC
Confidence 99999999999999999999999999999999999998865 368999999999988 57899999986
No 309
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3.3e-35 Score=328.80 Aligned_cols=207 Identities=25% Similarity=0.352 Sum_probs=170.2
Q ss_pred eEEeeeEEeCCC--ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--CCcccEE
Q 000711 1100 ISFSKLDIITPS--QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIF 1175 (1338)
Q Consensus 1100 I~f~nV~f~yp~--~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~--~lr~~i~ 1175 (1338)
|+++|+++.|++ ..++|+|+||+|++||.++|+|+||||||||+++|.|+++|.+|+|.++|.++.... ..+.+++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 578999999975 357999999999999999999999999999999999999999999999999886542 2245799
Q ss_pred EEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCc-ccC
Q 000711 1176 YVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WED 1254 (1338)
Q Consensus 1176 ~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~-~g~ 1254 (1338)
|+||+|.+|+.|++||+.++.... ....+.+.++..++..+++..|.|+++..+ ...
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 138 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDA----------------------TDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGS 138 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCC----------------------CHHHHHHHHHHcChHHHHHhhccccceeeccCCc
Confidence 999999999999999997643210 011122233444455555566667776653 457
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
+||||||||++||||++++|+++||||||++||+.+.+.+.+.+++ .|+|+|+++|+++.+.++|+++.|.+|.
T Consensus 139 ~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~ 214 (238)
T cd03249 139 QLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQ 214 (238)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCE
Confidence 8999999999999999999999999999999999999988877643 5899999999999888999999997764
No 310
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.1e-35 Score=326.26 Aligned_cols=194 Identities=25% Similarity=0.351 Sum_probs=161.9
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-------cccccEEE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIFY 517 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~~ 517 (1338)
|+++||++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|
T Consensus 1 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (230)
T TIGR03410 1 LEVSNLNVYYG-QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAY 79 (230)
T ss_pred CEEEeEEEEeC-CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeEE
Confidence 46899999996 46899999999999999999999999999999999999999999999998541 12457999
Q ss_pred EecCCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcC-CchHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000711 518 VPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVD-LEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1338)
Q Consensus 518 v~Q~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~-l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1338)
+||++.++.. |++||+.++..... ....+...++++.++ +.+..++.+ .+||||||||++||||+++
T Consensus 80 ~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 80 VPQGREIFPRLTVEENLLTGLAALP---RRSRKIPDEIYELFPVLKEMLGRRG--------GDLSGGQQQQLAIARALVT 148 (230)
T ss_pred eccCCcccCCCcHHHHHHHHHHhcC---cchHHHHHHHHHHHHhHHHHhhCCh--------hhCCHHHHHHHHHHHHHhc
Confidence 9999988875 99999987532211 011233466677665 455555543 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 596 KPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 596 ~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
+|++++|||||++||+.+.+.+.+.+.+ .++|+|++||+++.+. .+|++++++++
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g 208 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERG 208 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999988764 3789999999999887 69999999863
No 311
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.9e-35 Score=306.59 Aligned_cols=208 Identities=20% Similarity=0.248 Sum_probs=167.9
Q ss_pred CceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-----CCcc
Q 000711 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGC 1172 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~-----~lr~ 1172 (1338)
-.|++++|++.| +++.||+||||+|++||.++|+|+||||||||++++.|++.|++|+|.++|.||..++ ..|+
T Consensus 7 ~~I~vr~v~~~f-G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~ 85 (263)
T COG1127 7 PLIEVRGVTKSF-GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRK 85 (263)
T ss_pred ceEEEeeeeeec-CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHh
Confidence 469999999998 5678999999999999999999999999999999999999999999999999998872 3466
Q ss_pred cEEEEcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccc-cCchHHHHHHHhhCCchhh-hhhhcccCccc
Q 000711 1173 GIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTT-NILDSYLKTILEGVRLSYL-LEREEVGWDAN 1249 (1338)
Q Consensus 1173 ~i~~VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~-~~~d~~i~~~l~~~~L~~~-i~~~~~Gldt~ 1249 (1338)
+++++.|.--||+. |++||+.+|.-.... ++ +..++.+..-|+.|||... .+.
T Consensus 86 r~GvlFQ~gALFssltV~eNVafplre~~~----------------lp~~~i~~lv~~KL~~VGL~~~~~~~-------- 141 (263)
T COG1127 86 RMGVLFQQGALFSSLTVFENVAFPLREHTK----------------LPESLIRELVLMKLELVGLRGAAADL-------- 141 (263)
T ss_pred heeEEeeccccccccchhHhhheehHhhcc----------------CCHHHHHHHHHHHHHhcCCChhhhhh--------
Confidence 89999999999975 999999988532110 00 0012222333566666433 111
Q ss_pred CcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHH----hcCCeEEEeccCCC-CcccccceEEE
Q 000711 1250 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPA-LIPFHSLELRL 1324 (1338)
Q Consensus 1250 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~----~~~~TvI~IAHRl~-~i~~~d~~l~l 1324 (1338)
....||||.+.|.|+||||.-+|+|+++|||||+||+-+-..+.++++ ..|.|+|+|+|.++ +...+|++..|
T Consensus 142 --~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L 219 (263)
T COG1127 142 --YPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVL 219 (263)
T ss_pred --CchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEE
Confidence 245799999999999999999999999999999999998776665543 35999999999995 66778999999
Q ss_pred ecCCCCeE
Q 000711 1325 IDGEGNWE 1332 (1338)
Q Consensus 1325 ~~g~g~~~ 1332 (1338)
.||+=-|+
T Consensus 220 ~~gkv~~~ 227 (263)
T COG1127 220 ADGKVIAE 227 (263)
T ss_pred eCCEEEEe
Confidence 87764443
No 312
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=6.5e-35 Score=309.12 Aligned_cols=160 Identities=34% Similarity=0.590 Sum_probs=146.3
Q ss_pred EEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEE
Q 000711 445 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1338)
Q Consensus 445 i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 517 (1338)
++++|+++.|+++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 4689999999753 579999999999999999999999999999999999999999999999864 123567999
Q ss_pred EecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000711 518 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1338)
Q Consensus 518 v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1338)
++|+|.++..|++||+ ||||||||++||||++++|
T Consensus 81 ~~q~~~~~~~tv~~~l---------------------------------------------LS~G~~qrv~la~al~~~p 115 (173)
T cd03246 81 LPQDDELFSGSIAENI---------------------------------------------LSGGQRQRLGLARALYGNP 115 (173)
T ss_pred ECCCCccccCcHHHHC---------------------------------------------cCHHHHHHHHHHHHHhcCC
Confidence 9999998888999887 9999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHhhcceEEEccC
Q 000711 598 KFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 598 ~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~~~d~i~~l~~ 649 (1338)
+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+..+|++++|++
T Consensus 116 ~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~ 170 (173)
T cd03246 116 RILVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLED 170 (173)
T ss_pred CEEEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 99999999999999999999888754 48899999999999899999999986
No 313
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.9e-35 Score=317.77 Aligned_cols=191 Identities=27% Similarity=0.362 Sum_probs=163.9
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-----ccccccEEEEe
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP 519 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v~ 519 (1338)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|++
T Consensus 2 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~~~~ 80 (204)
T PRK13538 2 LEARNLACERD-ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLLYLG 80 (204)
T ss_pred eEEEEEEEEEC-CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheEEeC
Confidence 78999999986 4679999999999999999999999999999999999999999999999864 12356799999
Q ss_pred cCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000711 520 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1338)
Q Consensus 520 Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1338)
|++.++. .|++||+.++..... ...++++.++++.+++.++.++.+ ..||||||||++||||++++|+
T Consensus 81 ~~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrl~la~al~~~p~ 149 (204)
T PRK13538 81 HQPGIKTELTALENLRFYQRLHG---PGDDEALWEALAQVGLAGFEDVPV--------RQLSAGQQRRVALARLWLTRAP 149 (204)
T ss_pred CccccCcCCcHHHHHHHHHHhcC---ccHHHHHHHHHHHcCCHHHhhCCh--------hhcCHHHHHHHHHHHHHhcCCC
Confidence 9987765 699999987642211 123467888999999988777654 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEc
Q 000711 599 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSL 647 (1338)
Q Consensus 599 illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l 647 (1338)
+++|||||++||+.+.+.+++.+++ .+.|+|++||+++.+. +.++++++
T Consensus 150 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 150 LWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 9999999999999999999998764 3889999999999885 45677666
No 314
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-35 Score=329.46 Aligned_cols=198 Identities=22% Similarity=0.320 Sum_probs=166.5
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------c-ccccEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~-~~~~i~ 516 (1338)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .+..++
T Consensus 5 ~l~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (255)
T PRK11300 5 LLSVSGLMMRFG-GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGVV 83 (255)
T ss_pred eEEEeeEEEEEC-CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCeE
Confidence 689999999996 46899999999999999999999999999999999999999999999998641 1 134589
Q ss_pred EEecCCCCCCC-CHHHHhcCCCCCC-------c--------ccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCC
Q 000711 517 YVPQRPYTAVG-TLRDQLIYPLTSD-------Q--------EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELS 580 (1338)
Q Consensus 517 ~v~Q~~~l~~~-tl~eni~~~~~~~-------~--------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LS 580 (1338)
|+||+|.++.. |++||+.++.... . .......+++.++++.+++.+..++.+ .+||
T Consensus 84 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS 155 (255)
T PRK11300 84 RTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQA--------GNLA 155 (255)
T ss_pred EeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCCh--------hhCC
Confidence 99999998875 9999999753210 0 000011245677888899987777655 6899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---c-CCeEEEEecChhhH-hhcceEEEccCC
Q 000711 581 LGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 581 gGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~-~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
||||||++||||++.+|+++||||||++||+.+.+.+.+.+.+ . |+|+|++||+++.+ ..||++++++++
T Consensus 156 ~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g 230 (255)
T PRK11300 156 YGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQG 230 (255)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999888753 3 89999999999987 469999999863
No 315
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=6.1e-35 Score=325.75 Aligned_cols=197 Identities=27% Similarity=0.403 Sum_probs=167.3
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----cccccEEEEec
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 520 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~Q 520 (1338)
++++|+++.|++ +++++|+||++.+||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+||
T Consensus 1 i~i~~l~~~~~~-~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~~q 79 (237)
T TIGR00968 1 IEIANISKRFGS-FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFVFQ 79 (237)
T ss_pred CEEEEEEEEECC-eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEEec
Confidence 468999999964 6899999999999999999999999999999999999999999999998651 23467999999
Q ss_pred CCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000711 521 RPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1338)
Q Consensus 521 ~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1338)
+|.++.+ |++||+.+............++++.++++.+++.++.++.+ .+||+|||||++||||++++|++
T Consensus 80 ~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~lS~G~~qrl~laral~~~p~l 151 (237)
T TIGR00968 80 HYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRYP--------NQLSGGQRQRVALARALAVEPQV 151 (237)
T ss_pred ChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh--------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 9998875 99999987532111001112356778899999987777755 68999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHc---c-CCeEEEEecChhhH-hhcceEEEccCC
Q 000711 600 AILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 600 llLDEpts~LD~~~~~~i~~~l~~---~-~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
++|||||++||+++++.+.+.+++ . ++|+|++||+++.+ +.+|++++++++
T Consensus 152 lllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g 207 (237)
T TIGR00968 152 LLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNG 207 (237)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECC
Confidence 999999999999999999998864 2 79999999999986 569999999863
No 316
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.6e-35 Score=327.15 Aligned_cols=205 Identities=24% Similarity=0.287 Sum_probs=162.9
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCC-----CCCCceEEcCCCCCcccc----CC
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLW-----PVVSGSLTKPSQHIDEEA----GS 1170 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~-----~~~sG~I~idg~dI~~~~----~l 1170 (1338)
|+++||++.|++ .++|+|+||+|++||+++|+|+||||||||+++|.|++ +|.+|+|.++|.++.... ..
T Consensus 1 i~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (227)
T cd03260 1 IELRDLNVYYGD-KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLEL 79 (227)
T ss_pred CEEEEEEEEcCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHH
Confidence 578999999965 47999999999999999999999999999999999999 999999999999886542 23
Q ss_pred cccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC
Q 000711 1171 GCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1338)
Q Consensus 1171 r~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 1250 (1338)
+++++||||+|.+|..|++||+.++... .+.. .....+..+.++++.+++.....+.+ +
T Consensus 80 ~~~i~~~~q~~~~~~~tv~e~l~~~~~~----------~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~---~--- 138 (227)
T cd03260 80 RRRVGMVFQKPNPFPGSIYDNVAYGLRL----------HGIK-----LKEELDERVEEALRKAALWDEVKDRL---H--- 138 (227)
T ss_pred HhhEEEEecCchhccccHHHHHHhHHHh----------cCCC-----cHHHHHHHHHHHHHHcCCChHHhccC---C---
Confidence 5579999999999988999999754210 0000 00001234556677777644332210 0
Q ss_pred cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCc-ccccceEEEecC
Q 000711 1251 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDG 1327 (1338)
Q Consensus 1251 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i-~~~d~~l~l~~g 1327 (1338)
..+||||||||++||||++++|++|||||||++||.++.+.+.+.+++ ..+|+|+|+|+++.+ .++|+++.|.+|
T Consensus 139 --~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G 216 (227)
T cd03260 139 --ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNG 216 (227)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 357999999999999999999999999999999999999888776643 238999999999864 579999999776
Q ss_pred C
Q 000711 1328 E 1328 (1338)
Q Consensus 1328 ~ 1328 (1338)
+
T Consensus 217 ~ 217 (227)
T cd03260 217 R 217 (227)
T ss_pred E
Confidence 4
No 317
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-35 Score=326.95 Aligned_cols=198 Identities=23% Similarity=0.308 Sum_probs=165.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------c-ccccEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~-~~~~i~ 516 (1338)
.++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .++.++
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 81 (241)
T PRK10895 3 TLTAKNLAKAYK-GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIG 81 (241)
T ss_pred eEEEeCcEEEeC-CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeE
Confidence 488999999996 46899999999999999999999999999999999999999999999998641 1 246799
Q ss_pred EEecCCCCCC-CCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 517 YVPQRPYTAV-GTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 517 ~v~Q~~~l~~-~tl~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
|+||++.++. .|++||+.++...... .....+.++.++++.+++.+..++.+ ..||||||||++||||++
T Consensus 82 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~ 153 (241)
T PRK10895 82 YLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMG--------QSLSGGERRRVEIARALA 153 (241)
T ss_pred EeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHHhhcch--------hhCCHHHHHHHHHHHHHh
Confidence 9999998877 5999999875321110 01112345778889899887666544 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..+|++++|+++
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G 213 (241)
T PRK10895 154 ANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQG 213 (241)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCC
Confidence 99999999999999999999988877653 589999999999755 679999999763
No 318
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-35 Score=322.13 Aligned_cols=201 Identities=22% Similarity=0.270 Sum_probs=161.6
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-CCcccEEEEc
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-GSGCGIFYVP 1178 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~-~lr~~i~~Vp 1178 (1338)
|+++||++.|++ .++|+|+||+|++| .+||+||||||||||+++|.|+++|++|+|.++|.++.... ..+.+++|||
T Consensus 1 i~~~~~~~~~~~-~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 78 (211)
T cd03264 1 LQLENLTKRYGK-KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYLP 78 (211)
T ss_pred CEEEEEEEEECC-EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEec
Confidence 579999999865 47999999999999 99999999999999999999999999999999999886542 2356799999
Q ss_pred CCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1179 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1179 QdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
|+|.+|.+ |+++|+.++... .+.. .......+.++++.+++....+. . ...||
T Consensus 79 q~~~~~~~~tv~~~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~~~~-------~---~~~LS 132 (211)
T cd03264 79 QEFGVYPNFTVREFLDYIAWL----------KGIP------SKEVKARVDEVLELVNLGDRAKK-------K---IGSLS 132 (211)
T ss_pred CCCcccccCCHHHHHHHHHHH----------hCCC------HHHHHHHHHHHHHHCCCHHHHhC-------c---hhhCC
Confidence 99999986 999999642100 0000 00012234566677777543322 2 24699
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
||||||++||||++++|+++||||||++||.++.+.+.+.+++ .+.|+|+|+|+++.+ +++|+++.+.+|+
T Consensus 133 ~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~ 206 (211)
T cd03264 133 GGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGK 206 (211)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999988877654 369999999999876 5799999997653
No 319
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-35 Score=329.91 Aligned_cols=199 Identities=21% Similarity=0.249 Sum_probs=168.8
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEE
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIF 516 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~ 516 (1338)
..|+++||++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++
T Consensus 6 ~~l~i~~l~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (265)
T PRK10253 6 ARLRGEQLTLGYG-KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIG 84 (265)
T ss_pred cEEEEEEEEEEEC-CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhheE
Confidence 5799999999997 4679999999999999999999999999999999999999999999999864 12345799
Q ss_pred EEecCCCCCC-CCHHHHhcCCCCCCc----ccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHH
Q 000711 517 YVPQRPYTAV-GTLRDQLIYPLTSDQ----EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 591 (1338)
Q Consensus 517 ~v~Q~~~l~~-~tl~eni~~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalAR 591 (1338)
|+||++.++. .|++||+.++..... ......++++.++++.+++.+..++.+ .+||||||||++|||
T Consensus 85 ~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~Gq~qrv~lar 156 (265)
T PRK10253 85 LLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSV--------DTLSGGQRQRAWIAM 156 (265)
T ss_pred EeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc--------ccCChHHHHHHHHHH
Confidence 9999998764 699999987531110 001112346788999999988877765 689999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 592 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 592 al~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
|++++|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..+|++++|+++
T Consensus 157 al~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G 220 (265)
T PRK10253 157 VLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREG 220 (265)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999988754 388999999999866 579999999863
No 320
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.5e-35 Score=329.37 Aligned_cols=212 Identities=23% Similarity=0.295 Sum_probs=162.0
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc---CCcccEEE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIFY 1176 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~---~lr~~i~~ 1176 (1338)
|+++||++.|++ +++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++.... ..+.+++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (236)
T cd03219 1 LEVRGLTKRFGG-LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGR 79 (236)
T ss_pred CeeeeeEEEECC-EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEE
Confidence 478999999974 56999999999999999999999999999999999999999999999999887652 22456999
Q ss_pred EcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCC
Q 000711 1177 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1338)
Q Consensus 1177 VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 1255 (1338)
|||+|.+|.+ |+++|+.++....... ...+. .. ........+.+.++++.+++....++ ....
T Consensus 80 v~q~~~l~~~~tv~~~l~~~~~~~~~~-~~~~~--~~---~~~~~~~~~~~~~~l~~~~l~~~~~~----------~~~~ 143 (236)
T cd03219 80 TFQIPRLFPELTVLENVMVAAQARTGS-GLLLA--RA---RREEREARERAEELLERVGLADLADR----------PAGE 143 (236)
T ss_pred EecccccccCCCHHHHHHHHHhhcccc-ccccc--cc---cccHHHHHHHHHHHHHHcCccchhhC----------Chhh
Confidence 9999999987 9999997542100000 00000 00 00000012234556666666332211 1357
Q ss_pred CChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1256 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1256 LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
||||||||++||||++++|+++||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+ .++|+++.|.+|+
T Consensus 144 LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~ 220 (236)
T cd03219 144 LSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGR 220 (236)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999888776643 589999999999866 6799999997654
No 321
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-35 Score=328.05 Aligned_cols=199 Identities=24% Similarity=0.252 Sum_probs=162.3
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEE
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFY 1176 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~ 1176 (1338)
.|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++... ...+.+++|
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~ 81 (241)
T PRK14250 3 EIEFKEVSYSSFG-KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGM 81 (241)
T ss_pred eEEEEeEEEEeCC-eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEE
Confidence 4899999999964 5799999999999999999999999999999999999999999999999988754 234557999
Q ss_pred EcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCch-hhhhhhcccCcccCcccCC
Q 000711 1177 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLEREEVGWDANLNWEDI 1255 (1338)
Q Consensus 1177 VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~-~~i~~~~~Gldt~~~~g~~ 1255 (1338)
+||+|.+|+.|+++|+.++..... ..+..+.++++.+++. +...+ ....
T Consensus 82 ~~q~~~~~~~tv~e~l~~~~~~~~--------------------~~~~~~~~~l~~~~l~~~~~~~----------~~~~ 131 (241)
T PRK14250 82 VFQQPHLFEGTVKDNIEYGPMLKG--------------------EKNVDVEYYLSIVGLNKEYATR----------DVKN 131 (241)
T ss_pred EecCchhchhhHHHHHhcchhhcC--------------------cHHHHHHHHHHHcCCCHHHhhC----------Cccc
Confidence 999999999999999975421000 0012344556666663 22211 2357
Q ss_pred CChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1256 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1256 LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
||||||||++||||++++|++|||||||++||.++.+.+.+.+++ .|+|+|+|+|+++.+ .++|+++.|.+|.
T Consensus 132 LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~ 209 (241)
T PRK14250 132 LSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGI 209 (241)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999887776543 389999999999865 5799999997654
No 322
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=7e-35 Score=310.56 Aligned_cols=163 Identities=29% Similarity=0.438 Sum_probs=148.6
Q ss_pred EEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-----ccccccEEEE
Q 000711 445 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYV 518 (1338)
Q Consensus 445 i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v 518 (1338)
++++|+++.|++. +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|+
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 80 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISVL 80 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEEE
Confidence 4789999998754 479999999999999999999999999999999999999999999999864 1235679999
Q ss_pred ecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000711 519 PQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1338)
Q Consensus 519 ~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1338)
||+|++++.|++||+ + ..||||||||++||||++++|+
T Consensus 81 ~q~~~~~~~tv~~~i----------------------------------~--------~~LS~G~~qrv~laral~~~p~ 118 (178)
T cd03247 81 NQRPYLFDTTLRNNL----------------------------------G--------RRFSGGERQRLALARILLQDAP 118 (178)
T ss_pred ccCCeeecccHHHhh----------------------------------c--------ccCCHHHHHHHHHHHHHhcCCC
Confidence 999998888999987 2 5799999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhhcceEEEccC
Q 000711 599 FAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 599 illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i~~l~~ 649 (1338)
++||||||++||+.+.+.+++.+++ .++|+|++||+++.+..+|++++|++
T Consensus 119 ~lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~ 171 (178)
T cd03247 119 IVLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLEN 171 (178)
T ss_pred EEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEEC
Confidence 9999999999999999999998865 38899999999999999999999986
No 323
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=9.1e-35 Score=328.46 Aligned_cols=197 Identities=30% Similarity=0.395 Sum_probs=167.1
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------cccccEEEE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEIFYV 518 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i~~v 518 (1338)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++|+
T Consensus 2 l~~~~l~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (256)
T TIGR03873 2 LRLSRVSWSAG-GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVALV 80 (256)
T ss_pred ceEEeEEEEEC-CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEEe
Confidence 68999999986 46899999999999999999999999999999999999999999999998641 234579999
Q ss_pred ecCCCC-CCCCHHHHhcCCCCCC-cc---cCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000711 519 PQRPYT-AVGTLRDQLIYPLTSD-QE---VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1338)
Q Consensus 519 ~Q~~~l-~~~tl~eni~~~~~~~-~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1338)
||++.+ +..|++||+.++.... .. .....++++.++++.+++.+..++.+ ..||||||||++||||+
T Consensus 81 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al 152 (256)
T TIGR03873 81 EQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM--------STLSGGERQRVHVARAL 152 (256)
T ss_pred cccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc--------ccCCHHHHHHHHHHHHH
Confidence 999854 5679999998753211 00 01112346788999999988777755 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 594 ~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
+.+|+++||||||++||+.+...+.+.+++ .|.|+|++||+++.+ ..+|++++|+++
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G 213 (256)
T TIGR03873 153 AQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGG 213 (256)
T ss_pred hcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 999999999999999999999999888764 388999999999988 579999999863
No 324
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=329.63 Aligned_cols=198 Identities=20% Similarity=0.242 Sum_probs=165.1
Q ss_pred CCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC-----CCccEEEeCCCCc-------
Q 000711 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS------- 509 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~------- 509 (1338)
...++++||++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 11 ~~~l~i~nl~~~~~~-~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~ 89 (269)
T PRK14259 11 NIIISLQNVTISYGT-FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDP 89 (269)
T ss_pred CceEEEEeEEEEECC-EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCH
Confidence 457999999999964 679999999999999999999999999999999999987 6899999998541
Q ss_pred -cccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCch----HHhcCCCCccccCCCCCChhHH
Q 000711 510 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 584 (1338)
Q Consensus 510 -~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGqk 584 (1338)
.+++.++|+||++.++..|++||+.++...... ....++++.++++.+++.. ..++. ..+||||||
T Consensus 90 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~l~~~~~~~--------~~~LS~G~~ 160 (269)
T PRK14259 90 VEVRRRIGMVFQQPNPFPKSIYENIAFGARINGY-TGDMDELVERSLRKAAVWDECKDKLNES--------GYSLSGGQQ 160 (269)
T ss_pred HHHhhceEEEccCCccchhhHHHHHhhhhhhcCC-cHHHHHHHHHHHHHhCCcchhhhhhCCC--------cccCCHHHH
Confidence 234679999999998888999999886432111 1112345677888887743 22322 368999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 585 QRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
||++|||||+++|+++||||||++||+.+.+.+++.+++ .++|+|++||+++.+ ..||++++|++
T Consensus 161 qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~ 228 (269)
T PRK14259 161 QRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNA 228 (269)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEec
Confidence 999999999999999999999999999999999998865 368999999999876 58999999985
No 325
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=7.1e-35 Score=323.13 Aligned_cols=198 Identities=25% Similarity=0.374 Sum_probs=164.8
Q ss_pred cEEEEeEEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC---CCccEEEeCCCC---cccccc
Q 000711 444 YIEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP---LVSGHIAKPGVG---SDLNKE 514 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~---~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~---~~~G~i~~~~~~---~~~~~~ 514 (1338)
.+.|+||++.||+. +++++|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|.+ ...++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (226)
T cd03234 3 VLPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKC 82 (226)
T ss_pred cceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhccc
Confidence 36799999999864 689999999999999999999999999999999999999 999999999865 234678
Q ss_pred EEEEecCCCCCCC-CHHHHhcCCCCCC--cc-cCCCCHHHHHH-HHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHH
Q 000711 515 IFYVPQRPYTAVG-TLRDQLIYPLTSD--QE-VEPLTHGGMVE-LLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1338)
Q Consensus 515 i~~v~Q~~~l~~~-tl~eni~~~~~~~--~~-~~~~~~~~~~~-~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1338)
++|+||++.++.+ |++||+.++.... .. ........+.+ .++.+++.+..++.+ ..||||||||++|
T Consensus 83 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~l 154 (226)
T cd03234 83 VAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLV--------KGISGGERRRVSI 154 (226)
T ss_pred EEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccc--------cCcCHHHHHHHHH
Confidence 9999999988876 9999998743211 00 01111223444 788888877666544 6899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecCh--hhHhhcceEEEccC
Q 000711 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRP--ALVAFHDVVLSLDG 649 (1338)
Q Consensus 590 ARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~--~~~~~~d~i~~l~~ 649 (1338)
|||++++|+++||||||++||+.+...+.+.+++ .++|+|++||++ +....+|++++|++
T Consensus 155 aral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~ 219 (226)
T cd03234 155 AVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS 219 (226)
T ss_pred HHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999988764 478999999997 45678999999986
No 326
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=9.2e-35 Score=315.76 Aligned_cols=188 Identities=23% Similarity=0.322 Sum_probs=162.6
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-----ccccccEEEEe
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP 519 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v~ 519 (1338)
++++|+++.|++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|+|
T Consensus 2 l~~~~l~~~~~~-~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~i~~~~ 80 (200)
T PRK13540 2 LDVIELDFDYHD-QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKKDLCTYQKQLCFVG 80 (200)
T ss_pred EEEEEEEEEeCC-eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCccccCHHHHHhheEEec
Confidence 789999999864 679999999999999999999999999999999999999999999999865 12356799999
Q ss_pred cCCCCC-CCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000711 520 QRPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1338)
Q Consensus 520 Q~~~l~-~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1338)
|++.++ ..|++||+.++.... ..+.++.++++.+++.+..++.+ .+||||||||++||||++++|+
T Consensus 81 q~~~~~~~~tv~~~~~~~~~~~-----~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~~rv~laral~~~p~ 147 (200)
T PRK13540 81 HRSGINPYLTLRENCLYDIHFS-----PGAVGITELCRLFSLEHLIDYPC--------GLLSSGQKRQVALLRLWMSKAK 147 (200)
T ss_pred cccccCcCCCHHHHHHHHHhcC-----cchHHHHHHHHHcCCchhhhCCh--------hhcCHHHHHHHHHHHHHhcCCC
Confidence 999885 579999998763211 12346788999999887666543 5799999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHhhcceEEE
Q 000711 599 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLS 646 (1338)
Q Consensus 599 illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~~~d~i~~ 646 (1338)
++||||||++||+.+.+.+.+.+++ .|.|+|++||+.+.+..+|.-++
T Consensus 148 ~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 148 LWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred EEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 9999999999999999999998874 48999999999999988887553
No 327
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=6.4e-35 Score=320.94 Aligned_cols=203 Identities=22% Similarity=0.255 Sum_probs=161.8
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcc--c--cCCcccEE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE--E--AGSGCGIF 1175 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~--~--~~lr~~i~ 1175 (1338)
|+++||++.|++ .++|+|+||+|+|||++||+||||||||||+++|.|+++|++|+|.++|.++.. . ...+++++
T Consensus 1 l~~~~l~~~~~~-~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 79 (213)
T cd03262 1 IEIKNLHKSFGD-FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKVG 79 (213)
T ss_pred CEEEEEEEEECC-eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcce
Confidence 578999999975 579999999999999999999999999999999999999999999999998843 1 22355799
Q ss_pred EEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccC
Q 000711 1176 YVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1338)
Q Consensus 1176 ~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 1254 (1338)
||||+|.+|. .|++||+.++..... +. ..+..+..+.++++.+++....++. ..
T Consensus 80 ~~~q~~~~~~~~t~~e~l~~~~~~~~---------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~ 134 (213)
T cd03262 80 MVFQQFNLFPHLTVLENITLAPIKVK---------GM------SKAEAEERALELLEKVGLADKADAY----------PA 134 (213)
T ss_pred EEecccccCCCCcHHHHHHhHHHHhc---------CC------CHHHHHHHHHHHHHHcCCHhHhhhC----------cc
Confidence 9999999986 699999975421000 00 0000122345566666664433332 24
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
+||||||||++||||++++|++|||||||++||+++.+.+.+.+++ .++|+|+++|+++.+ +++|++++|.+|+
T Consensus 135 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~ 212 (213)
T cd03262 135 QLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGR 212 (213)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCc
Confidence 6999999999999999999999999999999999999888776643 489999999999876 6799999997653
No 328
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-35 Score=324.76 Aligned_cols=197 Identities=23% Similarity=0.350 Sum_probs=167.7
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----cccccEEEEec
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 520 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~Q 520 (1338)
|+++|+++.|++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+||
T Consensus 1 l~~~~l~~~~~~-~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 79 (232)
T cd03300 1 IELENVSKFYGG-FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTVFQ 79 (232)
T ss_pred CEEEeEEEEeCC-eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEEec
Confidence 468999999864 6899999999999999999999999999999999999999999999998641 12467999999
Q ss_pred CCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000711 521 RPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1338)
Q Consensus 521 ~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1338)
++.++.+ |++||+.++...........++++.++++.++++++.++.+ ..||||||||++||||++.+|++
T Consensus 80 ~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~lS~G~~qrl~laral~~~p~l 151 (232)
T cd03300 80 NYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP--------SQLSGGQQQRVAIARALVNEPKV 151 (232)
T ss_pred ccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 9998865 99999986432110001112456778899999998888776 68999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 600 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 600 llLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
+||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .+|++++++++
T Consensus 152 lllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G 207 (232)
T cd03300 152 LLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKG 207 (232)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECC
Confidence 999999999999999999988754 3899999999999874 69999999863
No 329
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-35 Score=336.24 Aligned_cols=205 Identities=19% Similarity=0.246 Sum_probs=163.8
Q ss_pred ceEEeeeEEeCCCc----cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc------c
Q 000711 1099 SISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------A 1168 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~----~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~------~ 1168 (1338)
.|+++||++.|++. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... .
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 37899999999742 4799999999999999999999999999999999999999999999999998642 2
Q ss_pred CCcccEEEEcCCC--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCch-hhhhhhccc
Q 000711 1169 GSGCGIFYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLEREEVG 1245 (1338)
Q Consensus 1169 ~lr~~i~~VpQdP--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~-~~i~~~~~G 1245 (1338)
..|++|+||||+| .+|..|+++||.++... .+.. .+..++.+.++++.++|. +..++
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~----------~~~~------~~~~~~~~~~~l~~~gL~~~~~~~---- 141 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKN----------FKMN------LDEVKNYAHRLLMDLGFSRDVMSQ---- 141 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHH----------cCCC------HHHHHHHHHHHHHHcCCChhhhhC----
Confidence 3456899999998 68889999999753110 0000 000122345566666663 22211
Q ss_pred CcccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccc
Q 000711 1246 WDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSL 1320 (1338)
Q Consensus 1246 ldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~ 1320 (1338)
...+||||||||++|||||+.+|++|||||||++||+.+...+.+++++ .|+|||+|+|+++.+ +++|+
T Consensus 142 ------~~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dr 215 (286)
T PRK13646 142 ------SPFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADE 215 (286)
T ss_pred ------CcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCE
Confidence 2467999999999999999999999999999999999999888776643 489999999999865 68999
Q ss_pred eEEEecCCC
Q 000711 1321 ELRLIDGEG 1329 (1338)
Q Consensus 1321 ~l~l~~g~g 1329 (1338)
+++|.+|+-
T Consensus 216 i~~l~~G~i 224 (286)
T PRK13646 216 VIVMKEGSI 224 (286)
T ss_pred EEEEECCEE
Confidence 999987754
No 330
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-35 Score=328.07 Aligned_cols=197 Identities=24% Similarity=0.296 Sum_probs=163.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCC------cccc
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVG------SDLN 512 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~------~~~~ 512 (1338)
.++++||++.|++ +++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+ ..++
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 81 (250)
T PRK14247 3 KIEIRDLKVSFGQ-VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELR 81 (250)
T ss_pred eEEEEeeEEEECC-eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHh
Confidence 4899999999864 6799999999999999999999999999999999999974 69999999864 1245
Q ss_pred ccEEEEecCCCC-CCCCHHHHhcCCCCCCcc--cCCCCHHHHHHHHHHcCCchH----HhcCCCCccccCCCCCChhHHH
Q 000711 513 KEIFYVPQRPYT-AVGTLRDQLIYPLTSDQE--VEPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQQ 585 (1338)
Q Consensus 513 ~~i~~v~Q~~~l-~~~tl~eni~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGqkQ 585 (1338)
+.++|+||+|.+ +..|++||+.++...... .....++++.++++.+++.+. .++. ..+|||||||
T Consensus 82 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LSgG~~q 153 (250)
T PRK14247 82 RRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAP--------AGKLSGGQQQ 153 (250)
T ss_pred ccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCC--------cccCCHHHHH
Confidence 689999999975 467999999875321110 001123567888999998643 3332 2689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 586 RlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
|++|||||+++|++++|||||++||+.+...+.+.+++ .++|+|++||+++.+ ..+|++++|++
T Consensus 154 rv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 220 (250)
T PRK14247 154 RLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYK 220 (250)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 99999999999999999999999999999999998875 378999999999987 57999999986
No 331
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-35 Score=319.70 Aligned_cols=200 Identities=21% Similarity=0.235 Sum_probs=161.5
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcC
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQ 1179 (1338)
|+++|+++.|++. . .|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++......+++++|+||
T Consensus 1 i~~~~l~~~~~~~-~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 77 (211)
T cd03298 1 VRLDKIRFSYGEQ-P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLFQ 77 (211)
T ss_pred CEEEeEEEEeCCE-e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEec
Confidence 5789999998653 2 399999999999999999999999999999999999999999999988765434557999999
Q ss_pred CCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCCh
Q 000711 1180 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1338)
Q Consensus 1180 dP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 1258 (1338)
+|.+|.+ |++||+.++..... . .....++.+.++++.+++.....+. ...||+
T Consensus 78 ~~~~~~~~tv~enl~~~~~~~~---------~-------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 131 (211)
T cd03298 78 ENNLFAHLTVEQNVGLGLSPGL---------K-------LTAEDRQAIEVALARVGLAGLEKRL----------PGELSG 131 (211)
T ss_pred ccccCCCCcHHHHHhccccccc---------C-------ccHHHHHHHHHHHHHcCCHHHHhCC----------cccCCH
Confidence 9999976 99999976432100 0 0000133456677777775443332 246999
Q ss_pred hHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1259 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1259 GQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
|||||++||||++++|+++||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+ +++|+++.|.+|+
T Consensus 132 G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~ 206 (211)
T cd03298 132 GERQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGR 206 (211)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCE
Confidence 999999999999999999999999999999999888776543 489999999999866 6799999997653
No 332
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-35 Score=337.20 Aligned_cols=199 Identities=25% Similarity=0.336 Sum_probs=166.3
Q ss_pred CcEEEEeEEEEcCC---------CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----
Q 000711 443 NYIEFSGVKVVTPT---------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---- 509 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~---------~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---- 509 (1338)
..|+++|+++.|+. ...+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+.
T Consensus 4 ~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~ 83 (327)
T PRK11308 4 PLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKAD 83 (327)
T ss_pred ceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCC
Confidence 36899999998863 24799999999999999999999999999999999999999999999999651
Q ss_pred -----cccccEEEEecCCC--CC-CCCHHHHhcCCCCCC-cccCCCCHHHHHHHHHHcCCc-hHHhcCCCCccccCCCCC
Q 000711 510 -----DLNKEIFYVPQRPY--TA-VGTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDEL 579 (1338)
Q Consensus 510 -----~~~~~i~~v~Q~~~--l~-~~tl~eni~~~~~~~-~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~L 579 (1338)
.++++|+||||+|. +. ..|+.+|+..+.... ........+++.++++.+++. +..++.| .+|
T Consensus 84 ~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p--------~~L 155 (327)
T PRK11308 84 PEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYP--------HMF 155 (327)
T ss_pred HHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCC--------ccC
Confidence 23567999999994 43 359999886532111 000112245678999999996 4667766 689
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 580 SLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 580 SgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|||||||++|||||+.+|++||+||||++||..+...+++.+++ .|.|+|+|||+++.+. .||+|++|.+
T Consensus 156 SgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~ 230 (327)
T PRK11308 156 SGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYL 230 (327)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999988754 3899999999999986 6999999986
No 333
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-35 Score=334.21 Aligned_cols=204 Identities=18% Similarity=0.273 Sum_probs=164.3
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcc--c--cCCcccE
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE--E--AGSGCGI 1174 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~--~--~~lr~~i 1174 (1338)
-|+++||++.|++.+++|+|+||+|++||.+||+|+||||||||+++|.|+++|.+|+|.++|.++.. . ...+.++
T Consensus 5 ~l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~i 84 (283)
T PRK13636 5 ILKVEELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRESV 84 (283)
T ss_pred eEEEEeEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhhE
Confidence 58999999999756779999999999999999999999999999999999999999999999998842 1 2345679
Q ss_pred EEEcCCC--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcc
Q 000711 1175 FYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 1252 (1338)
Q Consensus 1175 ~~VpQdP--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~ 1252 (1338)
+||||+| .+|+.|+++|+.++... .+. ..+..+..+.++++.++|....++ .
T Consensus 85 g~v~q~~~~~~~~~tv~e~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~gL~~~~~~----------~ 138 (283)
T PRK13636 85 GMVFQDPDNQLFSASVYQDVSFGAVN----------LKL------PEDEVRKRVDNALKRTGIEHLKDK----------P 138 (283)
T ss_pred EEEecCcchhhccccHHHHHHhHHHH----------cCC------CHHHHHHHHHHHHHHCCChhhhhC----------C
Confidence 9999999 67899999999753110 000 000011234556677777543322 2
Q ss_pred cCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEecC
Q 000711 1253 EDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDG 1327 (1338)
Q Consensus 1253 g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~~g 1327 (1338)
..+||||||||++|||||+++|++|||||||++||+++.+.+.+++++ .|+|||+|+|+++.+ +++|+++.|.+|
T Consensus 139 ~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G 218 (283)
T PRK13636 139 THCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEG 218 (283)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 457999999999999999999999999999999999999877665532 389999999999876 489999999776
Q ss_pred C
Q 000711 1328 E 1328 (1338)
Q Consensus 1328 ~ 1328 (1338)
+
T Consensus 219 ~ 219 (283)
T PRK13636 219 R 219 (283)
T ss_pred E
Confidence 5
No 334
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.1e-34 Score=320.93 Aligned_cols=192 Identities=28% Similarity=0.298 Sum_probs=166.1
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc--cccccEEEEecCC
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--DLNKEIFYVPQRP 522 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~--~~~~~i~~v~Q~~ 522 (1338)
++++||++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .-.+.++|+||++
T Consensus 1 l~l~~v~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~~~~~~~~~q~~ 79 (223)
T TIGR03740 1 LETKNLSKRFG-KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKDLHKIGSLIESP 79 (223)
T ss_pred CEEEeEEEEEC-CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccccccEEEEcCCC
Confidence 46899999986 46899999999999999999999999999999999999999999999998641 1124799999999
Q ss_pred CCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000711 523 YTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAI 601 (1338)
Q Consensus 523 ~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ill 601 (1338)
.++. .|++||+.++.... ...+.++.++++.+++++..++.+ .+||||||||++||||++.+|++++
T Consensus 80 ~~~~~~t~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~~rv~laral~~~p~lll 147 (223)
T TIGR03740 80 PLYENLTARENLKVHTTLL----GLPDSRIDEVLNIVDLTNTGKKKA--------KQFSLGMKQRLGIAIALLNHPKLLI 147 (223)
T ss_pred CccccCCHHHHHHHHHHHc----CCCHHHHHHHHHHcCCcHHHhhhH--------hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8765 69999997643211 123567888999999998877755 6899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 602 LDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 602 LDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
|||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..+|++++|++
T Consensus 148 lDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 199 (223)
T TIGR03740 148 LDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISE 199 (223)
T ss_pred ECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeC
Confidence 9999999999999999998764 478999999999987 57999999976
No 335
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=4.6e-35 Score=342.18 Aligned_cols=203 Identities=21% Similarity=0.260 Sum_probs=168.2
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEc
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~Vp 1178 (1338)
.|+++||++.|++ ..+|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++......+++++|||
T Consensus 4 ~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~v~ 82 (353)
T TIGR03265 4 YLSIDNIRKRFGA-FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGIVF 82 (353)
T ss_pred EEEEEEEEEEeCC-eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 5899999999975 569999999999999999999999999999999999999999999999999977643455799999
Q ss_pred CCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1179 QRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1179 QdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
|++.||+ .|++|||.|+.... +. .....+..+.++++.++|..+.++. ..+||
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~~----------~~------~~~~~~~~~~~~l~~l~L~~~~~~~----------~~~LS 136 (353)
T TIGR03265 83 QSYALFPNLTVADNIAYGLKNR----------GM------GRAEVAERVAELLDLVGLPGSERKY----------PGQLS 136 (353)
T ss_pred CCcccCCCCcHHHHHHHHHHhc----------CC------CHHHHHHHHHHHHHHcCCCchhhCC----------hhhCC
Confidence 9999996 69999998763210 00 0000133456677888876655443 35699
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHH----hcCCeEEEeccCCC-CcccccceEEEecCC
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPA-LIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~----~~~~TvI~IAHRl~-~i~~~d~~l~l~~g~ 1328 (1338)
||||||+||||||+++|++|+||||||+||..+.+.+.+.++ +.++|+|.|+|+.+ ....+|++++|.+|+
T Consensus 137 gGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~ 212 (353)
T TIGR03265 137 GGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGV 212 (353)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999887766553 34899999999997 468899999998764
No 336
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-35 Score=326.91 Aligned_cols=194 Identities=21% Similarity=0.248 Sum_probs=160.8
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEc
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~Vp 1178 (1338)
.|+++||++.|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++.. .+.+++|+|
T Consensus 12 ~l~i~~l~~~~~~-~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~---~~~~i~~v~ 87 (257)
T PRK11247 12 PLLLNAVSKRYGE-RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAE---AREDTRLMF 87 (257)
T ss_pred cEEEEEEEEEECC-cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHH---hhCceEEEe
Confidence 5999999999964 579999999999999999999999999999999999999999999999977643 345799999
Q ss_pred CCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1179 QRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1179 QdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
|+|.+|+ .|++||+.++.... .+..+.++++.+++.+..++. ..+||
T Consensus 88 q~~~l~~~~tv~enl~~~~~~~----------------------~~~~~~~~l~~~gl~~~~~~~----------~~~LS 135 (257)
T PRK11247 88 QDARLLPWKKVIDNVGLGLKGQ----------------------WRDAALQALAAVGLADRANEW----------PAALS 135 (257)
T ss_pred cCccCCCCCcHHHHHHhcccch----------------------HHHHHHHHHHHcCChhHhcCC----------hhhCC
Confidence 9999987 69999997643110 122344566666664433221 35799
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
||||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++.+ +++|+++.|.+|+
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~ 211 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGK 211 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999887766532 489999999999864 6799999997654
No 337
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.6e-35 Score=338.87 Aligned_cols=185 Identities=25% Similarity=0.277 Sum_probs=157.8
Q ss_pred CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-----cccccEEEEecCCCCCCC-CHH
Q 000711 457 GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-----DLNKEIFYVPQRPYTAVG-TLR 530 (1338)
Q Consensus 457 ~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-----~~~~~i~~v~Q~~~l~~~-tl~ 530 (1338)
++++|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. .++++++|+||++.++.. |++
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHH
Confidence 46799999999999999999999999999999999999999999999998641 235679999999988765 999
Q ss_pred HHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCC
Q 000711 531 DQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVT 610 (1338)
Q Consensus 531 eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD 610 (1338)
||+.+............++++.++++.+++.+..++.+ .+||||||||++|||||+++|+++||||||++||
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD 156 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEAADRPV--------GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLD 156 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhCCch--------hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCC
Confidence 99987422111001112346788999999988777755 6899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 611 TDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 611 ~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
+.+.+.+++.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 157 ~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~ 199 (302)
T TIGR01188 157 PRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDH 199 (302)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEEC
Confidence 9999999988764 4899999999999875 7999999986
No 338
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=324.17 Aligned_cols=196 Identities=18% Similarity=0.225 Sum_probs=163.2
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-------cccccEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~ 516 (1338)
.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++
T Consensus 5 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (237)
T PRK11614 5 MLSFDKVSAHYG-KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAVA 83 (237)
T ss_pred EEEEEeEEEeeC-CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCEE
Confidence 589999999986 46899999999999999999999999999999999999999999999999641 1345799
Q ss_pred EEecCCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHc-CCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 517 YVPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNV-DLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 517 ~v~Q~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~-~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
|+||++.++.. |++||+.++..... ....++++.++++.+ ++.+..++.+ ..||||||||++||||++
T Consensus 84 ~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~ 153 (237)
T PRK11614 84 IVPEGRRVFSRMTVEENLAMGGFFAE--RDQFQERIKWVYELFPRLHERRIQRA--------GTMSGGEQQMLAIGRALM 153 (237)
T ss_pred EeccCcccCCCCcHHHHHHHhhhccC--hhHHHHHHHHHHHHHHHHHHHHhCch--------hhCCHHHHHHHHHHHHHH
Confidence 99999988874 99999987542110 011233456666666 4655555433 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ +.+|++++|+++
T Consensus 154 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G 213 (237)
T PRK11614 154 SQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENG 213 (237)
T ss_pred hCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCC
Confidence 99999999999999999999999888754 489999999999865 689999999863
No 339
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-35 Score=342.12 Aligned_cols=203 Identities=24% Similarity=0.286 Sum_probs=164.0
Q ss_pred eEEeeeEEeCC--C-ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-----CCc
Q 000711 1100 ISFSKLDIITP--S-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSG 1171 (1338)
Q Consensus 1100 I~f~nV~f~yp--~-~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~-----~lr 1171 (1338)
|+++||+++|+ + ..++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++.... ..|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997 2 467999999999999999999999999999999999999999999999999987652 235
Q ss_pred ccEEEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC
Q 000711 1172 CGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1338)
Q Consensus 1172 ~~i~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 1250 (1338)
++|+||||+|.+|. .|+++|+.++... .+.. ....++.+.++++.++|.+..++.
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~----------~~~~------~~~~~~~~~~~l~~~gL~~~~~~~-------- 137 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLEL----------AGTP------KAEIKARVTELLELVGLSDKADRY-------- 137 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHcCCchhhhCC--------
Confidence 67999999999986 6999999764210 0000 000123455667777775433322
Q ss_pred cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEe
Q 000711 1251 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLI 1325 (1338)
Q Consensus 1251 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~ 1325 (1338)
..+||||||||++|||||+++|+|||||||||+||+.+.+.+.+.+++ .|+|+|+|+|+++.+ +++|+++.|.
T Consensus 138 --~~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~ 215 (343)
T PRK11153 138 --PAQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVID 215 (343)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999888776643 389999999999865 5799999997
Q ss_pred cCC
Q 000711 1326 DGE 1328 (1338)
Q Consensus 1326 ~g~ 1328 (1338)
+|+
T Consensus 216 ~G~ 218 (343)
T PRK11153 216 AGR 218 (343)
T ss_pred CCE
Confidence 654
No 340
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-35 Score=331.09 Aligned_cols=204 Identities=22% Similarity=0.315 Sum_probs=165.4
Q ss_pred ceEEeeeEEeCCC-ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEE
Q 000711 1099 SISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIF 1175 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~-~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~ 1175 (1338)
.|+++|+++.|++ .+++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++... ...|.+++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 5899999999974 56899999999999999999999999999999999999999999999999998754 23456799
Q ss_pred EEcCCC--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCccc
Q 000711 1176 YVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1338)
Q Consensus 1176 ~VpQdP--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 1253 (1338)
|+||+| .++..|++|||.++... .+. ..+...+.+.++++.+++....++. .
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~ 140 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLEN----------KKV------PPKKMKDIIDDLAKKVGMEDYLDKE----------P 140 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHH----------cCC------CHHHHHHHHHHHHHHcCCHHHhhCC----------c
Confidence 999999 45678999999753110 000 0000122345566777775444332 2
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---c-CCeEEEeccCCCCcccccceEEEecCC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---M-GITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~-~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
.+||||||||++||||++++|++|||||||++||..+.+.+.+++++ . ++|+|+++|+++.+..+|+++.|.+|.
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~ 219 (271)
T PRK13632 141 QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGK 219 (271)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCE
Confidence 57999999999999999999999999999999999999888777643 2 589999999998888999999997765
No 341
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=7.3e-35 Score=340.48 Aligned_cols=207 Identities=22% Similarity=0.315 Sum_probs=167.5
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEc
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~Vp 1178 (1338)
.|+++||++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++......+++|+|||
T Consensus 2 ~L~i~~l~~~~~~-~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v~ 80 (353)
T PRK10851 2 SIEIANIKKSFGR-TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVF 80 (353)
T ss_pred EEEEEEEEEEeCC-eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEEe
Confidence 3789999999975 569999999999999999999999999999999999999999999999999977644455799999
Q ss_pred CCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1179 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1179 QdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
|+|.+|+. |++||+.|+..... ..... ..+..++.+.++++.++|..+.++. ...||
T Consensus 81 Q~~~l~p~~tv~eni~~~~~~~~----------~~~~~--~~~~~~~~~~~~l~~~~L~~~~~~~----------~~~LS 138 (353)
T PRK10851 81 QHYALFRHMTVFDNIAFGLTVLP----------RRERP--NAAAIKAKVTQLLEMVQLAHLADRY----------PAQLS 138 (353)
T ss_pred cCcccCCCCcHHHHHHhhhhhcc----------cccCC--CHHHHHHHHHHHHHHcCCchhhhCC----------hhhCC
Confidence 99999974 99999987632100 00000 0001133456677777775544333 35799
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCC-CcccccceEEEecCC
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPA-LIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~-~i~~~d~~l~l~~g~ 1328 (1338)
||||||++|||||+++|++|+||||||+||..+.+.+.+.+++ .++|+|+|+|+++ ...++|+++.|.+|+
T Consensus 139 gGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~ 214 (353)
T PRK10851 139 GGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGN 214 (353)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999877665532 4899999999997 577899999997764
No 342
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=8.8e-35 Score=324.63 Aligned_cols=202 Identities=19% Similarity=0.288 Sum_probs=161.2
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-CCcccEEEEc
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-GSGCGIFYVP 1178 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~-~lr~~i~~Vp 1178 (1338)
|+++|+++.|++ +++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.... ..+++++|+|
T Consensus 2 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~~~ 80 (236)
T TIGR03864 2 LEVAGLSFAYGA-RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGVVF 80 (236)
T ss_pred EEEEeeEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEEeC
Confidence 689999999974 57999999999999999999999999999999999999999999999999886542 2234799999
Q ss_pred CCCCC-CCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1179 QRPYT-CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1179 QdP~L-F~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
|+|.+ +..|+++|+.++.... +. ......+.+.++++.+++....+. ....||
T Consensus 81 q~~~~~~~~t~~~~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~gl~~~~~~----------~~~~LS 134 (236)
T TIGR03864 81 QQPTLDLDLSVRQNLRYHAALH----------GL------SRAEARERIAALLARLGLAERADD----------KVRELN 134 (236)
T ss_pred CCCCCcccCcHHHHHHHHHHhc----------CC------CHHHHHHHHHHHHHHcCChhhhcC----------ChhhCC
Confidence 99988 5689999996531100 00 000012234556666666432221 234799
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
||||||++||||++++|+++||||||++||.++.+.+.+.+++ .|+|+|+|+|+++.+..+|+++.|.+|+
T Consensus 135 ~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~ 209 (236)
T TIGR03864 135 GGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGR 209 (236)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCe
Confidence 9999999999999999999999999999999999888776542 4899999999999888899999997664
No 343
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.5e-35 Score=295.56 Aligned_cols=197 Identities=26% Similarity=0.358 Sum_probs=167.3
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 517 (1338)
+|+.+|+++.- .++.+++++||++++||.++|+||||+|||||+|+|+|+..|++|++.++|.+ .++.++-++
T Consensus 1 mi~a~nls~~~-~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 1 MIRAENLSYSL-AGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred CeeeeeeEEEe-ecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 37889999876 46889999999999999999999999999999999999999999999999986 234567899
Q ss_pred EecCCCC-CCCCHHHHhcCCCCCCcccCCCCHHH--HHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 518 VPQRPYT-AVGTLRDQLIYPLTSDQEVEPLTHGG--MVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 518 v~Q~~~l-~~~tl~eni~~~~~~~~~~~~~~~~~--~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
+||+..+ |+.|++|-+.+|...........+++ ..+++..+++..+..+.- ..||||||||+.|||+|.
T Consensus 80 lpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~y--------~~LSGGEqQRVqlARvLa 151 (259)
T COG4559 80 LPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGRDY--------RTLSGGEQQRVQLARVLA 151 (259)
T ss_pred cccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhccch--------hhcCchHHHHHHHHHHHH
Confidence 9999865 88899999999865432211212223 678899999999988854 589999999999999997
Q ss_pred c------CCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 595 H------KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 595 ~------~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
+ ++++|+||||||+||......+++..++ .|..|+.|-||+++. .+||+|++|.+
T Consensus 152 Ql~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~ 216 (259)
T COG4559 152 QLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQ 216 (259)
T ss_pred HccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeC
Confidence 5 4569999999999999999888887764 588999999999986 59999999986
No 344
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-35 Score=319.44 Aligned_cols=200 Identities=23% Similarity=0.298 Sum_probs=160.5
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcC
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQ 1179 (1338)
|+++|+++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.. ..+.+++|+||
T Consensus 1 l~~~~l~~~~~~-~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~~~~~i~~~~q 77 (210)
T cd03269 1 LEVENVTKRFGR-VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI--AARNRIGYLPE 77 (210)
T ss_pred CEEEEEEEEECC-EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH--HHHccEEEecc
Confidence 578999998864 579999999999999999999999999999999999999999999999998864 23457999999
Q ss_pred CCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCCh
Q 000711 1180 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1338)
Q Consensus 1180 dP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 1258 (1338)
+|.+|.+ |++||+.++.. ..+.. ....++.+.++++.+++...... ...+|||
T Consensus 78 ~~~~~~~~tv~e~l~~~~~----------~~~~~------~~~~~~~~~~~l~~~~l~~~~~~----------~~~~LS~ 131 (210)
T cd03269 78 ERGLYPKMKVIDQLVYLAQ----------LKGLK------KEEARRRIDEWLERLELSEYANK----------RVEELSK 131 (210)
T ss_pred CCcCCcCCcHHHHHHHHHH----------HcCCC------hHHHHHHHHHHHHHcCChHHHhC----------cHhhCCH
Confidence 9999975 99999864210 00000 00012345566666666433322 1346999
Q ss_pred hHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1259 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1259 GQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
|||||++||||++++|+++||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+ +++|+++.|.+|+
T Consensus 132 G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 205 (210)
T cd03269 132 GNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGR 205 (210)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCE
Confidence 999999999999999999999999999999999888776643 489999999999865 6799999997654
No 345
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=328.34 Aligned_cols=204 Identities=21% Similarity=0.214 Sum_probs=166.7
Q ss_pred CCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC-----CCccEEEeCCCCc-------
Q 000711 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS------- 509 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~------- 509 (1338)
...++++||++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 18 ~~~l~~~nl~~~~~-~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 18 EIALSTKDLHVYYG-KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred CeEEEEeeEEEEEC-CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 45799999999995 4789999999999999999999999999999999999996 5899999998641
Q ss_pred -cccccEEEEecCCCCCCCCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHH
Q 000711 510 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRL 587 (1338)
Q Consensus 510 -~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRl 587 (1338)
..++.++|+||++.++..|++||+.++...... .....++++.++++.+++.+.++... .....+||||||||+
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~----~~~~~~LS~G~~qrl 172 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDL----HKSALTLSGGQQQRL 172 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhh----cCCcccCCHHHHHHH
Confidence 135679999999998889999999876321110 01112355778889998864322110 011368999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 588 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 588 alARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
+||||++++|+++||||||++||+.+...+.+.+++ .+.|+|++||+++.+ ..||++++|+++
T Consensus 173 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G 238 (267)
T PRK14237 173 CIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLG 238 (267)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECC
Confidence 999999999999999999999999999999988765 378999999999887 579999999863
No 346
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=3.2e-34 Score=321.45 Aligned_cols=185 Identities=31% Similarity=0.422 Sum_probs=162.8
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCccccccEEEEecCCC
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPY 523 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~ 523 (1338)
.++++||++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+++ +..++|+||++.
T Consensus 4 ~l~~~~l~~~~~-~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----~~~i~~v~q~~~ 77 (251)
T PRK09544 4 LVSLENVSVSFG-QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----KLRIGYVPQKLY 77 (251)
T ss_pred EEEEeceEEEEC-CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----ccCEEEeccccc
Confidence 589999999996 46799999999999999999999999999999999999999999999987 346999999987
Q ss_pred CCC---CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000711 524 TAV---GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFA 600 (1338)
Q Consensus 524 l~~---~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~il 600 (1338)
++. .|+++|+.+.. ...++++.++++.+++.+..++.+ ..||||||||++||||++++|+++
T Consensus 78 ~~~~l~~~~~~~~~~~~-------~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgGq~qrv~laral~~~p~ll 142 (251)
T PRK09544 78 LDTTLPLTVNRFLRLRP-------GTKKEDILPALKRVQAGHLIDAPM--------QKLSGGETQRVLLARALLNRPQLL 142 (251)
T ss_pred cccccChhHHHHHhccc-------cccHHHHHHHHHHcCChHHHhCCh--------hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 654 38888876421 123567888999999998887755 689999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHc---c-CCeEEEEecChhhH-hhcceEEEccC
Q 000711 601 ILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 601 lLDEpts~LD~~~~~~i~~~l~~---~-~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
||||||++||+.+...+++.+++ . |+|+|++||+++.+ ..+|++++|++
T Consensus 143 lLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~ 196 (251)
T PRK09544 143 VLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH 196 (251)
T ss_pred EEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC
Confidence 99999999999999999888753 2 89999999999987 57999999964
No 347
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.1e-34 Score=329.21 Aligned_cols=198 Identities=25% Similarity=0.353 Sum_probs=163.4
Q ss_pred cEEEEeEEEEcCC--------CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------
Q 000711 444 YIEFSGVKVVTPT--------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------ 509 (1338)
Q Consensus 444 ~i~~~~v~~~~~~--------~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------ 509 (1338)
.|+++||++.|+. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 6899999998852 24799999999999999999999999999999999999999999999998641
Q ss_pred cccccEEEEecCCC--CC-CCCHHHHhcCCCCCCc-ccCCCCHHHHHHHHHHcCCc-hHHhcCCCCccccCCCCCChhHH
Q 000711 510 DLNKEIFYVPQRPY--TA-VGTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQ 584 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~~--l~-~~tl~eni~~~~~~~~-~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqk 584 (1338)
..++.++|+||+|. ++ ..|+.+|+.++..... ......++++.++++.+++. +..++.+ .+||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LS~G~~ 155 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYP--------HMLAPGQK 155 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCc--------hhcCHHHH
Confidence 12357999999984 33 3489999876422110 00111235678899999994 5555544 68999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 585 QRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
||++||||++++|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 156 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~ 225 (267)
T PRK15112 156 QRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQ 225 (267)
T ss_pred HHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 999999999999999999999999999999999988764 3889999999999886 5999999986
No 348
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=326.22 Aligned_cols=198 Identities=25% Similarity=0.289 Sum_probs=164.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC-----CCccEEEeCCCCc--------c
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS--------D 510 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~--------~ 510 (1338)
.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+. .
T Consensus 4 ~l~~~~l~~~~~-~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~ 82 (251)
T PRK14251 4 IISAKDVHLSYG-NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVE 82 (251)
T ss_pred eEEEEeeEEEEC-CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHH
Confidence 589999999996 4689999999999999999999999999999999999997 4899999998641 2
Q ss_pred ccccEEEEecCCCCCCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCch----HHhcCCCCccccCCCCCChhHHH
Q 000711 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQQ 585 (1338)
Q Consensus 511 ~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGqkQ 585 (1338)
+++.++|++|++.++..|++||+.++....... ....++++.++++.+++.. ..++. ..+|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LS~Gq~q 154 (251)
T PRK14251 83 LRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRN--------AQAFSGGQQQ 154 (251)
T ss_pred hhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccC--------hhhCCHHHHH
Confidence 356799999999998899999998753211100 0112345677888888842 22332 3689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 586 RlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
|++||||++++|+++||||||++||+.+.+.+.+.+++ .+.|+|+|||+++.+. .+|++++|+++
T Consensus 155 r~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G 222 (251)
T PRK14251 155 RICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNG 222 (251)
T ss_pred HHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECC
Confidence 99999999999999999999999999999999998875 3789999999999865 69999999863
No 349
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-35 Score=324.62 Aligned_cols=203 Identities=22% Similarity=0.289 Sum_probs=163.5
Q ss_pred eEEeeeEEeCCCc---cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-----CCc
Q 000711 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSG 1171 (1338)
Q Consensus 1100 I~f~nV~f~yp~~---~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~-----~lr 1171 (1338)
|+++|+++.|++. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.... ..+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 6899999999754 27999999999999999999999999999999999999999999999999887542 124
Q ss_pred ccEEEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC
Q 000711 1172 CGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1338)
Q Consensus 1172 ~~i~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 1250 (1338)
++++|+||+|.+|. .|++||+.++... .+.. ....++.+.++++.+++....++.
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~~~~~-------- 137 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEI----------AGVP------KAEIEERVLELLELVGLEDKADAY-------- 137 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHCCChhhhhcC--------
Confidence 57999999999997 6999999643110 0000 000123455667777765443322
Q ss_pred cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEe
Q 000711 1251 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLI 1325 (1338)
Q Consensus 1251 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~ 1325 (1338)
...||||||||++||||++++|++|||||||++||.++.+.+.+.+++ .|+|+|+|+|+++.+ +++|+++.|.
T Consensus 138 --~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 138 --PAQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999888776543 389999999999875 5799999997
Q ss_pred cCC
Q 000711 1326 DGE 1328 (1338)
Q Consensus 1326 ~g~ 1328 (1338)
+|+
T Consensus 216 ~G~ 218 (233)
T cd03258 216 KGE 218 (233)
T ss_pred CCE
Confidence 664
No 350
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.9e-34 Score=316.60 Aligned_cols=195 Identities=23% Similarity=0.303 Sum_probs=165.8
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc---cccccEEEEe
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---DLNKEIFYVP 519 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---~~~~~i~~v~ 519 (1338)
..++++|+++.|+ ++++++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|++
T Consensus 10 ~~l~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~~~~~~i~~~~ 88 (214)
T PRK13543 10 PLLAAHALAFSRN-EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRGDRSRFMAYLG 88 (214)
T ss_pred ceEEEeeEEEecC-CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccchhhhhceEEee
Confidence 4699999999986 45799999999999999999999999999999999999999999999998641 2345699999
Q ss_pred cCCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000711 520 QRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1338)
Q Consensus 520 Q~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1338)
|++.++.. |++||+.++..... ...++.+.++++.+++.+..++.+ ..||||||||++||||++++|+
T Consensus 89 q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~~p~ 157 (214)
T PRK13543 89 HLPGLKADLSTLENLHFLCGLHG---RRAKQMPGSALAIVGLAGYEDTLV--------RQLSAGQKKRLALARLWLSPAP 157 (214)
T ss_pred cCcccccCCcHHHHHHHHHHhcC---CcHHHHHHHHHHHcCChhhccCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 99988775 99999976432111 112345678889999887766654 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 599 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 599 illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
+++|||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..+|++++++.
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 158 LWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 9999999999999999999888754 489999999999977 58899998863
No 351
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-35 Score=333.61 Aligned_cols=204 Identities=21% Similarity=0.218 Sum_probs=162.8
Q ss_pred eEEeeeEEeCCCc----cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc------cC
Q 000711 1100 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------AG 1169 (1338)
Q Consensus 1100 I~f~nV~f~yp~~----~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~------~~ 1169 (1338)
|+|+||++.|+.. +++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++... ..
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 7899999999743 3699999999999999999999999999999999999999999999999998531 22
Q ss_pred CcccEEEEcCCC--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCch-hhhhhhcccC
Q 000711 1170 SGCGIFYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLEREEVGW 1246 (1338)
Q Consensus 1170 lr~~i~~VpQdP--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~-~~i~~~~~Gl 1246 (1338)
.|.+++||+|+| .+|..|+.+|+.++... .+. .....+..+.++++.++|. .+..+
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~~L~~~~~~~----- 140 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQN----------FGI------PKEKAEKIAAEKLEMVGLADEFWEK----- 140 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHH----------cCC------CHHHHHHHHHHHHHHcCCChhhccC-----
Confidence 456799999998 78999999999753110 000 0000123345566666663 22222
Q ss_pred cccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceE
Q 000711 1247 DANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLEL 1322 (1338)
Q Consensus 1247 dt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l 1322 (1338)
....||||||||++|||||+.+|++|||||||++||+++...+.+.+++ .|+|||+|+|+++.+ .++|+++
T Consensus 141 -----~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 141 -----SPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred -----CcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEE
Confidence 1357999999999999999999999999999999999999888776543 489999999999865 7899999
Q ss_pred EEecCCC
Q 000711 1323 RLIDGEG 1329 (1338)
Q Consensus 1323 ~l~~g~g 1329 (1338)
+|.+|+-
T Consensus 216 ~l~~G~i 222 (288)
T PRK13643 216 LLEKGHI 222 (288)
T ss_pred EEECCEE
Confidence 9977653
No 352
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=325.48 Aligned_cols=201 Identities=23% Similarity=0.253 Sum_probs=162.2
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcC
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQ 1179 (1338)
|+++|+++.|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++... +.+++|+||
T Consensus 2 l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~---~~~~~~v~q 77 (255)
T PRK11248 2 LQISHLYADYGG-KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP---GAERGVVFQ 77 (255)
T ss_pred EEEEEEEEEeCC-eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC---CCcEEEEeC
Confidence 689999999965 6799999999999999999999999999999999999999999999999987642 235899999
Q ss_pred CCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCCh
Q 000711 1180 RPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1338)
Q Consensus 1180 dP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 1258 (1338)
+|.+|. .|+++|+.++... .+.. ....+..+.++++.+++.....+. ..+|||
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~gl~~~~~~~----------~~~LSg 131 (255)
T PRK11248 78 NEGLLPWRNVQDNVAFGLQL----------AGVE------KMQRLEIAHQMLKKVGLEGAEKRY----------IWQLSG 131 (255)
T ss_pred CCccCCCCcHHHHHHhHHHH----------cCCC------HHHHHHHHHHHHHHcCChhHhhCC----------hhhCCH
Confidence 999887 6999999753210 0000 000123456677777775433221 356999
Q ss_pred hHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEecCCCC
Q 000711 1259 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGEGN 1330 (1338)
Q Consensus 1259 GQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~~g~g~ 1330 (1338)
|||||++||||++++|++|||||||++||.++.+.+.+.+++ .|+|+|+|+|+++.+ .++|+++.|.+|+|.
T Consensus 132 Gq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 132 GQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGR 208 (255)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcE
Confidence 999999999999999999999999999999999888776543 389999999999865 678999999765664
No 353
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=9e-34 Score=321.40 Aligned_cols=192 Identities=25% Similarity=0.389 Sum_probs=165.1
Q ss_pred CCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCccccccEEEEecC
Q 000711 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQR 521 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~ 521 (1338)
.+.|+++|+++. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|+||+
T Consensus 37 ~~~l~i~nls~~---~~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------~i~yv~q~ 106 (282)
T cd03291 37 DNNLFFSNLCLV---GAPVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------RISFSSQF 106 (282)
T ss_pred CCeEEEEEEEEe---cccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------EEEEEeCc
Confidence 457999999985 36799999999999999999999999999999999999999999999987 59999999
Q ss_pred CCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCC
Q 000711 522 PYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPK 598 (1338)
Q Consensus 522 ~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~ 598 (1338)
+++++.|++||+.++... ...++.++++.+++.+.++.++....+ ..+.+||||||||++|||||+.+|+
T Consensus 107 ~~l~~~tv~enl~~~~~~-------~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 107 SWIMPGTIKENIIFGVSY-------DEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred ccccccCHHHHhhccccc-------CHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 999999999999875321 223456777888888888776643221 2357899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHH-Hc--cCCeEEEEecChhhHhhcceEEEccCC
Q 000711 599 FAILDECTSAVTTDMEERFCAKV-RA--MGTSCITISHRPALVAFHDVVLSLDGE 650 (1338)
Q Consensus 599 illLDEpts~LD~~~~~~i~~~l-~~--~~~t~i~itH~~~~~~~~d~i~~l~~~ 650 (1338)
++||||||++||+.+...+.+.+ ++ .+.|+|++||+++.+..||++++|+++
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G 234 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEG 234 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECC
Confidence 99999999999999999888753 22 478999999999999999999999863
No 354
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.1e-34 Score=314.54 Aligned_cols=192 Identities=28% Similarity=0.356 Sum_probs=164.8
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc---cccccEEEEec
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---DLNKEIFYVPQ 520 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~---~~~~~i~~v~Q 520 (1338)
.++++||++.|++ +.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|++|
T Consensus 2 ~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (207)
T PRK13539 2 MLEGEDLACVRGG-RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDDPDVAEACHYLGH 80 (207)
T ss_pred EEEEEeEEEEECC-eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcchhhHhhcEEecC
Confidence 4789999999864 6799999999999999999999999999999999999999999999998641 14567999998
Q ss_pred CCCCC-CCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000711 521 RPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1338)
Q Consensus 521 ~~~l~-~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1338)
++.++ ..|++||+.+..... ...++++.++++.+++.++.++.+ .+||||||||++||||++++|++
T Consensus 81 ~~~~~~~~tv~~~l~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~~~p~l 148 (207)
T PRK13539 81 RNAMKPALTVAENLEFWAAFL----GGEELDIAAALEAVGLAPLAHLPF--------GYLSAGQKRRVALARLLVSNRPI 148 (207)
T ss_pred CCcCCCCCcHHHHHHHHHHhc----CCcHHHHHHHHHHcCCHHHHcCCh--------hhcCHHHHHHHHHHHHHhcCCCE
Confidence 87664 579999997643211 123456889999999987665544 58999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHhhcceEEEccC
Q 000711 600 AILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 600 llLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~~~d~i~~l~~ 649 (1338)
+||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+.. |+++.++.
T Consensus 149 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 149 WILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 999999999999999999988864 48999999999999887 99987753
No 355
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.2e-34 Score=325.43 Aligned_cols=197 Identities=24% Similarity=0.322 Sum_probs=161.0
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCC--CCCccEEEeCCCCc------c-ccccE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW--PLVSGHIAKPGVGS------D-LNKEI 515 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~--~~~~G~i~~~~~~~------~-~~~~i 515 (1338)
|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+|+|+|+. +|++|+|.++|.+. . .+..+
T Consensus 1 l~~~~l~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 79 (243)
T TIGR01978 1 LKIKDLHVSVE-DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGL 79 (243)
T ss_pred CeEeeEEEEEC-CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccce
Confidence 47899999996 468999999999999999999999999999999999994 79999999998641 1 13359
Q ss_pred EEEecCCCCCCC-CHHHHhcCCCCCCcc------cC-CCCHHHHHHHHHHcCCch-HHhcCCCCccccCCCCCChhHHHH
Q 000711 516 FYVPQRPYTAVG-TLRDQLIYPLTSDQE------VE-PLTHGGMVELLKNVDLEY-LLDRYPPEKEINWGDELSLGEQQR 586 (1338)
Q Consensus 516 ~~v~Q~~~l~~~-tl~eni~~~~~~~~~------~~-~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~g~~LSgGqkQR 586 (1338)
+|+||+|.++.+ |++||+.+....... .. ...++++.++++.+++.+ ..++.+ ...||||||||
T Consensus 80 ~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-------~~~LS~G~~qr 152 (243)
T TIGR01978 80 FLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSV-------NEGFSGGEKKR 152 (243)
T ss_pred EeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhccccc-------ccCcCHHHHHH
Confidence 999999988765 899998764211000 00 011345778888899863 444433 13599999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHhh--cceEEEccC
Q 000711 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAF--HDVVLSLDG 649 (1338)
Q Consensus 587 lalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~~--~d~i~~l~~ 649 (1338)
++|||||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+.. +|++++|++
T Consensus 153 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~ 220 (243)
T TIGR01978 153 NEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLD 220 (243)
T ss_pred HHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeC
Confidence 9999999999999999999999999999999998865 37899999999998864 799999986
No 356
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=6.1e-35 Score=325.43 Aligned_cols=202 Identities=22% Similarity=0.326 Sum_probs=161.8
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc---CCcccEEE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIFY 1176 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~---~lr~~i~~ 1176 (1338)
|+++||++.|++ +++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++.... ..+.+++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (232)
T cd03218 1 LRAENLSKRYGK-RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGY 79 (232)
T ss_pred CeEEEEEEEeCC-EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEE
Confidence 578999999964 56999999999999999999999999999999999999999999999999886542 23456999
Q ss_pred EcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCC
Q 000711 1177 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1338)
Q Consensus 1177 VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 1255 (1338)
+||+|.+|.+ |+++|+.++... .+. .....+..+.++++.+++.....+ ....
T Consensus 80 ~~q~~~~~~~~tv~~~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~----------~~~~ 133 (232)
T cd03218 80 LPQEASIFRKLTVEENILAVLEI----------RGL------SKKEREEKLEELLEEFHITHLRKS----------KASS 133 (232)
T ss_pred ecCCccccccCcHHHHHHHHHHh----------cCC------CHHHHHHHHHHHHHHcCChhhhhC----------Chhh
Confidence 9999999987 999999753210 000 000012234456666666433222 2357
Q ss_pred CChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCC-CcccccceEEEecCC
Q 000711 1256 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPA-LIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1256 LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~-~i~~~d~~l~l~~g~ 1328 (1338)
||||||||++||||++++|++|||||||++||.++.+.+.+.+++ .++|+|+++|+++ ..+++|++++|.+|+
T Consensus 134 LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~ 210 (232)
T cd03218 134 LSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGK 210 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 999999999999999999999999999999999999888776543 4899999999995 677899999997765
No 357
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=5.3e-35 Score=315.24 Aligned_cols=175 Identities=26% Similarity=0.318 Sum_probs=146.8
Q ss_pred CCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc--------cccccEEEEecCC--CC
Q 000711 455 PTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLNKEIFYVPQRP--YT 524 (1338)
Q Consensus 455 ~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~--------~~~~~i~~v~Q~~--~l 524 (1338)
++++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++|+||+| .+
T Consensus 2 ~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 2 PGGPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRPQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred CCccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 3456799999999999999999999999999999999999999999999998541 2345799999998 46
Q ss_pred CCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000711 525 AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDE 604 (1338)
Q Consensus 525 ~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDE 604 (1338)
+..|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||||+++|+++||||
T Consensus 82 ~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 82 FAADVDQDVAFGPLNLGLSEAEVERRVREALTAVGASGLRERPT--------HCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCchhhhhCCh--------hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 77899999987532110000112346778899999988877765 6899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhh
Q 000711 605 CTSAVTTDMEERFCAKVRA---MGTSCITISHRPAL 637 (1338)
Q Consensus 605 pts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~ 637 (1338)
||++||+.+.+.+.+.+++ .|+|+|++||+++.
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~~ 189 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVDL 189 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeecccc
Confidence 9999999999999988764 48999999999864
No 358
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=326.49 Aligned_cols=196 Identities=27% Similarity=0.336 Sum_probs=163.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC--ccc-cccEEEEec
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG--SDL-NKEIFYVPQ 520 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~--~~~-~~~i~~v~Q 520 (1338)
.++++||++.|++++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ... ++.++|+||
T Consensus 6 ~l~~~~l~~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~i~~v~q 85 (272)
T PRK15056 6 GIVVNDVTVTWRNGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQALQKNLVAYVPQ 85 (272)
T ss_pred eEEEEeEEEEecCCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHHhhccceEEEecc
Confidence 58999999999766789999999999999999999999999999999999999999999999864 112 246999999
Q ss_pred CCCC---CCCCHHHHhcCCCCCC----cccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000711 521 RPYT---AVGTLRDQLIYPLTSD----QEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1338)
Q Consensus 521 ~~~l---~~~tl~eni~~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1338)
+|.+ +..++++|+.++.... .......++++.++++.+++.+..++.+ .+||||||||++|||||
T Consensus 86 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgG~~qrv~laraL 157 (272)
T PRK15056 86 SEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI--------GELSGGQKKRVFLARAI 157 (272)
T ss_pred ccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc--------ccCCHHHHHHHHHHHHH
Confidence 9864 3457899987642110 0000112345678899999988777655 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhH-hhcceEEEc
Q 000711 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSL 647 (1338)
Q Consensus 594 ~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~-~~~d~i~~l 647 (1338)
+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..||+++.+
T Consensus 158 ~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~ 215 (272)
T PRK15056 158 AQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV 215 (272)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999988864 489999999999876 578999777
No 359
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=327.64 Aligned_cols=198 Identities=23% Similarity=0.266 Sum_probs=164.1
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC-----CCccEEEeCCCCc--------
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS-------- 509 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~-------- 509 (1338)
..++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+.+ |++|+|.++|.+.
T Consensus 20 ~~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 20 HILEVKDLSIYYG-EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred ceEEEEEEEEEeC-CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 4699999999996 4679999999999999999999999999999999999864 7999999998541
Q ss_pred cccccEEEEecCCCCCCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCc----hHHhcCCCCccccCCCCCChhHH
Q 000711 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLE----YLLDRYPPEKEINWGDELSLGEQ 584 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~~~~~~g~~LSgGqk 584 (1338)
..++.++|+||++.++.+|++||+.++....... ....++.+.++++.+++. +..++. ..+||||||
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LSgGq~ 170 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSS--------ALSLSGGQQ 170 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcC--------cccCCHHHH
Confidence 2356799999999998899999998753211100 011234567788888874 233333 368999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 585 QRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
||++|||||+.+|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+ ..||++++|++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~ 238 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLN 238 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999998865 368999999999876 57999999986
No 360
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-34 Score=325.18 Aligned_cols=203 Identities=25% Similarity=0.267 Sum_probs=162.0
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--CCcccEEEE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYV 1177 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~--~lr~~i~~V 1177 (1338)
++++||++.|++.+++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++.... ..+.+++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (242)
T cd03295 1 IEFENVTKRYGGGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYV 80 (242)
T ss_pred CEEEEEEEEeCCcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEE
Confidence 478999999975356999999999999999999999999999999999999999999999999887642 335579999
Q ss_pred cCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchh--hhhhhcccCcccCcccC
Q 000711 1178 PQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY--LLEREEVGWDANLNWED 1254 (1338)
Q Consensus 1178 pQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~--~i~~~~~Gldt~~~~g~ 1254 (1338)
||+|.+|. .|++||+.++... .+.. ....++.+.++++.+++.. ...+ ...
T Consensus 81 ~q~~~~~~~~tv~e~l~~~~~~----------~~~~------~~~~~~~~~~~l~~l~l~~~~~~~~----------~~~ 134 (242)
T cd03295 81 IQQIGLFPHMTVEENIALVPKL----------LKWP------KEKIRERADELLALVGLDPAEFADR----------YPH 134 (242)
T ss_pred ccCccccCCCcHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHcCCCcHHHHhc----------Chh
Confidence 99999996 6999999653100 0000 0001233556667666642 2111 235
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCC-cccccceEEEecCC
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPAL-IPFHSLELRLIDGE 1328 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~-i~~~d~~l~l~~g~ 1328 (1338)
+||||||||++||||++++|+++||||||++||.++.+.+.+.+++ .|+|+|+|+|+++. ..++|+++.|.+|+
T Consensus 135 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~ 213 (242)
T cd03295 135 ELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGE 213 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 7999999999999999999999999999999999999887766543 38999999999984 57899999997765
No 361
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=325.76 Aligned_cols=209 Identities=20% Similarity=0.237 Sum_probs=165.2
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCC---CCCceEEcCCCCCccc--cCCccc
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP---VVSGSLTKPSQHIDEE--AGSGCG 1173 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~---~~sG~I~idg~dI~~~--~~lr~~ 1173 (1338)
.|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++ |++|+|.+||.++... ...|.+
T Consensus 2 ~~~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 80 (246)
T PRK14269 2 IAKTTNLNLFYGK-KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKN 80 (246)
T ss_pred ceeeeeeEEEECC-EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhh
Confidence 4789999999974 579999999999999999999999999999999999985 6899999999998765 234557
Q ss_pred EEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCccc
Q 000711 1174 IFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1338)
Q Consensus 1174 i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 1253 (1338)
++|+||+|.+|..|+++|+.++... .+. . ......+..+.++++.+++...+... ++ ...
T Consensus 81 i~~~~q~~~l~~~tv~eni~~~~~~----------~~~---~-~~~~~~~~~~~~~l~~~~l~~~~~~~---~~---~~~ 140 (246)
T PRK14269 81 VGMVFQQPNVFVKSIYENISYAPKL----------HGM---I-KNKDEEEALVVDCLQKVGLFEEVKDK---LK---QNA 140 (246)
T ss_pred EEEEecCCccccccHHHHhhhHHhh----------cCc---c-cChHHHHHHHHHHHHHcCCChhhhHH---hc---CCc
Confidence 9999999999999999999753210 000 0 00001123455667777764322111 01 124
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCC-cccccceEEEecCC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPAL-IPFHSLELRLIDGE 1328 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~-i~~~d~~l~l~~g~ 1328 (1338)
.+||||||||++||||++++|+++||||||++||.++...+.+.+++ .++|+|+|+|+++. .+++|+++.|.+|+
T Consensus 141 ~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~ 218 (246)
T PRK14269 141 LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGE 218 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCE
Confidence 67999999999999999999999999999999999999888776643 48999999999985 56899999997765
No 362
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=6.6e-35 Score=322.98 Aligned_cols=200 Identities=22% Similarity=0.335 Sum_probs=158.0
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc---CCcccEEE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIFY 1176 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~---~lr~~i~~ 1176 (1338)
|+++||++.|++ .++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.... ..+.+++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (222)
T cd03224 1 LEVENLNAGYGK-SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGY 79 (222)
T ss_pred CEEeeEEeecCC-eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEE
Confidence 578999999975 47999999999999999999999999999999999999999999999999887652 22457999
Q ss_pred EcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhC-CchhhhhhhcccCcccCcccC
Q 000711 1177 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGV-RLSYLLEREEVGWDANLNWED 1254 (1338)
Q Consensus 1177 VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~-~L~~~i~~~~~Gldt~~~~g~ 1254 (1338)
|||+|.+|.+ |+++|+.++...... ......+.++++.+ ++.. .+++. ..
T Consensus 80 ~~q~~~~~~~~t~~~~l~~~~~~~~~------------------~~~~~~~~~~l~~~~~l~~-------~~~~~---~~ 131 (222)
T cd03224 80 VPEGRRIFPELTVEENLLLGAYARRR------------------AKRKARLERVYELFPRLKE-------RRKQL---AG 131 (222)
T ss_pred eccccccCCCCcHHHHHHHHhhhcCc------------------hhHHHHHHHHHHHHHhhhh-------hhhCc---hh
Confidence 9999999987 999999764211000 00011222333333 1211 11222 34
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCC-cccccceEEEecCC
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPAL-IPFHSLELRLIDGE 1328 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~-i~~~d~~l~l~~g~ 1328 (1338)
.||||||||++||||++++|++|||||||++||.++.+.+.+.+++ .++|+|+++|+++. ..++|+++.+.+|+
T Consensus 132 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (222)
T cd03224 132 TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGR 209 (222)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCe
Confidence 6999999999999999999999999999999999999888776643 48999999999985 57799999997654
No 363
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-34 Score=321.68 Aligned_cols=195 Identities=27% Similarity=0.394 Sum_probs=166.3
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----cccccEEEEec
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 520 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~Q 520 (1338)
|+++|+++.|++ ++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+||
T Consensus 1 l~~~~l~~~~~~--~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~~~q 78 (235)
T cd03299 1 LKVENLSKDWKE--FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYVPQ 78 (235)
T ss_pred CeeEeEEEEeCC--ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEEEee
Confidence 468999999864 389999999999999999999999999999999999999999999998641 12457999999
Q ss_pred CCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000711 521 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1338)
Q Consensus 521 ~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1338)
++.++. .|++||+.++...........++++.++++.+++.++.++.+ .+||||||||++||||++++|++
T Consensus 79 ~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~laral~~~p~l 150 (235)
T cd03299 79 NYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKP--------ETLSGGEQQRVAIARALVVNPKI 150 (235)
T ss_pred cCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCc--------ccCCHHHHHHHHHHHHHHcCCCE
Confidence 998875 699999987532111001112346778899999998888876 68999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 600 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 600 llLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
++|||||++||+.+.+.+.+.+++ .++|+|++||++..+. .+|++++|++
T Consensus 151 lllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~ 205 (235)
T cd03299 151 LLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLN 205 (235)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 999999999999999999988764 2899999999999875 6999999986
No 364
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=325.87 Aligned_cols=198 Identities=26% Similarity=0.304 Sum_probs=163.3
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCCc--------c
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS--------D 510 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~--------~ 510 (1338)
.++++||++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. .
T Consensus 4 ~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 82 (253)
T PRK14267 4 AIETVNLRVYYGS-NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIE 82 (253)
T ss_pred eEEEEeEEEEeCC-eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHH
Confidence 5899999999964 6799999999999999999999999999999999999987 499999998641 2
Q ss_pred ccccEEEEecCCCCCCC-CHHHHhcCCCCCCcc--cCCCCHHHHHHHHHHcCCchH----HhcCCCCccccCCCCCChhH
Q 000711 511 LNKEIFYVPQRPYTAVG-TLRDQLIYPLTSDQE--VEPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGE 583 (1338)
Q Consensus 511 ~~~~i~~v~Q~~~l~~~-tl~eni~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGq 583 (1338)
++++++|+||++.++.. |+.||+.++...... .....++++.++++.+++... .++. ..+|||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LS~G~ 154 (253)
T PRK14267 83 VRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDY--------PSNLSGGQ 154 (253)
T ss_pred HhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccC--------hhhCCHHH
Confidence 34679999999988865 999999875321100 001123456788888887532 2222 36899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 584 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 584 kQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
|||++||||++++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .||++++|+++
T Consensus 155 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G 224 (253)
T PRK14267 155 RQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLG 224 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECC
Confidence 9999999999999999999999999999999999998865 3689999999999864 69999999863
No 365
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=341.77 Aligned_cols=203 Identities=20% Similarity=0.332 Sum_probs=165.3
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEc
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~Vp 1178 (1338)
.|+++|+++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++......+++|+|||
T Consensus 3 ~l~i~~l~~~~~~-~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v~ 81 (369)
T PRK11000 3 SVTLRNVTKAYGD-VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMVF 81 (369)
T ss_pred EEEEEEEEEEeCC-eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEEe
Confidence 4899999999964 569999999999999999999999999999999999999999999999999876643445799999
Q ss_pred CCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1179 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1179 QdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
|+|.+|.. |++||+.++.... +. .....++.+.++++.++|..+.++. ..+||
T Consensus 82 Q~~~l~~~~tv~eni~~~~~~~----------~~------~~~~~~~~~~~~l~~lgL~~~~~~~----------~~~LS 135 (369)
T PRK11000 82 QSYALYPHLSVAENMSFGLKLA----------GA------KKEEINQRVNQVAEVLQLAHLLDRK----------PKALS 135 (369)
T ss_pred CCcccCCCCCHHHHHHhHHhhc----------CC------CHHHHHHHHHHHHHHcCChhhhcCC----------hhhCC
Confidence 99999975 9999998753100 00 0000123456677777775544332 24699
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCC-CcccccceEEEecCC
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPA-LIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~-~i~~~d~~l~l~~g~ 1328 (1338)
||||||++|||||+++|++||||||||+||..+.+.+.+.+++ .+.|+|+|+|+++ ...++|++++|.+|+
T Consensus 136 gGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~ 211 (369)
T PRK11000 136 GGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGR 211 (369)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999998877665432 4899999999997 457899999997664
No 366
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.8e-34 Score=320.57 Aligned_cols=203 Identities=22% Similarity=0.257 Sum_probs=164.0
Q ss_pred ceEEeeeEEeCCCc---cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc------C
Q 000711 1099 SISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA------G 1169 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~---~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~------~ 1169 (1338)
.|+++||++.|++. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 58999999999753 36999999999999999999999999999999999999999999999999887642 1
Q ss_pred CcccEEEEcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcc
Q 000711 1170 SGCGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1338)
Q Consensus 1170 lr~~i~~VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 1248 (1338)
++.+++|+||+|.+|.+ |++||+.++.... +. ......+.+.++++.+++....++.
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~------ 143 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLR----------GE------SSRQSRNGAKALLEQLGLGKRLDHL------ 143 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhc----------CC------CHHHHHHHHHHHHHHcCCHhHhhCC------
Confidence 23479999999999875 9999996531000 00 0000123455667777775444332
Q ss_pred cCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCcccccceEEE
Q 000711 1249 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRL 1324 (1338)
Q Consensus 1249 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i~~~d~~l~l 1324 (1338)
...||||||||++|||||+++|++|||||||++||.++.+.+.+.+++ .+.|||+|+|+++.+..+|+++++
T Consensus 144 ----~~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l 219 (228)
T PRK10584 144 ----PAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRL 219 (228)
T ss_pred ----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEE
Confidence 246999999999999999999999999999999999999887776532 389999999999888889999999
Q ss_pred ecC
Q 000711 1325 IDG 1327 (1338)
Q Consensus 1325 ~~g 1327 (1338)
.+|
T Consensus 220 ~~g 222 (228)
T PRK10584 220 VNG 222 (228)
T ss_pred ECC
Confidence 655
No 367
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.1e-34 Score=322.70 Aligned_cols=200 Identities=28% Similarity=0.361 Sum_probs=158.0
Q ss_pred eEEeeeEEeCCCc---cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-----CCc
Q 000711 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSG 1171 (1338)
Q Consensus 1100 I~f~nV~f~yp~~---~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~-----~lr 1171 (1338)
|+++||++.|++. .++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++.... ..|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 7899999999754 37999999999999999999999999999999999999999999999999887643 345
Q ss_pred ccEEEEcCCC--CCC-CCCHHHHhcCCCc-----hHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCch-hhhhhh
Q 000711 1172 CGIFYVPQRP--YTC-LGTLRDQIIYPLS-----REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLERE 1242 (1338)
Q Consensus 1172 ~~i~~VpQdP--~LF-~GTIReNL~~p~~-----~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~-~~i~~~ 1242 (1338)
++++|+||+| .++ ..|+++|+.++.. ..++.. +....++++.+++. ...++
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~-------------------~~~~~~~l~~~~l~~~~~~~- 141 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEAR-------------------KEAVLLLLVGVGLPEEVLNR- 141 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHH-------------------HHHHHHHHHHCCCChhHhhC-
Confidence 6799999999 344 5799999964210 000000 00012445555552 22211
Q ss_pred cccCcccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCcc-c
Q 000711 1243 EVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIP-F 1317 (1338)
Q Consensus 1243 ~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i~-~ 1317 (1338)
...+||||||||++||||++++|++|||||||++||.++.+.+.+.+++ .|+|+|+++|+++.+. +
T Consensus 142 ---------~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~ 212 (228)
T cd03257 142 ---------YPHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKI 212 (228)
T ss_pred ---------CchhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHh
Confidence 1356999999999999999999999999999999999999888776543 2899999999998766 8
Q ss_pred ccceEEEecCC
Q 000711 1318 HSLELRLIDGE 1328 (1338)
Q Consensus 1318 ~d~~l~l~~g~ 1328 (1338)
+|+++.|.+|+
T Consensus 213 ~d~i~~l~~G~ 223 (228)
T cd03257 213 ADRVAVMYAGK 223 (228)
T ss_pred cCeEEEEeCCE
Confidence 99999997653
No 368
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=7e-35 Score=310.58 Aligned_cols=169 Identities=27% Similarity=0.357 Sum_probs=150.8
Q ss_pred eEEeeeEEeCCCc-cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc-cCCcccEEEE
Q 000711 1100 ISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYV 1177 (1338)
Q Consensus 1100 I~f~nV~f~yp~~-~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~-~~lr~~i~~V 1177 (1338)
|+++|+++.|++. +++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.+||.++... ...+.+++|+
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 80 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISVL 80 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEEE
Confidence 5799999999764 5799999999999999999999999999999999999999999999999987654 2234579999
Q ss_pred cCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1178 PQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1178 pQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
||+|.+|++|++||+ + ..||
T Consensus 81 ~q~~~~~~~tv~~~i--~----------------------------------------------------------~~LS 100 (178)
T cd03247 81 NQRPYLFDTTLRNNL--G----------------------------------------------------------RRFS 100 (178)
T ss_pred ccCCeeecccHHHhh--c----------------------------------------------------------ccCC
Confidence 999999999999987 1 1379
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
+|||||++||||++++|++|||||||++||.++.+.+.+.+++ .++|+|+++|+++.+..+|+++.+.+|.
T Consensus 101 ~G~~qrv~laral~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 173 (178)
T cd03247 101 GGERQRLALARILLQDAPIVLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGK 173 (178)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999888777653 4899999999999889999999997653
No 369
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.2e-34 Score=307.23 Aligned_cols=166 Identities=31% Similarity=0.482 Sum_probs=149.4
Q ss_pred eEEeeeEEeCCC-ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--CCcccEEE
Q 000711 1100 ISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFY 1176 (1338)
Q Consensus 1100 I~f~nV~f~yp~-~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~--~lr~~i~~ 1176 (1338)
|+++|++++|++ ..++++|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.... ..+.+++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 578999999975 357999999999999999999999999999999999999999999999999887652 34567999
Q ss_pred EcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCC
Q 000711 1177 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 1256 (1338)
Q Consensus 1177 VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~L 1256 (1338)
+||+|.+|++|+++|+ |
T Consensus 81 ~~q~~~~~~~tv~~~l---------------------------------------------------------------L 97 (173)
T cd03246 81 LPQDDELFSGSIAENI---------------------------------------------------------------L 97 (173)
T ss_pred ECCCCccccCcHHHHC---------------------------------------------------------------c
Confidence 9999999988988875 3
Q ss_pred ChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1257 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1257 SgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
|||||||++||||++++|++|||||||++||..+.+.+.+.++. .++|+|+++|+++.+..+|+++.|.+|+
T Consensus 98 S~G~~qrv~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~ 172 (173)
T cd03246 98 SGGQRQRLGLARALYGNPRILVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGR 172 (173)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCC
Confidence 99999999999999999999999999999999999888776543 4899999999999889999999997653
No 370
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.2e-34 Score=340.14 Aligned_cols=203 Identities=24% Similarity=0.316 Sum_probs=167.9
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEc
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~Vp 1178 (1338)
.++++|++++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++......+++|+||+
T Consensus 14 ~L~l~~l~~~~~~-~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~vf 92 (375)
T PRK09452 14 LVELRGISKSFDG-KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVNTVF 92 (375)
T ss_pred eEEEEEEEEEECC-eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 5999999999964 569999999999999999999999999999999999999999999999999977643445799999
Q ss_pred CCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1179 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1179 QdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
|++.||.. |++|||.|+.... +. .....+..+.++++.++|..+.++.| .+||
T Consensus 93 Q~~~lfp~ltv~eNi~~~l~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~p----------~~LS 146 (375)
T PRK09452 93 QSYALFPHMTVFENVAFGLRMQ----------KT------PAAEITPRVMEALRMVQLEEFAQRKP----------HQLS 146 (375)
T ss_pred cCcccCCCCCHHHHHHHHHhhc----------CC------CHHHHHHHHHHHHHHcCCchhhhCCh----------hhCC
Confidence 99999975 9999998764210 00 00001234556677777766555543 4699
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHH----hcCCeEEEeccCCC-CcccccceEEEecCC
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPA-LIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~----~~~~TvI~IAHRl~-~i~~~d~~l~l~~g~ 1328 (1338)
||||||+||||||+++|++|+||||||+||..+.+.+.+.++ +.|+|+|.|+|+.. ...++|++++|.+|+
T Consensus 147 gGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~ 222 (375)
T PRK09452 147 GGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGR 222 (375)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999887776553 24899999999997 567899999998765
No 371
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=323.65 Aligned_cols=199 Identities=21% Similarity=0.242 Sum_probs=164.2
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCCc--------
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-------- 509 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~-------- 509 (1338)
+.++++||++.|++ +++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 2 ~~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14240 2 GKISVKDLDLFYGD-FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVN 80 (250)
T ss_pred CeEEEEEEEEEECC-ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchH
Confidence 35899999999964 6799999999999999999999999999999999999863 699999998641
Q ss_pred cccccEEEEecCCCCCCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCchH----HhcCCCCccccCCCCCChhHH
Q 000711 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQ 584 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGqk 584 (1338)
.+++.++|+||+|.++..|++||+.++....... ....++++.++++.+++.+. .++. ..+||||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--------~~~LS~G~~ 152 (250)
T PRK14240 81 QLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKS--------ALGLSGGQQ 152 (250)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcC--------CCCCCHHHH
Confidence 2356799999999988899999998753211100 01124566778888887532 2332 368999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 585 QRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
||++|||||+.+|++++|||||++||+.++..+.+.+++ .++|+|++||+++.+ ..+|++++|+++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G 221 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNG 221 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECC
Confidence 999999999999999999999999999999999998865 378999999999976 469999999863
No 372
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-34 Score=325.09 Aligned_cols=196 Identities=24% Similarity=0.324 Sum_probs=165.4
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCC--------ccEEEeCCCCc------c
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV--------SGHIAKPGVGS------D 510 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~--------~G~i~~~~~~~------~ 510 (1338)
++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+|+|+|+++|+ +|+|.++|.+. .
T Consensus 2 l~~~nl~~~~~-~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (272)
T PRK13547 2 LTADHLHVARR-HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPR 80 (272)
T ss_pred eEEEEEEEEEC-CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHH
Confidence 78999999985 468999999999999999999999999999999999999998 99999998641 2
Q ss_pred ccccEEEEecCCC-CCCCCHHHHhcCCCCCCc----ccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHH
Q 000711 511 LNKEIFYVPQRPY-TAVGTLRDQLIYPLTSDQ----EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQ 585 (1338)
Q Consensus 511 ~~~~i~~v~Q~~~-l~~~tl~eni~~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQ 585 (1338)
.++.++|+||++. ++..|++||+.++..... ......++.+.++++.+++.+..++.+ .+|||||||
T Consensus 81 ~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~q 152 (272)
T PRK13547 81 LARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDV--------TTLSGGELA 152 (272)
T ss_pred HHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCc--------ccCCHHHHH
Confidence 3456899999985 567899999987532110 001112345778999999988777654 689999999
Q ss_pred HHHHHHHHc---------cCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 586 RLGMARLFY---------HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 586 RlalARal~---------~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|++|||||+ .+|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .||++++|++
T Consensus 153 rv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~ 230 (272)
T PRK13547 153 RVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLAD 230 (272)
T ss_pred HHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999 59999999999999999999999988764 2799999999999885 7999999986
No 373
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.2e-34 Score=338.79 Aligned_cols=204 Identities=18% Similarity=0.264 Sum_probs=167.9
Q ss_pred CceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCC--ceEEcCCCCCccccCCcccEE
Q 000711 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVS--GSLTKPSQHIDEEAGSGCGIF 1175 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~s--G~I~idg~dI~~~~~lr~~i~ 1175 (1338)
|.|+++||++.|++ ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++ |+|.+||.++......+++|+
T Consensus 4 ~~l~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ig 82 (362)
T TIGR03258 4 GGIRIDHLRVAYGA-NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGLA 82 (362)
T ss_pred eEEEEEEEEEEECC-eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCEE
Confidence 68999999999965 569999999999999999999999999999999999999999 999999999876643445799
Q ss_pred EEcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccC
Q 000711 1176 YVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1338)
Q Consensus 1176 ~VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 1254 (1338)
||+|+|.||.. |+++||.|+.... +. .....+..+.++++.++|.++.++.| .
T Consensus 83 ~vfQ~~~l~p~~tv~enl~~~l~~~----------~~------~~~~~~~~v~~~l~~~gL~~~~~~~~----------~ 136 (362)
T TIGR03258 83 LLFQNYALFPHLKVEDNVAFGLRAQ----------KM------PKADIAERVADALKLVGLGDAAAHLP----------A 136 (362)
T ss_pred EEECCcccCCCCcHHHHHHHHHHHc----------CC------CHHHHHHHHHHHHHhcCCCchhhCCh----------h
Confidence 99999999976 9999998753200 00 00001234566777788766555443 4
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHH----hc-CCeEEEeccCCC-CcccccceEEEecCC
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DM-GITFVTSSQRPA-LIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~----~~-~~TvI~IAHRl~-~i~~~d~~l~l~~g~ 1328 (1338)
+||||||||+||||||+++|++|+||||||+||..+.+.+.+.++ +. |+|+|.|+|.++ ....+|++++|.+|+
T Consensus 137 ~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~ 216 (362)
T TIGR03258 137 QLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGR 216 (362)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 699999999999999999999999999999999999887766543 23 799999999997 467899999997664
No 374
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.3e-34 Score=326.47 Aligned_cols=203 Identities=21% Similarity=0.259 Sum_probs=163.6
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-----------
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA----------- 1168 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~----------- 1168 (1338)
|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++....
T Consensus 1 i~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ 79 (252)
T TIGR03005 1 VRFSDVTKRFGI-LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADE 79 (252)
T ss_pred CEEEEEEEEeCC-eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccch
Confidence 579999999974 57999999999999999999999999999999999999999999999999886431
Q ss_pred ----CCcccEEEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhc
Q 000711 1169 ----GSGCGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREE 1243 (1338)
Q Consensus 1169 ----~lr~~i~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~ 1243 (1338)
..+++++||||+|.+|. .|+++|+.++.... .+. .....++.+.++++.+++....++.
T Consensus 80 ~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~---------~~~------~~~~~~~~~~~~l~~~gl~~~~~~~- 143 (252)
T TIGR03005 80 KHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV---------LGM------ARAEAEKRAMELLDMVGLADKADHM- 143 (252)
T ss_pred hHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh---------cCC------CHHHHHHHHHHHHHHcCChhHhhcC-
Confidence 23557999999999885 79999997531000 000 0001133456677777775444332
Q ss_pred ccCcccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccc
Q 000711 1244 VGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFH 1318 (1338)
Q Consensus 1244 ~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~ 1318 (1338)
...||||||||++||||++++|+++||||||++||+++...+.+.+++ .++|+|+|+|+++.+ +++
T Consensus 144 ---------~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~ 214 (252)
T TIGR03005 144 ---------PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFA 214 (252)
T ss_pred ---------hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhc
Confidence 356999999999999999999999999999999999999887776543 389999999999876 689
Q ss_pred cceEEEecCC
Q 000711 1319 SLELRLIDGE 1328 (1338)
Q Consensus 1319 d~~l~l~~g~ 1328 (1338)
|++++|.+|+
T Consensus 215 d~i~~l~~G~ 224 (252)
T TIGR03005 215 DRVCFFDKGR 224 (252)
T ss_pred CEEEEEECCE
Confidence 9999997765
No 375
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-35 Score=333.31 Aligned_cols=203 Identities=22% Similarity=0.237 Sum_probs=162.0
Q ss_pred eEEeeeEEeCCCc----cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc------cC
Q 000711 1100 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------AG 1169 (1338)
Q Consensus 1100 I~f~nV~f~yp~~----~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~------~~ 1169 (1338)
|+++||++.|++. .++|+|+||+|++||.+||+|+||||||||+++|.|+.+|++|+|.+||.++... ..
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 7899999999752 5799999999999999999999999999999999999999999999999988531 22
Q ss_pred CcccEEEEcCCC--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCch-hhhhhhcccC
Q 000711 1170 SGCGIFYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLEREEVGW 1246 (1338)
Q Consensus 1170 lr~~i~~VpQdP--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~-~~i~~~~~Gl 1246 (1338)
.+++++||||+| .+|+.|+++||.++... .+.. .+...+.+.++++.++|. .+.++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~----------~~~~------~~~~~~~~~~~l~~~gL~~~~~~~----- 141 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMN----------FGVS------EEDAKQKAREMIELVGLPEELLAR----- 141 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHCCCChhhhhC-----
Confidence 345799999998 68889999999753110 0000 000112345566777764 22221
Q ss_pred cccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccce
Q 000711 1247 DANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLE 1321 (1338)
Q Consensus 1247 dt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~ 1321 (1338)
....||||||||++|||||+.+|++||||||||+||+.+...+.+++++ .|.|||+|+|+++.+ +++|++
T Consensus 142 -----~~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 142 -----SPFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred -----CcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEE
Confidence 1357999999999999999999999999999999999999887776543 389999999999865 789999
Q ss_pred EEEecCC
Q 000711 1322 LRLIDGE 1328 (1338)
Q Consensus 1322 l~l~~g~ 1328 (1338)
+.|.+|+
T Consensus 217 ~~l~~G~ 223 (290)
T PRK13634 217 VVMHKGT 223 (290)
T ss_pred EEEECCE
Confidence 9997765
No 376
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-34 Score=323.61 Aligned_cols=202 Identities=22% Similarity=0.242 Sum_probs=164.3
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC--C---CccEEEeCCCCc--------
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP--L---VSGHIAKPGVGS-------- 509 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~--~---~~G~i~~~~~~~-------- 509 (1338)
+.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|.+.
T Consensus 3 ~~l~~~nl~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 81 (252)
T PRK14256 3 NKVKLEQLNVHFG-KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPV 81 (252)
T ss_pred cEEEEEEEEEEeC-CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChH
Confidence 4689999999996 4689999999999999999999999999999999999986 4 699999998541
Q ss_pred cccccEEEEecCCCCCC-CCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHH
Q 000711 510 DLNKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRL 587 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~~l~~-~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRl 587 (1338)
.+++.++|+||++.++. .|++||+.++....... ....++++.++++.+++...+.... + ....+||||||||+
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~---~~~~~LS~G~~qrl 157 (252)
T PRK14256 82 SIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRL-K---SNAMELSGGQQQRL 157 (252)
T ss_pred HhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHh-h---CCcCcCCHHHHHHH
Confidence 23567999999998887 59999998753211100 0112345678888888864322110 0 11368999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHcc--CCeEEEEecChhhH-hhcceEEEccC
Q 000711 588 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 588 alARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
+||||++.+|+++||||||++||+.+.+.+++.+++. ++|+|++||+++.+ ..||++++|++
T Consensus 158 ~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~ 222 (252)
T PRK14256 158 CIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYM 222 (252)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEEC
Confidence 9999999999999999999999999999999988653 78999999999987 57999999986
No 377
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3.7e-34 Score=324.63 Aligned_cols=198 Identities=19% Similarity=0.247 Sum_probs=167.2
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCC---ccEEEeCCCCc-----------
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV---SGHIAKPGVGS----------- 509 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~---~G~i~~~~~~~----------- 509 (1338)
.++++||++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.+.
T Consensus 4 ~l~~~nl~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (262)
T PRK09984 4 IIRVEKLAKTFN-QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIR 82 (262)
T ss_pred EEEEeeEEEEeC-CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHH
Confidence 689999999986 468999999999999999999999999999999999999986 49999999641
Q ss_pred cccccEEEEecCCCCCC-CCHHHHhcCCCCCCc--------ccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCC
Q 000711 510 DLNKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQ--------EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELS 580 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~~l~~-~tl~eni~~~~~~~~--------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LS 580 (1338)
.+++.++|+||++.++. .|++||+.++..... ........++.++++.+++.+..++.+ .+||
T Consensus 83 ~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS 154 (262)
T PRK09984 83 KSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV--------STLS 154 (262)
T ss_pred HHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc--------cccC
Confidence 12356999999998776 599999987632110 001112356788999999988777755 6899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 581 LGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 581 gGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
||||||++||||++.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..||++++++++
T Consensus 155 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g 229 (262)
T PRK09984 155 GGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQG 229 (262)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999988764 379999999999975 689999999863
No 378
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=328.93 Aligned_cols=203 Identities=19% Similarity=0.183 Sum_probs=164.7
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc---CCcccEEE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIFY 1176 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~---~lr~~i~~ 1176 (1338)
|+++||++.|++.+++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++.... ..+.+++|
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 81 (274)
T PRK13644 2 IRLENVSYSYPDGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVGI 81 (274)
T ss_pred EEEEEEEEEcCCCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheEE
Confidence 689999999976667999999999999999999999999999999999999999999999999886542 33457999
Q ss_pred EcCCCC--CCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccC
Q 000711 1177 VPQRPY--TCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1338)
Q Consensus 1177 VpQdP~--LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 1254 (1338)
|||+|. ++..|+++||.++.... +. .....+..+.++++.+++....++. ..
T Consensus 82 v~q~~~~~~~~~tv~enl~~~~~~~----------~~------~~~~~~~~~~~~l~~~gl~~~~~~~----------~~ 135 (274)
T PRK13644 82 VFQNPETQFVGRTVEEDLAFGPENL----------CL------PPIEIRKRVDRALAEIGLEKYRHRS----------PK 135 (274)
T ss_pred EEEChhhhcccchHHHHHHhhHHHc----------CC------CHHHHHHHHHHHHHHCCCHHHhcCC----------cc
Confidence 999985 56789999997531100 00 0000123345566777775443322 34
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
.||+|||||++||||++++|++|||||||++||+.+...+.+.+++ .|+|+|+++|+++.+..+|+++.|.+|+
T Consensus 136 ~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~ 212 (274)
T PRK13644 136 TLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGK 212 (274)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCE
Confidence 6999999999999999999999999999999999998887776542 4899999999999888999999997765
No 379
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=324.00 Aligned_cols=198 Identities=23% Similarity=0.268 Sum_probs=163.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC--C---CccEEEeCCCCc--------c
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP--L---VSGHIAKPGVGS--------D 510 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~--~---~~G~i~~~~~~~--------~ 510 (1338)
.++++||++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+.+ | ++|+|.++|.+. .
T Consensus 5 ~l~~~~l~~~~~-~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 83 (252)
T PRK14239 5 ILQVSDLSVYYN-KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVD 83 (252)
T ss_pred eEEEEeeEEEEC-CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHh
Confidence 689999999996 4679999999999999999999999999999999999953 6 599999998541 2
Q ss_pred ccccEEEEecCCCCCCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCchH----HhcCCCCccccCCCCCChhHHH
Q 000711 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQQ 585 (1338)
Q Consensus 511 ~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGqkQ 585 (1338)
+++.++|+||+|.+++.|++||+.++....... ....++++.++++.+++... .++. ..+|||||||
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LS~G~~q 155 (252)
T PRK14239 84 LRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--------ALGLSGGQQQ 155 (252)
T ss_pred hhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcC--------cccCCHHHHH
Confidence 356799999999998899999998753211100 11123456778888887532 3332 3689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 586 RlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
|++||||++++|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+ ..||++++|+++
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G 223 (252)
T PRK14239 156 RVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDG 223 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999998875 368999999999876 579999999863
No 380
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=323.56 Aligned_cols=201 Identities=21% Similarity=0.253 Sum_probs=163.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCC---CCC--CccEEEeCCCCc--------c
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGL---WPL--VSGHIAKPGVGS--------D 510 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~---~~~--~~G~i~~~~~~~--------~ 510 (1338)
.++++|+++.|++ +++++|+||++++||+++|+||||||||||+++|+|+ .+| ++|+|.++|.+. .
T Consensus 3 ~l~~~~~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 81 (250)
T PRK14245 3 KIDARDVNFWYGD-FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDE 81 (250)
T ss_pred EEEEEEEEEEECC-EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHH
Confidence 5899999999864 6799999999999999999999999999999999997 455 599999998641 2
Q ss_pred ccccEEEEecCCCCCCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHH
Q 000711 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1338)
Q Consensus 511 ~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1338)
.++.++|+||+|.++..|++||+.++....... ....++++.++++.+++.+.+.... .....+||||||||++|
T Consensus 82 ~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----~~~~~~LS~G~~qrv~l 157 (250)
T PRK14245 82 LRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKL----KESAFALSGGQQQRLCI 157 (250)
T ss_pred HhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhh----hCCcccCCHHHHHHHHH
Confidence 345799999999988889999998753211000 0112345778888898864322110 01136899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 590 ARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
||||+.+|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+ ..+|++++|++
T Consensus 158 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~ 220 (250)
T PRK14245 158 ARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYM 220 (250)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEEC
Confidence 9999999999999999999999999999998875 378999999999987 57999999986
No 381
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=325.36 Aligned_cols=202 Identities=20% Similarity=0.220 Sum_probs=163.8
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC--C---CccEEEeCCCCc--------
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP--L---VSGHIAKPGVGS-------- 509 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~--~---~~G~i~~~~~~~-------- 509 (1338)
..++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|.+.
T Consensus 11 ~~l~i~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 11 EVYQINGMNLWYG-QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred ceEEEeeEEEEEC-CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 4699999999986 4679999999999999999999999999999999999987 3 699999998641
Q ss_pred cccccEEEEecCCCCCCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHH
Q 000711 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1338)
.+++.++|+||++.++..|++||+.++....... .....+++.++++.+++.+.+.... .....+||||||||++
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l----~~~~~~LS~Gq~qrv~ 165 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRL----HTQALSLSGGQQQRLC 165 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhh----hCCcccCCHHHHHHHH
Confidence 2346799999999988889999998753211100 0111234667788888864321100 0113689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHcc--CCeEEEEecChhhH-hhcceEEEccC
Q 000711 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 589 lARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
||||++++|+++||||||++||+.+...+.+.+++. ++|+|++||+++.+ ..+|++++|++
T Consensus 166 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~ 229 (259)
T PRK14274 166 IARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYM 229 (259)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999988653 78999999999986 47999999986
No 382
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=326.28 Aligned_cols=198 Identities=23% Similarity=0.305 Sum_probs=164.1
Q ss_pred CCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC-----CCccEEEeCCCCc-------
Q 000711 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS------- 509 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~------- 509 (1338)
...|+++||++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 37 ~~~l~i~~l~~~~~~-~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 37 ETVIEARDLNVFYGD-EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred CceEEEEEEEEEECC-EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 346999999999964 689999999999999999999999999999999999997 6899999998541
Q ss_pred -cccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCch----HHhcCCCCccccCCCCCChhHH
Q 000711 510 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 584 (1338)
Q Consensus 510 -~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGqk 584 (1338)
.+++.++|+||++.++..|++||+.++...... ....++++.++++.+++.. ..++.+ .+||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~i~~~~~~~~--------~~LSgGe~ 186 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGY-DGDIDERVEESLRRAALWDEVKDQLDSSG--------LDLSGGQQ 186 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCC-cHHHHHHHHHHHHHcCCCchhHHHHhCCc--------ccCCHHHH
Confidence 235679999999998888999999875321110 1112456788899998853 333333 68999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHcc--CCeEEEEecChhhHh-hcceEE-EccC
Q 000711 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVL-SLDG 649 (1338)
Q Consensus 585 QRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~itH~~~~~~-~~d~i~-~l~~ 649 (1338)
||++|||||+++|+++||||||++||+.+.+.+.+.+++. ++|+|++||+++.+. .+|+++ ++++
T Consensus 187 qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~ 255 (285)
T PRK14254 187 QRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTG 255 (285)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeC
Confidence 9999999999999999999999999999999999988753 579999999999875 699976 4564
No 383
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-34 Score=319.06 Aligned_cols=202 Identities=21% Similarity=0.206 Sum_probs=161.5
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc-cCCcccEEEEc
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVP 1178 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~-~~lr~~i~~Vp 1178 (1338)
|+++||++.|++ +++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++... ...+.+++|+|
T Consensus 1 i~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (220)
T cd03265 1 IEVENLVKKYGD-FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVF 79 (220)
T ss_pred CEEEEEEEEECC-EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEec
Confidence 578999998864 5799999999999999999999999999999999999999999999999887543 22345799999
Q ss_pred CCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1179 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1179 QdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
|+|.+|.+ |+++|+.++.. ..+.. ....++.+.++++.+++....++. ...||
T Consensus 80 q~~~~~~~~tv~~~l~~~~~----------~~~~~------~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS 133 (220)
T cd03265 80 QDLSVDDELTGWENLYIHAR----------LYGVP------GAERRERIDELLDFVGLLEAADRL----------VKTYS 133 (220)
T ss_pred CCccccccCcHHHHHHHHHH----------HcCCC------HHHHHHHHHHHHHHcCCHHHhhCC----------hhhCC
Confidence 99999875 99999964310 00000 000123456677777775433322 24699
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
||||||++||||++.+|+++||||||++||+++.+.+.+.+++ .++|+|+|+|+++.+ .++|+++.|.+|+
T Consensus 134 ~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 134 GGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999999887776543 389999999999855 5799999997654
No 384
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=323.69 Aligned_cols=198 Identities=21% Similarity=0.217 Sum_probs=164.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCCc--------c
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS--------D 510 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~--------~ 510 (1338)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|.+. .
T Consensus 4 ~l~~~~l~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 82 (251)
T PRK14270 4 KMESKNLNLWYG-EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVE 82 (251)
T ss_pred EEEEEEeEEEEC-CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHH
Confidence 689999999986 46799999999999999999999999999999999999875 799999998641 2
Q ss_pred ccccEEEEecCCCCCCCCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCCchH----HhcCCCCccccCCCCCChhHHH
Q 000711 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQQ 585 (1338)
Q Consensus 511 ~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGqkQ 585 (1338)
.++.++|+||++.++..|++||+.++...... ......+++.++++.+++.+. .++. ...|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LS~G~~q 154 (251)
T PRK14270 83 LRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKS--------ALKLSGGQQQ 154 (251)
T ss_pred HHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCC--------cccCCHHHHH
Confidence 35679999999999889999999875321110 001123456778888887532 3332 3689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHcc--CCeEEEEecChhhHh-hcceEEEccCC
Q 000711 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 586 RlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
|++||||++++|+++||||||++||+.+...+.+.+++. ++|+|++||+++.+. .+|++++|+++
T Consensus 155 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G 222 (251)
T PRK14270 155 RLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMG 222 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECC
Confidence 999999999999999999999999999999999988752 689999999999865 69999999863
No 385
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=329.34 Aligned_cols=204 Identities=23% Similarity=0.324 Sum_probs=166.2
Q ss_pred ceEEeeeEEeCCC-ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--CCcccEE
Q 000711 1099 SISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIF 1175 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~-~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~--~lr~~i~ 1175 (1338)
.|+++||++.|++ .+++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.... ..+++|+
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 4899999999975 467999999999999999999999999999999999999999999999999987652 2345799
Q ss_pred EEcCCC--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCccc
Q 000711 1176 YVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1338)
Q Consensus 1176 ~VpQdP--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 1253 (1338)
|+||+| .++..|+++||.++... .+. .....+..+.++++.++|.....+. .
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~----------~~~------~~~~~~~~~~~~l~~~gL~~~~~~~----------~ 138 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLEN----------IGV------PREEMVERVDQALRQVGMEDFLNRE----------P 138 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhh----------CCC------CHHHHHHHHHHHHHHcCChhhhhCC----------c
Confidence 999999 46678999999764210 000 0000123355666777775554443 2
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
..||||||||++|||||+++|++|||||||++||+++.+.+.+.+++ .|+|+|+|+|+++.+..+|+++.|.+|.
T Consensus 139 ~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~ 217 (279)
T PRK13635 139 HRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGE 217 (279)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCE
Confidence 46999999999999999999999999999999999999988776643 3899999999998888899999997664
No 386
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=332.50 Aligned_cols=203 Identities=19% Similarity=0.215 Sum_probs=161.3
Q ss_pred eEEeeeEEeCCCc----cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcc---------
Q 000711 1100 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE--------- 1166 (1338)
Q Consensus 1100 I~f~nV~f~yp~~----~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~--------- 1166 (1338)
|+++||++.|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 7899999999753 369999999999999999999999999999999999999999999999876531
Q ss_pred -----------------ccCCcccEEEEcCCC--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHH
Q 000711 1167 -----------------EAGSGCGIFYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLK 1227 (1338)
Q Consensus 1167 -----------------~~~lr~~i~~VpQdP--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~ 1227 (1338)
....+++|+||||+| .+|..|++|||.++... .+. ..+..+..+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~----------~~~------~~~~~~~~~~ 146 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVS----------MGV------SKEEAKKRAA 146 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHH----------cCC------CHHHHHHHHH
Confidence 112345799999987 68888999999764210 000 0000123345
Q ss_pred HHHhhCCch-hhhhhhcccCcccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCC
Q 000711 1228 TILEGVRLS-YLLEREEVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGI 1303 (1338)
Q Consensus 1228 ~~l~~~~L~-~~i~~~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~ 1303 (1338)
++++.++|. +..++. ..+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.+++ .|+
T Consensus 147 ~~l~~~gL~~~~~~~~----------~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~ 216 (305)
T PRK13651 147 KYIELVGLDESYLQRS----------PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGK 216 (305)
T ss_pred HHHHHcCCChhhhhCC----------hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 667777774 232222 357999999999999999999999999999999999998887766543 489
Q ss_pred eEEEeccCCC-CcccccceEEEecCC
Q 000711 1304 TFVTSSQRPA-LIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1304 TvI~IAHRl~-~i~~~d~~l~l~~g~ 1328 (1338)
|||+|+|+++ ..+++|++++|.+|+
T Consensus 217 tiiivtHd~~~~~~~adrv~vl~~G~ 242 (305)
T PRK13651 217 TIILVTHDLDNVLEWTKRTIFFKDGK 242 (305)
T ss_pred EEEEEeeCHHHHHHhCCEEEEEECCE
Confidence 9999999997 558899999997764
No 387
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.6e-34 Score=340.46 Aligned_cols=207 Identities=19% Similarity=0.256 Sum_probs=168.3
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--CCcccEEE
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFY 1176 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~--~lr~~i~~ 1176 (1338)
.|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... .++++|++
T Consensus 3 ~L~~~nls~~y~~-~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~ 81 (402)
T PRK09536 3 MIDVSDLSVEFGD-TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVAS 81 (402)
T ss_pred eEEEeeEEEEECC-EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEE
Confidence 4899999999964 67999999999999999999999999999999999999999999999999988752 34567999
Q ss_pred EcCCCCC-CCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCC
Q 000711 1177 VPQRPYT-CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1338)
Q Consensus 1177 VpQdP~L-F~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 1255 (1338)
|||+|.+ |+.|++||+.++..... + .........++.+.++++.+++.++.++. ..+
T Consensus 82 v~q~~~l~~~~tv~e~v~~~~~~~~---------~---~~~~~~~~~~~~v~~~le~vgl~~~~~~~----------~~~ 139 (402)
T PRK09536 82 VPQDTSLSFEFDVRQVVEMGRTPHR---------S---RFDTWTETDRAAVERAMERTGVAQFADRP----------VTS 139 (402)
T ss_pred EccCCCCCCCCCHHHHHHhccchhc---------c---cccCCCHHHHHHHHHHHHHcCCchhhcCC----------hhh
Confidence 9999987 67899999976421000 0 00000111234567778888886554332 347
Q ss_pred CChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1256 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1256 LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
||||||||++|||||+++|+||||||||++||..+...+.+++++ .++|+|+++|+++.+ +++|+++.|.+|+
T Consensus 140 LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~ 216 (402)
T PRK09536 140 LSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGR 216 (402)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999998877776543 489999999999877 7899999997665
No 388
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.7e-34 Score=324.69 Aligned_cols=207 Identities=24% Similarity=0.261 Sum_probs=162.8
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCC-----CceEEcCCCCCccc----cCC
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVV-----SGSLTKPSQHIDEE----AGS 1170 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~-----sG~I~idg~dI~~~----~~l 1170 (1338)
|+++||++.|++ .++++|+||+|++||.++|+|+||||||||+++|.|+++|+ +|+|.+||.++... ...
T Consensus 2 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~ 80 (247)
T TIGR00972 2 IEIENLNLFYGE-KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVEL 80 (247)
T ss_pred EEEEEEEEEECC-eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHH
Confidence 789999999975 46999999999999999999999999999999999999998 99999999988652 233
Q ss_pred cccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC
Q 000711 1171 GCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1338)
Q Consensus 1171 r~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 1250 (1338)
+.+++||||+|.+|..|+++|+.++... .+. . .....+..+.++++.+++...++. -++.
T Consensus 81 ~~~i~~v~q~~~~~~~tv~e~l~~~~~~----------~~~---~--~~~~~~~~~~~~l~~~~l~~~~~~---~~~~-- 140 (247)
T TIGR00972 81 RRRVGMVFQKPNPFPMSIYDNIAYGPRL----------HGI---K--DKKELDEIVEESLKKAALWDEVKD---RLHD-- 140 (247)
T ss_pred HhheEEEecCcccCCCCHHHHHHhHHHh----------cCC---C--CHHHHHHHHHHHHHHcCCCcchhh---HhhC--
Confidence 5579999999999999999999753110 000 0 000012335566677766421100 0111
Q ss_pred cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCc-ccccceEEEecC
Q 000711 1251 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDG 1327 (1338)
Q Consensus 1251 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i-~~~d~~l~l~~g 1327 (1338)
....||||||||++||||++++|+++||||||++||+++.+.+.+++++ .++|+|+|+|+++.+ +++|+++.|.+|
T Consensus 141 -~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G 219 (247)
T TIGR00972 141 -SALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDG 219 (247)
T ss_pred -CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECC
Confidence 2357999999999999999999999999999999999999888777653 358999999999854 689999999776
Q ss_pred C
Q 000711 1328 E 1328 (1338)
Q Consensus 1328 ~ 1328 (1338)
+
T Consensus 220 ~ 220 (247)
T TIGR00972 220 E 220 (247)
T ss_pred E
Confidence 4
No 389
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=325.61 Aligned_cols=210 Identities=20% Similarity=0.198 Sum_probs=164.0
Q ss_pred CCceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCceEEcCCCCCccc----
Q 000711 1097 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP-----VVSGSLTKPSQHIDEE---- 1167 (1338)
Q Consensus 1097 ~g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~-----~~sG~I~idg~dI~~~---- 1167 (1338)
.+.|+++||++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++ |++|+|.+||.++...
T Consensus 11 ~~~l~~~~l~~~~~~-~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~ 89 (260)
T PRK10744 11 PSKIQVRNLNFYYGK-FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDI 89 (260)
T ss_pred CceEEEEEEEEEeCC-eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccch
Confidence 578999999999975 579999999999999999999999999999999999986 4899999999988532
Q ss_pred cCCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCc
Q 000711 1168 AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWD 1247 (1338)
Q Consensus 1168 ~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gld 1247 (1338)
...|.+++|+||+|.+|..|+++|+.++..... +. .....++.+.++++.+++...+... ++
T Consensus 90 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~---------~~------~~~~~~~~~~~~l~~~~l~~~~~~~---~~ 151 (260)
T PRK10744 90 ALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFE---------KL------SRAEMDERVEWALTKAALWNEVKDK---LH 151 (260)
T ss_pred HHHhcceEEEecCCccCcCcHHHHHhhhHhhcC---------CC------CHHHHHHHHHHHHHHcCCChhhHHH---Hh
Confidence 234567999999999999999999975321000 00 0000123345566666653211110 11
Q ss_pred ccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCc-ccccceEEE
Q 000711 1248 ANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRL 1324 (1338)
Q Consensus 1248 t~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i-~~~d~~l~l 1324 (1338)
. ...+||||||||++||||++++|++|||||||++||.++.+.+.+.+++ .+.|+|+|+|+++.+ +++|+++.|
T Consensus 152 ~---~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l 228 (260)
T PRK10744 152 Q---SGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFM 228 (260)
T ss_pred c---CCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEE
Confidence 1 2357999999999999999999999999999999999999888776653 378999999999865 689999999
Q ss_pred ecCC
Q 000711 1325 IDGE 1328 (1338)
Q Consensus 1325 ~~g~ 1328 (1338)
.+|+
T Consensus 229 ~~G~ 232 (260)
T PRK10744 229 YLGE 232 (260)
T ss_pred ECCE
Confidence 7664
No 390
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-34 Score=334.10 Aligned_cols=198 Identities=22% Similarity=0.283 Sum_probs=161.5
Q ss_pred cEEEEeEEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC----CCccEEEeCCCCc------c
Q 000711 444 YIEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP----LVSGHIAKPGVGS------D 510 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~---~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~----~~~G~i~~~~~~~------~ 510 (1338)
.++++||++.|++. ..+|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.+. +
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 48999999998653 469999999999999999999999999999999999998 4899999999651 1
Q ss_pred ----ccccEEEEecCCC--C-CCCCHHHHhcCCCCCC-cccCCCCHHHHHHHHHHcCCch---HHhcCCCCccccCCCCC
Q 000711 511 ----LNKEIFYVPQRPY--T-AVGTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLEY---LLDRYPPEKEINWGDEL 579 (1338)
Q Consensus 511 ----~~~~i~~v~Q~~~--l-~~~tl~eni~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~~~~~~g~~L 579 (1338)
.++.|+||||+|. + +..|+.+++..+.... ........+++.++++.++|.+ ..++.| .+|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p--------~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYP--------HQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCc--------hhC
Confidence 1246999999984 3 3357777665432110 0001123456889999999964 455555 689
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 580 SLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 580 SgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
|||||||++|||||+.+|+++|+||||++||+.++..+++.+++ .|.|+|+|||+++.+ ..+|+|++|.+
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~ 229 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYA 229 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999887754 489999999999988 57999999986
No 391
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-34 Score=302.94 Aligned_cols=161 Identities=30% Similarity=0.465 Sum_probs=144.9
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-----ccccccEEEEe
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP 519 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v~ 519 (1338)
++++|+++.|++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+|
T Consensus 1 l~~~~l~~~~~~-~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (173)
T cd03230 1 IEVRNLSKRYGK-KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEPEEVKRRIGYLP 79 (173)
T ss_pred CEEEEEEEEECC-eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccchHhhhccEEEEe
Confidence 468999999864 579999999999999999999999999999999999999999999999864 13356799999
Q ss_pred cCCCCCCC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000711 520 QRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1338)
Q Consensus 520 Q~~~l~~~-tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1338)
|+|.++.+ |++||+. ||||||||++||||++.+|+
T Consensus 80 q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~qrv~laral~~~p~ 115 (173)
T cd03230 80 EEPSLYENLTVRENLK--------------------------------------------LSGGMKQRLALAQALLHDPE 115 (173)
T ss_pred cCCccccCCcHHHHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCC
Confidence 99988775 8888863 99999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 599 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 599 illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
+++|||||++||+.+.+.+.+.+++ .|.|+|++||+++.+. .+|++++++++
T Consensus 116 illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g 171 (173)
T cd03230 116 LLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNG 171 (173)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCC
Confidence 9999999999999999999998764 3789999999999876 79999999763
No 392
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=339.83 Aligned_cols=204 Identities=19% Similarity=0.252 Sum_probs=167.6
Q ss_pred CceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEE
Q 000711 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYV 1177 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~V 1177 (1338)
..|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++......+++++||
T Consensus 18 ~~l~l~~v~~~~~~-~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~v 96 (377)
T PRK11607 18 PLLEIRNLTKSFDG-QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPINMM 96 (377)
T ss_pred ceEEEEeEEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 35999999999864 57999999999999999999999999999999999999999999999999987764445579999
Q ss_pred cCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCC
Q 000711 1178 PQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 1256 (1338)
Q Consensus 1178 pQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~L 1256 (1338)
+|+|.||.. |++|||.|+.... +. ........+.++++.++|.++.++. ..+|
T Consensus 97 fQ~~~lfp~ltv~eNi~~~l~~~----------~~------~~~~~~~~v~~~l~~l~L~~~~~~~----------~~~L 150 (377)
T PRK11607 97 FQSYALFPHMTVEQNIAFGLKQD----------KL------PKAEIASRVNEMLGLVHMQEFAKRK----------PHQL 150 (377)
T ss_pred eCCCccCCCCCHHHHHHHHHHHc----------CC------CHHHHHHHHHHHHHHcCCchhhcCC----------hhhC
Confidence 999999975 9999998763210 00 0000123456677777776554443 2469
Q ss_pred ChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHH----HHhcCCeEEEeccCCC-CcccccceEEEecCC
Q 000711 1257 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRL----AKDMGITFVTSSQRPA-LIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1257 SgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~----~~~~~~TvI~IAHRl~-~i~~~d~~l~l~~g~ 1328 (1338)
|||||||+||||||+++|++|+||||||+||..+.+.+.+. .++.|.|+|.|+|+++ ....+|++++|.+|+
T Consensus 151 SgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~ 227 (377)
T PRK11607 151 SGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGK 227 (377)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCE
Confidence 99999999999999999999999999999999998776543 3346899999999997 468899999997664
No 393
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-34 Score=336.09 Aligned_cols=188 Identities=23% Similarity=0.326 Sum_probs=163.5
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----------ccccc
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------DLNKE 514 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----------~~~~~ 514 (1338)
|++ |+++.|.+ +. + |+||++++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. ..+++
T Consensus 2 l~~-~l~k~~~~-~~-~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~ 77 (352)
T PRK11144 2 LEL-NFKQQLGD-LC-L-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKRR 77 (352)
T ss_pred eEE-EEEEEeCC-EE-E-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhCC
Confidence 667 89998853 33 3 89999999999999999999999999999999999999999998541 12467
Q ss_pred EEEEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000711 515 IFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1338)
Q Consensus 515 i~~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1338)
++|+||++.+++ .|++||+.|+... ...+++.++++.+++.++.++.| .+||||||||++|||||
T Consensus 78 i~~v~q~~~l~~~~tv~enl~~~~~~------~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgGq~qRvalaraL 143 (352)
T PRK11144 78 IGYVFQDARLFPHYKVRGNLRYGMAK------SMVAQFDKIVALLGIEPLLDRYP--------GSLSGGEKQRVAIGRAL 143 (352)
T ss_pred EEEEcCCcccCCCCcHHHHHHhhhhh------hhHHHHHHHHHHcCCchhhhCCc--------ccCCHHHHHHHHHHHHH
Confidence 999999998876 5999999987431 23467889999999998888876 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 594 ~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
+++|+++||||||++||+.+++.+.+.+++ .|+|+|+|||+++.+ ..+|++++|+++
T Consensus 144 ~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G 205 (352)
T PRK11144 144 LTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQG 205 (352)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCC
Confidence 999999999999999999999999887764 389999999999876 579999999863
No 394
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.9e-34 Score=337.13 Aligned_cols=186 Identities=27% Similarity=0.330 Sum_probs=159.0
Q ss_pred CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCC----C-c-----c---c-cccEEEEecCC
Q 000711 457 GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGV----G-S-----D---L-NKEIFYVPQRP 522 (1338)
Q Consensus 457 ~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~----~-~-----~---~-~~~i~~v~Q~~ 522 (1338)
...+++|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|. + . . . +++++||||++
T Consensus 36 ~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~ 115 (382)
T TIGR03415 36 LVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKF 115 (382)
T ss_pred CEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCC
Confidence 457899999999999999999999999999999999999999999999984 2 0 1 1 25799999999
Q ss_pred CCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000711 523 YTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAI 601 (1338)
Q Consensus 523 ~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ill 601 (1338)
.+++ .|++||+.|+............+++.++++.++|.++.++.| .+||||||||++|||||+++|+++|
T Consensus 116 ~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~--------~~LSgGq~QRV~LARALa~~P~ILL 187 (382)
T TIGR03415 116 ALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP--------GELSGGMQQRVGLARAFAMDADILL 187 (382)
T ss_pred cCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9887 699999998743211111112356788999999998888876 6899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 602 LDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 602 LDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
||||||+||+.+...+++.+.+ .++|+|+|||+++.+ +.+|+|++|+++
T Consensus 188 lDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G 241 (382)
T TIGR03415 188 MDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGG 241 (382)
T ss_pred EECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 9999999999999999988753 389999999999986 679999999873
No 395
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-34 Score=324.02 Aligned_cols=197 Identities=24% Similarity=0.293 Sum_probs=162.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCCc--------c
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS--------D 510 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~--------~ 510 (1338)
.++++||++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. .
T Consensus 4 ~l~i~~v~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~ 82 (258)
T PRK14241 4 RIDVKDLNIYYGS-FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVA 82 (258)
T ss_pred cEEEeeEEEEECC-EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHH
Confidence 5899999999964 6799999999999999999999999999999999999974 799999998541 2
Q ss_pred ccccEEEEecCCCCCC-CCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCCch----HHhcCCCCccccCCCCCChhHH
Q 000711 511 LNKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 584 (1338)
Q Consensus 511 ~~~~i~~v~Q~~~l~~-~tl~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGqk 584 (1338)
+++.++|++|++.++. .|++||+.++...... .....++++.++++.+++.+ ..++. ..+||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LS~G~~ 154 (258)
T PRK14241 83 VRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKP--------GGGLSGGQQ 154 (258)
T ss_pred HhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCC--------cccCCHHHH
Confidence 3467999999998876 5999999865321110 01112345677888888853 33332 368999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 585 QRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
||++||||++.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+ +.+|+++++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~ 222 (258)
T PRK14241 155 QRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNL 222 (258)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEec
Confidence 999999999999999999999999999999999998865 368999999999986 57999999973
No 396
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=323.34 Aligned_cols=197 Identities=21% Similarity=0.226 Sum_probs=163.2
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC-----CCccEEEeCCCCc--------cc
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS--------DL 511 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~--------~~ 511 (1338)
-+++||++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.+. .+
T Consensus 6 ~~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 84 (251)
T PRK14244 6 ASVKNLNLWYG-SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLL 84 (251)
T ss_pred EEeeeEEEEEC-CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHH
Confidence 46899999985 4689999999999999999999999999999999999986 4799999998641 23
Q ss_pred cccEEEEecCCCCCCCCHHHHhcCCCCCCcc--cCCCCHHHHHHHHHHcCCchH----HhcCCCCccccCCCCCChhHHH
Q 000711 512 NKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE--VEPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQQ 585 (1338)
Q Consensus 512 ~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGqkQ 585 (1338)
++.++|+||++.++.+|++||+.++...... .....++++.++++.+++.+. .++. ..+|||||||
T Consensus 85 ~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LS~Gq~q 156 (251)
T PRK14244 85 RAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDS--------AFELSGGQQQ 156 (251)
T ss_pred hhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcC--------hhhCCHHHHH
Confidence 5679999999998888999999875211100 001123456788999998653 2232 3689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 586 RlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
|++||||++.+|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|++++|+++
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G 224 (251)
T PRK14244 157 RLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSG 224 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECC
Confidence 99999999999999999999999999999999988865 3799999999999875 69999999863
No 397
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=4.1e-34 Score=316.85 Aligned_cols=196 Identities=23% Similarity=0.273 Sum_probs=160.2
Q ss_pred EEEEeEEEEcCC------CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCC----Cc-----
Q 000711 445 IEFSGVKVVTPT------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGV----GS----- 509 (1338)
Q Consensus 445 i~~~~v~~~~~~------~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~----~~----- 509 (1338)
++++|+++.|++ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. +.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 789999999863 247999999999999999999999999999999999999999999999842 20
Q ss_pred ----cc-cccEEEEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHH-hcCCCCccccCCCCCChh
Q 000711 510 ----DL-NKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLL-DRYPPEKEINWGDELSLG 582 (1338)
Q Consensus 510 ----~~-~~~i~~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~~g~~LSgG 582 (1338)
+. ++.++|+||+|.++. .|++||+.++............+++.++++.+++.+.. ++. ..+||||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~~LS~G 153 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLWHLP--------PATFSGG 153 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhhCC--------cccCCHH
Confidence 01 246999999998765 59999997642211110111234667888999987643 433 3689999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEcc
Q 000711 583 EQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLD 648 (1338)
Q Consensus 583 qkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~ 648 (1338)
||||++|||||+.+|++++|||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||+++.+.
T Consensus 154 ~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~~ 223 (224)
T TIGR02324 154 EQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDVT 223 (224)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEecC
Confidence 99999999999999999999999999999999999998764 4899999999999875 799998764
No 398
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.4e-34 Score=322.63 Aligned_cols=212 Identities=20% Similarity=0.256 Sum_probs=165.4
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc---CCcccEE
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIF 1175 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~---~lr~~i~ 1175 (1338)
-|+++|+++.|++ +++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++.... ..+.+++
T Consensus 2 ~i~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (242)
T TIGR03411 2 ILYLEGLSVSFDG-FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIG 80 (242)
T ss_pred eEEEEeeEEEcCC-eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCee
Confidence 3789999999975 57999999999999999999999999999999999999999999999999887542 2344699
Q ss_pred EEcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccC
Q 000711 1176 YVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1338)
Q Consensus 1176 ~VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 1254 (1338)
|+||+|.+|.+ |++||+.++......... ...+. ..+..+..+.++++.+++....+. ...
T Consensus 81 ~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~l~~~~l~~~~~~----------~~~ 142 (242)
T TIGR03411 81 RKFQKPTVFENLTVFENLELALPRDKSVFA--SLFFR------LSAEEKDRIEEVLETIGLADEADR----------LAG 142 (242)
T ss_pred EeccccccCCCCCHHHHHHHhhhccccccc--ccccc------cHHHHHHHHHHHHHHcCCchhhcC----------Chh
Confidence 99999999987 999999764211000000 00000 000113345666776666433221 135
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCc-ccccceEEEecCCC
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDGEG 1329 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i-~~~d~~l~l~~g~g 1329 (1338)
.||||||||++||||++++|++|+||||||+||.++.+.+.+.+++ .++|+|+|+|+++.+ +++|+++.|.+|+-
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~ 220 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSV 220 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeE
Confidence 7999999999999999999999999999999999999988877654 378999999999876 57999999977653
No 399
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.2e-32 Score=302.80 Aligned_cols=188 Identities=23% Similarity=0.260 Sum_probs=140.3
Q ss_pred CceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEE
Q 000711 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYV 1177 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~V 1177 (1338)
..+-+.||+|.||+..|++++++|-|.--.+|+||||+|.||||++.+|.|-.+|..|+...+ .|.+|++.
T Consensus 585 PvLGlH~VtFgy~gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKn---------hrL~iG~F 655 (807)
T KOG0066|consen 585 PVLGLHDVTFGYPGQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKN---------HRLRIGWF 655 (807)
T ss_pred CeeecccccccCCCCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhcc---------ceeeeech
Confidence 357899999999999999999999999999999999999999999999999999999987633 34578887
Q ss_pred cCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCc--ccCC
Q 000711 1178 PQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN--WEDI 1255 (1338)
Q Consensus 1178 pQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~--~g~~ 1255 (1338)
-|.. .|.|.......+- -+... +.........|...|| .+... .-..
T Consensus 656 dQh~-------~E~L~~Eetp~Ey---Lqr~F----------Nlpyq~ARK~LG~fGL-----------~sHAHTikikd 704 (807)
T KOG0066|consen 656 DQHA-------NEALNGEETPVEY---LQRKF----------NLPYQEARKQLGTFGL-----------ASHAHTIKIKD 704 (807)
T ss_pred hhhh-------HHhhccccCHHHH---HHHhc----------CCChHHHHHHhhhhhh-----------hhccceEeeee
Confidence 7764 1222110000000 01111 1112222333333333 32221 1245
Q ss_pred CChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHhcCCeEEEeccCCCCcccccceEEEe
Q 000711 1256 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLI 1325 (1338)
Q Consensus 1256 LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~~~~TvI~IAHRl~~i~~~d~~l~l~ 1325 (1338)
||||||-|+++|-.-|+.|+||||||||.+||.++..++-+.+++..-.||+|+|.-.+|.-.|-.|...
T Consensus 705 LSGGQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney~GgVi~VsHDeRLi~eT~C~LwVv 774 (807)
T KOG0066|consen 705 LSGGQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEYNGGVIMVSHDERLIVETDCNLWVV 774 (807)
T ss_pred cCCcchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhccCcEEEEecccceeeecCceEEEE
Confidence 9999999999999999999999999999999999999999999888889999999998887766666553
No 400
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.4e-34 Score=319.41 Aligned_cols=204 Identities=25% Similarity=0.334 Sum_probs=164.9
Q ss_pred eEEeeeEEeCCCc---cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-----CCc
Q 000711 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSG 1171 (1338)
Q Consensus 1100 I~f~nV~f~yp~~---~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~-----~lr 1171 (1338)
++|+||++.|++. +++|+|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.... ..+
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 7899999998642 67999999999999999999999999999999999999999999999999887542 234
Q ss_pred ccEEEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC
Q 000711 1172 CGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1338)
Q Consensus 1172 ~~i~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 1250 (1338)
.+++|+||+|.+|. .|+.+|+.++...... . .....+..+.++++.+++.+..++.
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~---------~------~~~~~~~~~~~~l~~~~l~~~~~~~-------- 138 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPN---------L------SYQEARERARAMLEAVGLGDHLDYY-------- 138 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccC---------C------CHHHHHHHHHHHHHHcCChhhhhcC--------
Confidence 57999999999997 7999999753110000 0 0000123355667777775444332
Q ss_pred cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCcccccceEEEec
Q 000711 1251 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLID 1326 (1338)
Q Consensus 1251 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i~~~d~~l~l~~ 1326 (1338)
...||+|||||++||||++++|++|||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+.++|++++|.+
T Consensus 139 --~~~lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~ 216 (220)
T TIGR02982 139 --PHNLSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMED 216 (220)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEEC
Confidence 246999999999999999999999999999999999998887766532 48999999999998899999999976
Q ss_pred CC
Q 000711 1327 GE 1328 (1338)
Q Consensus 1327 g~ 1328 (1338)
|+
T Consensus 217 g~ 218 (220)
T TIGR02982 217 GK 218 (220)
T ss_pred CE
Confidence 53
No 401
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=3.2e-34 Score=311.13 Aligned_cols=187 Identities=26% Similarity=0.359 Sum_probs=157.6
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-----ccccccEEEEe
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP 519 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v~ 519 (1338)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+|
T Consensus 1 l~~~~l~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (198)
T TIGR01189 1 LAARNLACSRG-ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQRDEPHRNILYLG 79 (198)
T ss_pred CEEEEEEEEEC-CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccchHHhhhheEEec
Confidence 46899999885 4689999999999999999999999999999999999999999999999864 12346799999
Q ss_pred cCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000711 520 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1338)
Q Consensus 520 Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1338)
|++.++. .|++||+.+...... ..+.++.++++.+++++..++.+ .+||||||||++||||++++|+
T Consensus 80 q~~~~~~~~tv~~~l~~~~~~~~----~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~~~p~ 147 (198)
T TIGR01189 80 HLPGLKPELSALENLHFWAAIHG----GAQRTIEDALAAVGLTGFEDLPA--------AQLSAGQQRRLALARLWLSRAP 147 (198)
T ss_pred cCcccccCCcHHHHHHHHHHHcC----CcHHHHHHHHHHcCCHHHhcCCh--------hhcCHHHHHHHHHHHHHhcCCC
Confidence 9998765 699999976532111 12346788999999988877655 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHhhcceEE
Q 000711 599 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVL 645 (1338)
Q Consensus 599 illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~~~d~i~ 645 (1338)
+++|||||++||+.+.+.+.+.+++ .|.|+|++||+...+. +++++
T Consensus 148 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~-~~~~~ 196 (198)
T TIGR01189 148 LWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGLV-EAREL 196 (198)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEccccccc-ceEEe
Confidence 9999999999999999999988864 4889999999985433 34444
No 402
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-34 Score=321.38 Aligned_cols=202 Identities=22% Similarity=0.225 Sum_probs=164.2
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCC-----ccEEEeCCCCc--------c
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV-----SGHIAKPGVGS--------D 510 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~-----~G~i~~~~~~~--------~ 510 (1338)
.++++|+++.|+ ++++++|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.+. .
T Consensus 4 ~l~~~~l~~~~~-~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~ 82 (251)
T PRK14249 4 KIKIRGVNFFYH-KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVN 82 (251)
T ss_pred eEEEEEEEEEEC-CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHH
Confidence 589999999986 467999999999999999999999999999999999999997 69999998541 2
Q ss_pred ccccEEEEecCCCCCCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHH
Q 000711 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1338)
Q Consensus 511 ~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1338)
+++.++|+||+|.++..|++||+.++....... ....++.+.++++.+++.+.+.... .....+||||||||++|
T Consensus 83 ~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~----~~~~~~LS~Gq~qrv~l 158 (251)
T PRK14249 83 LRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNL----HKSGLALSGGQQQRLCI 158 (251)
T ss_pred hhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHh----hCCcccCCHHHHHHHHH
Confidence 356799999999988889999998763211100 0112345666777788754322110 01236899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 590 ARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .||++++|+++
T Consensus 159 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G 222 (251)
T PRK14249 159 ARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTG 222 (251)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCC
Confidence 9999999999999999999999999999888765 3789999999999876 57999999863
No 403
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=328.12 Aligned_cols=205 Identities=23% Similarity=0.275 Sum_probs=165.8
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEE
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFY 1176 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~ 1176 (1338)
-++++||+++|++..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++... ...+.+++|
T Consensus 3 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (277)
T PRK13652 3 LIETRDLCYSYSGSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGL 82 (277)
T ss_pred eEEEEEEEEEeCCCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEE
Confidence 378999999997666799999999999999999999999999999999999999999999999988653 233457999
Q ss_pred EcCCC--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccC
Q 000711 1177 VPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1338)
Q Consensus 1177 VpQdP--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 1254 (1338)
|||+| .+|..|+++|+.++... .+. .++..+..+.++++.+++.....+. ..
T Consensus 83 v~q~~~~~~~~~tv~~~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~ 136 (277)
T PRK13652 83 VFQNPDDQIFSPTVEQDIAFGPIN----------LGL------DEETVAHRVSSALHMLGLEELRDRV----------PH 136 (277)
T ss_pred EecCcccccccccHHHHHHhHHHH----------cCC------CHHHHHHHHHHHHHHCCChhHhcCC----------cc
Confidence 99998 47888999999753210 000 0000123355677777775544433 34
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEecCCC
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGEG 1329 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~~g~g 1329 (1338)
.||||||||++|||||+++|++|||||||++||+.+.+.+.+.+++ .++|+|+++|+++.+ +++|+++.|.+|.-
T Consensus 137 ~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i 216 (277)
T PRK13652 137 HLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRI 216 (277)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeE
Confidence 6999999999999999999999999999999999999887766542 389999999999876 78999999977653
No 404
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=324.80 Aligned_cols=209 Identities=22% Similarity=0.243 Sum_probs=164.0
Q ss_pred CceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCceEEcCCCCCccc----c
Q 000711 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV-----VSGSLTKPSQHIDEE----A 1168 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~-----~sG~I~idg~dI~~~----~ 1168 (1338)
..|+++||+++|++ +++|+|+||+|++||.++|+|+||||||||+++|.|+++| .+|+|.+||.++... .
T Consensus 6 ~~l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 6 AIIETENLNLFYTD-FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred ceEEEeeeEEEeCC-ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 47999999999964 5799999999999999999999999999999999999987 489999999988532 2
Q ss_pred CCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcc
Q 000711 1169 GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1338)
Q Consensus 1169 ~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 1248 (1338)
..+.+++||||+|.+|..|++|||.++... .+.. .....++.+.++++.+++...+ ++.+++
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~----------~~~~-----~~~~~~~~~~~~l~~~~l~~~l---~~~~~~ 146 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKI----------HGTK-----DKKKLDEIVEQSLKKSALWNEV---KDKLNT 146 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHh----------cCCC-----CHHHHHHHHHHHHHHhCCchhh---HHHHhC
Confidence 335679999999999999999999754210 0000 0000123345556666553211 122333
Q ss_pred cCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCc-ccccceEEEe
Q 000711 1249 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLI 1325 (1338)
Q Consensus 1249 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i-~~~d~~l~l~ 1325 (1338)
. ..+||||||||++||||++++|++|||||||++||..+.+.+.+++++ .++|+|+|+|+++.+ +++|+++.|.
T Consensus 147 ~---~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~ 223 (254)
T PRK14273 147 N---ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFL 223 (254)
T ss_pred C---cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 3 357999999999999999999999999999999999999888776644 378999999999865 6799999997
Q ss_pred cCC
Q 000711 1326 DGE 1328 (1338)
Q Consensus 1326 ~g~ 1328 (1338)
+|+
T Consensus 224 ~G~ 226 (254)
T PRK14273 224 NGC 226 (254)
T ss_pred CCE
Confidence 664
No 405
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-34 Score=325.60 Aligned_cols=199 Identities=21% Similarity=0.215 Sum_probs=162.4
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC-----CCccEEEeCCCCc--------
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS-------- 509 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~-------- 509 (1338)
..++++|+++.|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 23 ~~l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 101 (271)
T PRK14238 23 VVFDTQNLNLWYGE-DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSVE 101 (271)
T ss_pred eEEEEeeeEEEECC-cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccHH
Confidence 46999999999864 579999999999999999999999999999999999987 6999999998541
Q ss_pred cccccEEEEecCCCCCCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCc----hHHhcCCCCccccCCCCCChhHH
Q 000711 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLE----YLLDRYPPEKEINWGDELSLGEQ 584 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~~~~~~g~~LSgGqk 584 (1338)
.+++.++|+||+|.++..|++||+.++....... ....++.+.++++.+++. +..++. ...||||||
T Consensus 102 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--------~~~LSgGe~ 173 (271)
T PRK14238 102 ELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--------AYGLSGGQQ 173 (271)
T ss_pred HHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhcC--------cccCCHHHH
Confidence 2356799999999998889999998753211100 001123455667666543 223332 368999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 585 QRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
||++|||||+++|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .||++++|+++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G 242 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNG 242 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999998865 3789999999999875 79999999863
No 406
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=324.74 Aligned_cols=208 Identities=19% Similarity=0.208 Sum_probs=165.3
Q ss_pred CCceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc---------
Q 000711 1097 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--------- 1167 (1338)
Q Consensus 1097 ~g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--------- 1167 (1338)
.+.|+++||++.|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.++|.++...
T Consensus 3 ~~~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (257)
T PRK10619 3 ENKLNVIDLHKRYGE-HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKV 81 (257)
T ss_pred CccEEEeeeEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccccc
Confidence 467999999999974 5799999999999999999999999999999999999999999999999887531
Q ss_pred ------cCCcccEEEEcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhh-
Q 000711 1168 ------AGSGCGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLL- 1239 (1338)
Q Consensus 1168 ------~~lr~~i~~VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i- 1239 (1338)
...+.+++||||+|.+|.+ |++||+.++... ..+. .....+..+.++++.+++....
T Consensus 82 ~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~---------~~~~------~~~~~~~~~~~~l~~~gl~~~~~ 146 (257)
T PRK10619 82 ADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQ---------VLGL------SKQEARERAVKYLAKVGIDERAQ 146 (257)
T ss_pred ccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHH---------hCCC------CHHHHHHHHHHHHHHcCCChhhh
Confidence 1234579999999999975 999999752100 0000 0000123355666766664332
Q ss_pred hhhcccCcccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCcc
Q 000711 1240 EREEVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIP 1316 (1338)
Q Consensus 1240 ~~~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i~ 1316 (1338)
++ ....||||||||++|||||+++|+++||||||++||+++.+.+.+.+++ .|+|+|+|+|+++.+.
T Consensus 147 ~~----------~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~ 216 (257)
T PRK10619 147 GK----------YPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFAR 216 (257)
T ss_pred hC----------CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH
Confidence 11 2357999999999999999999999999999999999999888776543 4899999999998766
Q ss_pred -cccceEEEecCCCC
Q 000711 1317 -FHSLELRLIDGEGN 1330 (1338)
Q Consensus 1317 -~~d~~l~l~~g~g~ 1330 (1338)
++|+++.|.+|+--
T Consensus 217 ~~~d~i~~l~~G~i~ 231 (257)
T PRK10619 217 HVSSHVIFLHQGKIE 231 (257)
T ss_pred HhcCEEEEEECCEEE
Confidence 68999999877643
No 407
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=5.8e-34 Score=322.31 Aligned_cols=198 Identities=21% Similarity=0.293 Sum_probs=162.2
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-----c-c------
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----S-D------ 510 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~-~------ 510 (1338)
..++++|+++.|++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ . .
T Consensus 5 ~~l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 5 PLLSVRGLTKLYGP-RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred ceEEEeeeEEEcCC-ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 36899999999964 689999999999999999999999999999999999999999999999864 1 1
Q ss_pred ---ccccEEEEecCCC--C-CCCCHHHHhcCCCCCCc-ccCCCCHHHHHHHHHHcCCch-HHhcCCCCccccCCCCCChh
Q 000711 511 ---LNKEIFYVPQRPY--T-AVGTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEY-LLDRYPPEKEINWGDELSLG 582 (1338)
Q Consensus 511 ---~~~~i~~v~Q~~~--l-~~~tl~eni~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~g~~LSgG 582 (1338)
.++.++|+||++. + +..|+.+|+.++..... ........++.++++.+++.+ ..++.+ .+||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LS~G 155 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLP--------TTFSGG 155 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCC--------ccCCHH
Confidence 1346999999983 3 33588888865321000 000112345677888888863 555544 689999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 583 EQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 583 qkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
||||++|||||+++|+++||||||++||+.+++.+.+.+++ .|.|+|++||+++.+. .+|+++++++
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~ 227 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQ 227 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 99999999999999999999999999999999999888753 3889999999999986 7999999986
No 408
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.3e-34 Score=318.48 Aligned_cols=202 Identities=22% Similarity=0.295 Sum_probs=163.1
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--CCcccEEE
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFY 1176 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~--~lr~~i~~ 1176 (1338)
.|+++||++.|++ .++++|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++.... ..+.+++|
T Consensus 7 ~i~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 85 (225)
T PRK10247 7 LLQLQNVGYLAGD-AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVSY 85 (225)
T ss_pred eEEEeccEEeeCC-ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccEE
Confidence 5999999999864 57999999999999999999999999999999999999999999999999887542 23457999
Q ss_pred EcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchh-hhhhhcccCcccCcccCC
Q 000711 1177 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY-LLEREEVGWDANLNWEDI 1255 (1338)
Q Consensus 1177 VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~-~i~~~~~Gldt~~~~g~~ 1255 (1338)
+||+|.+|+.|++||+.++... .+. ...+..+.++++.+++.. ...+ ...+
T Consensus 86 ~~q~~~l~~~tv~enl~~~~~~----------~~~--------~~~~~~~~~~l~~~~l~~~~~~~----------~~~~ 137 (225)
T PRK10247 86 CAQTPTLFGDTVYDNLIFPWQI----------RNQ--------QPDPAIFLDDLERFALPDTILTK----------NIAE 137 (225)
T ss_pred EecccccccccHHHHHHhHHhh----------cCC--------ChHHHHHHHHHHHcCCChHHhcC----------Cccc
Confidence 9999999999999999753100 000 001223445666666631 2111 2357
Q ss_pred CChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCcccccceEEEecCCC
Q 000711 1256 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLIDGEG 1329 (1338)
Q Consensus 1256 LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i~~~d~~l~l~~g~g 1329 (1338)
||+|||||++||||++++|+++||||||++||..+.+.+.+.+++ .++|+|+|+|+++.++.+|+++.|.+..|
T Consensus 138 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~ 215 (225)
T PRK10247 138 LSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAG 215 (225)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccc
Confidence 999999999999999999999999999999999998887765543 48999999999998889999999954333
No 409
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.7e-34 Score=323.83 Aligned_cols=204 Identities=21% Similarity=0.244 Sum_probs=161.7
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc----------c
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE----------A 1168 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~----------~ 1168 (1338)
-++++||++.|++ +++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++... .
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (250)
T PRK11264 3 AIEVKNLVKKFHG-QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIR 81 (250)
T ss_pred cEEEeceEEEECC-eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHH
Confidence 3899999999974 5699999999999999999999999999999999999999999999999988642 1
Q ss_pred CCcccEEEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCc
Q 000711 1169 GSGCGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWD 1247 (1338)
Q Consensus 1169 ~lr~~i~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gld 1247 (1338)
..+.+++||||+|.+|. .|++||+.++.... + +. ......+.+.++++.+++....++
T Consensus 82 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~-------~--~~------~~~~~~~~~~~~l~~~gl~~~~~~------ 140 (250)
T PRK11264 82 QLRQHVGFVFQNFNLFPHRTVLENIIEGPVIV-------K--GE------PKEEATARARELLAKVGLAGKETS------ 140 (250)
T ss_pred HhhhhEEEEecCcccCCCCCHHHHHHHHHHHh-------c--CC------CHHHHHHHHHHHHHHcCCcchhhC------
Confidence 23457999999999886 69999996521000 0 00 000012234556666666432211
Q ss_pred ccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEE
Q 000711 1248 ANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELR 1323 (1338)
Q Consensus 1248 t~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~ 1323 (1338)
...+||||||||++||||++++|++|||||||++||+++.+.+.+.+++ .++|+|+|+|+++.+ +++|+++.
T Consensus 141 ----~~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~ 216 (250)
T PRK11264 141 ----YPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIF 216 (250)
T ss_pred ----ChhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEE
Confidence 2357999999999999999999999999999999999999888776543 489999999999866 67999999
Q ss_pred EecCC
Q 000711 1324 LIDGE 1328 (1338)
Q Consensus 1324 l~~g~ 1328 (1338)
|.+|+
T Consensus 217 l~~G~ 221 (250)
T PRK11264 217 MDQGR 221 (250)
T ss_pred EECCE
Confidence 97764
No 410
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-34 Score=314.81 Aligned_cols=189 Identities=25% Similarity=0.355 Sum_probs=160.0
Q ss_pred EEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----------cccccE
Q 000711 446 EFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------DLNKEI 515 (1338)
Q Consensus 446 ~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----------~~~~~i 515 (1338)
++ ||++.|++ +.+ |+||++++ |+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.+
T Consensus 3 ~~-~l~~~~~~-~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 77 (214)
T cd03297 3 CV-DIEKRLPD-FTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKI 77 (214)
T ss_pred ee-eeeEecCC-eee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcE
Confidence 44 89999965 344 99999999 99999999999999999999999999999999998541 134579
Q ss_pred EEEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 516 FYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 516 ~~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
+|+||++.++. .|++||+.++..... ....++++.++++.+++.+..++.+ .+||||||||++||||++
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~ 147 (214)
T cd03297 78 GLVFQQYALFPHLNVRENLAFGLKRKR--NREDRISVDELLDLLGLDHLLNRYP--------AQLSGGEKQRVALARALA 147 (214)
T ss_pred EEEecCCccCCCCCHHHHHHHHHhhCC--HHHHHHHHHHHHHHcCCHhHhhcCc--------ccCCHHHHHHHHHHHHHh
Confidence 99999998875 599999987532110 1123456788999999988777655 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..+|++++|++
T Consensus 148 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 207 (214)
T cd03297 148 AQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMED 207 (214)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEEC
Confidence 99999999999999999999999988764 289999999999987 47999999986
No 411
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.6e-34 Score=315.56 Aligned_cols=200 Identities=20% Similarity=0.227 Sum_probs=161.5
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcC
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQ 1179 (1338)
++++||+++|+. +++|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.+....+.+++||||
T Consensus 1 ~~~~~l~~~~~~---~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q 77 (213)
T TIGR01277 1 LALDKVRYEYEH---LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLFQ 77 (213)
T ss_pred CeEEeeeEEeCC---cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEec
Confidence 368999999963 57899999999999999999999999999999999999999999999988765444567999999
Q ss_pred CCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCCh
Q 000711 1180 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1338)
Q Consensus 1180 dP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 1258 (1338)
+|.+|.+ |++||+.++..... . .....+..+.++++.+++.....+. ...||+
T Consensus 78 ~~~~~~~~t~~en~~~~~~~~~---------~-------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 131 (213)
T TIGR01277 78 ENNLFAHLTVRQNIGLGLHPGL---------K-------LNAEQQEKVVDAAQQVGIADYLDRL----------PEQLSG 131 (213)
T ss_pred cCccCCCCcHHHHHHhHhhccC---------C-------ccHHHHHHHHHHHHHcCcHHHhhCC----------cccCCH
Confidence 9999975 99999975421000 0 0000123455677777775544333 246999
Q ss_pred hHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1259 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1259 GQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
|||||++||||++++|+++||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+ +++|+++.|.+|+
T Consensus 132 G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~ 206 (213)
T TIGR01277 132 GQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGK 206 (213)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCe
Confidence 999999999999999999999999999999999888776543 389999999999865 6799999997653
No 412
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-34 Score=329.70 Aligned_cols=203 Identities=22% Similarity=0.240 Sum_probs=160.7
Q ss_pred eEEeeeEEeCCCc----cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc------cC
Q 000711 1100 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------AG 1169 (1338)
Q Consensus 1100 I~f~nV~f~yp~~----~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~------~~ 1169 (1338)
|+++||++.|++. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++... ..
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 7899999999752 4799999999999999999999999999999999999999999999999988653 12
Q ss_pred CcccEEEEcCCC--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchh-hhhhhcccC
Q 000711 1170 SGCGIFYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY-LLEREEVGW 1246 (1338)
Q Consensus 1170 lr~~i~~VpQdP--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~-~i~~~~~Gl 1246 (1338)
.+.+|+|+||+| .+|++|+++|+.++... .+.. .+.....+.++++.++|.. ..++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~~~~~----- 141 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQN----------FGVS------QEEAEALAREKLALVGISESLFEK----- 141 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHcCCChhhhhC-----
Confidence 345799999998 68889999999753110 0000 0001122344555555531 1111
Q ss_pred cccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceE
Q 000711 1247 DANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLEL 1322 (1338)
Q Consensus 1247 dt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l 1322 (1338)
....||||||||++||||++++|++|||||||++||+++.+.+.+.+++ .++|||+|+|+++.+ .++|+++
T Consensus 142 -----~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~ 216 (280)
T PRK13649 142 -----NPFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVY 216 (280)
T ss_pred -----CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEE
Confidence 2357999999999999999999999999999999999999888776543 489999999999865 6899999
Q ss_pred EEecCC
Q 000711 1323 RLIDGE 1328 (1338)
Q Consensus 1323 ~l~~g~ 1328 (1338)
.|.+|+
T Consensus 217 ~l~~G~ 222 (280)
T PRK13649 217 VLEKGK 222 (280)
T ss_pred EEECCE
Confidence 997664
No 413
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-34 Score=329.85 Aligned_cols=206 Identities=18% Similarity=0.165 Sum_probs=161.6
Q ss_pred CCceEEeeeEEeCCCc----cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcc------
Q 000711 1097 QDSISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE------ 1166 (1338)
Q Consensus 1097 ~g~I~f~nV~f~yp~~----~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~------ 1166 (1338)
.|.|+++||+++|++. .++|+|+||+|++||.+||+||||||||||+++|.|+++|.+|+|.++|.++..
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 4789999999999754 259999999999999999999999999999999999999999999999988742
Q ss_pred -ccCCcccEEEEcCCC--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCch-hhhhhh
Q 000711 1167 -EAGSGCGIFYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLERE 1242 (1338)
Q Consensus 1167 -~~~lr~~i~~VpQdP--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~-~~i~~~ 1242 (1338)
....|.+++||||+| .+|..|+++|+.++... .+. ..+.....+.++++.++|. ....+
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~----------~~~------~~~~~~~~~~~ll~~~~L~~~~~~~- 146 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVN----------LGE------NKQEAYKKVPELLKLVQLPEDYVKR- 146 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHH----------cCC------CHHHHHHHHHHHHHHcCCChhHhcC-
Confidence 123455799999998 47788999999753110 000 0000112234455555552 12111
Q ss_pred cccCcccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCC-ccc
Q 000711 1243 EVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPAL-IPF 1317 (1338)
Q Consensus 1243 ~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~-i~~ 1317 (1338)
....||||||||++||||++++|++|||||||++||+++.+.+.+.+++ .++|+|+|+|+++. .++
T Consensus 147 ---------~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~ 217 (289)
T PRK13645 147 ---------SPFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRI 217 (289)
T ss_pred ---------ChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHh
Confidence 2357999999999999999999999999999999999999888776542 38999999999985 478
Q ss_pred ccceEEEecCC
Q 000711 1318 HSLELRLIDGE 1328 (1338)
Q Consensus 1318 ~d~~l~l~~g~ 1328 (1338)
+|+++.|.+|.
T Consensus 218 ~d~i~~l~~G~ 228 (289)
T PRK13645 218 ADEVIVMHEGK 228 (289)
T ss_pred CCEEEEEECCE
Confidence 99999997664
No 414
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-34 Score=321.97 Aligned_cols=204 Identities=25% Similarity=0.295 Sum_probs=161.5
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcc--------ccCCc
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE--------EAGSG 1171 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~--------~~~lr 1171 (1338)
|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++.. ....+
T Consensus 3 l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 81 (242)
T PRK11124 3 IQLNGINCFYGA-HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRELR 81 (242)
T ss_pred EEEEeeEEEECC-eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHHH
Confidence 789999999964 579999999999999999999999999999999999999999999999998731 12234
Q ss_pred ccEEEEcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC
Q 000711 1172 CGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1338)
Q Consensus 1172 ~~i~~VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 1250 (1338)
.+++|+||+|.+|.+ |++||+.+.... ..+.. .....+.+.++++.+++....++.
T Consensus 82 ~~i~~~~q~~~~~~~~tv~e~i~~~~~~---------~~~~~------~~~~~~~~~~~l~~~gl~~~~~~~-------- 138 (242)
T PRK11124 82 RNVGMVFQQYNLWPHLTVQQNLIEAPCR---------VLGLS------KDQALARAEKLLERLRLKPYADRF-------- 138 (242)
T ss_pred hheEEEecCccccCCCcHHHHHHHHHHH---------HcCCC------HHHHHHHHHHHHHHcCChhhhhCC--------
Confidence 579999999999975 999999631100 00000 000122345566666664433322
Q ss_pred cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEEec
Q 000711 1251 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLID 1326 (1338)
Q Consensus 1251 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l~~ 1326 (1338)
...||||||||++||||++++|+++||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+ .++|+++.|.+
T Consensus 139 --~~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~ 216 (242)
T PRK11124 139 --PLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMEN 216 (242)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 347999999999999999999999999999999999999888776643 489999999999876 57999999977
Q ss_pred CCC
Q 000711 1327 GEG 1329 (1338)
Q Consensus 1327 g~g 1329 (1338)
|+-
T Consensus 217 g~i 219 (242)
T PRK11124 217 GHI 219 (242)
T ss_pred CEE
Confidence 653
No 415
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=3.1e-34 Score=330.52 Aligned_cols=204 Identities=22% Similarity=0.280 Sum_probs=164.1
Q ss_pred CceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc-cCCcccEEE
Q 000711 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFY 1176 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~-~~lr~~i~~ 1176 (1338)
..|+++||++.|++ ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.|+... ...|++|+|
T Consensus 6 ~~i~i~~l~k~~~~-~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ig~ 84 (306)
T PRK13537 6 APIDFRNVEKRYGD-KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRVGV 84 (306)
T ss_pred ceEEEEeEEEEECC-eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcEEE
Confidence 46999999999964 6799999999999999999999999999999999999999999999999998754 234567999
Q ss_pred EcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCC
Q 000711 1177 VPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1338)
Q Consensus 1177 VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 1255 (1338)
|||+|.+|. .|++||+.|... ..+.. .......+.++++.++|... +++.+ .+
T Consensus 85 v~q~~~~~~~~tv~e~l~~~~~----------~~~~~------~~~~~~~~~~~l~~~~l~~~-------~~~~~---~~ 138 (306)
T PRK13537 85 VPQFDNLDPDFTVRENLLVFGR----------YFGLS------AAAARALVPPLLEFAKLENK-------ADAKV---GE 138 (306)
T ss_pred EeccCcCCCCCcHHHHHHHHHH----------HcCCC------HHHHHHHHHHHHHHcCCchH-------hcCch---hh
Confidence 999999986 699999974110 00000 00011234456666666332 23333 36
Q ss_pred CChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1256 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1256 LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
||+|||||++|||||+++|++|+|||||++||+.+...+.+++++ .|+|+|+++|.++.+ +++|+++.|.+|+
T Consensus 139 LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 139 LSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGR 215 (306)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999888776643 489999999999865 6799999997664
No 416
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=3.9e-34 Score=319.25 Aligned_cols=203 Identities=24% Similarity=0.276 Sum_probs=164.7
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcC
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQ 1179 (1338)
|+++|++++|++ +++|+|+||+|.+||.+||+||||||||||+++|.|+++|.+|+|.+||.++......+.+++|+||
T Consensus 1 i~i~~l~~~~~~-~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~~q 79 (237)
T TIGR00968 1 IEIANISKRFGS-FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFVFQ 79 (237)
T ss_pred CEEEEEEEEECC-eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEEec
Confidence 578999999975 4699999999999999999999999999999999999999999999999998765444567999999
Q ss_pred CCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCCh
Q 000711 1180 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1338)
Q Consensus 1180 dP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 1258 (1338)
+|.+|++ |+++|+.+.... .+. .....++.+.++++.+++....++. ..+||+
T Consensus 80 ~~~~~~~~t~~enl~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~lS~ 133 (237)
T TIGR00968 80 HYALFKHLTVRDNIAFGLEI----------RKH------PKAKIKARVEELLELVQLEGLGDRY----------PNQLSG 133 (237)
T ss_pred ChhhccCCcHHHHHHhHHHh----------cCC------CHHHHHHHHHHHHHHcCCHhHhhCC----------hhhCCH
Confidence 9999976 999999653110 000 0000123345666776664433322 246999
Q ss_pred hHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---c-CCeEEEeccCCCC-cccccceEEEecCCC
Q 000711 1259 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---M-GITFVTSSQRPAL-IPFHSLELRLIDGEG 1329 (1338)
Q Consensus 1259 GQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~-~~TvI~IAHRl~~-i~~~d~~l~l~~g~g 1329 (1338)
|||||++||||++++|+++||||||++||.++.+.+.+.+++ . ++|+|+++|+++. .+++|+++.|.+|+-
T Consensus 134 G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i 209 (237)
T TIGR00968 134 GQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKI 209 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEE
Confidence 999999999999999999999999999999999888776643 3 7999999999985 577999999976654
No 417
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=4.5e-34 Score=310.42 Aligned_cols=192 Identities=26% Similarity=0.357 Sum_probs=157.2
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc-cCCcccEEEEc
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVP 1178 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~-~~lr~~i~~Vp 1178 (1338)
++++||++.|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++... ...+.+++|+|
T Consensus 1 l~i~~l~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (201)
T cd03231 1 LEADELTCERDG-RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLLYLG 79 (201)
T ss_pred CEEEEEEEEeCC-ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheEEec
Confidence 478999999864 5799999999999999999999999999999999999999999999999887644 23456799999
Q ss_pred CCCCCC-CCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1179 QRPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1179 QdP~LF-~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
|+|.++ ..|++||+.++.... .+..+.++++.+++....++ . ..+||
T Consensus 80 q~~~~~~~~tv~e~l~~~~~~~----------------------~~~~~~~~l~~~~l~~~~~~-------~---~~~LS 127 (201)
T cd03231 80 HAPGIKTTLSVLENLRFWHADH----------------------SDEQVEEALARVGLNGFEDR-------P---VAQLS 127 (201)
T ss_pred cccccCCCcCHHHHHHhhcccc----------------------cHHHHHHHHHHcCChhhhcC-------c---hhhCC
Confidence 999886 579999997542100 12334556666666432211 1 34699
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCC-CCcccccceEEE
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRP-ALIPFHSLELRL 1324 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl-~~i~~~d~~l~l 1324 (1338)
||||||++||||++++|+++||||||++||..+.+.+.+.+++ .++|+|+|+|+. ....+.++++++
T Consensus 128 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 128 AGQQRRVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 9999999999999999999999999999999999888877643 489999999987 577788888776
No 418
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-34 Score=320.80 Aligned_cols=198 Identities=20% Similarity=0.249 Sum_probs=163.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCCc-------cc
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-------DL 511 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~-------~~ 511 (1338)
.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. .+
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~ 81 (249)
T PRK14253 3 KFNIENLDLFYG-ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADL 81 (249)
T ss_pred eEEEeccEEEEC-CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHH
Confidence 588999999996 46899999999999999999999999999999999999986 599999998541 23
Q ss_pred cccEEEEecCCCCCCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCchHH----hcCCCCccccCCCCCChhHHHH
Q 000711 512 NKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYLL----DRYPPEKEINWGDELSLGEQQR 586 (1338)
Q Consensus 512 ~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~----~~~~~~~~~~~g~~LSgGqkQR 586 (1338)
++.++|+||+|.++..|++||+.++....... ....++++.++++.+++.+.+ ++. ..+||||||||
T Consensus 82 ~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------~~~LS~G~~qr 153 (249)
T PRK14253 82 RIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSH--------AFGLSGGQQQR 153 (249)
T ss_pred HhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcC--------cccCCHHHHHH
Confidence 56799999999988899999998753211100 011234566778888875432 222 36899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 587 lalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
++||||++.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .||++++|+++
T Consensus 154 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G 220 (249)
T PRK14253 154 LCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMG 220 (249)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999998875 3689999999999866 69999999863
No 419
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2.4e-34 Score=314.61 Aligned_cols=196 Identities=21% Similarity=0.222 Sum_probs=156.3
Q ss_pred EeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc------CCcccEE
Q 000711 1102 FSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA------GSGCGIF 1175 (1338)
Q Consensus 1102 f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~------~lr~~i~ 1175 (1338)
++||++.|++ +++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++..+. ..+++++
T Consensus 1 i~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~ 79 (206)
T TIGR03608 1 LKNISKKFGD-KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKLG 79 (206)
T ss_pred CcceEEEECC-EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCee
Confidence 3689998874 57999999999999999999999999999999999999999999999999875431 2345799
Q ss_pred EEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccC
Q 000711 1176 YVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1338)
Q Consensus 1176 ~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 1254 (1338)
|+||+|.+|. .|++||+.++... .+. .....++.+.++++.+++....++ . ..
T Consensus 80 ~~~q~~~~~~~~t~~e~~~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~-------~---~~ 133 (206)
T TIGR03608 80 YLFQNFALIENETVEENLDLGLKY----------KKL------SKKEKREKKKEALEKVGLNLKLKQ-------K---IY 133 (206)
T ss_pred EEecchhhccCCcHHHHHHHHHHh----------cCC------CHHHHHHHHHHHHHHcCchhhhcC-------C---hh
Confidence 9999999997 6999999642100 000 000012345566677666433222 1 34
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCcccccceEEE
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIPFHSLELRL 1324 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i~~~d~~l~l 1324 (1338)
+||+|||||++||||++++|++|||||||++||.++.+.+.+.+++ .+.|+|+|+|+++.+..+|+++.|
T Consensus 134 ~lS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 134 ELSGGEQQRVALARAILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 6999999999999999999999999999999999999988776643 389999999999988888888764
No 420
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-34 Score=326.19 Aligned_cols=198 Identities=21% Similarity=0.222 Sum_probs=163.3
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC-----CCccEEEeCCCCc--------
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS-------- 509 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~-------- 509 (1338)
..++++||++.|++ +++++|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.+.
T Consensus 38 ~~l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~~ 116 (286)
T PRK14275 38 PHVVAKNFSIYYGE-FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDEV 116 (286)
T ss_pred eEEEEeeeEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccchH
Confidence 46899999999964 579999999999999999999999999999999999864 4999999998541
Q ss_pred cccccEEEEecCCCCCCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCch----HHhcCCCCccccCCCCCChhHH
Q 000711 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 584 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGqk 584 (1338)
.+++.++|+||+|.++..|++||+.++....... ....++++.++++.+++.+ ..++. ...||||||
T Consensus 117 ~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--------~~~LSgGq~ 188 (286)
T PRK14275 117 LLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKN--------ALGLSGGQQ 188 (286)
T ss_pred HhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCC--------hhhCCHHHH
Confidence 2356799999999988889999998753211100 0111345667888888742 23332 368999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHcc--CCeEEEEecChhhHh-hcceEEEccC
Q 000711 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 585 QRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
||++|||||+.+|+++||||||++||+.+.+.+.+.+++. ++|+|++||+++.+. .+|++++|++
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~ 256 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYE 256 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999988753 689999999999875 6999999986
No 421
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-34 Score=301.32 Aligned_cols=160 Identities=38% Similarity=0.642 Sum_probs=145.2
Q ss_pred EEEEeEEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------ccccccEEE
Q 000711 445 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1338)
Q Consensus 445 i~~~~v~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 517 (1338)
++++|+++.|++. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 4689999998754 379999999999999999999999999999999999999999999999864 123467999
Q ss_pred EecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000711 518 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1338)
Q Consensus 518 v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1338)
+||+|.++..|+.||+ ||||||||++||||++.+|
T Consensus 81 ~~~~~~~~~~t~~e~l---------------------------------------------LS~G~~~rl~la~al~~~p 115 (171)
T cd03228 81 VPQDPFLFSGTIRENI---------------------------------------------LSGGQRQRIAIARALLRDP 115 (171)
T ss_pred EcCCchhccchHHHHh---------------------------------------------hCHHHHHHHHHHHHHhcCC
Confidence 9999988888888876 9999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHhhcceEEEccC
Q 000711 598 KFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1338)
Q Consensus 598 ~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~~~d~i~~l~~ 649 (1338)
+++||||||++||+.+...+.+.+++ .++|+|++||+++.+..||++++|++
T Consensus 116 ~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~ 169 (171)
T cd03228 116 PILILDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDD 169 (171)
T ss_pred CEEEEECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcC
Confidence 99999999999999999999998865 37899999999999888999999976
No 422
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=6e-34 Score=334.85 Aligned_cols=189 Identities=22% Similarity=0.291 Sum_probs=161.4
Q ss_pred eEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc----------cccccEEEE
Q 000711 449 GVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------DLNKEIFYV 518 (1338)
Q Consensus 449 ~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~----------~~~~~i~~v 518 (1338)
|+++.|++ .. + |+||++++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. ..++.++|+
T Consensus 4 ~l~~~~~~-~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v 80 (354)
T TIGR02142 4 RFSKRLGD-FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYV 80 (354)
T ss_pred EEEEEECC-EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEEE
Confidence 78888853 34 4 99999999999999999999999999999999999999999998541 134679999
Q ss_pred ecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000711 519 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1338)
Q Consensus 519 ~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1338)
||++.++. .|++||+.++..... ....++++.++++.+++.++.++.+ .+||||||||++|||||+.+|
T Consensus 81 ~q~~~l~~~~tv~enl~~~~~~~~--~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LSgGqkqRvalAraL~~~p 150 (354)
T TIGR02142 81 FQEARLFPHLSVRGNLRYGMKRAR--PSERRISFERVIELLGIGHLLGRLP--------GRLSGGEKQRVAIGRALLSSP 150 (354)
T ss_pred ecCCccCCCCcHHHHHHHHhhccC--hhHHHHHHHHHHHHcCChhHhcCCh--------hhCCHHHHHHHHHHHHHHcCC
Confidence 99998886 499999998643211 1112345788999999998888876 689999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 598 KFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 598 ~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
+++||||||++||+.+++.+++.+++ .|+|+|+|||+++.+. .+|++++|+++
T Consensus 151 ~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G 208 (354)
T TIGR02142 151 RLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDG 208 (354)
T ss_pred CEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCC
Confidence 99999999999999999999888764 3899999999999874 69999999863
No 423
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=324.16 Aligned_cols=208 Identities=18% Similarity=0.206 Sum_probs=162.0
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCceEEcCCCCCccc----cC
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP-----VVSGSLTKPSQHIDEE----AG 1169 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~-----~~sG~I~idg~dI~~~----~~ 1169 (1338)
.|+++||+++|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++ |++|+|.+||.++... ..
T Consensus 6 ~l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 84 (253)
T PRK14242 6 KMEARGLSFFYGD-FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVE 84 (253)
T ss_pred EEEEeeeEEEECC-eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHH
Confidence 6999999999964 569999999999999999999999999999999999975 5899999999988642 23
Q ss_pred CcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCccc
Q 000711 1170 SGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 1249 (1338)
Q Consensus 1170 lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 1249 (1338)
.+.+++||||+|.+|.+|+++|+.++... .+.. ..+..++.+.++++.+++...+... ++.
T Consensus 85 ~~~~i~~v~q~~~~~~~tv~enl~~~~~~----------~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~---~~~- 145 (253)
T PRK14242 85 LRRRVGMVFQKPNPFPKSIFENVAYGLRV----------NGVK-----DKAYLAERVERSLRHAALWDEVKDR---LHE- 145 (253)
T ss_pred HhhcEEEEecCCCCCcCcHHHHHHHHHHH----------cCCC-----CHHHHHHHHHHHHHHcCCchhhhHH---hhC-
Confidence 35579999999999999999999653100 0000 0000123344556666653221110 011
Q ss_pred CcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCc-ccccceEEEec
Q 000711 1250 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLID 1326 (1338)
Q Consensus 1250 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i-~~~d~~l~l~~ 1326 (1338)
...+||||||||++||||++++|++|||||||++||.++.+.+.+.+++ .++|||+|+|+++.+ +++|+++.|.+
T Consensus 146 --~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~ 223 (253)
T PRK14242 146 --SALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYM 223 (253)
T ss_pred --CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEEC
Confidence 2357999999999999999999999999999999999999888777654 378999999999866 78999999976
Q ss_pred CC
Q 000711 1327 GE 1328 (1338)
Q Consensus 1327 g~ 1328 (1338)
|+
T Consensus 224 G~ 225 (253)
T PRK14242 224 GK 225 (253)
T ss_pred CE
Confidence 64
No 424
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.8e-34 Score=301.95 Aligned_cols=162 Identities=29% Similarity=0.381 Sum_probs=145.4
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-c-------cccccEE
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-S-------DLNKEIF 516 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-~-------~~~~~i~ 516 (1338)
++++|+++.|++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ . ..++.++
T Consensus 1 i~~~~l~~~~~~-~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 79 (178)
T cd03229 1 LELKNVSKRYGQ-KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRIG 79 (178)
T ss_pred CEEEEEEEEECC-eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcEE
Confidence 468999999864 679999999999999999999999999999999999999999999999854 1 2346799
Q ss_pred EEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000711 517 YVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1338)
Q Consensus 517 ~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1338)
|+||+|.++. .|++||+.+. ||||||||++||||+++
T Consensus 80 ~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~G~~qr~~la~al~~ 117 (178)
T cd03229 80 MVFQDFALFPHLTVLENIALG------------------------------------------LSGGQQQRVALARALAM 117 (178)
T ss_pred EEecCCccCCCCCHHHheeec------------------------------------------CCHHHHHHHHHHHHHHC
Confidence 9999998775 5999988652 99999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHc---c-CCeEEEEecChhhHh-hcceEEEccC
Q 000711 596 KPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 596 ~p~illLDEpts~LD~~~~~~i~~~l~~---~-~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
+|++++|||||++||+.++..+.+.+++ . ++|+|++||+++.+. .+|++++|++
T Consensus 118 ~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 176 (178)
T cd03229 118 DPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRD 176 (178)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeC
Confidence 9999999999999999999999988764 3 789999999999887 7999999975
No 425
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.5e-34 Score=320.74 Aligned_cols=203 Identities=23% Similarity=0.312 Sum_probs=162.7
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc----cCCcccEE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE----AGSGCGIF 1175 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~----~~lr~~i~ 1175 (1338)
|+++|+++.|++ +++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++... ...+++++
T Consensus 2 l~~~~l~~~~~~-~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 80 (240)
T PRK09493 2 IEFKNVSKHFGP-TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAG 80 (240)
T ss_pred EEEEeEEEEECC-eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceE
Confidence 689999999864 5799999999999999999999999999999999999999999999999988753 23355799
Q ss_pred EEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccC
Q 000711 1176 YVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1338)
Q Consensus 1176 ~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 1254 (1338)
|+||+|.+|. .|+++|+.++... ..+.. ....++.+.++++.+++....++. ..
T Consensus 81 ~~~q~~~~~~~~tv~~~l~~~~~~---------~~~~~------~~~~~~~~~~~l~~~gl~~~~~~~----------~~ 135 (240)
T PRK09493 81 MVFQQFYLFPHLTALENVMFGPLR---------VRGAS------KEEAEKQARELLAKVGLAERAHHY----------PS 135 (240)
T ss_pred EEecccccCCCCcHHHHHHhHHHH---------hcCCC------HHHHHHHHHHHHHHcCChHHHhcC----------hh
Confidence 9999999886 5999999753100 00000 000123455666766664433222 34
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
.||+|||||++||||++++|++++|||||++||.++.+.+.+.+++ .++|+|+|+|+++.+ .++|+++.|.+|+
T Consensus 136 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 213 (240)
T PRK09493 136 ELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGR 213 (240)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999888776643 489999999999876 5799999997664
No 426
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-34 Score=323.01 Aligned_cols=204 Identities=20% Similarity=0.234 Sum_probs=165.9
Q ss_pred CCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCCc-------
Q 000711 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS------- 509 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~------- 509 (1338)
.+.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 23 ~~~l~~~nl~~~~~-~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~ 101 (272)
T PRK14236 23 QTALEVRNLNLFYG-DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDV 101 (272)
T ss_pred CcEEEEEEEEEEEC-CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCH
Confidence 45799999999996 46899999999999999999999999999999999999984 899999998641
Q ss_pred -cccccEEEEecCCCCCCCCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHH
Q 000711 510 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRL 587 (1338)
Q Consensus 510 -~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRl 587 (1338)
.+++.++|+||++.++..|++||+.++...... .....++++.++++.+++.+.+.... .....+||||||||+
T Consensus 102 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----~~~~~~LS~Gq~qrv 177 (272)
T PRK14236 102 AELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRL----HENAFGLSGGQQQRL 177 (272)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHh----hCCcccCCHHHHHHH
Confidence 235689999999998888999999875321110 00112345778888888864322110 011368999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 588 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 588 alARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
+||||++++|+++||||||++||+.++..+.+.+++ .+.|+|++||+++.+ ..+|++++|+++
T Consensus 178 ~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G 243 (272)
T PRK14236 178 VIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMG 243 (272)
T ss_pred HHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECC
Confidence 999999999999999999999999999999998865 378999999999986 479999999863
No 427
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-34 Score=326.64 Aligned_cols=204 Identities=19% Similarity=0.223 Sum_probs=166.3
Q ss_pred ceEEeeeEEeCCC-----ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc---cCC
Q 000711 1099 SISFSKLDIITPS-----QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE---AGS 1170 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~-----~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~---~~l 1170 (1338)
-|+++||++.|++ .+++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++.+. ...
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 5899999999974 35799999999999999999999999999999999999999999999999988653 223
Q ss_pred cccEEEEcCCCC--CCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcc
Q 000711 1171 GCGIFYVPQRPY--TCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1338)
Q Consensus 1171 r~~i~~VpQdP~--LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 1248 (1338)
+++++||||+|. +|.-|+.+|+.++... .+. .....++.+.++++.++|....++.
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~gL~~~~~~~------ 141 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPEN----------LGI------PPEEIRERVDESLKKVGMYEYRRHA------ 141 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhh----------cCC------CHHHHHHHHHHHHHHCCCHhHhhCC------
Confidence 567999999994 6767899999764210 000 0001133456677777776554443
Q ss_pred cCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCcccccceEEE
Q 000711 1249 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRL 1324 (1338)
Q Consensus 1249 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i~~~d~~l~l 1324 (1338)
..+||||||||++||||++++|++|||||||++||+.+.+.+.+.+++ .|+|+|+|+|+++.+..+|++++|
T Consensus 142 ----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l 217 (280)
T PRK13633 142 ----PHLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVM 217 (280)
T ss_pred ----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEE
Confidence 247999999999999999999999999999999999999888776543 389999999999988889999999
Q ss_pred ecCC
Q 000711 1325 IDGE 1328 (1338)
Q Consensus 1325 ~~g~ 1328 (1338)
.+|+
T Consensus 218 ~~G~ 221 (280)
T PRK13633 218 DSGK 221 (280)
T ss_pred ECCE
Confidence 7764
No 428
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-34 Score=320.18 Aligned_cols=202 Identities=23% Similarity=0.236 Sum_probs=164.2
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCCc--------c
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS--------D 510 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~--------~ 510 (1338)
.|+++||++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. .
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~ 81 (250)
T PRK14262 3 IIEIENFSAYYG-EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTE 81 (250)
T ss_pred eEEEEeeEEEeC-CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHH
Confidence 589999999986 46899999999999999999999999999999999999984 899999998541 2
Q ss_pred ccccEEEEecCCCCCCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHH
Q 000711 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1338)
Q Consensus 511 ~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1338)
+++.++|+||+|.++..|++||+.++....... ....++++.++++.+++.+.++... .....+||||||||++|
T Consensus 82 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----~~~~~~LS~Gq~qr~~l 157 (250)
T PRK14262 82 YRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSEL----NKPGTRLSGGQQQRLCI 157 (250)
T ss_pred hhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHH----hCChhhcCHHHHHHHHH
Confidence 356799999999988899999998753211000 0112345677888888864321110 01136899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 590 ARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
|||++.+|++++|||||++||+.+...+.+.+++ .++|+|++||+++.+ ..+|++++++++
T Consensus 158 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G 221 (250)
T PRK14262 158 ARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRG 221 (250)
T ss_pred HHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999998865 378999999999965 579999999863
No 429
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=6.1e-34 Score=335.08 Aligned_cols=201 Identities=32% Similarity=0.439 Sum_probs=172.6
Q ss_pred CCcEEEEeEEEEcCC------C----CeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC---
Q 000711 442 ANYIEFSGVKVVTPT------G----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG--- 508 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~------~----~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~--- 508 (1338)
...++++|+++.|.. + ..+++|+||++++||+++|||+||||||||.|+|+|+.+|++|+|.++|.+
T Consensus 278 ~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~ 357 (539)
T COG1123 278 EPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDL 357 (539)
T ss_pred CceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCccccc
Confidence 345889999998863 1 368999999999999999999999999999999999999999999999865
Q ss_pred -----ccccccEEEEecCCCC---CCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCch-HHhcCCCCccccCCCC
Q 000711 509 -----SDLNKEIFYVPQRPYT---AVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY-LLDRYPPEKEINWGDE 578 (1338)
Q Consensus 509 -----~~~~~~i~~v~Q~~~l---~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~g~~ 578 (1338)
...++++-+++|+|+- +..||+++|..|....... .....+++.++++.++|.. +.+++| .+
T Consensus 358 ~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ryP--------~e 429 (539)
T COG1123 358 TGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPEFLDRYP--------HE 429 (539)
T ss_pred ccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHHHHhcCc--------hh
Confidence 1245689999999974 5679999998876432211 1223456888999999987 789998 68
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 579 LSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 579 LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
||||||||+||||||..+|+++++|||||+||+.+...+.+.+++ .|.|+|+||||++.++ .||+|.+|..+
T Consensus 430 lSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G 506 (539)
T COG1123 430 LSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDG 506 (539)
T ss_pred cCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECC
Confidence 999999999999999999999999999999999999999988754 5999999999999986 69999999863
No 430
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-34 Score=320.87 Aligned_cols=199 Identities=22% Similarity=0.252 Sum_probs=162.6
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC--C---CccEEEeCCCCc--------
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP--L---VSGHIAKPGVGS-------- 509 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~--~---~~G~i~~~~~~~-------- 509 (1338)
..++++||++.|++ +++++|+||++++||+++|+||||||||||+++|+|+.+ | ++|+|.++|.+.
T Consensus 4 ~~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 4 KIITSSDVHLFYGK-FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred ceEEEEeEEEEECC-eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 36899999999964 689999999999999999999999999999999999975 4 599999998641
Q ss_pred cccccEEEEecCCCCCCCCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCCch----HHhcCCCCccccCCCCCChhHH
Q 000711 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 584 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGqk 584 (1338)
.+++.++|+||++.++..|+++|+.++...... .....++++.+.++.+++.. ..++. ..+||||||
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--------~~~LS~Gq~ 154 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHES--------ALSLSGGQQ 154 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcC--------cccCCHHHH
Confidence 234679999999998889999999875321110 00111345566777777642 22222 368999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHcc--CCeEEEEecChhhHh-hcceEEEccCC
Q 000711 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 585 QRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
||++||||++.+|+++||||||++||+.+.+.+.+.+++. +.|+|+|||+++.+. .+|++++|+++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G 223 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTG 223 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999988653 689999999999875 79999999863
No 431
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-34 Score=323.94 Aligned_cols=207 Identities=24% Similarity=0.292 Sum_probs=164.5
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEE
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFY 1176 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~ 1176 (1338)
.|+++||++.|++ +++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.++|.++... ..++++++|
T Consensus 11 ~l~i~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 89 (265)
T PRK10575 11 TFALRNVSFRVPG-RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAY 89 (265)
T ss_pred eEEEeeEEEEECC-EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheEE
Confidence 5999999999974 5799999999999999999999999999999999999999999999999988654 233457999
Q ss_pred EcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCC
Q 000711 1177 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1338)
Q Consensus 1177 VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 1255 (1338)
+||+|.++.+ |+++|+.++..... ... + ......++.+.++++.+++....++. ..+
T Consensus 90 v~q~~~~~~~~tv~e~l~~~~~~~~---~~~---~------~~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~ 147 (265)
T PRK10575 90 LPQQLPAAEGMTVRELVAIGRYPWH---GAL---G------RFGAADREKVEEAISLVGLKPLAHRL----------VDS 147 (265)
T ss_pred eccCCCCCCCccHHHHHHhCccccc---ccc---c------CCCHHHHHHHHHHHHHcCCHHHhcCC----------ccc
Confidence 9999887665 99999976421000 000 0 00001133456677777775433332 246
Q ss_pred CChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1256 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1256 LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
||||||||++||||++.+|++|||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+ +++|+++.|.+|+
T Consensus 148 LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~ 225 (265)
T PRK10575 148 LSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGE 225 (265)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 999999999999999999999999999999999999887776542 389999999999876 6899999997654
No 432
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4.5e-34 Score=329.88 Aligned_cols=203 Identities=24% Similarity=0.300 Sum_probs=161.2
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc-cCCcccEEEE
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYV 1177 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~-~~lr~~i~~V 1177 (1338)
.|+++||++.|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++... ...|.+++||
T Consensus 4 ~i~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~v 82 (303)
T TIGR01288 4 AIDLVGVSKSYGD-KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIGVV 82 (303)
T ss_pred EEEEEeEEEEeCC-eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEEEE
Confidence 5899999999964 5699999999999999999999999999999999999999999999999988643 2335679999
Q ss_pred cCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCC
Q 000711 1178 PQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 1256 (1338)
Q Consensus 1178 pQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~L 1256 (1338)
||+|.+|. .|+++|+.+... ..+.. .......+.++++.+++.+.. +.. ...|
T Consensus 83 ~q~~~~~~~~tv~e~l~~~~~----------~~~~~------~~~~~~~~~~ll~~~~l~~~~-------~~~---~~~L 136 (303)
T TIGR01288 83 PQFDNLDPEFTVRENLLVFGR----------YFGMS------TREIEAVIPSLLEFARLESKA-------DVR---VALL 136 (303)
T ss_pred eccccCCcCCcHHHHHHHHHH----------HcCCC------HHHHHHHHHHHHHHCCChhHh-------cCc---hhhC
Confidence 99999885 699999963110 00000 000012234556666664322 222 2469
Q ss_pred ChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1257 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1257 SgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
|||||||++||||++++|++|||||||++||+.+.+.+.+.+++ .|+|+|+++|+++.+ +++|+++.|.+|+
T Consensus 137 SgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 137 SGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGR 212 (303)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999888776643 489999999999865 6799999997653
No 433
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-34 Score=326.15 Aligned_cols=201 Identities=22% Similarity=0.191 Sum_probs=159.5
Q ss_pred EEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc------CCcccE
Q 000711 1101 SFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA------GSGCGI 1174 (1338)
Q Consensus 1101 ~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~------~lr~~i 1174 (1338)
.++||+..|. ..++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.... ..+.++
T Consensus 26 ~~~~~~~~~~-~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i 104 (269)
T cd03294 26 SKEEILKKTG-QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKI 104 (269)
T ss_pred hhhhhhhhcC-CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcE
Confidence 4667777774 456899999999999999999999999999999999999999999999999887542 123579
Q ss_pred EEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCccc
Q 000711 1175 FYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1338)
Q Consensus 1175 ~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 1253 (1338)
+||||+|.+|. .|+++|+.++... .+.. ....++.+.++++.++|.....+. .
T Consensus 105 ~~v~q~~~~~~~~tv~e~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~~~~~----------~ 158 (269)
T cd03294 105 SMVFQSFALLPHRTVLENVAFGLEV----------QGVP------RAEREERAAEALELVGLEGWEHKY----------P 158 (269)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHh----------cCCC------HHHHHHHHHHHHHHcCCHhHhhCC----------c
Confidence 99999999985 6999999753110 0000 000123455667777775444332 2
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
.+||||||||++||||++++|+||||||||++||..+.+.+.+.+++ .|+|+|+++|+++.+ +++|+++.|.+|+
T Consensus 159 ~~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~ 238 (269)
T cd03294 159 DELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGR 238 (269)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 46999999999999999999999999999999999999888876543 389999999999754 7899999997654
No 434
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.2e-34 Score=320.45 Aligned_cols=199 Identities=25% Similarity=0.350 Sum_probs=156.5
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc---CCcccEEE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIFY 1176 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~---~lr~~i~~ 1176 (1338)
|+++||++.|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|.+|+|.+||.++.... ..+.+++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (230)
T TIGR03410 1 LEVSNLNVYYGQ-SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAY 79 (230)
T ss_pred CEEEeEEEEeCC-eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeEE
Confidence 578999999975 57999999999999999999999999999999999999999999999999887652 12457999
Q ss_pred EcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCC-chhhhhhhcccCcccCcccC
Q 000711 1177 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVR-LSYLLEREEVGWDANLNWED 1254 (1338)
Q Consensus 1177 VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~-L~~~i~~~~~Gldt~~~~g~ 1254 (1338)
+||+|.+|.+ |+++|+.++..... .. ..+...++++.++ +.... +. ...
T Consensus 80 ~~q~~~~~~~~tv~~~l~~~~~~~~----------~~---------~~~~~~~~l~~~~~l~~~~-------~~---~~~ 130 (230)
T TIGR03410 80 VPQGREIFPRLTVEENLLTGLAALP----------RR---------SRKIPDEIYELFPVLKEML-------GR---RGG 130 (230)
T ss_pred eccCCcccCCCcHHHHHHHHHHhcC----------cc---------hHHHHHHHHHHHHhHHHHh-------hC---Chh
Confidence 9999999986 99999975321000 00 0011122223222 11111 11 234
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCcc-cccceEEEecCC
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIP-FHSLELRLIDGE 1328 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i~-~~d~~l~l~~g~ 1328 (1338)
.||||||||++||||++++|+++||||||++||..+.+.+.+.+++ .++|+|+|+|+++.+. ++|+++++.+|+
T Consensus 131 ~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~ 209 (230)
T TIGR03410 131 DLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGR 209 (230)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999888776643 3799999999998765 699999997654
No 435
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-34 Score=325.21 Aligned_cols=211 Identities=20% Similarity=0.203 Sum_probs=164.5
Q ss_pred CCceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCceEEcCCCCCccc----
Q 000711 1097 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV-----VSGSLTKPSQHIDEE---- 1167 (1338)
Q Consensus 1097 ~g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~-----~sG~I~idg~dI~~~---- 1167 (1338)
.+.|+++||++.|++ +++|+|+||+|+|||.++|+|+||||||||+++|.|+++| ++|+|.+||.++...
T Consensus 17 ~~~l~~~nl~~~~~~-~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~ 95 (267)
T PRK14235 17 EIKMRARDVSVFYGE-KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDV 95 (267)
T ss_pred CceEEEEeEEEEECC-EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccch
Confidence 468999999999974 5799999999999999999999999999999999999975 899999999988642
Q ss_pred cCCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCc
Q 000711 1168 AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWD 1247 (1338)
Q Consensus 1168 ~~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gld 1247 (1338)
...|.+++||||+|.+|.+|+++|+.++... .+.. . .....++.+.++++.+++...+.. -++
T Consensus 96 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~----------~~~~---~-~~~~~~~~~~~~l~~~~l~~~~~~---~~~ 158 (267)
T PRK14235 96 VELRARVGMVFQKPNPFPKSIYENVAYGPRI----------HGLA---R-SKAELDEIVETSLRKAGLWEEVKD---RLH 158 (267)
T ss_pred HHHhhceEEEecCCCCCCCcHHHHHHHHHHh----------cccc---c-chHHHHHHHHHHHHHcCCchhhhH---Hhh
Confidence 2345679999999999999999999753110 0000 0 000012334556666666332210 011
Q ss_pred ccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCc-ccccceEEE
Q 000711 1248 ANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRL 1324 (1338)
Q Consensus 1248 t~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i-~~~d~~l~l 1324 (1338)
. ....||||||||++||||++++|++|||||||++||..+.+.+.+.+++ .+.|+|+|+|+++.+ .++|+++.|
T Consensus 159 ~---~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l 235 (267)
T PRK14235 159 E---PGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFF 235 (267)
T ss_pred C---CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEE
Confidence 1 2357999999999999999999999999999999999999888777653 378999999999876 678999999
Q ss_pred ecCC
Q 000711 1325 IDGE 1328 (1338)
Q Consensus 1325 ~~g~ 1328 (1338)
.+|+
T Consensus 236 ~~G~ 239 (267)
T PRK14235 236 HLGN 239 (267)
T ss_pred ECCE
Confidence 7654
No 436
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-34 Score=302.79 Aligned_cols=166 Identities=26% Similarity=0.386 Sum_probs=147.1
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc-cCCcccEEEEc
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVP 1178 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~-~~lr~~i~~Vp 1178 (1338)
++++||++.|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++... ...+.+++|+|
T Consensus 1 l~~~~l~~~~~~-~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (173)
T cd03230 1 IEVRNLSKRYGK-KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEPEEVKRRIGYLP 79 (173)
T ss_pred CEEEEEEEEECC-eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccchHhhhccEEEEe
Confidence 478999999875 4699999999999999999999999999999999999999999999999988654 23355799999
Q ss_pred CCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1179 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1179 QdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
|+|.+|.+ |+++|+. ||
T Consensus 80 q~~~~~~~~tv~~~~~--------------------------------------------------------------LS 97 (173)
T cd03230 80 EEPSLYENLTVRENLK--------------------------------------------------------------LS 97 (173)
T ss_pred cCCccccCCcHHHHhh--------------------------------------------------------------cC
Confidence 99999886 8888861 49
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCcc-cccceEEEecCC
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIP-FHSLELRLIDGE 1328 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i~-~~d~~l~l~~g~ 1328 (1338)
||||||++||||++++|++++|||||++||.++.+.+.+.+++ .|.|+|+|+|+.+.+. ++|+++.+.+|+
T Consensus 98 ~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~ 172 (173)
T cd03230 98 GGMKQRLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGR 172 (173)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999999999999999999888776643 3789999999998665 899999997764
No 437
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-34 Score=318.43 Aligned_cols=202 Identities=21% Similarity=0.273 Sum_probs=163.7
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcC
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQ 1179 (1338)
|+++|+++.|++ +++++|+||+|+|||+++|+||||||||||+++|.|+++|.+|+|.+||.++......+..++||||
T Consensus 1 l~~~~l~~~~~~-~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 79 (232)
T cd03300 1 IELENVSKFYGG-FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTVFQ 79 (232)
T ss_pred CEEEeEEEEeCC-eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEEec
Confidence 578999999975 4799999999999999999999999999999999999999999999999988765434567999999
Q ss_pred CCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCCh
Q 000711 1180 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1338)
Q Consensus 1180 dP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 1258 (1338)
+|.+|.+ |+++|+.++... .+. .+...+..+.++++.+++.....+. ...||+
T Consensus 80 ~~~~~~~~t~~~nl~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~lS~ 133 (232)
T cd03300 80 NYALFPHLTVFENIAFGLRL----------KKL------PKAEIKERVAEALDLVQLEGYANRK----------PSQLSG 133 (232)
T ss_pred ccccCCCCcHHHHHHHHHHh----------cCC------CHHHHHHHHHHHHHHcCCchhhcCC----------hhhCCH
Confidence 9999976 999999643110 000 0001123445566666665444332 246999
Q ss_pred hHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1259 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1259 GQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
|||||++||||++++|+++||||||++||..+.+.+.+++++ .++|+|+++|++..+ +.+|+++.|.+|+
T Consensus 134 G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~ 208 (232)
T cd03300 134 GQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGK 208 (232)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999988776643 389999999999864 6789999997764
No 438
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=6.2e-34 Score=323.09 Aligned_cols=198 Identities=28% Similarity=0.427 Sum_probs=164.2
Q ss_pred cEEEEeEEEEcCC--------CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc------
Q 000711 444 YIEFSGVKVVTPT--------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------ 509 (1338)
Q Consensus 444 ~i~~~~v~~~~~~--------~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~------ 509 (1338)
.|+++||++.|++ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 4889999999974 46899999999999999999999999999999999999999999999998641
Q ss_pred ---cccccEEEEecCCC--CC-CCCHHHHhcCCCCCC-cccCCCCHHHHHHHHHHcCCc-hHHhcCCCCccccCCCCCCh
Q 000711 510 ---DLNKEIFYVPQRPY--TA-VGTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSL 581 (1338)
Q Consensus 510 ---~~~~~i~~v~Q~~~--l~-~~tl~eni~~~~~~~-~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSg 581 (1338)
.+++.++|+||++. ++ ..|+.+|+.++.... .........++.++++.+++. +..++.+ ..|||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~--------~~LS~ 154 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKRP--------PQLSG 154 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCC--------ccCCh
Confidence 13567999999983 33 469999986532110 000111234678889999986 4555544 68999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 582 GEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 582 GqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|||||++|||||+++|+++||||||++||+.+++.+.+.+++ .++|+|++||+++.+. .||++++|++
T Consensus 155 Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~ 227 (268)
T PRK10419 155 GQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDN 227 (268)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999998887753 3889999999999886 6999999986
No 439
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-34 Score=320.93 Aligned_cols=202 Identities=21% Similarity=0.220 Sum_probs=163.7
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCCc--------
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-------- 509 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~-------- 509 (1338)
..++++||++.|+ ++++++|+||++++||+++|+|+||||||||+|+|+|+++| ++|+|.++|.+.
T Consensus 6 ~~l~~~~l~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (259)
T PRK14260 6 PAIKVKDLSFYYN-TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININ 84 (259)
T ss_pred ceEEEEEEEEEEC-CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchH
Confidence 4699999999985 46799999999999999999999999999999999999985 489999998641
Q ss_pred cccccEEEEecCCCCCCCCHHHHhcCCCCCCcccC-CCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHH
Q 000711 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVE-PLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1338)
.+++.++|+||++.++..|++||+.++........ ...++.+.++++.+++.+.+.... ......||||||||++
T Consensus 85 ~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~----~~~~~~LS~G~~qrv~ 160 (259)
T PRK14260 85 RLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKL----NKSALGLSGGQQQRLC 160 (259)
T ss_pred hhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHh----cCCcccCCHHHHHHHH
Confidence 23457999999999888999999987532110000 112345678888888854322110 0123689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 589 lARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|||||+++|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .||++++|+.
T Consensus 161 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~ 224 (259)
T PRK14260 161 IARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFST 224 (259)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEec
Confidence 99999999999999999999999999999998865 3689999999999875 7999999973
No 440
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-34 Score=325.62 Aligned_cols=204 Identities=22% Similarity=0.274 Sum_probs=164.4
Q ss_pred ceEEeeeEEeCCC--ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccE
Q 000711 1099 SISFSKLDIITPS--QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGI 1174 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~--~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i 1174 (1338)
-|+++||++.|++ ..++|+|+||+|++||.++|+|+||||||||+++|.|+++|.+|+|.+||.++... ...+.++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 5899999999974 34699999999999999999999999999999999999999999999999988754 2345679
Q ss_pred EEEcCCC--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcc
Q 000711 1175 FYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 1252 (1338)
Q Consensus 1175 ~~VpQdP--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~ 1252 (1338)
+||||+| .++..|+.+||.++.... +. ......+.+.++++.+++..+..+.
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~---------- 137 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQ----------GI------PREEMIKRVDEALLAVNMLDFKTRE---------- 137 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHc----------CC------CHHHHHHHHHHHHHHCCCHhHhhCC----------
Confidence 9999999 467889999997542100 00 0000112345566777775443322
Q ss_pred cCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1253 EDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1253 g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
...||||||||++||||++++|++|||||||++||+.+.+.+.+++++ .|+|+|+|+|+++.+..+|++++|.+|.
T Consensus 138 ~~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~ 217 (277)
T PRK13642 138 PARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGE 217 (277)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCE
Confidence 346999999999999999999999999999999999999888776532 3899999999999888899999997664
No 441
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=320.05 Aligned_cols=200 Identities=21% Similarity=0.227 Sum_probs=163.3
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC-----CCccEEEeCCCCc--------
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS-------- 509 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~-------- 509 (1338)
..|+++||++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 9 ~~l~i~~v~~~~~-~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 9 TVLRTENLNVYYG-SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred eEEEEeeeEEEEC-CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 3699999999985 4589999999999999999999999999999999999986 4899999998541
Q ss_pred cccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHH
Q 000711 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1338)
.++++++|++|++.+++.|+.||+.++...... ....++++.++++.+++.+.+.... .....+||||||||++|
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~l~~~~----~~~~~~LSgGq~qrv~l 162 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGY-KGDMDELVERSLRQAALWDEVKDKL----KQSGLSLSGGQQQRLCI 162 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCc-chHHHHHHHHHHHHhCchhhHHHHh----cCCcccCCHHHHHHHHH
Confidence 235679999999998888999999886432110 1112345667788888754332110 11236899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEcc
Q 000711 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLD 648 (1338)
Q Consensus 590 ARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~ 648 (1338)
||||+++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+ ..||++++|+
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~ 224 (264)
T PRK14243 163 ARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFN 224 (264)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEe
Confidence 9999999999999999999999999999998865 368999999999876 5789999997
No 442
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-33 Score=294.74 Aligned_cols=197 Identities=22% Similarity=0.311 Sum_probs=160.6
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-------cccccEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~ 516 (1338)
.++++||+.+|. ...+|+++||++++||+++|+||||+|||||+|+|+|+.++.+|+|.++|.|- -.+..|+
T Consensus 3 mL~v~~l~~~YG-~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi~ 81 (237)
T COG0410 3 MLEVENLSAGYG-KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGIA 81 (237)
T ss_pred ceeEEeEeeccc-ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCeE
Confidence 589999999994 47899999999999999999999999999999999999999999999999871 1356799
Q ss_pred EEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcC-CchHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000711 517 YVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVD-LEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1338)
Q Consensus 517 ~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~-l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1338)
||||...+|. .||.||+..+...... +......++++.+.+- |.+..++ .+.+|||||||-+||||||+
T Consensus 82 ~VPegR~iF~~LTVeENL~~g~~~~~~-~~~~~~~~e~v~~lFP~Lker~~~--------~aG~LSGGEQQMLAiaRALm 152 (237)
T COG0410 82 YVPEGRRIFPRLTVEENLLLGAYARRD-KEAQERDLEEVYELFPRLKERRNQ--------RAGTLSGGEQQMLAIARALM 152 (237)
T ss_pred eCcccccchhhCcHHHHHhhhhhcccc-cccccccHHHHHHHChhHHHHhcC--------cccCCChHHHHHHHHHHHHh
Confidence 9999988775 5999999987433211 0111112444544442 3333333 35799999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 595 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 595 ~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
.+|++|+|||||.+|-|.-.++|++.+++ .|.||++|-++.... +.+|+.++|+++
T Consensus 153 ~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~G 213 (237)
T COG0410 153 SRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENG 213 (237)
T ss_pred cCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCC
Confidence 99999999999999999999999887754 377999999998865 689999999973
No 443
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.2e-34 Score=334.03 Aligned_cols=190 Identities=22% Similarity=0.181 Sum_probs=155.6
Q ss_pred ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--CC----cccEEEEcCCCCCCC
Q 000711 1112 QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GS----GCGIFYVPQRPYTCL 1185 (1338)
Q Consensus 1112 ~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~--~l----r~~i~~VpQdP~LF~ 1185 (1338)
.+++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.|+...+ .+ |++++||||+|.||+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 456999999999999999999999999999999999999999999999999998752 22 568999999999997
Q ss_pred -CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCChhHHHHH
Q 000711 1186 -GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRL 1264 (1338)
Q Consensus 1186 -GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSgGQrQrl 1264 (1338)
.|+++||.++... .+. .....++.+.++++.++|..+.++. ..+||||||||+
T Consensus 85 ~~TV~eNi~~~~~~----------~~~------~~~~~~~~~~~~l~~vgL~~~~~~~----------p~~LSGGq~QRV 138 (363)
T TIGR01186 85 HMTILQNTSLGPEL----------LGW------PEQERKEKALELLKLVGLEEYEHRY----------PDELSGGMQQRV 138 (363)
T ss_pred CCCHHHHHHHHHHH----------cCC------CHHHHHHHHHHHHHhcCCchhhhCC----------hhhCCHHHHHHH
Confidence 5999999763210 000 0000123456677777775544443 357999999999
Q ss_pred HHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHH----hcCCeEEEeccCCC-CcccccceEEEecC
Q 000711 1265 GMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPA-LIPFHSLELRLIDG 1327 (1338)
Q Consensus 1265 aiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~----~~~~TvI~IAHRl~-~i~~~d~~l~l~~g 1327 (1338)
||||||+++|+|||||||||+||+.+.+.+++.+. +.++|+|.|+|+++ ..+++|+++.|.+|
T Consensus 139 ~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G 206 (363)
T TIGR01186 139 GLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAG 206 (363)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 99999999999999999999999999998887653 24899999999997 57889999999665
No 444
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=319.92 Aligned_cols=202 Identities=21% Similarity=0.252 Sum_probs=163.9
Q ss_pred CCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCCc-------
Q 000711 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS------- 509 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~------- 509 (1338)
...|+++|+++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 18 ~~~l~~~nl~~~~~~-~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 18 HSVFEVEGVKVFYGG-FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred CceEEEeeEEEEeCC-eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 347999999999964 5799999999999999999999999999999999999863 699999998641
Q ss_pred -cccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHH
Q 000711 510 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1338)
Q Consensus 510 -~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1338)
.+++.++|+||++.++..|+.||+.++...... ....++.+.++++.+++...+.... ......||||||||++
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~l~~~~----~~~~~~LSgGq~qrv~ 171 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGY-KGNLDELVEDSLRRAAIWEEVKDKL----KEKGTALSGGQQQRLC 171 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCc-hHHHHHHHHHHHHHcccchhhHHHh----cCCcccCCHHHHHHHH
Confidence 235679999999998888999999875321100 0112345667788888753322110 0113689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHcc--CCeEEEEecChhhH-hhcceEEEccC
Q 000711 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 589 lARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
|||||+.+|+++||||||++||+.+.+.+.+.+++. ++|+|++||+++.+ ..||++++|++
T Consensus 172 LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 235 (274)
T PRK14265 172 IARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNT 235 (274)
T ss_pred HHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEec
Confidence 999999999999999999999999999999988753 78999999999877 57999999973
No 445
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-34 Score=326.68 Aligned_cols=204 Identities=24% Similarity=0.276 Sum_probs=162.0
Q ss_pred ceEEeeeEEeCCCc----cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc------c
Q 000711 1099 SISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------A 1168 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~----~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~------~ 1168 (1338)
.|+++||++.|++. +++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... .
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 37899999999642 5799999999999999999999999999999999999999999999999988542 1
Q ss_pred CCcccEEEEcCCC--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCch-hhhhhhccc
Q 000711 1169 GSGCGIFYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLEREEVG 1245 (1338)
Q Consensus 1169 ~lr~~i~~VpQdP--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~-~~i~~~~~G 1245 (1338)
..+.+++|+||+| .+|..|++|||.++... .+. ..+..+..+.++++.++|. ...++
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~gL~~~~~~~---- 141 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKN----------FGF------SEDEAKEKALKWLKKVGLSEDLISK---- 141 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHH----------cCC------CHHHHHHHHHHHHHHcCCChhHhhC----
Confidence 2345799999998 57888999999653100 000 0000122345566766663 22222
Q ss_pred CcccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccce
Q 000711 1246 WDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLE 1321 (1338)
Q Consensus 1246 ldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~ 1321 (1338)
....||||||||++||||++++|++|||||||++||+.+.+.+.+.+++ .|.|+|+|+|+++.+ .++|++
T Consensus 142 ------~~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 142 ------SPFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred ------CcccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEE
Confidence 1357999999999999999999999999999999999999887776643 489999999999865 689999
Q ss_pred EEEecCC
Q 000711 1322 LRLIDGE 1328 (1338)
Q Consensus 1322 l~l~~g~ 1328 (1338)
+.|.+|+
T Consensus 216 ~~l~~G~ 222 (287)
T PRK13641 216 LVLEHGK 222 (287)
T ss_pred EEEECCE
Confidence 9997764
No 446
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=315.17 Aligned_cols=200 Identities=21% Similarity=0.258 Sum_probs=162.5
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEEEcC
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~VpQ 1179 (1338)
|+++||++.|+.. + .|+||+|++||.+||+||||||||||+++|.|+++|.+|+|.+||.++......+.+++|+||
T Consensus 2 l~~~~l~~~~~~~-~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 78 (232)
T PRK10771 2 LKLTDITWLYHHL-P--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSMLFQ 78 (232)
T ss_pred eEEEEEEEEECCc-c--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEEec
Confidence 6899999999742 2 499999999999999999999999999999999999999999999988765433457999999
Q ss_pred CCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCCh
Q 000711 1180 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1338)
Q Consensus 1180 dP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 1258 (1338)
+|.+|.+ |++||+.++....- ......+..+.++++.+++....++.+ ..|||
T Consensus 79 ~~~~~~~~tv~e~l~~~~~~~~----------------~~~~~~~~~~~~~l~~~~l~~~~~~~~----------~~LS~ 132 (232)
T PRK10771 79 ENNLFSHLTVAQNIGLGLNPGL----------------KLNAAQREKLHAIARQMGIEDLLARLP----------GQLSG 132 (232)
T ss_pred ccccccCCcHHHHHhccccccc----------------CCCHHHHHHHHHHHHHcCcHHHHhCCc----------ccCCH
Confidence 9999986 99999976531000 000012344667777777765444432 46999
Q ss_pred hHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1259 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1259 GQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
|||||++||||++++|+++||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+ .++|+++.|.+|+
T Consensus 133 G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 207 (232)
T PRK10771 133 GQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGR 207 (232)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999887776543 388999999999865 6789999997654
No 447
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.9e-35 Score=294.14 Aligned_cols=197 Identities=22% Similarity=0.274 Sum_probs=168.3
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-------cccccEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~ 516 (1338)
.+..+|+.++|. ++++++++||++++||++++.||||+||||.|.++.|+.+|++|+|.+++.|- .-+..||
T Consensus 4 ~L~a~~l~K~y~-kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlGig 82 (243)
T COG1137 4 TLVAENLAKSYK-KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLGIG 82 (243)
T ss_pred EEEehhhhHhhC-CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcCcc
Confidence 578899999884 67899999999999999999999999999999999999999999999999871 1245699
Q ss_pred EEecCCCCCCC-CHHHHhcCCCCCCcccC--CCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000711 517 YVPQRPYTAVG-TLRDQLIYPLTSDQEVE--PLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1338)
Q Consensus 517 ~v~Q~~~l~~~-tl~eni~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1338)
|+||+|.+|.+ ||+|||..-........ ....+++.+.|+.+++.+..++. +.+||||||.|+.|||||
T Consensus 83 YLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~--------a~sLSGGERRR~EIARaL 154 (243)
T COG1137 83 YLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRDSK--------AYSLSGGERRRVEIARAL 154 (243)
T ss_pred cccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCc--------ccccccchHHHHHHHHHH
Confidence 99999999976 99999986443221111 13345677999999999988875 379999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHH---HHccCCeEEEEecCh-hhHhhcceEEEccC
Q 000711 594 YHKPKFAILDECTSAVTTDMEERFCAK---VRAMGTSCITISHRP-ALVAFHDVVLSLDG 649 (1338)
Q Consensus 594 ~~~p~illLDEpts~LD~~~~~~i~~~---l~~~~~t~i~itH~~-~~~~~~d~i~~l~~ 649 (1338)
..+|++++||||++++||.+...|++. |++.|..|++.-|+. +++.-|||.+++..
T Consensus 155 a~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~ 214 (243)
T COG1137 155 AANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISD 214 (243)
T ss_pred hcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEec
Confidence 999999999999999999988777665 556799999999986 47889999999976
No 448
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=319.26 Aligned_cols=202 Identities=21% Similarity=0.216 Sum_probs=163.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCCc--------c
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS--------D 510 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~--------~ 510 (1338)
.|+++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. .
T Consensus 6 ~i~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 84 (253)
T PRK14261 6 ILSTKNLNLWYG-EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVA 84 (253)
T ss_pred eEEEeeeEEEEC-CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhh
Confidence 689999999996 46899999999999999999999999999999999999763 489999998641 2
Q ss_pred ccccEEEEecCCCCCCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHH
Q 000711 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1338)
Q Consensus 511 ~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1338)
.++.++|+||+|.++..|++||+.++....... ....++++.++++.+++.+.+... .......||||||||++|
T Consensus 85 ~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~----~~~~~~~LS~G~~qrv~l 160 (253)
T PRK14261 85 LRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDR----LHDSALSLSGGQQQRLCI 160 (253)
T ss_pred hhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHH----hhcChhhCCHHHHHHHHH
Confidence 245799999999988889999998763211100 011234567788888875432110 001236899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 590 ARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
|||++.+|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|++++|+++
T Consensus 161 aral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G 224 (253)
T PRK14261 161 ARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLG 224 (253)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECC
Confidence 9999999999999999999999999999888865 3689999999999885 79999999863
No 449
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-34 Score=322.35 Aligned_cols=202 Identities=21% Similarity=0.244 Sum_probs=163.9
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCCc-------c
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-------D 510 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~-------~ 510 (1338)
..++++||++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. .
T Consensus 20 ~~l~i~nl~~~~~-~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 20 PAMAAVNLTLGFA-GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred cEEEEeeEEEEEC-CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 4689999999996 57899999999999999999999999999999999999986 799999998541 2
Q ss_pred ccccEEEEecCCCCCCCCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHH
Q 000711 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1338)
Q Consensus 511 ~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1338)
+++.++|+||+|.+++.|++||+.++...... ......+.+.++++.+++.+..... ......+||||||||++|
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----l~~~~~~LSgGq~qrl~L 174 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDR----LSDSPFRLSGGQQQLLCL 174 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhH----hhCCcccCCHHHHHHHHH
Confidence 35679999999998889999999875321100 0001112345678888886432110 001236899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHcc--CCeEEEEecChhhHh-hcceEEEccC
Q 000711 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 590 ARal~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
||||+++|+++||||||++||+.+.+.+++.+++. ++|+|++||+++.+. .+|++++|++
T Consensus 175 Aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~ 237 (276)
T PRK14271 175 ARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFD 237 (276)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999988653 689999999999864 7999999986
No 450
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-34 Score=330.82 Aligned_cols=198 Identities=19% Similarity=0.278 Sum_probs=162.8
Q ss_pred cEEEEeEEEEcCC---CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC----CCccEEEeCCCCc------c
Q 000711 444 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP----LVSGHIAKPGVGS------D 510 (1338)
Q Consensus 444 ~i~~~~v~~~~~~---~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~----~~~G~i~~~~~~~------~ 510 (1338)
.|+++|+++.|+. ...+++|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|.+. +
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 5899999999863 3479999999999999999999999999999999999986 5899999999641 1
Q ss_pred c----cccEEEEecCCCC---CCCCHHHHhcCCCCC---Ccc---cCCCCHHHHHHHHHHcCCch---HHhcCCCCcccc
Q 000711 511 L----NKEIFYVPQRPYT---AVGTLRDQLIYPLTS---DQE---VEPLTHGGMVELLKNVDLEY---LLDRYPPEKEIN 574 (1338)
Q Consensus 511 ~----~~~i~~v~Q~~~l---~~~tl~eni~~~~~~---~~~---~~~~~~~~~~~~l~~~~l~~---~~~~~~~~~~~~ 574 (1338)
+ ++.|+||||+|.. +..|+.+|+..+... ... ......+++.++++.++|.+ ..++.|
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p------ 156 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFP------ 156 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCc------
Confidence 1 2479999999962 346899998643110 000 00112356788999999974 345666
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 575 WGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 575 ~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
.+||||||||++|||||+.+|++|||||||++||+.+...+.+.+++ .|.|+|+|||+++.+. .+|+|++|++
T Consensus 157 --~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 157 --YELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred --hhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 68999999999999999999999999999999999999999988764 3899999999999985 6999999986
No 451
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-34 Score=322.45 Aligned_cols=217 Identities=21% Similarity=0.249 Sum_probs=164.6
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc---CCcccEE
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIF 1175 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~---~lr~~i~ 1175 (1338)
.|+++||++.|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.++|.++.... ..+.+++
T Consensus 5 ~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (255)
T PRK11300 5 LLSVSGLMMRFGG-LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGVV 83 (255)
T ss_pred eEEEeeEEEEECC-EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCeE
Confidence 5899999999964 57999999999999999999999999999999999999999999999999887642 2344699
Q ss_pred EEcCCCCCCCC-CHHHHhcCCCch--HHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcc
Q 000711 1176 YVPQRPYTCLG-TLRDQIIYPLSR--EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 1252 (1338)
Q Consensus 1176 ~VpQdP~LF~G-TIReNL~~p~~~--~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~ 1252 (1338)
|+||+|.+|.+ |+++|+.++... ..+... ...+. .............+.++++.+++.+..++ .
T Consensus 84 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~l~~~gl~~~~~~----------~ 150 (255)
T PRK11300 84 RTFQHVRLFREMTVIENLLVAQHQQLKTGLFS--GLLKT-PAFRRAESEALDRAATWLERVGLLEHANR----------Q 150 (255)
T ss_pred EeccCcccCCCCcHHHHHHHhhhccccchhhh--hhccc-cccccchhHHHHHHHHHHHhCChhhhhhC----------C
Confidence 99999999986 999999764210 000000 00000 00000000011234556666666433322 2
Q ss_pred cCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEecC
Q 000711 1253 EDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDG 1327 (1338)
Q Consensus 1253 g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~~g 1327 (1338)
..+||||||||++||||++++|++|||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+ +++|+++.|.+|
T Consensus 151 ~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g 230 (255)
T PRK11300 151 AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQG 230 (255)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 357999999999999999999999999999999999999888776542 389999999999865 679999999776
Q ss_pred CC
Q 000711 1328 EG 1329 (1338)
Q Consensus 1328 ~g 1329 (1338)
+-
T Consensus 231 ~i 232 (255)
T PRK11300 231 TP 232 (255)
T ss_pred eE
Confidence 53
No 452
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-34 Score=308.07 Aligned_cols=183 Identities=28% Similarity=0.363 Sum_probs=161.4
Q ss_pred eeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC------cc----ccccEEEEecCCCC-CCCC
Q 000711 460 LVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SD----LNKEIFYVPQRPYT-AVGT 528 (1338)
Q Consensus 460 ~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~----~~~~i~~v~Q~~~l-~~~t 528 (1338)
-++|+||+|+.||+..|+|-||||||||+|++.|+++|++|+|.++|.+ .+ .++++++|+|+.-| |.-|
T Consensus 43 Gv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrt 122 (386)
T COG4175 43 GVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRT 122 (386)
T ss_pred eeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchh
Confidence 4789999999999999999999999999999999999999999999986 11 24689999999865 5569
Q ss_pred HHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCC
Q 000711 529 LRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSA 608 (1338)
Q Consensus 529 l~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~ 608 (1338)
|.||..||..-....+...+++..+.|+.+||+.+.+++| .+||||+|||+.|||||..+|+||++|||+||
T Consensus 123 Vl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp--------~eLSGGMqQRVGLARAla~~~~IlLMDEaFSA 194 (386)
T COG4175 123 VLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYP--------NELSGGMQQRVGLARALANDPDILLMDEAFSA 194 (386)
T ss_pred HhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCc--------ccccchHHHHHHHHHHHccCCCEEEecCchhh
Confidence 9999999986544434445677889999999999999999 69999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHH----ccCCeEEEEecChhh-HhhcceEEEccCC
Q 000711 609 VTTDMEERFCAKVR----AMGTSCITISHRPAL-VAFHDVVLSLDGE 650 (1338)
Q Consensus 609 LD~~~~~~i~~~l~----~~~~t~i~itH~~~~-~~~~d~i~~l~~~ 650 (1338)
|||--+.++++.|. +.++|+|+||||++. ++-.|+|..|+++
T Consensus 195 LDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkdG 241 (386)
T COG4175 195 LDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKDG 241 (386)
T ss_pred cChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecCC
Confidence 99998888887654 359999999999986 5789999999863
No 453
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=6.5e-34 Score=323.34 Aligned_cols=204 Identities=19% Similarity=0.234 Sum_probs=161.8
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc-----CCccc
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCG 1173 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~-----~lr~~ 1173 (1338)
.|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.... ..+.+
T Consensus 7 ~l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~ 85 (269)
T PRK11831 7 LVDMRGVSFTRGN-RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKR 85 (269)
T ss_pred eEEEeCeEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhhc
Confidence 5899999999864 57999999999999999999999999999999999999999999999999886542 13457
Q ss_pred EEEEcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcc
Q 000711 1174 IFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 1252 (1338)
Q Consensus 1174 i~~VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~ 1252 (1338)
++||||+|.+|.+ |+++|+.++..... ... ....++.+.++++.+++....++.
T Consensus 86 i~~v~q~~~~~~~~tv~enl~~~~~~~~---------~~~------~~~~~~~~~~~l~~~gl~~~~~~~---------- 140 (269)
T PRK11831 86 MSMLFQSGALFTDMNVFDNVAYPLREHT---------QLP------APLLHSTVMMKLEAVGLRGAAKLM---------- 140 (269)
T ss_pred EEEEecccccCCCCCHHHHHHHHHHHcc---------CCC------HHHHHHHHHHHHHHcCChhhhhCC----------
Confidence 9999999999986 99999965311000 000 000122344566666664332221
Q ss_pred cCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCc-ccccceEEEecC
Q 000711 1253 EDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDG 1327 (1338)
Q Consensus 1253 g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i-~~~d~~l~l~~g 1327 (1338)
...||||||||++||||++++|++|||||||++||.++.+.+.+.+++ .|+|+|+|+|+++.+ +++|+++.|.+|
T Consensus 141 ~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G 220 (269)
T PRK11831 141 PSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADK 220 (269)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECC
Confidence 246999999999999999999999999999999999999887776543 389999999998754 679999999766
Q ss_pred C
Q 000711 1328 E 1328 (1338)
Q Consensus 1328 ~ 1328 (1338)
+
T Consensus 221 ~ 221 (269)
T PRK11831 221 K 221 (269)
T ss_pred E
Confidence 4
No 454
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-34 Score=318.19 Aligned_cols=204 Identities=19% Similarity=0.311 Sum_probs=162.0
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc---CCcccEE
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIF 1175 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~---~lr~~i~ 1175 (1338)
.|+++||++.|++ +++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++.... ..+.+++
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 81 (241)
T PRK10895 3 TLTAKNLAKAYKG-RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIG 81 (241)
T ss_pred eEEEeCcEEEeCC-EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeE
Confidence 3789999999974 57999999999999999999999999999999999999999999999999886542 2345799
Q ss_pred EEcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccC
Q 000711 1176 YVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1338)
Q Consensus 1176 ~VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 1254 (1338)
||||+|.+|.+ |++||+.++..... +. .+...+..+.++++.+++.....+ ...
T Consensus 82 ~~~q~~~~~~~~tv~enl~~~~~~~~---------~~------~~~~~~~~~~~~l~~~~l~~~~~~----------~~~ 136 (241)
T PRK10895 82 YLPQEASIFRRLSVYDNLMAVLQIRD---------DL------SAEQREDRANELMEEFHIEHLRDS----------MGQ 136 (241)
T ss_pred EeccCCcccccCcHHHHHhhhhhccc---------cc------CHHHHHHHHHHHHHHcCCHHHhhc----------chh
Confidence 99999999875 99999975321000 00 000012334556666666432221 235
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHH---hcCCeEEEeccCCC-CcccccceEEEecCC
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK---DMGITFVTSSQRPA-LIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~---~~~~TvI~IAHRl~-~i~~~d~~l~l~~g~ 1328 (1338)
.||||||||++||||++++|++|||||||++||.++.+.+.+.++ ..|+|+|+++|+++ ..+++|+++.|.+|+
T Consensus 137 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~ 214 (241)
T PRK10895 137 SLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGH 214 (241)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCe
Confidence 799999999999999999999999999999999999987766553 35899999999995 667899999997654
No 455
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.2e-33 Score=305.65 Aligned_cols=186 Identities=20% Similarity=0.252 Sum_probs=158.4
Q ss_pred EEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-cc-cccEEEEecCC
Q 000711 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-DL-NKEIFYVPQRP 522 (1338)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-~~-~~~i~~v~Q~~ 522 (1338)
++++|+++.|++ +.+++ +||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .. ++.++|++|++
T Consensus 2 l~~~~l~~~~~~-~~l~~-vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ 79 (195)
T PRK13541 2 LSLHQLQFNIEQ-KNLFD-LSITFLPSAITYIKGANGCGKSSLLRMIAGIMQPSSGNIYYKNCNINNIAKPYCTYIGHNL 79 (195)
T ss_pred eEEEEeeEEECC-cEEEE-EEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCcccChhhhhhEEeccCCc
Confidence 789999999954 55665 9999999999999999999999999999999999999999999651 11 34589999987
Q ss_pred CC-CCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000711 523 YT-AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAI 601 (1338)
Q Consensus 523 ~l-~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ill 601 (1338)
.+ +..|++||+.++.... ..++++.++++.+++++..++.+ .+||||||||++||||++++|++++
T Consensus 80 ~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~~rl~la~al~~~p~~ll 146 (195)
T PRK13541 80 GLKLEMTVFENLKFWSEIY-----NSAETLYAAIHYFKLHDLLDEKC--------YSLSSGMQKIVAIARLIACQSDLWL 146 (195)
T ss_pred CCCccCCHHHHHHHHHHhc-----ccHHHHHHHHHHcCCHhhhccCh--------hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 54 6689999998753211 13456788889999987776654 6899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHH---ccCCeEEEEecChhhHhhcceEE
Q 000711 602 LDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALVAFHDVVL 645 (1338)
Q Consensus 602 LDEpts~LD~~~~~~i~~~l~---~~~~t~i~itH~~~~~~~~d~i~ 645 (1338)
|||||++||+.+.+.+.+.++ +.++|+|++||+++.++.+|-+.
T Consensus 147 lDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~ 193 (195)
T PRK13541 147 LDEVETNLSKENRDLLNNLIVMKANSGGIVLLSSHLESSIKSAQILQ 193 (195)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCccccchhheec
Confidence 999999999999999998875 35899999999999999888663
No 456
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.5e-33 Score=317.76 Aligned_cols=195 Identities=21% Similarity=0.306 Sum_probs=159.9
Q ss_pred CCceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccccCCcccEEE
Q 000711 1097 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFY 1176 (1338)
Q Consensus 1097 ~g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~~lr~~i~~ 1176 (1338)
.+.|+++||+++ .+++|+|+||+|++||++||+|+||||||||+++|.|+++|.+|+|.++| +++|
T Consensus 37 ~~~l~i~nls~~---~~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-----------~i~y 102 (282)
T cd03291 37 DNNLFFSNLCLV---GAPVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-----------RISF 102 (282)
T ss_pred CCeEEEEEEEEe---cccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-----------EEEE
Confidence 467999999996 35799999999999999999999999999999999999999999999987 3999
Q ss_pred EcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCc-ccCC
Q 000711 1177 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WEDI 1255 (1338)
Q Consensus 1177 VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~-~g~~ 1255 (1338)
+||+|.+|++|+++|+.++....+ ..+.++++.+++...++..+.++++.++ .+.+
T Consensus 103 v~q~~~l~~~tv~enl~~~~~~~~-----------------------~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~ 159 (282)
T cd03291 103 SSQFSWIMPGTIKENIIFGVSYDE-----------------------YRYKSVVKACQLEEDITKFPEKDNTVLGEGGIT 159 (282)
T ss_pred EeCcccccccCHHHHhhcccccCH-----------------------HHHHHHHHHhCCHHHHHhccccccceecCCCCc
Confidence 999999999999999975321111 0112223334444445555666666553 3568
Q ss_pred CChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHH-HHh--cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1256 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRL-AKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1256 LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~-~~~--~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
||+|||||++||||++++|++|||||||++||+++.+.+.+. ++. .+.|+|+|+|+++.+..+|+++.|.+|+
T Consensus 160 LSgGq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~ 235 (282)
T cd03291 160 LSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGS 235 (282)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999998877553 322 4899999999999889999999997765
No 457
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-34 Score=303.37 Aligned_cols=168 Identities=26% Similarity=0.293 Sum_probs=148.2
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc----CCcccEE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA----GSGCGIF 1175 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~----~lr~~i~ 1175 (1338)
|+++|++++|++ +++++|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++.... ..+.+++
T Consensus 1 i~~~~l~~~~~~-~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 79 (178)
T cd03229 1 LELKNVSKRYGQ-KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRIG 79 (178)
T ss_pred CEEEEEEEEECC-eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcEE
Confidence 578999999865 57999999999999999999999999999999999999999999999999886542 3345799
Q ss_pred EEcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccC
Q 000711 1176 YVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1338)
Q Consensus 1176 ~VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 1254 (1338)
|+||+|.+|.+ |+++|+.+.
T Consensus 80 ~~~q~~~~~~~~t~~~~l~~~----------------------------------------------------------- 100 (178)
T cd03229 80 MVFQDFALFPHLTVLENIALG----------------------------------------------------------- 100 (178)
T ss_pred EEecCCccCCCCCHHHheeec-----------------------------------------------------------
Confidence 99999998864 999987410
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---c-CCeEEEeccCCCCcc-cccceEEEecCC
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---M-GITFVTSSQRPALIP-FHSLELRLIDGE 1328 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~-~~TvI~IAHRl~~i~-~~d~~l~l~~g~ 1328 (1338)
||+|||||++||||++++|+++||||||++||.++.+.+.+.+++ . ++|+|+|+|++..+. ++|+++.|.+|+
T Consensus 101 -lS~G~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 101 -LSGGQQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred -CCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 599999999999999999999999999999999999888776543 3 799999999998776 799999997663
No 458
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-34 Score=321.13 Aligned_cols=206 Identities=24% Similarity=0.299 Sum_probs=163.7
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYV 1177 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~V 1177 (1338)
|+++||++.|++ +++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.++|.++... ...++.++|+
T Consensus 3 l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 81 (255)
T PRK11231 3 LRTENLTVGYGT-KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLALL 81 (255)
T ss_pred EEEEeEEEEECC-EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEEe
Confidence 789999999974 5799999999999999999999999999999999999999999999999988654 2334579999
Q ss_pred cCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCC
Q 000711 1178 PQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 1256 (1338)
Q Consensus 1178 pQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~L 1256 (1338)
||+|.+|.+ |+++|+.++...... ..+. .....+..+.++++.+++....+.. ...|
T Consensus 82 ~q~~~~~~~~tv~~~i~~~~~~~~~------~~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~L 139 (255)
T PRK11231 82 PQHHLTPEGITVRELVAYGRSPWLS------LWGR------LSAEDNARVNQAMEQTRINHLADRR----------LTDL 139 (255)
T ss_pred cccCCCCCCccHHHHHHhccchhhh------hccC------CCHHHHHHHHHHHHHcCCHHHHcCC----------cccC
Confidence 999999877 999999764211000 0000 0001123455666666664433221 3579
Q ss_pred ChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1257 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1257 SgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
|||||||++||||++++|++|||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+ +++|+++.|.+|.
T Consensus 140 S~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~ 215 (255)
T PRK11231 140 SGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGH 215 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCe
Confidence 99999999999999999999999999999999999888776643 489999999999865 6899999997665
No 459
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=6e-34 Score=317.37 Aligned_cols=185 Identities=25% Similarity=0.311 Sum_probs=152.8
Q ss_pred CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-----ccccccEEEEe-cCCCCC-CCCH
Q 000711 457 GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP-QRPYTA-VGTL 529 (1338)
Q Consensus 457 ~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v~-Q~~~l~-~~tl 529 (1338)
++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|++ |++.++ ..|+
T Consensus 33 ~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 33 EVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCccccCCCCcH
Confidence 4679999999999999999999999999999999999999999999999864 12356799998 556665 5699
Q ss_pred HHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCC
Q 000711 530 RDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAV 609 (1338)
Q Consensus 530 ~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~L 609 (1338)
+||+.+.............+++.++++.+++.+..++.+ ..||||||||++||||++.+|+++||||||++|
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrl~la~al~~~p~llllDEPt~~L 184 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLDELSELLDLEELLDTPV--------RQLSLGQRMRAEIAAALLHEPEILFLDEPTIGL 184 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhcCCh--------hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCC
Confidence 999976432110000112335667888889887766654 689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHc----cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 610 TTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 610 D~~~~~~i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
|+.+.+.+.+.+++ .++|+|++||+++.+ ..+|++++|++
T Consensus 185 D~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~ 229 (236)
T cd03267 185 DVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDK 229 (236)
T ss_pred CHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeC
Confidence 99999999998764 278999999999986 46999999976
No 460
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-34 Score=318.22 Aligned_cols=199 Identities=20% Similarity=0.245 Sum_probs=159.1
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc---CCcccEE
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIF 1175 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~---~lr~~i~ 1175 (1338)
-|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++.... ..+.+++
T Consensus 5 ~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (237)
T PRK11614 5 MLSFDKVSAHYGK-IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAVA 83 (237)
T ss_pred EEEEEeEEEeeCC-ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCEE
Confidence 4899999999864 57999999999999999999999999999999999999999999999999887653 2355799
Q ss_pred EEcCCCCCCCC-CHHHHhcCCCc--hHHHHHHHHhhhcCCccccccccCchHHHHHHHhhC-CchhhhhhhcccCcccCc
Q 000711 1176 YVPQRPYTCLG-TLRDQIIYPLS--REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGV-RLSYLLEREEVGWDANLN 1251 (1338)
Q Consensus 1176 ~VpQdP~LF~G-TIReNL~~p~~--~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~-~L~~~i~~~~~Gldt~~~ 1251 (1338)
|+||+|.+|.+ |+++|+.++.. ..++ .+..+.++++.+ ++.+.. + .
T Consensus 84 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~--------------------~~~~~~~~l~~~~~l~~~~-------~---~ 133 (237)
T PRK11614 84 IVPEGRRVFSRMTVEENLAMGGFFAERDQ--------------------FQERIKWVYELFPRLHERR-------I---Q 133 (237)
T ss_pred EeccCcccCCCCcHHHHHHHhhhccChhH--------------------HHHHHHHHHHHHHHHHHHH-------h---C
Confidence 99999999985 99999976321 1110 011222333332 121111 1 1
Q ss_pred ccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCC-CcccccceEEEecC
Q 000711 1252 WEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPA-LIPFHSLELRLIDG 1327 (1338)
Q Consensus 1252 ~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~-~i~~~d~~l~l~~g 1327 (1338)
....||||||||++||||++++|+|+||||||++||.++.+.+.+.+++ .|+|+|+++|+++ ..+++|+++.|.+|
T Consensus 134 ~~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G 213 (237)
T PRK11614 134 RAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENG 213 (237)
T ss_pred chhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCC
Confidence 2357999999999999999999999999999999999999888776543 4899999999997 66889999999766
Q ss_pred C
Q 000711 1328 E 1328 (1338)
Q Consensus 1328 ~ 1328 (1338)
+
T Consensus 214 ~ 214 (237)
T PRK11614 214 H 214 (237)
T ss_pred E
Confidence 4
No 461
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-34 Score=320.30 Aligned_cols=209 Identities=23% Similarity=0.224 Sum_probs=163.2
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCceEEcCCCCCccc--cCCc
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV-----VSGSLTKPSQHIDEE--AGSG 1171 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~-----~sG~I~idg~dI~~~--~~lr 1171 (1338)
.|+++||++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++| .+|+|.+||.++... ...+
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 81 (250)
T PRK14247 3 KIEIRDLKVSFGQ-VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELR 81 (250)
T ss_pred eEEEEeeEEEECC-eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHh
Confidence 4899999999965 5699999999999999999999999999999999999974 699999999988754 2345
Q ss_pred ccEEEEcCCCCCC-CCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC
Q 000711 1172 CGIFYVPQRPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1338)
Q Consensus 1172 ~~i~~VpQdP~LF-~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 1250 (1338)
.+++||||+|.+| ..|++||+.++.... +.. ......++.+.++++.+++...++ ..+|..
T Consensus 82 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~----------~~~----~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~~- 143 (250)
T PRK14247 82 RRVQMVFQIPNPIPNLSIFENVALGLKLN----------RLV----KSKKELQERVRWALEKAQLWDEVK---DRLDAP- 143 (250)
T ss_pred ccEEEEeccCccCCCCcHHHHHHHHHHhc----------ccc----CCHHHHHHHHHHHHHHcCCCcchh---hhhcCC-
Confidence 6799999999765 679999997532100 000 000001234556677776633221 112222
Q ss_pred cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCc-ccccceEEEecC
Q 000711 1251 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDG 1327 (1338)
Q Consensus 1251 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i-~~~d~~l~l~~g 1327 (1338)
..+||||||||++||||++++|+++||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+ +++|+++.|.+|
T Consensus 144 --~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G 221 (250)
T PRK14247 144 --AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKG 221 (250)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECC
Confidence 347999999999999999999999999999999999999888777654 479999999999866 689999999766
Q ss_pred C
Q 000711 1328 E 1328 (1338)
Q Consensus 1328 ~ 1328 (1338)
+
T Consensus 222 ~ 222 (250)
T PRK14247 222 Q 222 (250)
T ss_pred e
Confidence 5
No 462
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-34 Score=323.47 Aligned_cols=205 Identities=20% Similarity=0.191 Sum_probs=160.4
Q ss_pred CceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCceEEcCCCCCccc----c
Q 000711 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP-----VVSGSLTKPSQHIDEE----A 1168 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~-----~~sG~I~idg~dI~~~----~ 1168 (1338)
..|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++ |++|+|.++|.++... .
T Consensus 12 ~~l~i~nl~~~~~~-~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~ 90 (269)
T PRK14259 12 IIISLQNVTISYGT-FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPV 90 (269)
T ss_pred ceEEEEeEEEEECC-EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHH
Confidence 46999999999965 569999999999999999999999999999999999997 5899999999987531 2
Q ss_pred CCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcc
Q 000711 1169 GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1338)
Q Consensus 1169 ~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 1248 (1338)
..|.+++||||+|.+|..|++||+.++.... + .....++.+.++++.+++...++. -++.
T Consensus 91 ~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~----------~-------~~~~~~~~~~~~l~~~~l~~~l~~---~~~~ 150 (269)
T PRK14259 91 EVRRRIGMVFQQPNPFPKSIYENIAFGARIN----------G-------YTGDMDELVERSLRKAAVWDECKD---KLNE 150 (269)
T ss_pred HHhhceEEEccCCccchhhHHHHHhhhhhhc----------C-------CcHHHHHHHHHHHHHhCCcchhhh---hhCC
Confidence 2345799999999999999999997542100 0 000012233444555544211110 0111
Q ss_pred cCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCC-CcccccceEEEe
Q 000711 1249 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPA-LIPFHSLELRLI 1325 (1338)
Q Consensus 1249 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~-~i~~~d~~l~l~ 1325 (1338)
....||+|||||++||||++++|++|||||||++||.++.+.+.+++++ .++|+|+|+|+++ ..+++|++++|.
T Consensus 151 ---~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~ 227 (269)
T PRK14259 151 ---SGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFN 227 (269)
T ss_pred ---CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEe
Confidence 2357999999999999999999999999999999999999988877654 3789999999997 457899999997
Q ss_pred c
Q 000711 1326 D 1326 (1338)
Q Consensus 1326 ~ 1326 (1338)
+
T Consensus 228 ~ 228 (269)
T PRK14259 228 A 228 (269)
T ss_pred c
Confidence 6
No 463
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-33 Score=318.48 Aligned_cols=199 Identities=21% Similarity=0.235 Sum_probs=165.0
Q ss_pred CCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCCc-------
Q 000711 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS------- 509 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~------- 509 (1338)
.+.|+++|+++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|+.+| ++|+|.++|.+.
T Consensus 14 ~~~l~~~~l~~~~~~-~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~~~ 92 (265)
T PRK14252 14 QQKSEVNKLNFYYGG-YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSPEV 92 (265)
T ss_pred CceEEEEEEEEEECC-eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccccc
Confidence 467999999999964 5899999999999999999999999999999999999875 799999987531
Q ss_pred ---cccccEEEEecCCCCCCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCch----HHhcCCCCccccCCCCCCh
Q 000711 510 ---DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSL 581 (1338)
Q Consensus 510 ---~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSg 581 (1338)
.+++.++|+||++.++.+|++||+.++....... ....++++.++++.+++.+ ..++. ...|||
T Consensus 93 ~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--------~~~LS~ 164 (265)
T PRK14252 93 DPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVKDRLGDL--------AFNLSG 164 (265)
T ss_pred CHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhHHHhCC--------cccCCH
Confidence 2356799999999998889999998753211000 0112356778888888753 22232 368999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 582 GEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 582 GqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|||||++||||++.+|+++||||||++||+.+.+.+.+.+++ .++|+|+|||+++.+. .||++++|++
T Consensus 165 G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~ 235 (265)
T PRK14252 165 GQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYM 235 (265)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999998865 3689999999999874 7999999986
No 464
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-34 Score=324.01 Aligned_cols=202 Identities=20% Similarity=0.225 Sum_probs=160.3
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc----cCCcccEE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE----AGSGCGIF 1175 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~----~~lr~~i~ 1175 (1338)
|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++... ...|.+++
T Consensus 2 l~~~~l~~~~~~-~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i~ 80 (271)
T PRK13638 2 LATSDLWFRYQD-EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVA 80 (271)
T ss_pred eEEEEEEEEcCC-cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhheE
Confidence 689999999964 5799999999999999999999999999999999999999999999999988521 12345799
Q ss_pred EEcCCCC--CCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCccc
Q 000711 1176 YVPQRPY--TCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1338)
Q Consensus 1176 ~VpQdP~--LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 1253 (1338)
||||+|. +|..|+.+|+.++... .+.. .......+.++++.+++.++.++ ..
T Consensus 81 ~v~q~~~~~~~~~~~~~~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~~~~----------~~ 134 (271)
T PRK13638 81 TVFQDPEQQIFYTDIDSDIAFSLRN----------LGVP------EAEITRRVDEALTLVDAQHFRHQ----------PI 134 (271)
T ss_pred EEeeChhhccccccHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHcCCHhHhcC----------Cc
Confidence 9999986 5778899998653100 0000 00011234456666666433222 13
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
..||||||||++||||++++|++|||||||++||.++.+.+.+.+++ .|+|+|+|+|+++.+ +++|+++.|.+|+
T Consensus 135 ~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~ 213 (271)
T PRK13638 135 QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQ 213 (271)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 47999999999999999999999999999999999999888776543 489999999999866 6799999997664
No 465
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-34 Score=324.42 Aligned_cols=204 Identities=22% Similarity=0.309 Sum_probs=163.0
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc----cCCcccEE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE----AGSGCGIF 1175 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~----~~lr~~i~ 1175 (1338)
|+++||+++|++.+++|+|+||+|++||.+||+||||||||||+++|.|+++|.+|+|.++|.++... ...+.+|+
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 81 (275)
T PRK13639 2 LETRDLKYSYPDGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTVG 81 (275)
T ss_pred EEEEEEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhheE
Confidence 68999999997656799999999999999999999999999999999999999999999999988522 12355799
Q ss_pred EEcCCC--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCccc
Q 000711 1176 YVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1338)
Q Consensus 1176 ~VpQdP--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 1253 (1338)
||||+| .+|..|++||+.++... .+.. .....+.+.++++.++|..+.++. .
T Consensus 82 ~v~q~~~~~~~~~tv~e~i~~~~~~----------~~~~------~~~~~~~~~~~l~~~~L~~~~~~~----------~ 135 (275)
T PRK13639 82 IVFQNPDDQLFAPTVEEDVAFGPLN----------LGLS------KEEVEKRVKEALKAVGMEGFENKP----------P 135 (275)
T ss_pred EEeeChhhhhccccHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHCCCchhhcCC----------h
Confidence 999998 57889999999753100 0000 000122345666777764332221 3
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEEecCCC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGEG 1329 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l~~g~g 1329 (1338)
..||||||||++||||++++|+++||||||++||..+...+.+.+++ .++|+|+|+|+++.+ +++|+++.|.+|+-
T Consensus 136 ~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i 215 (275)
T PRK13639 136 HHLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKI 215 (275)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEE
Confidence 47999999999999999999999999999999999999888776543 489999999999865 58999999977653
No 466
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=5.4e-34 Score=316.11 Aligned_cols=202 Identities=19% Similarity=0.264 Sum_probs=159.3
Q ss_pred eEEeeeEEeCCCc---cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCC---CCCceEEcCCCCCccccCCccc
Q 000711 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP---VVSGSLTKPSQHIDEEAGSGCG 1173 (1338)
Q Consensus 1100 I~f~nV~f~yp~~---~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~---~~sG~I~idg~dI~~~~~lr~~ 1173 (1338)
++|+||+++||+. +++|+|+||+|++||.++|+||||||||||+++|.|+++ |++|+|.++|.++... ..+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~-~~~~~ 82 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPD-QFQKC 82 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChH-Hhccc
Confidence 5799999999875 789999999999999999999999999999999999999 9999999999988643 34557
Q ss_pred EEEEcCCCCCCCC-CHHHHhcCCCchH--HHHHHHHhhhcCCccccccccCchHHHHH-HHhhCCchhhhhhhcccCccc
Q 000711 1174 IFYVPQRPYTCLG-TLRDQIIYPLSRE--EAELRALKLHGKGEKLVDTTNILDSYLKT-ILEGVRLSYLLEREEVGWDAN 1249 (1338)
Q Consensus 1174 i~~VpQdP~LF~G-TIReNL~~p~~~~--~~~~~a~~~a~~~~~~~~~~~~~d~~i~~-~l~~~~L~~~i~~~~~Gldt~ 1249 (1338)
++|+||+|.+|.+ |++||+.++.... ....++ ..+..+.+ .++.+++....++
T Consensus 83 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~~~l~~~~~~-------- 139 (226)
T cd03234 83 VAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDA---------------IRKKRVEDVLLRDLALTRIGGN-------- 139 (226)
T ss_pred EEEeCCCCccCcCCcHHHHHHHHHHhhcccccchH---------------HHHHHHHHHHHHhhcchhhhcc--------
Confidence 9999999999987 9999997531100 000000 00111222 4444444322211
Q ss_pred CcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCC--CCcccccceEEE
Q 000711 1250 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRP--ALIPFHSLELRL 1324 (1338)
Q Consensus 1250 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl--~~i~~~d~~l~l 1324 (1338)
....||+|||||++||||++++|+++||||||++||..+...+.+.+++ .+.|+|+++|++ ...+++|+++.|
T Consensus 140 --~~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l 217 (226)
T cd03234 140 --LVKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLL 217 (226)
T ss_pred --cccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEE
Confidence 2357999999999999999999999999999999999999888776643 488999999998 467899999999
Q ss_pred ecC
Q 000711 1325 IDG 1327 (1338)
Q Consensus 1325 ~~g 1327 (1338)
.+|
T Consensus 218 ~~G 220 (226)
T cd03234 218 SSG 220 (226)
T ss_pred eCC
Confidence 765
No 467
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=6.2e-34 Score=330.17 Aligned_cols=207 Identities=23% Similarity=0.305 Sum_probs=162.3
Q ss_pred CceEEeeeEEeCCC------------ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCc
Q 000711 1098 DSISFSKLDIITPS------------QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHID 1165 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~------------~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~ 1165 (1338)
.-++++|++++|+. ..++++|+||+|++||.+||||+||||||||+++|+|+++|++|+|.+||.++.
T Consensus 7 ~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~ 86 (331)
T PRK15079 7 VLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLL 86 (331)
T ss_pred ceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECC
Confidence 35899999998863 246999999999999999999999999999999999999999999999999987
Q ss_pred ccc-----CCcccEEEEcCCC--CCC-CCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchh
Q 000711 1166 EEA-----GSGCGIFYVPQRP--YTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY 1237 (1338)
Q Consensus 1166 ~~~-----~lr~~i~~VpQdP--~LF-~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~ 1237 (1338)
... ..|.+|+||||+| .|| ..|+++||.++... ... . . ..+..++.+.++++.++|..
T Consensus 87 ~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~----------~~~-~-~--~~~~~~~~~~~~l~~vgl~~ 152 (331)
T PRK15079 87 GMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRT----------YHP-K-L--SRQEVKDRVKAMMLKVGLLP 152 (331)
T ss_pred cCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHH----------hcc-C-C--CHHHHHHHHHHHHHHcCCCh
Confidence 652 2345799999999 477 47999998643110 000 0 0 00001233456677777631
Q ss_pred -hhhhhcccCcccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCC
Q 000711 1238 -LLEREEVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRP 1312 (1338)
Q Consensus 1238 -~i~~~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl 1312 (1338)
..++ ...+||||||||++|||||+++|++||+|||||+||..+...+.+++++ .+.|+|+|+|++
T Consensus 153 ~~~~~----------~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl 222 (331)
T PRK15079 153 NLINR----------YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDL 222 (331)
T ss_pred HHhcC----------CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 2222 2357999999999999999999999999999999999999887766532 489999999999
Q ss_pred CCcc-cccceEEEecCC
Q 000711 1313 ALIP-FHSLELRLIDGE 1328 (1338)
Q Consensus 1313 ~~i~-~~d~~l~l~~g~ 1328 (1338)
+.+. ++|++++|.+|+
T Consensus 223 ~~~~~~~dri~vl~~G~ 239 (331)
T PRK15079 223 AVVKHISDRVLVMYLGH 239 (331)
T ss_pred HHHHHhCCEEEEEECCE
Confidence 8774 799999997653
No 468
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=8e-34 Score=315.09 Aligned_cols=182 Identities=21% Similarity=0.289 Sum_probs=151.9
Q ss_pred eeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-ccccccEEEEecCCCCCC-CCHHHHhcCCCC
Q 000711 461 VENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQRPYTAV-GTLRDQLIYPLT 538 (1338)
Q Consensus 461 l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-~~~~~~i~~v~Q~~~l~~-~tl~eni~~~~~ 538 (1338)
++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ .......+|+||++.++. .|++||+.++..
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~~l~~~~tv~e~l~~~~~ 80 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGPDRMVVFQNYSLLPWLTVRENIALAVD 80 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhheEEecCcccCCCCCHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999864 122234689999998876 699999987521
Q ss_pred C--CcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHH
Q 000711 539 S--DQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEER 616 (1338)
Q Consensus 539 ~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~ 616 (1338)
. .........+++.++++.+++.+..++.+ .+||||||||++|||||+++|+++||||||++||+.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~ 152 (230)
T TIGR01184 81 RVLPDLSKSERRAIVEEHIALVGLTEAADKRP--------GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTRGN 152 (230)
T ss_pred hcccCCCHHHHHHHHHHHHHHcCCHHHHcCCh--------hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHH
Confidence 0 00000112345778899999988777755 6899999999999999999999999999999999999999
Q ss_pred HHHHHHc----cCCeEEEEecChhhH-hhcceEEEccCC
Q 000711 617 FCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 650 (1338)
Q Consensus 617 i~~~l~~----~~~t~i~itH~~~~~-~~~d~i~~l~~~ 650 (1338)
+.+.+++ .|+|+|++||+++.+ ..+|++++|+++
T Consensus 153 l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G 191 (230)
T TIGR01184 153 LQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNG 191 (230)
T ss_pred HHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCC
Confidence 9988764 388999999999976 479999999863
No 469
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.9e-33 Score=317.18 Aligned_cols=195 Identities=24% Similarity=0.314 Sum_probs=161.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC----CccEEEeCCCCc---c-ccccE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL----VSGHIAKPGVGS---D-LNKEI 515 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~----~~G~i~~~~~~~---~-~~~~i 515 (1338)
.++++||++.| ++++|+|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|.+. . .++.+
T Consensus 4 ~l~~~~l~~~~--~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i 81 (254)
T PRK10418 4 QIELRNIALQA--AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKI 81 (254)
T ss_pred EEEEeCeEEEe--ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceE
Confidence 58999999998 46899999999999999999999999999999999999999 999999998651 1 23579
Q ss_pred EEEecCCC-CC--CCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCch---HHhcCCCCccccCCCCCChhHHHHHHH
Q 000711 516 FYVPQRPY-TA--VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY---LLDRYPPEKEINWGDELSLGEQQRLGM 589 (1338)
Q Consensus 516 ~~v~Q~~~-l~--~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1338)
+|+||+|. .+ ..|+.+|+.+...... ....++++.++++.+++.+ ..++.+ .+||||||||++|
T Consensus 82 ~~v~q~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~LS~Gq~qrv~l 151 (254)
T PRK10418 82 ATIMQNPRSAFNPLHTMHTHARETCLALG--KPADDATLTAALEAVGLENAARVLKLYP--------FEMSGGMLQRMMI 151 (254)
T ss_pred EEEecCCccccCccccHHHHHHHHHHHcC--CChHHHHHHHHHHHcCCCChhhhhhcCC--------cccCHHHHHHHHH
Confidence 99999984 23 3588888754211100 0123467888999999976 344433 6899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 590 ARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
||||+.+|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .+|++++|+++
T Consensus 152 aral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G 217 (254)
T PRK10418 152 ALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHG 217 (254)
T ss_pred HHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999888764 3799999999999874 79999999863
No 470
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-34 Score=324.34 Aligned_cols=205 Identities=22% Similarity=0.309 Sum_probs=166.6
Q ss_pred CceEEeeeEEeCCC-ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCC---ceEEcCCCCCcccc--CCc
Q 000711 1098 DSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVS---GSLTKPSQHIDEEA--GSG 1171 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~-~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~s---G~I~idg~dI~~~~--~lr 1171 (1338)
+.|+++|+++.|++ ..++|+|+||+|++||.+||+||||||||||+++|.|+++|++ |+|.++|.++.... ..+
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 46999999999975 4579999999999999999999999999999999999999987 89999999887542 234
Q ss_pred ccEEEEcCCC--CCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCccc
Q 000711 1172 CGIFYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 1249 (1338)
Q Consensus 1172 ~~i~~VpQdP--~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 1249 (1338)
.+++||||+| .++..|++|||.++... .+. .....++.+.++++.++|....++.
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~----------~~~------~~~~~~~~~~~~l~~~~L~~~~~~~------- 140 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLEN----------RAV------PRPEMIKIVRDVLADVGMLDYIDSE------- 140 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHh----------CCC------CHHHHHHHHHHHHHHCCChhHhcCC-------
Confidence 5799999999 46688999999753110 000 0000123455677777775544333
Q ss_pred CcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCcccccceEEEe
Q 000711 1250 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLI 1325 (1338)
Q Consensus 1250 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i~~~d~~l~l~ 1325 (1338)
..+||||||||++||||++++|++|||||||++||..+.+.+.+.+++ .|+|||+|+|+++.+..+|++++|.
T Consensus 141 ---~~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~ 217 (282)
T PRK13640 141 ---PANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLD 217 (282)
T ss_pred ---cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEE
Confidence 257999999999999999999999999999999999999887776543 3899999999999888999999997
Q ss_pred cCC
Q 000711 1326 DGE 1328 (1338)
Q Consensus 1326 ~g~ 1328 (1338)
+|.
T Consensus 218 ~G~ 220 (282)
T PRK13640 218 DGK 220 (282)
T ss_pred CCE
Confidence 765
No 471
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=9.8e-34 Score=308.71 Aligned_cols=195 Identities=24% Similarity=0.307 Sum_probs=158.1
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc-cCCcccEEEEc
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVP 1178 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~-~~lr~~i~~Vp 1178 (1338)
|+++|+++.|++ +++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++... ...+++++++|
T Consensus 2 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~~~~ 80 (204)
T PRK13538 2 LEARNLACERDE-RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLLYLG 80 (204)
T ss_pred eEEEEEEEEECC-EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheEEeC
Confidence 689999998865 5699999999999999999999999999999999999999999999999988654 23345799999
Q ss_pred CCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1179 QRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1179 QdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
|+|.++. .|++||+.++... .+ ...++.+.++++.+++....++. ...||
T Consensus 81 ~~~~~~~~~tv~e~l~~~~~~----------~~---------~~~~~~~~~~l~~~gl~~~~~~~----------~~~LS 131 (204)
T PRK13538 81 HQPGIKTELTALENLRFYQRL----------HG---------PGDDEALWEALAQVGLAGFEDVP----------VRQLS 131 (204)
T ss_pred CccccCcCCcHHHHHHHHHHh----------cC---------ccHHHHHHHHHHHcCCHHHhhCC----------hhhcC
Confidence 9998876 6999999653210 00 01134456677777775433221 34699
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEE
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRL 1324 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l 1324 (1338)
||||||++||||++++|+++||||||++||+++.+.+.+++++ .+.|+|+|+|+++.+ .+.++++.+
T Consensus 132 ~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 132 AGQQRRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 9999999999999999999999999999999999988877653 489999999999877 555555555
No 472
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-34 Score=320.90 Aligned_cols=208 Identities=23% Similarity=0.258 Sum_probs=162.6
Q ss_pred CceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCceEEcCCCCCccc----c
Q 000711 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV-----VSGSLTKPSQHIDEE----A 1168 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~-----~sG~I~idg~dI~~~----~ 1168 (1338)
..|+++||++.|++ +++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... .
T Consensus 11 ~~l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 11 PQIKVENLNLWYGE-KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred eeEEEeeeEEEeCC-eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 46999999999964 5699999999999999999999999999999999999985 799999999988542 1
Q ss_pred CCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcc
Q 000711 1169 GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1338)
Q Consensus 1169 ~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 1248 (1338)
..+.+++||||+|.+|..|+++|+.++.. ..+.. .+..+..+.++++.+++...+. ..+++
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~----------~~~~~------~~~~~~~~~~~l~~~~l~~~~~---~~~~~ 150 (258)
T PRK14268 90 ELRKNVGMVFQKPNPFPMSIYDNVAYGPR----------IHGAN------KKDLDGVVENALRSAALWDETS---DRLKS 150 (258)
T ss_pred HHhhhEEEEecCCccCcccHHHHHHHHHH----------HcCCC------HHHHHHHHHHHHHHcCCCcchh---hhhcC
Confidence 23557999999999999999999964310 00000 0001223455666665532110 11222
Q ss_pred cCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCc-ccccceEEEe
Q 000711 1249 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLI 1325 (1338)
Q Consensus 1249 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i-~~~d~~l~l~ 1325 (1338)
. ...||||||||++||||++++|+++||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+ +++|++++|.
T Consensus 151 ~---~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~ 227 (258)
T PRK14268 151 P---ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFL 227 (258)
T ss_pred C---hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEE
Confidence 2 357999999999999999999999999999999999999988877654 379999999999865 7799999997
Q ss_pred cCC
Q 000711 1326 DGE 1328 (1338)
Q Consensus 1326 ~g~ 1328 (1338)
+|+
T Consensus 228 ~G~ 230 (258)
T PRK14268 228 MGE 230 (258)
T ss_pred CCE
Confidence 664
No 473
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=318.89 Aligned_cols=202 Identities=20% Similarity=0.241 Sum_probs=164.5
Q ss_pred CcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCC-----ccEEEeCCCCc--------
Q 000711 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV-----SGHIAKPGVGS-------- 509 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~-----~G~i~~~~~~~-------- 509 (1338)
+.++++||++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.+.
T Consensus 6 ~~l~~~nl~~~~~~-~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~ 84 (261)
T PRK14258 6 PAIKVNNLSFYYDT-QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLN 84 (261)
T ss_pred ceEEEeeEEEEeCC-eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchH
Confidence 46999999999953 57999999999999999999999999999999999999985 89999988541
Q ss_pred cccccEEEEecCCCCCCCCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHH
Q 000711 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1338)
.+++.++|+||++.++..|++||+.++...... .....++++.++++.+++.+.+.... .....+||||||||++
T Consensus 85 ~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----~~~~~~LSgGq~qrv~ 160 (261)
T PRK14258 85 RLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKI----HKSALDLSGGQQQRLC 160 (261)
T ss_pred HhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHh----cCCcccCCHHHHHHHH
Confidence 235679999999988889999999864211100 00011345678888998865332110 0113689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 589 lARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
||||++++|+++||||||++||+.+...+++.+++ .++|+|+|||+++.+. .||++++|++
T Consensus 161 laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~ 226 (261)
T PRK14258 161 IARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKG 226 (261)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEcc
Confidence 99999999999999999999999999999988764 3899999999999875 7999999986
No 474
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=9.1e-34 Score=321.59 Aligned_cols=205 Identities=20% Similarity=0.248 Sum_probs=160.7
Q ss_pred ceEEeeeEEeCCC--------ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--
Q 000711 1099 SISFSKLDIITPS--------QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-- 1168 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~--------~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~-- 1168 (1338)
-|+++||++.|++ .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 3789999999863 367999999999999999999999999999999999999999999999999887652
Q ss_pred ---CCcccEEEEcCCCC--CC-CCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCch-hhhhh
Q 000711 1169 ---GSGCGIFYVPQRPY--TC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLER 1241 (1338)
Q Consensus 1169 ---~lr~~i~~VpQdP~--LF-~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~-~~i~~ 1241 (1338)
..+.+|+||||+|. ++ ..|+++||.++.... .+. .....+..+.++++.+++. ...+.
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~---------~~~------~~~~~~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHL---------TSL------DESEQKARIAELLDMVGLRSEDADK 146 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHh---------cCC------CHHHHHHHHHHHHHHcCCChhhhhC
Confidence 13457999999983 44 479999986431100 000 0001123455666766663 22111
Q ss_pred hcccCcccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCcc-
Q 000711 1242 EEVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIP- 1316 (1338)
Q Consensus 1242 ~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i~- 1316 (1338)
....||||||||++||||++++|++|||||||++||.++.+.+.+.+++ .|+|+|+|+|+++.+.
T Consensus 147 ----------~~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~ 216 (265)
T TIGR02769 147 ----------LPRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQS 216 (265)
T ss_pred ----------ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHH
Confidence 2357999999999999999999999999999999999998877766543 3899999999998774
Q ss_pred cccceEEEecCC
Q 000711 1317 FHSLELRLIDGE 1328 (1338)
Q Consensus 1317 ~~d~~l~l~~g~ 1328 (1338)
++|+++.|.+|+
T Consensus 217 ~~d~i~~l~~G~ 228 (265)
T TIGR02769 217 FCQRVAVMDKGQ 228 (265)
T ss_pred HhcEEEEEeCCE
Confidence 799999997654
No 475
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=316.53 Aligned_cols=199 Identities=21% Similarity=0.191 Sum_probs=165.5
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCC-----CccEEEeCCCCc--------c
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS--------D 510 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~--------~ 510 (1338)
.+.+++++++|. +.++++|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. .
T Consensus 8 ~~~~~~~~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~ 86 (261)
T PRK14263 8 VMDCKLDKIFYG-NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVV 86 (261)
T ss_pred eEEEEeEEEEeC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHh
Confidence 578999999884 46899999999999999999999999999999999999986 799999998641 2
Q ss_pred ccccEEEEecCCCCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000711 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1338)
Q Consensus 511 ~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1338)
+++.++|+||+++++..|+.||+.++...... .....+++.++++.+++.+.+.... .....+||||||||++||
T Consensus 87 ~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~i~~~~----~~~~~~LS~G~~qrv~la 161 (261)
T PRK14263 87 VRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRY-KGDLGDRVKHALQGAALWDEVKDKL----KVSGLSLSGGQQQRLCIA 161 (261)
T ss_pred hhhceEEEecCCccccccHHHHHHHHHhhcCc-hHHHHHHHHHHHHHcCCchhhhhhh----hCCcccCCHHHHHHHHHH
Confidence 34679999999999989999999876422110 1112356788999999865443211 012368999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEcc
Q 000711 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLD 648 (1338)
Q Consensus 591 Ral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~ 648 (1338)
|||+++|+++||||||++||+.+...+++.+++ .++|+|++||+++.+ ..+|++++|+
T Consensus 162 ral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~ 222 (261)
T PRK14263 162 RAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFS 222 (261)
T ss_pred HHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEe
Confidence 999999999999999999999999999998875 378999999999976 5799999996
No 476
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=321.19 Aligned_cols=204 Identities=22% Similarity=0.270 Sum_probs=162.9
Q ss_pred ceEEeeeEEeCCCc-cccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--CCcccEE
Q 000711 1099 SISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIF 1175 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~-~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~--~lr~~i~ 1175 (1338)
.|+++||++.|++. +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..+++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 58999999999764 56999999999999999999999999999999999999999999999999886542 3355799
Q ss_pred EEcCCCC--CCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCccc
Q 000711 1176 YVPQRPY--TCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1338)
Q Consensus 1176 ~VpQdP~--LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 1253 (1338)
||||+|. ++..|+++|+.++.... +. ..+..++.+.++++.+++....+. ..
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~----------~~ 140 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENH----------AV------PYDEMHRRVSEALKQVDMLERADY----------EP 140 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhc----------CC------CHHHHHHHHHHHHHHcCCchhhhC----------Cc
Confidence 9999994 44568999987542100 00 000012334556666666433322 23
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCCcccccceEEEecCC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~i~~~d~~l~l~~g~ 1328 (1338)
.+||+|||||++||||++++|+++||||||++||..+.+.+.+.+++ .|+|+|+|+|+++.+..+|+++.|.+|+
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~ 219 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGT 219 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCE
Confidence 57999999999999999999999999999999999999888776543 3899999999998777899999997653
No 477
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-33 Score=303.88 Aligned_cols=172 Identities=25% Similarity=0.409 Sum_probs=149.4
Q ss_pred cEEEEeEEEEcCC---CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCC--CCCccEEEeCCCC--ccccccEE
Q 000711 444 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW--PLVSGHIAKPGVG--SDLNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~---~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~--~~~~G~i~~~~~~--~~~~~~i~ 516 (1338)
.++++|+++.|++ ++++++|+||++++||+++|+||||||||||+++|+|+. +|++|+|.++|.+ ...++.++
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~~~~~~~i~ 82 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLDKNFQRSTG 82 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehHHHhhhceE
Confidence 4889999999975 267999999999999999999999999999999999986 4899999999865 23456799
Q ss_pred EEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000711 517 YVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1338)
Q Consensus 517 ~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1338)
|++|++.++. .|++||+.++. .++ +||||||||++||||++.
T Consensus 83 ~~~q~~~~~~~~tv~~~l~~~~----------------~~~---------------------~LSgGe~qrv~la~al~~ 125 (192)
T cd03232 83 YVEQQDVHSPNLTVREALRFSA----------------LLR---------------------GLSVEQRKRLTIGVELAA 125 (192)
T ss_pred EecccCccccCCcHHHHHHHHH----------------HHh---------------------cCCHHHhHHHHHHHHHhc
Confidence 9999998776 59999997631 000 599999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhh--HhhcceEEEccCCCc
Q 000711 596 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPAL--VAFHDVVLSLDGEGE 652 (1338)
Q Consensus 596 ~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~--~~~~d~i~~l~~~g~ 652 (1338)
+|++++|||||++||+.+.+.+.+.+++ .|+|+|++||+++. ...+|++++|+++|.
T Consensus 126 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~ 187 (192)
T cd03232 126 KPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGK 187 (192)
T ss_pred CCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCe
Confidence 9999999999999999999999988764 48999999999973 578999999986443
No 478
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.4e-33 Score=327.40 Aligned_cols=199 Identities=26% Similarity=0.348 Sum_probs=161.7
Q ss_pred CcEEEEeEEEEcCC---CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCC---ccEEEeCCCCc------c
Q 000711 443 NYIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV---SGHIAKPGVGS------D 510 (1338)
Q Consensus 443 ~~i~~~~v~~~~~~---~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~---~G~i~~~~~~~------~ 510 (1338)
..++++|+++.|+. ..++++|+||+|++||+++|+|+||||||||+++|+|+++|. +|+|.++|.+- +
T Consensus 11 ~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~ 90 (330)
T PRK09473 11 ALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKE 90 (330)
T ss_pred ceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHH
Confidence 46999999998863 247999999999999999999999999999999999999996 99999999651 1
Q ss_pred ---cc-ccEEEEecCCC--C-CCCCHHHHhcCCCCCCc-ccCCCCHHHHHHHHHHcCCch---HHhcCCCCccccCCCCC
Q 000711 511 ---LN-KEIFYVPQRPY--T-AVGTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEY---LLDRYPPEKEINWGDEL 579 (1338)
Q Consensus 511 ---~~-~~i~~v~Q~~~--l-~~~tl~eni~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~~~~~~g~~L 579 (1338)
++ +.|+||||+|. + +..|+.+|+..+..... .......+++.++++.+++.+ ..++.| .+|
T Consensus 91 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p--------~~L 162 (330)
T PRK09473 91 LNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYP--------HEF 162 (330)
T ss_pred HHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCc--------ccC
Confidence 12 47999999983 4 34688888764321110 000112346778899999864 234444 689
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 580 SLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 580 SgGqkQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|||||||++|||||+.+|+++|+||||++||..+...+.+.+++ .|.|+|+|||+++.+. .+|+|++|.+
T Consensus 163 SgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~ 237 (330)
T PRK09473 163 SGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYA 237 (330)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999887753 3899999999999885 7999999976
No 479
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.2e-33 Score=319.25 Aligned_cols=206 Identities=24% Similarity=0.313 Sum_probs=164.3
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--CCcccEEEE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYV 1177 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~--~lr~~i~~V 1177 (1338)
++++|+++.|++ +++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++.... ..+.+++|+
T Consensus 2 l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (256)
T TIGR03873 2 LRLSRVSWSAGG-RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVALV 80 (256)
T ss_pred ceEEeEEEEECC-EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEEe
Confidence 689999999965 57999999999999999999999999999999999999999999999999887652 234579999
Q ss_pred cCCCCC-CCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCC
Q 000711 1178 PQRPYT-CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 1256 (1338)
Q Consensus 1178 pQdP~L-F~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~L 1256 (1338)
||+|.+ +..|+++|+.++....... .+. .....+..+.++++.+++.+..++. ...|
T Consensus 81 ~q~~~~~~~~tv~e~l~~~~~~~~~~------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~L 138 (256)
T TIGR03873 81 EQDSDTAVPLTVRDVVALGRIPHRSL------WAG------DSPHDAAVVDRALARTELSHLADRD----------MSTL 138 (256)
T ss_pred cccCccCCCCCHHHHHHhcchhhhhh------ccC------CCHHHHHHHHHHHHHcCcHhhhcCC----------cccC
Confidence 999964 5689999997642110000 000 0001123456677777775433221 3579
Q ss_pred ChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCc-ccccceEEEecCC
Q 000711 1257 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1328 (1338)
Q Consensus 1257 SgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i-~~~d~~l~l~~g~ 1328 (1338)
|||||||++||||++.+|+++||||||++||.++.+.+.+.+++ .+.|+|+++|+++.+ ..+|+++.|.+|+
T Consensus 139 S~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 214 (256)
T TIGR03873 139 SGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGR 214 (256)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999999999999999887776643 389999999999977 7899999997765
No 480
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.2e-33 Score=316.96 Aligned_cols=198 Identities=22% Similarity=0.305 Sum_probs=161.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCC-----c-c-------
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----S-D------- 510 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~-~------- 510 (1338)
.++++||++.|++ .++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ . .
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (253)
T TIGR02323 3 LLQVSGLSKSYGG-GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAERR 81 (253)
T ss_pred eEEEeeeEEEeCC-ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHHH
Confidence 5899999999964 579999999999999999999999999999999999999999999998753 1 0
Q ss_pred --ccccEEEEecCCCC---CCCCHHHHhcCCCC-CCcccCCCCHHHHHHHHHHcCCc-hHHhcCCCCccccCCCCCChhH
Q 000711 511 --LNKEIFYVPQRPYT---AVGTLRDQLIYPLT-SDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGE 583 (1338)
Q Consensus 511 --~~~~i~~v~Q~~~l---~~~tl~eni~~~~~-~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGq 583 (1338)
.++.++|++|+|.. +..|+.+|+.+... .........++++.++++.+++. +..++.+ ..|||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~--------~~LSgG~ 153 (253)
T TIGR02323 82 RLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLP--------RAFSGGM 153 (253)
T ss_pred HhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCc--------hhcCHHH
Confidence 12469999999852 34588888854210 00000011245677889999986 3555544 6899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc----cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 584 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 584 kQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
|||++|||||+.+|+++||||||++||+.+.+.+++.+++ .|.|+|+|||+++.+. .+|++++|+++
T Consensus 154 ~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G 225 (253)
T TIGR02323 154 QQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQG 225 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECC
Confidence 9999999999999999999999999999999999887754 3899999999999886 69999999863
No 481
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=316.94 Aligned_cols=199 Identities=29% Similarity=0.361 Sum_probs=163.5
Q ss_pred CCcEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCC------CC------c
Q 000711 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPG------VG------S 509 (1338)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~------~~------~ 509 (1338)
...++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .+ .
T Consensus 8 ~~~i~~~~~~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 8 EDVFNISRLYLYIN-DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred hhheeeeeEEEecC-CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 35699999999995 56899999999999999999999999999999999999999998777665 32 1
Q ss_pred cccccEEEEecCCCCCCC-CHHHHhcCCCCCCcccC-CCCHHHHHHHHHHcCCch----HHhcCCCCccccCCCCCChhH
Q 000711 510 DLNKEIFYVPQRPYTAVG-TLRDQLIYPLTSDQEVE-PLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGE 583 (1338)
Q Consensus 510 ~~~~~i~~v~Q~~~l~~~-tl~eni~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGq 583 (1338)
..++.++|+||+|.++.+ |++||+.++........ ....+++.++++.+++++ ..++. ...|||||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------~~~LS~G~ 158 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYDRLNSP--------ASQLSGGQ 158 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchhhhcCC--------cccCCHHH
Confidence 235679999999988875 99999987532110000 011245677888888864 23332 36899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhH-hhcceEEEccC
Q 000711 584 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1338)
Q Consensus 584 kQRlalARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~-~~~d~i~~l~~ 649 (1338)
|||++||||++.+|++++|||||++||+.+++.+.+.+.+ .+.|+|++||+++.+ ..||++++|++
T Consensus 159 ~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~ 227 (257)
T PRK14246 159 QQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYN 227 (257)
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999998865 368999999999988 57999999986
No 482
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-33 Score=318.05 Aligned_cols=203 Identities=23% Similarity=0.323 Sum_probs=162.2
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--CCcccEEE
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFY 1176 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~--~lr~~i~~ 1176 (1338)
.|+++||+++|++ +++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.++|.++.... ..+.+++|
T Consensus 2 ~l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (258)
T PRK13548 2 MLEARNLSVRLGG-RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAV 80 (258)
T ss_pred eEEEEeEEEEeCC-eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEE
Confidence 3789999999975 57999999999999999999999999999999999999999999999999886542 23457999
Q ss_pred EcCCCCC-CCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCC
Q 000711 1177 VPQRPYT-CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1338)
Q Consensus 1177 VpQdP~L-F~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 1255 (1338)
+||+|.+ +..|++||+.++..... . .....+..+.++++.+++....++. ...
T Consensus 81 ~~q~~~~~~~~tv~e~l~~~~~~~~----------~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~ 134 (258)
T PRK13548 81 LPQHSSLSFPFTVEEVVAMGRAPHG----------L------SRAEDDALVAAALAQVDLAHLAGRD----------YPQ 134 (258)
T ss_pred EccCCcCCCCCCHHHHHHhhhcccC----------C------CcHHHHHHHHHHHHHcCCHhHhcCC----------ccc
Confidence 9999988 67899999975421000 0 0000123345666777764433221 357
Q ss_pred CChhHHHHHHHHHHhh------cCCCEEEeecCCCCCCHHHHHHHHHHHH----hcCCeEEEeccCCCCc-ccccceEEE
Q 000711 1256 LSLGEQQRLGMARLFF------HKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPALI-PFHSLELRL 1324 (1338)
Q Consensus 1256 LSgGQrQrlaiARAlL------r~p~ILiLDEATSaLD~~te~~i~~~~~----~~~~TvI~IAHRl~~i-~~~d~~l~l 1324 (1338)
||||||||++||||++ ++|++|||||||++||.++.+.+.+.++ ..+.|||+|+|.++.+ .++|+++.|
T Consensus 135 LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l 214 (258)
T PRK13548 135 LSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLL 214 (258)
T ss_pred CCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEE
Confidence 9999999999999999 5999999999999999999887776553 3489999999999866 589999999
Q ss_pred ecCC
Q 000711 1325 IDGE 1328 (1338)
Q Consensus 1325 ~~g~ 1328 (1338)
.+|.
T Consensus 215 ~~G~ 218 (258)
T PRK13548 215 HQGR 218 (258)
T ss_pred ECCE
Confidence 7664
No 483
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=317.80 Aligned_cols=210 Identities=19% Similarity=0.242 Sum_probs=162.4
Q ss_pred CCceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCC--C---CCceEEcCCCCCccc----
Q 000711 1097 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP--V---VSGSLTKPSQHIDEE---- 1167 (1338)
Q Consensus 1097 ~g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~--~---~sG~I~idg~dI~~~---- 1167 (1338)
+|.|+++|+++.|++ +++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++...
T Consensus 2 ~~~l~~~nl~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 80 (252)
T PRK14256 2 NNKVKLEQLNVHFGK-NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDP 80 (252)
T ss_pred CcEEEEEEEEEEeCC-eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCCh
Confidence 467999999999974 579999999999999999999999999999999999986 3 589999999988642
Q ss_pred cCCcccEEEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccC
Q 000711 1168 AGSGCGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGW 1246 (1338)
Q Consensus 1168 ~~lr~~i~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gl 1246 (1338)
...+.+++||||+|.+|. .|+++|+.++.... +. . .....++.+.++++.+++...+... +
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~----------~~---~--~~~~~~~~~~~~l~~~~l~~~~~~~---~ 142 (252)
T PRK14256 81 VSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLN----------GR---V--NRSEADEIVESSLKRVALWDEVKDR---L 142 (252)
T ss_pred HHhhccEEEEecCCCCCCcCcHHHHHHhHHHhc----------CC---C--CHHHHHHHHHHHHHHcCCchhhhHH---h
Confidence 234567999999999998 59999997532100 00 0 0000122344555565553221110 0
Q ss_pred cccCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCc-ccccceEE
Q 000711 1247 DANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELR 1323 (1338)
Q Consensus 1247 dt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i-~~~d~~l~ 1323 (1338)
+. ....||||||||++||||++++|++|||||||++||.++.+.+.+.+++ .+.|+|+|+|+++.+ +++|+++.
T Consensus 143 ~~---~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~ 219 (252)
T PRK14256 143 KS---NAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAF 219 (252)
T ss_pred hC---CcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEE
Confidence 11 2357999999999999999999999999999999999999888776653 378999999999865 78999999
Q ss_pred EecCC
Q 000711 1324 LIDGE 1328 (1338)
Q Consensus 1324 l~~g~ 1328 (1338)
|.+|.
T Consensus 220 l~~G~ 224 (252)
T PRK14256 220 FYMGD 224 (252)
T ss_pred EECCE
Confidence 97654
No 484
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.6e-33 Score=304.04 Aligned_cols=169 Identities=31% Similarity=0.452 Sum_probs=148.9
Q ss_pred cEEEEeEEEEcCC-----CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCC--CCCccEEEeCCCCc---cccc
Q 000711 444 YIEFSGVKVVTPT-----GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW--PLVSGHIAKPGVGS---DLNK 513 (1338)
Q Consensus 444 ~i~~~~v~~~~~~-----~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~--~~~~G~i~~~~~~~---~~~~ 513 (1338)
.++++||++.|++ ++++++|+||++++||+++|+||||||||||+++|+|++ +|++|+|.++|.+. ..++
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~ 82 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDKRSFRK 82 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCchHhhhh
Confidence 4889999999975 368999999999999999999999999999999999999 99999999998752 3467
Q ss_pred cEEEEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000711 514 EIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1338)
Q Consensus 514 ~i~~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1338)
.++|+||++.++. .|++||+.++.. + ..||||||||++||||
T Consensus 83 ~i~~~~q~~~~~~~~t~~~~i~~~~~----------------~---------------------~~LS~G~~qrv~lara 125 (194)
T cd03213 83 IIGYVPQDDILHPTLTVRETLMFAAK----------------L---------------------RGLSGGERKRVSIALE 125 (194)
T ss_pred eEEEccCcccCCCCCcHHHHHHHHHH----------------h---------------------ccCCHHHHHHHHHHHH
Confidence 7999999998876 599999865310 0 0599999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChh-hH-hhcceEEEccC
Q 000711 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPA-LV-AFHDVVLSLDG 649 (1338)
Q Consensus 593 l~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~-~~-~~~d~i~~l~~ 649 (1338)
++++|++++|||||++||+.+.+.+.+.+++ .++|+|++||+++ .+ ..+|++++|++
T Consensus 126 l~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~ 187 (194)
T cd03213 126 LVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ 187 (194)
T ss_pred HHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC
Confidence 9999999999999999999999999988764 4899999999986 34 57999999986
No 485
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.9e-34 Score=280.27 Aligned_cols=191 Identities=20% Similarity=0.308 Sum_probs=157.5
Q ss_pred CccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc--cCCcccEEEEcCCCCCCCCCH
Q 000711 1111 SQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTL 1188 (1338)
Q Consensus 1111 ~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~--~~lr~~i~~VpQdP~LF~GTI 1188 (1338)
++.++|+++||++.+||.++|+|||||||||+++.++-+.+|++|+++..|.|++.. ...|++++|+-|.|.||.+||
T Consensus 14 ~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~tV 93 (223)
T COG4619 14 GDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGDTV 93 (223)
T ss_pred CCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccccccch
Confidence 467899999999999999999999999999999999999999999999999999988 467889999999999999999
Q ss_pred HHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCChhHHHHHHHHH
Q 000711 1189 RDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRLGMAR 1268 (1338)
Q Consensus 1189 ReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSgGQrQrlaiAR 1268 (1338)
.||+.+|..-.. .+...+...+.++.+++.+-+ |+.+ -.+||||||||+||+|
T Consensus 94 eDNlifP~~~r~------------------rr~dr~aa~~llar~~l~~~~------L~k~---it~lSGGE~QriAliR 146 (223)
T COG4619 94 EDNLIFPWQIRN------------------RRPDRAAALDLLARFALPDSI------LTKN---ITELSGGEKQRIALIR 146 (223)
T ss_pred hhccccchHHhc------------------cCCChHHHHHHHHHcCCchhh------hcch---hhhccchHHHHHHHHH
Confidence 999998853100 000112223344555543221 1222 3579999999999999
Q ss_pred HhhcCCCEEEeecCCCCCCHHHHHHHHHHH----HhcCCeEEEeccCCC-CcccccceEEEecCC
Q 000711 1269 LFFHKPKFGILDECTNATSVDVEEQLYRLA----KDMGITFVTSSQRPA-LIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1269 AlLr~p~ILiLDEATSaLD~~te~~i~~~~----~~~~~TvI~IAHRl~-~i~~~d~~l~l~~g~ 1328 (1338)
-|---|+||+|||+|||||+.+.+.|.+++ ++.+..++=|+|..+ .++.++++..+.+|.
T Consensus 147 ~Lq~~P~ILLLDE~TsALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~ 211 (223)
T COG4619 147 NLQFMPKILLLDEITSALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGH 211 (223)
T ss_pred HhhcCCceEEecCchhhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCc
Confidence 999999999999999999999988877665 356899999999996 499999999997764
No 486
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.3e-33 Score=317.05 Aligned_cols=211 Identities=21% Similarity=0.316 Sum_probs=159.7
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCC--CCCCCceEEcCCCCCcccc---CCcccE
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGL--WPVVSGSLTKPSQHIDEEA---GSGCGI 1174 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl--~~~~sG~I~idg~dI~~~~---~lr~~i 1174 (1338)
|+++||++.|++ +++|+|+||+|++||+++|+||||||||||+++|.|+ ++|++|+|.++|.++.... ..+.++
T Consensus 1 l~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 79 (243)
T TIGR01978 1 LKIKDLHVSVED-KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGL 79 (243)
T ss_pred CeEeeEEEEECC-EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccce
Confidence 578999999974 5799999999999999999999999999999999999 4799999999999887652 234459
Q ss_pred EEEcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCccc
Q 000711 1175 FYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1338)
Q Consensus 1175 ~~VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 1253 (1338)
+||||+|.+|.+ |+++|+.++..... . . ... ... .....++.+.++++.+++.... .+... .
T Consensus 80 ~~v~q~~~~~~~~t~~~~~~~~~~~~~---~-~--~~~-~~~--~~~~~~~~~~~~l~~~~l~~~~------~~~~~--~ 142 (243)
T TIGR01978 80 FLAFQYPEEIPGVSNLEFLRSALNARR---S-A--RGE-EPL--DLLDFLKLLKAKLALLGMDEEF------LNRSV--N 142 (243)
T ss_pred EeeeccccccCCcCHHHHHHHHHHHhh---c-c--ccc-ccc--cHHHHHHHHHHHHHHcCCchhh------ccccc--c
Confidence 999999999886 89999864311000 0 0 000 000 0001123456667766663110 01111 1
Q ss_pred CCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCccc--ccceEEEecCC
Q 000711 1254 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIPF--HSLELRLIDGE 1328 (1338)
Q Consensus 1254 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i~~--~d~~l~l~~g~ 1328 (1338)
..||||||||++||||++++|++|||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+.. +|+++.|.+|+
T Consensus 143 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~ 222 (243)
T TIGR01978 143 EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGR 222 (243)
T ss_pred cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCE
Confidence 24999999999999999999999999999999999999888776643 47999999999987754 69999997664
No 487
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=319.58 Aligned_cols=209 Identities=22% Similarity=0.234 Sum_probs=161.1
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCceEEcCCCCCcc--c--cC
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV-----VSGSLTKPSQHIDE--E--AG 1169 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~-----~sG~I~idg~dI~~--~--~~ 1169 (1338)
.|+++||++.|++ +++|+|+||+|++||.+||+||||||||||+++|.|+++| ++|+|.+||.++.. . ..
T Consensus 4 ~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 82 (253)
T PRK14267 4 AIETVNLRVYYGS-NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIE 82 (253)
T ss_pred eEEEEeEEEEeCC-eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHH
Confidence 5899999999965 5699999999999999999999999999999999999987 49999999998862 2 23
Q ss_pred CcccEEEEcCCCCCCCC-CHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcc
Q 000711 1170 SGCGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1338)
Q Consensus 1170 lr~~i~~VpQdP~LF~G-TIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 1248 (1338)
.+.+++||||+|.+|.+ |+++|+.++.... +.. ...+..+..+.++++.+++...++. .++.
T Consensus 83 ~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~----------~~~----~~~~~~~~~~~~~l~~~~l~~~~~~---~~~~ 145 (253)
T PRK14267 83 VRREVGMVFQYPNPFPHLTIYDNVAIGVKLN----------GLV----KSKKELDERVEWALKKAALWDEVKD---RLND 145 (253)
T ss_pred HhhceeEEecCCccCCCCcHHHHHHHHHHhc----------Ccc----CCHHHHHHHHHHHHHHcCCccchhh---hhcc
Confidence 45579999999999976 9999996531000 000 0000012234455565555321110 0111
Q ss_pred cCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCc-ccccceEEEe
Q 000711 1249 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLI 1325 (1338)
Q Consensus 1249 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i-~~~d~~l~l~ 1325 (1338)
...+||||||||++||||++++|+++||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+ .++|+++.|.
T Consensus 146 ---~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~ 222 (253)
T PRK14267 146 ---YPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLY 222 (253)
T ss_pred ---ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEE
Confidence 2357999999999999999999999999999999999999888776643 368999999999864 6799999997
Q ss_pred cCC
Q 000711 1326 DGE 1328 (1338)
Q Consensus 1326 ~g~ 1328 (1338)
+|+
T Consensus 223 ~G~ 225 (253)
T PRK14267 223 LGK 225 (253)
T ss_pred CCE
Confidence 765
No 488
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=318.88 Aligned_cols=209 Identities=23% Similarity=0.242 Sum_probs=163.5
Q ss_pred CceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCceEEcCCCCCccc----c
Q 000711 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP-----VVSGSLTKPSQHIDEE----A 1168 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~-----~~sG~I~idg~dI~~~----~ 1168 (1338)
..|+++||+++|++ +++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++... .
T Consensus 19 ~~l~~~nl~~~~~~-~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 97 (267)
T PRK14237 19 IALSTKDLHVYYGK-KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVY 97 (267)
T ss_pred eEEEEeeEEEEECC-eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChH
Confidence 47999999999864 679999999999999999999999999999999999997 5799999999988542 2
Q ss_pred CCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcc
Q 000711 1169 GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1338)
Q Consensus 1169 ~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 1248 (1338)
..+++++||||+|.+|.+|+++|+.++... .+.. .....+..+.++++.+++...+... ++
T Consensus 98 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~----------~~~~-----~~~~~~~~~~~~l~~~~l~~~i~~~---~~- 158 (267)
T PRK14237 98 EMRKHIGMVFQRPNPFAKSIYENITFALER----------AGVK-----DKKVLDEIVETSLKQAALWDQVKDD---LH- 158 (267)
T ss_pred HHhcceEEEecCCccccccHHHHHHhHHHh----------cCCC-----CHHHHHHHHHHHHHHcCCCchhhhh---hc-
Confidence 235679999999999999999999754210 0000 0000123345566666653222110 11
Q ss_pred cCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCc-ccccceEEEe
Q 000711 1249 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLI 1325 (1338)
Q Consensus 1249 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i-~~~d~~l~l~ 1325 (1338)
.....||+|||||+|||||++++|++|||||||++||..+.+.+.+++++ .+.|+|+|+|+++.+ .++|+++.|.
T Consensus 159 --~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~ 236 (267)
T PRK14237 159 --KSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFY 236 (267)
T ss_pred --CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEE
Confidence 12357999999999999999999999999999999999999888776643 478999999999755 7899999997
Q ss_pred cCC
Q 000711 1326 DGE 1328 (1338)
Q Consensus 1326 ~g~ 1328 (1338)
+|+
T Consensus 237 ~G~ 239 (267)
T PRK14237 237 LGD 239 (267)
T ss_pred CCE
Confidence 664
No 489
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=318.77 Aligned_cols=208 Identities=20% Similarity=0.228 Sum_probs=160.9
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCceEEcCCCCCccc----cC
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP-----VVSGSLTKPSQHIDEE----AG 1169 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~-----~~sG~I~idg~dI~~~----~~ 1169 (1338)
.|+++||+++|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++ |.+|+|.+||.++... ..
T Consensus 4 ~l~~~~l~~~~~~-~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~ 82 (251)
T PRK14251 4 IISAKDVHLSYGN-YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVE 82 (251)
T ss_pred eEEEEeeEEEECC-eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHH
Confidence 4899999999975 579999999999999999999999999999999999997 4799999999988532 23
Q ss_pred CcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCccc
Q 000711 1170 SGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 1249 (1338)
Q Consensus 1170 lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 1249 (1338)
.+..++||||+|.+|++|+++|+.++... .+.. ..+..+..+.++++.++++.... ..++.
T Consensus 83 ~~~~i~~~~q~~~~~~~tv~enl~~~~~~----------~~~~-----~~~~~~~~~~~~l~~~~l~~~~~---~~~~~- 143 (251)
T PRK14251 83 LRKEVGMVFQQPTPFPFSVYDNVAYGLKI----------AGVK-----DKELIDQRVEESLKQAAIWKETK---DNLDR- 143 (251)
T ss_pred hhccEEEEecCCccCCCcHHHHHHHHHHH----------cCCC-----CHHHHHHHHHHHHHHcCCCcchH---HHhcc-
Confidence 35579999999999999999999753210 0000 00001123344555555531110 11122
Q ss_pred CcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCc-ccccceEEEec
Q 000711 1250 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLID 1326 (1338)
Q Consensus 1250 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i-~~~d~~l~l~~ 1326 (1338)
...+||||||||++||||++++|+++||||||++||+++.+.+.+.+++ .+.|+|+|+|+++.+ +++|+++.|.+
T Consensus 144 --~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~ 221 (251)
T PRK14251 144 --NAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMN 221 (251)
T ss_pred --ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEEC
Confidence 2357999999999999999999999999999999999999888776654 378999999999864 67899999976
Q ss_pred CC
Q 000711 1327 GE 1328 (1338)
Q Consensus 1327 g~ 1328 (1338)
|+
T Consensus 222 G~ 223 (251)
T PRK14251 222 GD 223 (251)
T ss_pred CE
Confidence 54
No 490
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=316.96 Aligned_cols=202 Identities=22% Similarity=0.228 Sum_probs=160.0
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCC-----ccEEEeCCCCc--------c
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV-----SGHIAKPGVGS--------D 510 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~-----~G~i~~~~~~~--------~ 510 (1338)
.++++||++.|+ ++++++|+||+|++||+++|+||||||||||+|+|+|+++|. +|+|.++|.+. .
T Consensus 4 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 82 (252)
T PRK14272 4 LLSAQDVNIYYG-DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVA 82 (252)
T ss_pred EEEEeeeEEEEC-CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHH
Confidence 588999999996 468999999999999999999999999999999999999874 89999998541 2
Q ss_pred ccccEEEEecCCCCCC-CCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHH
Q 000711 511 LNKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1338)
Q Consensus 511 ~~~~i~~v~Q~~~l~~-~tl~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1338)
+++.++|+||++.++. .|+.||+.++...... ......+.+.+.++.+++.+.+... ......+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~----~~~~~~~LS~G~~qrv~ 158 (252)
T PRK14272 83 MRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDR----LKTPATGLSGGQQQRLC 158 (252)
T ss_pred hhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhh----hcCCcccCCHHHHHHHH
Confidence 3457999999998887 5999999864321100 0000123344556666654322110 01123689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHh-hcceEEEccCC
Q 000711 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDGE 650 (1338)
Q Consensus 589 lARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~-~~d~i~~l~~~ 650 (1338)
||||++++|++++|||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|++++|+++
T Consensus 159 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G 223 (252)
T PRK14272 159 IARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVG 223 (252)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999998865 3689999999999876 68999999863
No 491
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=2e-33 Score=300.34 Aligned_cols=161 Identities=27% Similarity=0.380 Sum_probs=143.3
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCCCCccEEEeCCCCc-------cccccEE
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIF 516 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~ 516 (1338)
.++++|+++.| +++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++
T Consensus 4 ~l~~~~l~~~~-----~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (182)
T cd03215 4 VLEVRGLSVKG-----AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGIA 78 (182)
T ss_pred EEEEeccEEEe-----eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCeE
Confidence 58999999987 89999999999999999999999999999999999999999999998641 1345799
Q ss_pred EEecCC----CCCCCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000711 517 YVPQRP----YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1338)
Q Consensus 517 ~v~Q~~----~l~~~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1338)
|+||++ .++..|++||+.++.. ||||||||++||||
T Consensus 79 ~~~q~~~~~~~~~~~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~a 118 (182)
T cd03215 79 YVPEDRKREGLVLDLSVAENIALSSL----------------------------------------LSGGNQQKVVLARW 118 (182)
T ss_pred EecCCcccCcccCCCcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHH
Confidence 999985 3445799999976410 99999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHc---cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 593 l~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
++++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|++++|++
T Consensus 119 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~ 179 (182)
T cd03215 119 LARDPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYE 179 (182)
T ss_pred HccCCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecC
Confidence 9999999999999999999999999998764 3799999999998775 5999999976
No 492
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=318.44 Aligned_cols=209 Identities=21% Similarity=0.213 Sum_probs=162.2
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCceEEcCCCCCcccc----CC
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP-----VVSGSLTKPSQHIDEEA----GS 1170 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~-----~~sG~I~idg~dI~~~~----~l 1170 (1338)
-+++||++.|+ .+++|+|+||+|++||.++|+|+||||||||+++|.|+++ |++|+|.++|.++.... ..
T Consensus 6 ~~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 84 (251)
T PRK14244 6 ASVKNLNLWYG-SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLL 84 (251)
T ss_pred EEeeeEEEEEC-CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHH
Confidence 47899999986 4579999999999999999999999999999999999986 47999999999886532 24
Q ss_pred cccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccC
Q 000711 1171 GCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1338)
Q Consensus 1171 r~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 1250 (1338)
+.+++||||+|.+|.+|+++|+.++... .+.. . .....+..+.++++.+++...+.. -++
T Consensus 85 ~~~i~~v~q~~~~~~~tv~~ni~~~~~~----------~~~~---~-~~~~~~~~~~~~l~~~~l~~~~~~---~~~--- 144 (251)
T PRK14244 85 RAKVGMVFQKPNPFPKSIYDNVAYGPKL----------HGLA---K-NKKKLDEIVEKSLTSVGLWEELGD---RLK--- 144 (251)
T ss_pred hhhEEEEecCcccccCCHHHHHHHHHHh----------cCCC---C-CHHHHHHHHHHHHHHcCCCchhhh---Hhh---
Confidence 5679999999999999999999753100 0000 0 000112345566677666321110 001
Q ss_pred cccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCc-ccccceEEEecC
Q 000711 1251 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDG 1327 (1338)
Q Consensus 1251 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i-~~~d~~l~l~~g 1327 (1338)
.....||||||||++||||++++|+++||||||++||..+.+.+.+.+++ .++|+|+|+|+++.+ +++|+++.|.+|
T Consensus 145 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G 224 (251)
T PRK14244 145 DSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSG 224 (251)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECC
Confidence 12357999999999999999999999999999999999999988877654 489999999999875 579999999776
Q ss_pred CC
Q 000711 1328 EG 1329 (1338)
Q Consensus 1328 ~g 1329 (1338)
+-
T Consensus 225 ~i 226 (251)
T PRK14244 225 RI 226 (251)
T ss_pred EE
Confidence 53
No 493
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.7e-33 Score=305.87 Aligned_cols=191 Identities=20% Similarity=0.275 Sum_probs=154.9
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCccc-cCCcccEEEEc
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVP 1178 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~-~~lr~~i~~Vp 1178 (1338)
|+++||++.|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+++++|+|
T Consensus 2 l~~~~l~~~~~~-~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~i~~~~ 80 (200)
T PRK13540 2 LDVIELDFDYHD-QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKKDLCTYQKQLCFVG 80 (200)
T ss_pred EEEEEEEEEeCC-eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCccccCHHHHHhheEEec
Confidence 689999999865 5699999999999999999999999999999999999999999999999988643 23355799999
Q ss_pred CCCCCC-CCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccCCCC
Q 000711 1179 QRPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1338)
Q Consensus 1179 QdP~LF-~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 1257 (1338)
|+|.++ ..|+++|+.++..... .+..+.++++.+++.+..+ .. ...||
T Consensus 81 q~~~~~~~~tv~~~~~~~~~~~~---------------------~~~~~~~~l~~~~l~~~~~-------~~---~~~LS 129 (200)
T PRK13540 81 HRSGINPYLTLRENCLYDIHFSP---------------------GAVGITELCRLFSLEHLID-------YP---CGLLS 129 (200)
T ss_pred cccccCcCCCHHHHHHHHHhcCc---------------------chHHHHHHHHHcCCchhhh-------CC---hhhcC
Confidence 999987 5799999975311000 0123445566655533221 11 23699
Q ss_pred hhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh---cCCeEEEeccCCCCcccccceE
Q 000711 1258 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIPFHSLEL 1322 (1338)
Q Consensus 1258 gGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~---~~~TvI~IAHRl~~i~~~d~~l 1322 (1338)
+|||||++||||++++|++|||||||++||..+.+.+.+.+++ .++|+|+++|+...++-+|...
T Consensus 130 ~G~~~rv~laral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~ 197 (200)
T PRK13540 130 SGQKRQVALLRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEE 197 (200)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhh
Confidence 9999999999999999999999999999999999888776653 4899999999999887777653
No 494
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=319.41 Aligned_cols=208 Identities=22% Similarity=0.227 Sum_probs=165.1
Q ss_pred CceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc--CCcccEE
Q 000711 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIF 1175 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~--~lr~~i~ 1175 (1338)
-.|+++||+++|++ +.+|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++.... ..+.+++
T Consensus 6 ~~l~i~~l~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (265)
T PRK10253 6 ARLRGEQLTLGYGK-YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIG 84 (265)
T ss_pred cEEEEEEEEEEECC-EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhheE
Confidence 47999999999975 56999999999999999999999999999999999999999999999999886542 2345799
Q ss_pred EEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcccC
Q 000711 1176 YVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1338)
Q Consensus 1176 ~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 1254 (1338)
||||+|.+|. .|+++|+.++...... . .....+..+..+.++++.+++.....+ ...
T Consensus 85 ~v~q~~~~~~~~tv~~~~~~~~~~~~~------~------~~~~~~~~~~~~~~~l~~~~l~~~~~~----------~~~ 142 (265)
T PRK10253 85 LLAQNATTPGDITVQELVARGRYPHQP------L------FTRWRKEDEEAVTKAMQATGITHLADQ----------SVD 142 (265)
T ss_pred EeeccCcCCCCCcHHHHHHhCcccccc------c------ccCCCHHHHHHHHHHHHHcCCHHHhcC----------Ccc
Confidence 9999999875 6999999754210000 0 000000112345667777777543322 135
Q ss_pred CCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCC-CcccccceEEEecCC
Q 000711 1255 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPA-LIPFHSLELRLIDGE 1328 (1338)
Q Consensus 1255 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~-~i~~~d~~l~l~~g~ 1328 (1338)
.||||||||++||||++++|+++||||||++||.++.+.+.+.+++ .++|+|+++|+++ ..+++|+++.|.+|+
T Consensus 143 ~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~ 221 (265)
T PRK10253 143 TLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGK 221 (265)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 7999999999999999999999999999999999999888776543 3889999999997 558899999997664
No 495
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-33 Score=316.09 Aligned_cols=209 Identities=22% Similarity=0.262 Sum_probs=161.3
Q ss_pred CceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCceEEcCCCCCccc----c
Q 000711 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV-----VSGSLTKPSQHIDEE----A 1168 (1338)
Q Consensus 1098 g~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~-----~sG~I~idg~dI~~~----~ 1168 (1338)
|.|+++||++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++| ++|+|.+||.++... .
T Consensus 2 ~~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14240 2 GKISVKDLDLFYGD-FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVN 80 (250)
T ss_pred CeEEEEEEEEEECC-ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchH
Confidence 57999999999975 5799999999999999999999999999999999999863 699999999988642 2
Q ss_pred CCcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcc
Q 000711 1169 GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1338)
Q Consensus 1169 ~lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 1248 (1338)
..|.+++||||+|.+|+.|+++|+.++... .+.. ..+..++.+.++++.+++...+.. -++.
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~----------~~~~-----~~~~~~~~~~~~l~~~~l~~~l~~---~~~~ 142 (250)
T PRK14240 81 QLRKRVGMVFQQPNPFPMSIYDNVAYGPRT----------HGIK-----DKKKLDEIVEKSLKGAALWDEVKD---RLKK 142 (250)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHh----------cCCC-----CHHHHHHHHHHHHHHcCCchhhHH---HHhc
Confidence 345679999999999999999999753100 0000 000012234444555544221110 0111
Q ss_pred cCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCC-cccccceEEEe
Q 000711 1249 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPAL-IPFHSLELRLI 1325 (1338)
Q Consensus 1249 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~-i~~~d~~l~l~ 1325 (1338)
....||||||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++. .+.+|+++.|.
T Consensus 143 ---~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~ 219 (250)
T PRK14240 143 ---SALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFL 219 (250)
T ss_pred ---CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEE
Confidence 2357999999999999999999999999999999999999888776653 47899999999985 46799999997
Q ss_pred cCC
Q 000711 1326 DGE 1328 (1338)
Q Consensus 1326 ~g~ 1328 (1338)
+|+
T Consensus 220 ~G~ 222 (250)
T PRK14240 220 NGE 222 (250)
T ss_pred CCE
Confidence 764
No 496
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-33 Score=276.31 Aligned_cols=204 Identities=26% Similarity=0.329 Sum_probs=164.1
Q ss_pred ceEEeeeEEeCCC---ccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc------C
Q 000711 1099 SISFSKLDIITPS---QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA------G 1169 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~---~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~------~ 1169 (1338)
-|+.++++..-++ .-.+|++++|.|++||+||||||||||||||+.+|.|+-+|++|+|.+.|.++..++ .
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 5777787775433 356999999999999999999999999999999999999999999999999998872 3
Q ss_pred CcccEEEEcCCCCCC-CCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcc
Q 000711 1170 SGCGIFYVPQRPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1338)
Q Consensus 1170 lr~~i~~VpQdP~LF-~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 1248 (1338)
+.+++++|.|.-.|. +-|--||+..|..- .|.. .++ .-....+.|+.+||..-+.
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL----------~ge~-----~~~-~~~~A~~lL~~vGLg~Rl~-------- 141 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLEL----------RGES-----SAD-SRAGAKALLEAVGLGKRLT-------- 141 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhh----------cCCc-----ccc-HHHHHHHHHHHhCcccccc--------
Confidence 455899999998875 46888998777421 1100 000 1112345667777643222
Q ss_pred cCcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHH----HhcCCeEEEeccCCCCcccccceEEE
Q 000711 1249 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLA----KDMGITFVTSSQRPALIPFHSLELRL 1324 (1338)
Q Consensus 1249 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~----~~~~~TvI~IAHRl~~i~~~d~~l~l 1324 (1338)
....+|||||+||+|||||+.-.|+||+-||||-+||.+|-+.|..++ ++.|.|.|.|+|.+.+-.-|++.+++
T Consensus 142 --HyP~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~Rc~R~~r~ 219 (228)
T COG4181 142 --HYPAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAARCDRQLRL 219 (228)
T ss_pred --cCccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHhhhheeee
Confidence 235689999999999999999999999999999999999998877654 45799999999999999999999999
Q ss_pred ecCC
Q 000711 1325 IDGE 1328 (1338)
Q Consensus 1325 ~~g~ 1328 (1338)
.+|+
T Consensus 220 ~~G~ 223 (228)
T COG4181 220 RSGR 223 (228)
T ss_pred ecce
Confidence 7764
No 497
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-33 Score=303.59 Aligned_cols=175 Identities=21% Similarity=0.293 Sum_probs=147.1
Q ss_pred cEEEEeEEEEcCC---CCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC---CCccEEEeCCCC-----cccc
Q 000711 444 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP---LVSGHIAKPGVG-----SDLN 512 (1338)
Q Consensus 444 ~i~~~~v~~~~~~---~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~---~~~G~i~~~~~~-----~~~~ 512 (1338)
.+.++||+|.||. ++++++|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|.+ ...+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~ 82 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYP 82 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhc
Confidence 4789999999985 4689999999999999999999999999999999999999 899999999864 1245
Q ss_pred ccEEEEecCCCCCC-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHHHH
Q 000711 513 KEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 591 (1338)
Q Consensus 513 ~~i~~v~Q~~~l~~-~tl~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlalAR 591 (1338)
+.++|+||++.++. .|++||+.++... . .++. ...||||||||++|||
T Consensus 83 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~------------~-----------~~~~--------~~~LS~Ge~qrl~lar 131 (202)
T cd03233 83 GEIIYVSEEDVHFPTLTVRETLDFALRC------------K-----------GNEF--------VRGISGGERKRVSIAE 131 (202)
T ss_pred ceEEEEecccccCCCCcHHHHHhhhhhh------------c-----------cccc--------hhhCCHHHHHHHHHHH
Confidence 67999999998776 5999999874210 0 1222 2589999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHc---c-CCeEEEEec-Chhh-HhhcceEEEccC
Q 000711 592 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISH-RPAL-VAFHDVVLSLDG 649 (1338)
Q Consensus 592 al~~~p~illLDEpts~LD~~~~~~i~~~l~~---~-~~t~i~itH-~~~~-~~~~d~i~~l~~ 649 (1338)
|++++|+++||||||++||+.+++.+++.+++ . +.|+|+++| +.+. ...+|++++|++
T Consensus 132 al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~ 195 (202)
T cd03233 132 ALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE 195 (202)
T ss_pred HHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC
Confidence 99999999999999999999999999988764 2 567666655 4444 468999999987
No 498
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=317.57 Aligned_cols=208 Identities=20% Similarity=0.246 Sum_probs=161.4
Q ss_pred ceEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCC---CCC--CCceEEcCCCCCccc----cC
Q 000711 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGL---WPV--VSGSLTKPSQHIDEE----AG 1169 (1338)
Q Consensus 1099 ~I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl---~~~--~sG~I~idg~dI~~~----~~ 1169 (1338)
.|+++||++.|++ +++|+|+||+|++||.+||+||||||||||+++|.|+ ++| ++|+|.+||.++... ..
T Consensus 3 ~l~~~~~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 81 (250)
T PRK14245 3 KIDARDVNFWYGD-FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDE 81 (250)
T ss_pred EEEEEEEEEEECC-EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHH
Confidence 5899999999965 5699999999999999999999999999999999997 454 589999999988652 23
Q ss_pred CcccEEEEcCCCCCCCCCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCccc
Q 000711 1170 SGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 1249 (1338)
Q Consensus 1170 lr~~i~~VpQdP~LF~GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 1249 (1338)
.+.+++||||+|.+|.+|+++|+.++... .+.. ..+..+..+.++++.+++...++.. ++
T Consensus 82 ~~~~i~~v~q~~~~~~~tv~~nl~~~~~~----------~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~---~~-- 141 (250)
T PRK14245 82 LRKNVGMVFQRPNPFPKSIFENVAYGLRV----------NGVK-----DNAFIRQRVEETLKGAALWDEVKDK---LK-- 141 (250)
T ss_pred HhhheEEEecCCccCcccHHHHHHHHHHH----------cCCC-----cHHHHHHHHHHHHHHcCCCcchhhh---hh--
Confidence 35579999999999999999999653110 0000 0000123345566666653222110 01
Q ss_pred CcccCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh--cCCeEEEeccCCCCc-ccccceEEEec
Q 000711 1250 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLID 1326 (1338)
Q Consensus 1250 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~--~~~TvI~IAHRl~~i-~~~d~~l~l~~ 1326 (1338)
.....||||||||++||||++++|+++||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+ .++|+++.|.+
T Consensus 142 -~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~ 220 (250)
T PRK14245 142 -ESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYM 220 (250)
T ss_pred -CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEEC
Confidence 12357999999999999999999999999999999999999988777654 479999999999865 77999999976
Q ss_pred CC
Q 000711 1327 GE 1328 (1338)
Q Consensus 1327 g~ 1328 (1338)
|+
T Consensus 221 G~ 222 (250)
T PRK14245 221 GE 222 (250)
T ss_pred CE
Confidence 54
No 499
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-33 Score=314.06 Aligned_cols=201 Identities=23% Similarity=0.255 Sum_probs=163.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCcHHHHHHHHcCCCC-----CCccEEEeCCCCc--------c
Q 000711 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS--------D 510 (1338)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~~sl~i~~G~~~~i~G~sGsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~--------~ 510 (1338)
.++++||++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.+. .
T Consensus 3 ~l~~~~v~~~~~-~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~ 81 (250)
T PRK14266 3 RIEVENLNTYFD-DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVE 81 (250)
T ss_pred EEEEEeEEEEeC-CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHH
Confidence 478999999986 4679999999999999999999999999999999999864 4899999999641 2
Q ss_pred ccccEEEEecCCCCCCCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCchHHhcCCCCccccCCCCCChhHHHHHHH
Q 000711 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1338)
Q Consensus 511 ~~~~i~~v~Q~~~l~~~tl~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1338)
+++.++|+||+|.++..|++||+.++....... .....+++.++++.+++.+.+.... ......||||||||++|
T Consensus 82 ~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~----~~~~~~LS~Gq~qrv~l 157 (250)
T PRK14266 82 LRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDKL----DKSALGLSGGQQQRLCI 157 (250)
T ss_pred HhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHHH----hCCcccCCHHHHHHHHH
Confidence 356799999999999899999998753211100 0112345777888988865432210 01236899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHc--cCCeEEEEecChhhHh-hcceEEEccC
Q 000711 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1338)
Q Consensus 590 ARal~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~itH~~~~~~-~~d~i~~l~~ 649 (1338)
|||++++|++++|||||++||+.+...+.+.+++ .+.|+|++||+++.+. .+|+++++++
T Consensus 158 aral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~ 220 (250)
T PRK14266 158 ARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLN 220 (250)
T ss_pred HHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEEC
Confidence 9999999999999999999999999999998865 3789999999998765 6888988876
No 500
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-33 Score=331.29 Aligned_cols=202 Identities=21% Similarity=0.173 Sum_probs=157.8
Q ss_pred eEEeeeEEeCCCccccccccceEEeCCCEEEEEcCCCCcHHHHHHHHhCCCCCCCceEEcCCCCCcccc------CCccc
Q 000711 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA------GSGCG 1173 (1338)
Q Consensus 1100 I~f~nV~f~yp~~~~vL~~lsf~I~~GekvaIVG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~dI~~~~------~lr~~ 1173 (1338)
+++++|.-.| +..++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.|+.... .++.+
T Consensus 29 ~~~~~~~~~~-~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~ 107 (400)
T PRK10070 29 LSKEQILEKT-GLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKK 107 (400)
T ss_pred ccHHHHHhhc-CCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCC
Confidence 3444443333 2235899999999999999999999999999999999999999999999999987652 12357
Q ss_pred EEEEcCCCCCCC-CCHHHHhcCCCchHHHHHHHHhhhcCCccccccccCchHHHHHHHhhCCchhhhhhhcccCcccCcc
Q 000711 1174 IFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 1252 (1338)
Q Consensus 1174 i~~VpQdP~LF~-GTIReNL~~p~~~~~~~~~a~~~a~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~ 1252 (1338)
|+||||+|.+|. .|++||+.++... .+.. ....++.+.++++.++|....++.
T Consensus 108 igyv~Q~~~l~~~~Tv~enl~~~~~~----------~~~~------~~~~~~~~~e~L~~~gL~~~~~~~---------- 161 (400)
T PRK10070 108 IAMVFQSFALMPHMTVLDNTAFGMEL----------AGIN------AEERREKALDALRQVGLENYAHSY---------- 161 (400)
T ss_pred EEEEECCCcCCCCCCHHHHHHHHHHh----------cCCC------HHHHHHHHHHHHHHcCCChhhhcC----------
Confidence 999999999997 5999999764210 0000 000123455677777775544333
Q ss_pred cCCCChhHHHHHHHHHHhhcCCCEEEeecCCCCCCHHHHHHHHHHHHh----cCCeEEEeccCCCC-cccccceEEEecC
Q 000711 1253 EDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPAL-IPFHSLELRLIDG 1327 (1338)
Q Consensus 1253 g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSaLD~~te~~i~~~~~~----~~~TvI~IAHRl~~-i~~~d~~l~l~~g 1327 (1338)
..+||||||||++|||||+++|++||||||||+||+.+.+.+++.+++ .++|+|+|+|+++. .+++|+++.|.+|
T Consensus 162 ~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G 241 (400)
T PRK10070 162 PDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNG 241 (400)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECC
Confidence 247999999999999999999999999999999999999888776532 48999999999975 5789999999765
Q ss_pred C
Q 000711 1328 E 1328 (1338)
Q Consensus 1328 ~ 1328 (1338)
+
T Consensus 242 ~ 242 (400)
T PRK10070 242 E 242 (400)
T ss_pred E
Confidence 3
Done!