Query 000712
Match_columns 1336
No_of_seqs 729 out of 5475
Neff 7.0
Searched_HMMs 29240
Date Tue Mar 26 17:56:37 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000712.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_483-487//hhsearch_pdb/000712hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1oxw_A Patatin; alpha/beta cla 1.0 1 1 396.9 27.3 301 535-904 11-364 (373)
2 4ecn_A Leucine-rich repeat pro 1.0 1 1 236.4 17.7 283 119-412 442-785 (876)
3 4eco_A Uncharacterized protein 1.0 1 1 234.8 13.9 283 119-412 200-545 (636)
4 4ecn_A Leucine-rich repeat pro 1.0 1 1 234.3 17.5 156 123-279 489-657 (876)
5 3rgz_A Protein brassinosteroid 1.0 1 1 231.6 16.4 270 119-414 94-379 (768)
6 4eco_A Uncharacterized protein 1.0 1 1 231.4 15.4 311 120-444 242-600 (636)
7 3rgz_A Protein brassinosteroid 1.0 1 1 220.7 21.3 267 120-414 72-354 (768)
8 3oja_B Anopheles plasmodium-re 1.0 1 1 220.2 22.0 288 116-443 66-357 (597)
9 3g06_A SSPH2 (leucine-rich rep 1.0 1 1 214.9 23.6 342 125-531 61-409 (622)
10 4akf_A VIPD; transferase; 2.90 1.0 1 1 211.2 13.5 205 538-787 35-304 (577)
No 1
>1oxw_A Patatin; alpha/beta class fold with approximately three layers; 2.20A {Solanum cardiophyllum} SCOP: c.19.1.3
Probab=1.00 E-value=1 Score=396.93 Aligned_cols=301 Identities=21% Similarity=0.301 Sum_probs=243.6
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHC----C---CCCCCCCCEEEEECHHHHHHHHHHCCC------CCHHHHH
Q ss_conf 89997339994287045899999999999721----9---974455563996026899999998166------7899999
Q 000712 535 VPKQGLRILSMDGGGMKGLATVQILKEIEKGT----G---KRIHELFDLVCGTSTGGMLAIALAVKL------MTLDQCE 601 (1336)
Q Consensus 535 ~~~~g~rILsLDGGGiRGl~~l~iL~~Le~~~----g---~~i~~~FDlI~GTStGgIiA~~La~~~------~s~~e~~ 601 (1336)
.++.+.++|||||||+||+++++||++||+.+ | .+++++||+|+|||+|||+|++|+.+. |++++|.
T Consensus 11 ~~~~~~~~LsLdGGG~RG~~~~gvL~~Lee~l~~~~G~~~~~i~~~fD~I~GTS~Gaiiaa~la~g~~~~r~~~s~~el~ 90 (373)
T 1oxw_A 11 QLGEMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYFDVIGGTSTGGLLTAMISTPNENNRPFAAAKEIV 90 (373)
T ss_dssp -CCSCEEEEEECCCGGGGHHHHHHHHHHHHHHHHHTTCTTCCHHHHCSEEEECTHHHHHHHHHHSBCTTSSBSSCGGGHH
T ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEECHHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 78997499997689689999999999999987762598667704217889997789999999856786677767999999
Q ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEE
Q ss_conf 99998063333589998525677888777785302445236532788525899999999830778620133220388939
Q 000712 602 EIYKNLGKLVFAEPFPKDNEAATWREKLDQIYKSSSQSFRVVVHGSKHSADQFERLLKEMCADEDGDLLIESSVKNIPKV 681 (1336)
Q Consensus 602 ~~y~~l~~~iF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ky~~~~Le~~Lke~~~~~~g~~~~~~~~~~~~kv 681 (1336)
++|.++++++|..+. .+.+++|+.+.++++|++.++ +..+.+... ++
T Consensus 91 ~~~~~~~~~iF~~~~--------------------------~l~~~~~~~~~L~~~l~~~~~----~~~l~d~~~---~~ 137 (373)
T 1oxw_A 91 PFYFEHGPQIFNPSG--------------------------QILGPKYDGKYLMQVLQEKLG----ETRVHQALT---EV 137 (373)
T ss_dssp HHHHHHHHHHTCCCC--------------------------CSSSCSCCCHHHHHHHHHHHT----TCBGGGCSS---EE
T ss_pred HHHHHHHHHHCCCCC--------------------------CCCCCCCCCHHHHHHHHHHHC----CCCHHHCCC---CE
T ss_conf 999996475468887--------------------------646488686899999999978----672888089---88
Q ss_pred EEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 99998621579908994258899999998765567887321489987764454433344777630999998813899999
Q 000712 682 FTVSTLVNVMPAQPFIFRNYQYPAGTPEVPFSISENSGITVLGSPTTGAQVGYKRSAFIGSCKHQVWQAIRASSAAPYYL 761 (1336)
Q Consensus 682 ~Vv~t~~d~~~~~p~lFrnY~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~IweA~RASSAAP~yF 761 (1336)
+|++ +|+.++++++|++|+.+... ..+.++|+|+|||||+|+||
T Consensus 138 ~i~a--td~~~~~~~~f~~~~~~~~~----------------------------------~~~~~l~~av~ASsA~P~~F 181 (373)
T 1oxw_A 138 VISS--FDIKTNKPVIFTKSNLANSP----------------------------------ELDAKMYDISYSTAAAPTYF 181 (373)
T ss_dssp EEEE--EETTTTEEEEEESSSTTTCG----------------------------------GGCCBHHHHHHHHHCCTTTS
T ss_pred EEEE--EECCCCCEEEEECCCCCCCC----------------------------------CCCCHHHHHHHHHCCCCCCC
T ss_conf 9995--88899975898589877787----------------------------------66730999999974687576
Q ss_pred CCEEEC-----CC----CCCCCCCCC-CCHHHHHHHHHHHHCCCC-----------CCCEEEEECCCCCCCC---C---C
Q ss_conf 653508-----83----222575567-742999999999939999-----------8779999389999997---6---7
Q 000712 762 DDFSDD-----VF----RWQDGAIVA-NNPTIFAIREAQLLWPDT-----------RIDCLVSIGCGSVPTK---T---R 814 (1336)
Q Consensus 762 ~pv~i~-----g~----~yvDGGi~~-NNP~~~Ai~Ea~~l~p~~-----------~i~~VVSIGTG~~~~~---~---~ 814 (1336)
+|+.++ |. .|+|||+.+ |||+..|+.|++.+|+.. +..||||||||..+.. . .
T Consensus 182 ~p~~i~~~d~~G~~~~~~~vDGGv~~~NnP~~~a~~ea~~~~~~~~~~~~~~~~~~~~~~vvSlGTG~~~~~~~~~~~~~ 261 (373)
T 1oxw_A 182 PPHYFVTNTSNGDEYEFNLVDGAVATVADPALLSISVATRLAQKDPAFASIRSLNYKKMLLLSLGTGTTSEFDKTYTAKE 261 (373)
T ss_dssp CCEEEEEECTTSCEEEEEEEEGGGGTCSSCHHHHHHHHHHHTTTCGGGTTSTTCCGGGEEEEEECCCCBCTTSSCCCHHH
T ss_pred CCEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHH
T ss_conf 86796114778860412463673024688489999999987356842233454666836999956888877554567555
Q ss_pred CCCCCCCCCCCHHHHH--HHCHHHHHHHHHHHCCC-CCCCCEEEECC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHH--
Q ss_conf 8884101364114552--11179999999988055-99998799825-899787889989988899999999999984--
Q 000712 815 RGGWRYLDTGQVLIES--ACSVDRAEEALSTLLPM-LPEIQYYRFNP-VDERCEMELDETDPAEWLKLEAAVDEYINN-- 888 (1336)
Q Consensus 815 ~~~w~~l~~~~~li~~--~~~~d~v~~~~~~~~~~-~~~~~YfRfnp-~~~~~~i~LDe~~~~~l~~l~~~t~~yl~~-- 888 (1336)
...|+...|..+++++ ..+.+.++..+..+++. ..+.+|||||| .+..+.+.+|+++++.+..+...+++|+.+
T Consensus 262 ~~~wG~~~w~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~Y~Ri~~~~l~~~~~~lD~~~~~~l~~L~~~~~~~l~~~~ 341 (373)
T 1oxw_A 262 AATWTAVHWMLVIQKMTDAASSYMTDYYLSTAFQALDSKNNYLRVQENALTGTTTEMDDASEANMELLVQVGENLLKKPV 341 (373)
T ss_dssp HTTCCHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTCGGGEEEECCCCBCGGGGCTTCCCHHHHHHHHHHHHHHHTSBS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 20101676899999999975489999999999621378884799758878876556542899999999999999995613
Q ss_pred -------HHHHHHHHHHHHCCCC
Q ss_conf -------1999999999960998
Q 000712 889 -------NSESFKNVCERLLLPF 904 (1336)
Q Consensus 889 -------n~~~l~~i~~~Ll~~~ 904 (1336)
|+++++++|+.|.+.+
T Consensus 342 ~~~~~~tn~~~l~~~a~~L~~e~ 364 (373)
T 1oxw_A 342 SEDNPETYEEALKRFAKLLSDRK 364 (373)
T ss_dssp SSSCCCBHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 10251228999999999999976
No 2
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=1.00 E-value=1 Score=236.38 Aligned_cols=283 Identities=18% Similarity=0.200 Sum_probs=188.8
Q ss_pred HHHCCCCCCCEEEEECCCCCC-----------------CCCCCCC--CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 320799997699920787998-----------------7753224--899867995779999999888423579877599
Q 000712 119 RVVKRREPLRAVVLTKGVGSG-----------------HLSDGIG--VLTRLMRSDLSTSGPGNNMGSGFCDHWKTVTAV 179 (1336)
Q Consensus 119 ~~l~~l~~L~~L~Ls~N~l~~-----------------~~p~~l~--~L~~L~~LdLs~N~~~~~~~~~~~~~L~~L~~L 179 (1336)
..+..+++|+.|+|++|.+++ .+|..+. ++++|+.|+|++|.+...+| ..+.++++|+.|
T Consensus 442 ~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP-~~l~~L~~L~~L 520 (876)
T 4ecn_A 442 KAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLP-DFLYDLPELQSL 520 (876)
T ss_dssp GGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCC-GGGGGCSSCCEE
T ss_pred HHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCH-HHHHCCCCCCEE
T ss_conf 8875699987897968867887465322332222224458744402559997789871898875273-877379998999
Q ss_pred ECCCCC-CCC--CCCCCCC-------CCCCCEEECCCCCCCCCCC--CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCE
Q ss_conf 757988-875--6622489-------9998689867998988931--127999874998317868435500017998879
Q 000712 180 SLCGLG-LSA--LPVDLTR-------LPVLEKLYLDNNKLSTLPP--ELGAMKNLKVLIVDNNMLVCVPVELRECVGLVE 247 (1336)
Q Consensus 180 ~Ls~N~-L~~--LP~~l~~-------L~~L~~L~Ls~N~L~~lP~--~l~~L~~L~~L~Ls~N~l~~lP~~l~~L~~L~~ 247 (1336)
+|++|. ++. +|..+.. +++|+.|++++|.++.+|. .+..+++|+.|++++|.+..+| .+..+++|+.
T Consensus 521 ~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~Ls~N~l~~lp-~~~~L~~L~~ 599 (876)
T 4ecn_A 521 NIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVRHLE-AFGTNVKLTD 599 (876)
T ss_dssp ECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEECTTSCCCBCC-CCCTTSEESE
T ss_pred ECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCH-HHCCCCCCEE
T ss_conf 896898765664617787523301556883199822894776187235515898898989799825621-2247985007
Q ss_pred EEECCCCCCCCCCCCCCCCC-CCEEECCCCCCCCCCC-CCCC--CCCCEEECCCCCCCC-CCCCCCCCCCCCCCCCCEEC
Q ss_conf 98036666677323478988-7599844898999878-7899--999889833888999-95311211102699997530
Q 000712 248 LSLEHNRLVRPLLDFRAMAE-LKILRLFGNPLEFLPE-ILPL--LKLRHLSLANIRIVA-DENLRSVNVQIEMENNSYFG 322 (1336)
Q Consensus 248 L~Ls~N~l~~~~~~l~~L~~-L~~L~Ls~N~L~~lp~-l~~l--~~L~~L~Ls~N~L~~-~~~L~~L~~~l~L~~L~~L~ 322 (1336)
|+|++|.+...+..+..+++ |+.|+|++|.++.+|. +..+ ++|+.|++++|.+.+ ++.+..-.....+.+++.++
T Consensus 600 L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~ 679 (876)
T 4ecn_A 600 LKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVT 679 (876)
T ss_dssp EECCSSCCSCCCTTSCEECTTCCEEECCSSCCCSCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEE
T ss_pred EECCCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHCCCCCCCCCEEE
T ss_conf 98718712503587752511498999849978747644522556777889770884788643200000013579768898
Q ss_pred CCCCCCCCCCCCCC-CCCC--------CCCHHHHHHH-----------HHH--HHCCCCCC-CCCCCCC--CCCCCCEEE
Q ss_conf 47888753100001-3588--------9851247889-----------866--50378742-2354430--124675898
Q 000712 323 ASRHKLSAFFSLIF-RFSS--------CHHPLLASAL-----------AKI--MQDQENRV-VVGKDEN--AVRQLISMI 377 (1336)
Q Consensus 323 ls~N~L~~l~p~l~-~ls~--------l~~~~l~~~L-----------~~l--L~L~~N~l-~lp~~~~--~L~~L~~L~ 377 (1336)
++.|.+..++..++ .++. +.+..++..+ ..+ |++++|.+ .+|..+. .+++|+.|+
T Consensus 680 Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~lp~~l~~~~l~~L~~L~ 759 (876)
T 4ecn_A 680 LSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMD 759 (876)
T ss_dssp CCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCCCCCGGGSTTTCTTCCEEE
T ss_pred CCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCEEE
T ss_conf 31996886597887138988999898996885496784555334321487158988899786652776244279869899
Q ss_pred CCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCC
Q ss_conf 57992035887544116865824210101136740
Q 000712 378 SSDNRHVVEQACSALSSLAGDVSVAMLLMKCDIMQ 412 (1336)
Q Consensus 378 Ls~N~~v~~~a~~~L~~Lp~~~~~l~~L~~ldl~~ 412 (1336)
|++|+ +..+|..+..+..|..+++.+
T Consensus 760 Ls~N~---------L~~lp~~l~~L~~L~~L~Ls~ 785 (876)
T 4ecn_A 760 VSYNC---------FSSFPTQPLNSSQLKAFGIRH 785 (876)
T ss_dssp CCSSC---------CSSCCCGGGGCTTCCEEECCC
T ss_pred ECCCC---------CCCCCHHHHCCCCCCEEECCC
T ss_conf 08997---------876105661599988998879
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=1.00 E-value=1 Score=234.81 Aligned_cols=283 Identities=18% Similarity=0.207 Sum_probs=189.5
Q ss_pred HHHCCCCCCCEEEEECCCCCCC-----------------CCCCCC--CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 3207999976999207879987-----------------753224--899867995779999999888423579877599
Q 000712 119 RVVKRREPLRAVVLTKGVGSGH-----------------LSDGIG--VLTRLMRSDLSTSGPGNNMGSGFCDHWKTVTAV 179 (1336)
Q Consensus 119 ~~l~~l~~L~~L~Ls~N~l~~~-----------------~p~~l~--~L~~L~~LdLs~N~~~~~~~~~~~~~L~~L~~L 179 (1336)
..+..+++|+.|+|++|.+++. +|..+. ++++|+.|+|++|.+...+| ..+.++++|+.|
T Consensus 200 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L 278 (636)
T 4eco_A 200 KAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLP-TFLKALPEMQLI 278 (636)
T ss_dssp GGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCC-TTTTTCSSCCEE
T ss_pred HHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHCCCCCCCEEEECCCCCCCCCH-HHHHCCCCCCEE
T ss_conf 7772564787898868823664232212222210010248632200446878889804885776283-888349997889
Q ss_pred ECCCCC-CC--CCCCCCCCC------CCCCEEECCCCCCCCCCC--CCCCCCCCCEEECCCCCCC-CCCCCCCCCCCCCE
Q ss_conf 757988-87--566224899------998689867998988931--1279998749983178684-35500017998879
Q 000712 180 SLCGLG-LS--ALPVDLTRL------PVLEKLYLDNNKLSTLPP--ELGAMKNLKVLIVDNNMLV-CVPVELRECVGLVE 247 (1336)
Q Consensus 180 ~Ls~N~-L~--~LP~~l~~L------~~L~~L~Ls~N~L~~lP~--~l~~L~~L~~L~Ls~N~l~-~lP~~l~~L~~L~~ 247 (1336)
++++|. ++ .+|..+..+ ++|++|++++|.++.+|. .+..+++|+.|++++|.+. .+| .+..+++|+.
T Consensus 279 ~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~ 357 (636)
T 4eco_A 279 NVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLAS 357 (636)
T ss_dssp ECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESE
T ss_pred ECCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCHH-HHCCCCCCCE
T ss_conf 784798876653357887543046578888898979937766765554257888989690880705166-6478898898
Q ss_pred EEECCCCCCCCCCCCCCCCC-CCEEECCCCCCCCCCC-CCC--CCCCCEEECCCCCCCCC--CCCCCCC-CCCCCCCCCE
Q ss_conf 98036666677323478988-7599844898999878-789--99998898338889999--5311211-1026999975
Q 000712 248 LSLEHNRLVRPLLDFRAMAE-LKILRLFGNPLEFLPE-ILP--LLKLRHLSLANIRIVAD--ENLRSVN-VQIEMENNSY 320 (1336)
Q Consensus 248 L~Ls~N~l~~~~~~l~~L~~-L~~L~Ls~N~L~~lp~-l~~--l~~L~~L~Ls~N~L~~~--~~L~~L~-~~l~L~~L~~ 320 (1336)
|++++|.+...+..+..+++ |+.|++++|.++.+|. +.. +++|+.|++++|.+.+. ..+.... ....+.+++.
T Consensus 358 L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~ 437 (636)
T 4eco_A 358 LNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSS 437 (636)
T ss_dssp EECCSSEEEECCTTSEEECTTCCEEECCSSCCSSCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEE
T ss_pred EECCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCE
T ss_conf 98989940303375651023686898529827544665533345766889774885788652442002201125898888
Q ss_pred ECCCCCCCCCCCCCCCC-CC--------CCCCHHHHHHH-----------HHH--HHCCCCCC-CCCCCCC--CCCCCCE
Q ss_conf 30478887531000013-58--------89851247889-----------866--50378742-2354430--1246758
Q 000712 321 FGASRHKLSAFFSLIFR-FS--------SCHHPLLASAL-----------AKI--MQDQENRV-VVGKDEN--AVRQLIS 375 (1336)
Q Consensus 321 L~ls~N~L~~l~p~l~~-ls--------~l~~~~l~~~L-----------~~l--L~L~~N~l-~lp~~~~--~L~~L~~ 375 (1336)
++++.|.+..+++.++. +. .+.+..++... ..+ |++++|.+ .+|..+. .+++|+.
T Consensus 438 L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~ 517 (636)
T 4eco_A 438 INLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVG 517 (636)
T ss_dssp EECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCCBCCGGGSTTTCTTCCE
T ss_pred EECCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCCE
T ss_conf 97727966867878871589889898979978873978840440012214773389896993881685453445887698
Q ss_pred EECCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCC
Q ss_conf 9857992035887544116865824210101136740
Q 000712 376 MISSDNRHVVEQACSALSSLAGDVSVAMLLMKCDIMQ 412 (1336)
Q Consensus 376 L~Ls~N~~v~~~a~~~L~~Lp~~~~~l~~L~~ldl~~ 412 (1336)
|++++|+ +..+|..+..+..|+.+++.+
T Consensus 518 L~Ls~N~---------l~~ip~~~~~l~~L~~L~Ls~ 545 (636)
T 4eco_A 518 IDLSYNS---------FSKFPTQPLNSSTLKGFGIRN 545 (636)
T ss_dssp EECCSSC---------CSSCCCGGGGCSSCCEEECCS
T ss_pred EECCCCC---------CCCCCHHHHCCCCCCEEECCC
T ss_conf 9898998---------877682353088878788988
No 4
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=1.00 E-value=1 Score=234.28 Aligned_cols=156 Identities=18% Similarity=0.129 Sum_probs=59.6
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCC-------CCCCCCEEECCCCCCCCCCC--C
Q ss_conf 999976999207879987753224899867995779999999-8884235-------79877599757988875662--2
Q 000712 123 RREPLRAVVLTKGVGSGHLSDGIGVLTRLMRSDLSTSGPGNN-MGSGFCD-------HWKTVTAVSLCGLGLSALPV--D 192 (1336)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~LdLs~N~~~~~-~~~~~~~-------~L~~L~~L~Ls~N~L~~LP~--~ 192 (1336)
.+++|+.|+|++|.+.+.+|..+.++++|+.|+|++|+.+.. ..+..+. .+++|+.|+|++|.++.+|. .
T Consensus 489 ~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~ 568 (876)
T 4ecn_A 489 NLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASAS 568 (876)
T ss_dssp GCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHH
T ss_pred CCCCCCEEECCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHH
T ss_conf 59997789871898875273877379998999896898765664617787523301556883199822894776187235
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC-CCEEEECCCCCCCCCCCCCCCC--CCC
Q ss_conf 4899998689867998988931127999874998317868435500017998-8799803666667732347898--875
Q 000712 193 LTRLPVLEKLYLDNNKLSTLPPELGAMKNLKVLIVDNNMLVCVPVELRECVG-LVELSLEHNRLVRPLLDFRAMA--ELK 269 (1336)
Q Consensus 193 l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~lP~~l~~L~~-L~~L~Ls~N~l~~~~~~l~~L~--~L~ 269 (1336)
+.++++|+.|+|++|.++.+| .+..+++|+.|++++|.+..+|..+..+++ |+.|+|++|.+...+..+..+. +|+
T Consensus 569 l~~L~~L~~L~Ls~N~l~~lp-~~~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~~lp~~~~~~~~~~L~ 647 (876)
T 4ecn_A 569 LQKMVKLGLLDCVHNKVRHLE-AFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMG 647 (876)
T ss_dssp HTTCTTCCEEECTTSCCCBCC-CCCTTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCCSCCSCCCTTCSSCEE
T ss_pred HHCCCCCCEEECCCCCCCCCH-HHCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCHHHHCCCCCCCC
T ss_conf 515898898989799825621-2247985007987187125035877525114989998499787476445225567778
Q ss_pred EEECCCCCCC
Q ss_conf 9984489899
Q 000712 270 ILRLFGNPLE 279 (1336)
Q Consensus 270 ~L~Ls~N~L~ 279 (1336)
.|++++|.+.
T Consensus 648 ~L~Ls~N~l~ 657 (876)
T 4ecn_A 648 SVDFSYNKIG 657 (876)
T ss_dssp EEECCSSCTT
T ss_pred EEECCCCCCC
T ss_conf 8977088478
No 5
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=1.00 E-value=1 Score=231.59 Aligned_cols=270 Identities=20% Similarity=0.179 Sum_probs=187.9
Q ss_pred HHHCCCCCCCEEEEECCCCCCCCCC--CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC-CC---
Q ss_conf 3207999976999207879987753--22489986799577999999988842357987759975798887566-22---
Q 000712 119 RVVKRREPLRAVVLTKGVGSGHLSD--GIGVLTRLMRSDLSTSGPGNNMGSGFCDHWKTVTAVSLCGLGLSALP-VD--- 192 (1336)
Q Consensus 119 ~~l~~l~~L~~L~Ls~N~l~~~~p~--~l~~L~~L~~LdLs~N~~~~~~~~~~~~~L~~L~~L~Ls~N~L~~LP-~~--- 192 (1336)
..+..+++|++|+|++|.+.+.+|. .+.++++|++|+|++|.+....+...+.++++|++|+|++|.++..+ ..
T Consensus 94 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 173 (768)
T 3rgz_A 94 SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVL 173 (768)
T ss_dssp CCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHH
T ss_pred HHHCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCHHHHH
T ss_conf 33245788998989898578707896787278899989896882677479778563889998989798358858715566
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC-CCCCCCCCCEE
Q ss_conf 48999986898679989889311279998749983178684355000179988799803666667732-34789887599
Q 000712 193 LTRLPVLEKLYLDNNKLSTLPPELGAMKNLKVLIVDNNMLVCVPVELRECVGLVELSLEHNRLVRPLL-DFRAMAELKIL 271 (1336)
Q Consensus 193 l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~lP~~l~~L~~L~~L~Ls~N~l~~~~~-~l~~L~~L~~L 271 (1336)
+.++++|++|++++|.+.... .+..+++|++|++++|.+...+..+..+++|++|++++|.+++..+ .+..+++|+.|
T Consensus 174 ~~~l~~L~~L~Ls~n~l~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L 252 (768)
T 3rgz_A 174 SDGCGELKHLAISGNKISGDV-DVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLL 252 (768)
T ss_dssp TTCCTTCCEEECCSSEEESCC-BCTTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEE
T ss_pred HCCCCCCCEEECCCCCCCCCC-CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEE
T ss_conf 435898898989788034657-8454786898989288278877111269999989794885878165777448888989
Q ss_pred ECCCCCCC-CCCCCCCCCCCCEEECCCCCCCC--CCCCCCCCCCCCCCCCCEECCCCCCCCCCCC-CCCCCCCCCCHHHH
Q ss_conf 84489899-98787899999889833888999--9531121110269999753047888753100-00135889851247
Q 000712 272 RLFGNPLE-FLPEILPLLKLRHLSLANIRIVA--DENLRSVNVQIEMENNSYFGASRHKLSAFFS-LIFRFSSCHHPLLA 347 (1336)
Q Consensus 272 ~Ls~N~L~-~lp~l~~l~~L~~L~Ls~N~L~~--~~~L~~L~~~l~L~~L~~L~ls~N~L~~l~p-~l~~ls~l~~~~l~ 347 (1336)
++++|.+. .+|.. .+++|+.|++++|.+++ +..+.. .+.+++.++++.|.+.+..| .+..+..++.
T Consensus 253 ~Ls~n~l~~~~~~~-~l~~L~~L~L~~n~l~~~ip~~~~~-----~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~---- 322 (768)
T 3rgz_A 253 NISSNQFVGPIPPL-PLKSLQYLSLAENKFTGEIPDFLSG-----ACDTLTGLDLSGNHFYGAVPPFFGSCSLLES---- 322 (768)
T ss_dssp ECCSSCCEESCCCC-CCTTCCEEECCSSEEEESCCCCSCT-----TCTTCSEEECCSSEEEECCCGGGGGCTTCCE----
T ss_pred ECCCCCCCCCCCCC-CCCCCCEEECCCCCCCCCCCHHHHH-----HCCCCCEEECCCCCCCCCCCHHHHCCCCCCE----
T ss_conf 89888665716724-3687898979178557725888884-----4686889989689677842367755877667----
Q ss_pred HHHHHHHHCCCCCC--CCCCC-CCCCCCCCEEECCCCCCHHHHHHHHHC-CCCCCHHHHC-CCCCCCCCCHH
Q ss_conf 88986650378742--23544-301246758985799203588754411-6865824210-10113674015
Q 000712 348 SALAKIMQDQENRV--VVGKD-ENAVRQLISMISSDNRHVVEQACSALS-SLAGDVSVAM-LLMKCDIMQPI 414 (1336)
Q Consensus 348 ~~L~~lL~L~~N~l--~lp~~-~~~L~~L~~L~Ls~N~~v~~~a~~~L~-~Lp~~~~~l~-~L~~ldl~~~~ 414 (1336)
|++++|.+ .+|.. +..+++|+.|++++|. +. .+|..+..+. .|..+++..+.
T Consensus 323 ------L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~---------l~~~~p~~l~~l~~~L~~L~Ls~N~ 379 (768)
T 3rgz_A 323 ------LALSSNNFSGELPMDTLLKMRGLKVLDLSFNE---------FSGELPESLTNLSASLLTLDLSSNN 379 (768)
T ss_dssp ------EECCSSEEEEECCHHHHTTCTTCCEEECCSSE---------EEECCCTTHHHHTTTCSEEECCSSE
T ss_pred ------EECCCCCCCCCCCHHHHHCCCCCCEEECCCCC---------CCCCCCHHHHHHHCCCCEEECCCCC
T ss_conf ------78978852573797887248888788484784---------3762309898632277199862787
No 6
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=1.00 E-value=1 Score=231.39 Aligned_cols=311 Identities=14% Similarity=0.075 Sum_probs=215.7
Q ss_pred HHC--CCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCC-CCCCCCCCCCCCC------CCCCEEECCCCCCCCCC
Q ss_conf 207--99997699920787998775322489986799577999-9999888423579------87759975798887566
Q 000712 120 VVK--RREPLRAVVLTKGVGSGHLSDGIGVLTRLMRSDLSTSG-PGNNMGSGFCDHW------KTVTAVSLCGLGLSALP 190 (1336)
Q Consensus 120 ~l~--~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~LdLs~N~-~~~~~~~~~~~~L------~~L~~L~Ls~N~L~~LP 190 (1336)
.+. .+++|+.|+|++|.+.+.+|..+.++++|+.|++++|+ +.....+..+..+ ++|+.|++++|.++.+|
T Consensus 242 ~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip 321 (636)
T 4eco_A 242 DLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFP 321 (636)
T ss_dssp CCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCC
T ss_pred HHHHCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCC
T ss_conf 22004468788898048857762838883499978897847988766533578875430465788888989799377667
Q ss_pred C--CCCCCCCCCEEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC-CCEEEECCCCCCCCCCCCCCCC
Q ss_conf 2--2489999868986799898-8931127999874998317868435500017998-8799803666667732347898
Q 000712 191 V--DLTRLPVLEKLYLDNNKLS-TLPPELGAMKNLKVLIVDNNMLVCVPVELRECVG-LVELSLEHNRLVRPLLDFRAMA 266 (1336)
Q Consensus 191 ~--~l~~L~~L~~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~l~~lP~~l~~L~~-L~~L~Ls~N~l~~~~~~l~~L~ 266 (1336)
. .+..+++|++|++++|.++ .+| .+..+++|+.|++++|.+..+|..+..+++ |+.|++++|.++..+..+..+.
T Consensus 322 ~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~~~ 400 (636)
T 4eco_A 322 VETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKS 400 (636)
T ss_dssp CHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCSSCCSCCCTTC
T ss_pred CHHHHCCCCCCCEEECCCCCCCCCHH-HHCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCHHHHHCC
T ss_conf 65554257888989690880705166-64788988989898994030337565102368689852982754466553334
Q ss_pred --CCCEEECCCCCCCC-CC-CCC-------CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
Q ss_conf --87599844898999-87-878-------99999889833888999953112111026999975304788875310000
Q 000712 267 --ELKILRLFGNPLEF-LP-EIL-------PLLKLRHLSLANIRIVADENLRSVNVQIEMENNSYFGASRHKLSAFFSLI 335 (1336)
Q Consensus 267 --~L~~L~Ls~N~L~~-lp-~l~-------~l~~L~~L~Ls~N~L~~~~~L~~L~~~l~L~~L~~L~ls~N~L~~l~p~l 335 (1336)
+|+.|++++|.++. +| .+. .+++|+.|++++|.++..+.-. +-.+++++.++++.|.+..++..+
T Consensus 401 l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~----~~~l~~L~~L~Ls~N~l~~i~~~~ 476 (636)
T 4eco_A 401 VSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKEL----FSTGSPLSSINLMGNMLTEIPKNS 476 (636)
T ss_dssp SSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHH----HHTTCCCSEEECCSSCCSBCCSSS
T ss_pred CCCCCEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCHHH----HCCCCCCCEEECCCCCCCCCCHHH
T ss_conf 5766889774885788652442002201125898888977279668678788----715898898989799788739788
Q ss_pred ----------------CCCCCCCCHHHHHHHH-----HH--HHCCCCCC-CCCCCCCCCCCCCEEECCCCCCHHHHHHHH
Q ss_conf ----------------1358898512478898-----66--50378742-235443012467589857992035887544
Q 000712 336 ----------------FRFSSCHHPLLASALA-----KI--MQDQENRV-VVGKDENAVRQLISMISSDNRHVVEQACSA 391 (1336)
Q Consensus 336 ----------------~~ls~l~~~~l~~~L~-----~l--L~L~~N~l-~lp~~~~~L~~L~~L~Ls~N~~v~~~a~~~ 391 (1336)
++++.+.+..++..+. .+ |++++|.+ .+|..+..+++|+.|++++|+.+.. ...
T Consensus 477 ~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~~ls~--N~l 554 (636)
T 4eco_A 477 LKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQG--NRT 554 (636)
T ss_dssp SEETTEECTTGGGCCEEECCSSCCCBCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCBCTTC--CBC
T ss_pred HCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEECCCCCCCCC--CCC
T ss_conf 404400122147733898969938816854534458876989898998877682353088878788988866566--731
Q ss_pred HCCCCCCHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf 11686582421010113674015765238992568654344411335560588
Q 000712 392 LSSLAGDVSVAMLLMKCDIMQPIIAVLKSFAPEEVKSVLQVVGQLAFASDTVA 444 (1336)
Q Consensus 392 L~~Lp~~~~~l~~L~~ldl~~~~l~~L~s~~~~~~~~~L~~L~~L~~~~~~i~ 444 (1336)
...+|..+..+..|+.+++.+|.+..++.... +.|..|.+..+.+.
T Consensus 555 ~~~~p~~l~~l~~L~~L~Ls~N~l~~ip~~~~-------~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 555 LREWPEGITLCPSLTQLQIGSNDIRKVNEKIT-------PNISVLDIKDNPNI 600 (636)
T ss_dssp CCCCCTTGGGCSSCCEEECCSSCCCBCCSCCC-------TTCCEEECCSCTTC
T ss_pred CCCCHHHHHCCCCCCEEECCCCCCCCCCHHHH-------CCCCEEECCCCCCC
T ss_conf 21273778569987889898994770597683-------86789987699876
No 7
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=1.00 E-value=1 Score=220.71 Aligned_cols=267 Identities=18% Similarity=0.161 Sum_probs=140.2
Q ss_pred HHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC-CCCCCCCCCCEEECCCCCCC-CCCCCC-CCC
Q ss_conf 207999976999207879987753224899867995779999999888-42357987759975798887-566224-899
Q 000712 120 VVKRREPLRAVVLTKGVGSGHLSDGIGVLTRLMRSDLSTSGPGNNMGS-GFCDHWKTVTAVSLCGLGLS-ALPVDL-TRL 196 (1336)
Q Consensus 120 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~LdLs~N~~~~~~~~-~~~~~L~~L~~L~Ls~N~L~-~LP~~l-~~L 196 (1336)
.+..++.|+.++++.+.+.. .|..+..+++|++|+|++|.+.+.++. ..++++++|++|+|++|.+. .+|..+ .++
T Consensus 72 ~l~~L~~L~~l~~~~~~~~~-l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l 150 (768)
T 3rgz_A 72 SLLSLTGLESLFLSNSHING-SVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKL 150 (768)
T ss_dssp HTTTCTTCCEEECTTSCEEE-CCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCC
T ss_pred HHHCCCCCCCCCCCCCCCCC-CCHHHCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCHHHHCCC
T ss_conf 57316802246786888678-70332457889989898985787078967872788999898968826774797785638
Q ss_pred CCCCEEECCCCCCC-CCCCC---CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 99868986799898-89311---279998749983178684355000179988799803666667732347898875998
Q 000712 197 PVLEKLYLDNNKLS-TLPPE---LGAMKNLKVLIVDNNMLVCVPVELRECVGLVELSLEHNRLVRPLLDFRAMAELKILR 272 (1336)
Q Consensus 197 ~~L~~L~Ls~N~L~-~lP~~---l~~L~~L~~L~Ls~N~l~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~l~~L~~L~~L~ 272 (1336)
++|++|++++|.++ ..|.. +..+++|++|++++|.+.... .+..+++|++|++++|.+.+.++.+..+++|+.|+
T Consensus 151 ~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~ 229 (768)
T 3rgz_A 151 NSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV-DVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLD 229 (768)
T ss_dssp TTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCC-BCTTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEE
T ss_pred CCCCEEECCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCC-CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 89998989798358858715566435898898989788034657-84547868989892882788771112699999897
Q ss_pred CCCCCCC-CCC-CCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCEECCCCCCCCCCCC-CCCCC-CCCCCHHHH
Q ss_conf 4489899-987-878999998898338889999-531121110269999753047888753100-00135-889851247
Q 000712 273 LFGNPLE-FLP-EILPLLKLRHLSLANIRIVAD-ENLRSVNVQIEMENNSYFGASRHKLSAFFS-LIFRF-SSCHHPLLA 347 (1336)
Q Consensus 273 Ls~N~L~-~lp-~l~~l~~L~~L~Ls~N~L~~~-~~L~~L~~~l~L~~L~~L~ls~N~L~~l~p-~l~~l-s~l~~~~l~ 347 (1336)
+++|.++ .++ .+..+++|+.|++++|.+.+. +.. .+.+++.++++.|.+.+..| .+... ..++.
T Consensus 230 Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~-------~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~---- 298 (768)
T 3rgz_A 230 ISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL-------PLKSLQYLSLAENKFTGEIPDFLSGACDTLTG---- 298 (768)
T ss_dssp CCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC-------CCTTCCEEECCSSEEEESCCCCSCTTCTTCSE----
T ss_pred CCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCC-------CCCCCCEEECCCCCCCCCCCHHHHHHCCCCCE----
T ss_conf 9488587816577744888898989888665716724-------36878989791785577258888844686889----
Q ss_pred HHHHHHHHCCCCCC--CCCCCCCCCCCCCEEECCCCCCHHHHHHHHHC-CCCCC-HHHHCCCCCCCCCCHH
Q ss_conf 88986650378742--23544301246758985799203588754411-68658-2421010113674015
Q 000712 348 SALAKIMQDQENRV--VVGKDENAVRQLISMISSDNRHVVEQACSALS-SLAGD-VSVAMLLMKCDIMQPI 414 (1336)
Q Consensus 348 ~~L~~lL~L~~N~l--~lp~~~~~L~~L~~L~Ls~N~~v~~~a~~~L~-~Lp~~-~~~l~~L~~ldl~~~~ 414 (1336)
|++++|.+ .+|..+..+++|+.|++++|. +. .+|.. +..+..|+.+++..+.
T Consensus 299 ------L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~---------l~~~ip~~~l~~l~~L~~L~Ls~n~ 354 (768)
T 3rgz_A 299 ------LDLSGNHFYGAVPPFFGSCSLLESLALSSNN---------FSGELPMDTLLKMRGLKVLDLSFNE 354 (768)
T ss_dssp ------EECCSSEEEECCCGGGGGCTTCCEEECCSSE---------EEEECCHHHHTTCTTCCEEECCSSE
T ss_pred ------EECCCCCCCCCCCHHHHCCCCCCEEECCCCC---------CCCCCCHHHHHCCCCCCEEECCCCC
T ss_conf ------9896896778423677558776677897885---------2573797887248888788484784
No 8
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=1.00 E-value=1 Score=220.21 Aligned_cols=288 Identities=15% Similarity=0.108 Sum_probs=203.5
Q ss_pred CCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC-CC
Q ss_conf 00332079999769992078799877532248998679957799999998884235798775997579888756622-48
Q 000712 116 VEMRVVKRREPLRAVVLTKGVGSGHLSDGIGVLTRLMRSDLSTSGPGNNMGSGFCDHWKTVTAVSLCGLGLSALPVD-LT 194 (1336)
Q Consensus 116 ~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~LdLs~N~~~~~~~~~~~~~L~~L~~L~Ls~N~L~~LP~~-l~ 194 (1336)
+....+..+++|+.|+|++|.+.+..+..|..+++|+.|+|++|. +...++..++++++|++|+|++|.++.+|.. +.
T Consensus 66 lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~ 144 (597)
T 3oja_B 66 LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNA-IRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFH 144 (597)
T ss_dssp ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSC-CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CCHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCEEECCCCC-CCCCCHHHHCCCCCCCEEEEECCCCCCCCHHHHC
T ss_conf 698988028997689898997999895786078988889897990-8998978875899998897438999977878764
Q ss_pred CCCCCCEEECCCCCCCCCC-CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 9999868986799898893-112799987499831786843550001799887998036666677323478988759984
Q 000712 195 RLPVLEKLYLDNNKLSTLP-PELGAMKNLKVLIVDNNMLVCVPVELRECVGLVELSLEHNRLVRPLLDFRAMAELKILRL 273 (1336)
Q Consensus 195 ~L~~L~~L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~l~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~l~~L~~L~~L~L 273 (1336)
.+++|++|+|++|.++.++ ..+..+++|+.|++++|.+..++ +..+++|+.|++++|.+... ....+|+.|++
T Consensus 145 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l~~l----~~~~~L~~L~l 218 (597)
T 3oja_B 145 NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTL----AIPIAVEELDA 218 (597)
T ss_dssp TCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCCSEE----ECCTTCSEEEC
T ss_pred CCCCCCEEEEECCCCCCCCHHHHHCCCCCCEEECCCCCCCCCC--HHHHHHHHHHHCCCCCCCCC----CCCCHHHEEEC
T ss_conf 6988788984689689877555522875737889688788768--56601466542014744333----57730420344
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHH
Q ss_conf 489899987878999998898338889999531121110269999753047888753100-0013588985124788986
Q 000712 274 FGNPLEFLPEILPLLKLRHLSLANIRIVADENLRSVNVQIEMENNSYFGASRHKLSAFFS-LIFRFSSCHHPLLASALAK 352 (1336)
Q Consensus 274 s~N~L~~lp~l~~l~~L~~L~Ls~N~L~~~~~L~~L~~~l~L~~L~~L~ls~N~L~~l~p-~l~~ls~l~~~~l~~~L~~ 352 (1336)
++|.+..++... .++|+.|++++|.+++++.+.. +++++.++++.|.+.+..+ .+..+..+..
T Consensus 219 s~n~l~~~~~~~-~~~L~~L~L~~n~l~~~~~l~~------l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~--------- 282 (597)
T 3oja_B 219 SHNSINVVRGPV-NVELTILKLQHNNLTDTAWLLN------YPGLVEVDLSYNELEKIMYHPFVKMQRLER--------- 282 (597)
T ss_dssp CSSCCCEEECSC-CSCCCEEECCSSCCCCCGGGGG------CTTCSEEECCSSCCCEEESGGGTTCSSCCE---------
T ss_pred CCCCCCCCCCCC-CCCCCEEECCCCCCCCCHHHCC------CCCCCEEECCCCCCCCCCHHHHCCCCCCCE---------
T ss_conf 678556556655-7878889898999999756625------898888789799658879778507558888---------
Q ss_pred HHHCCCCCC-CCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHH
Q ss_conf 650378742-2354430124675898579920358875441168658242101011367401576523899256865434
Q 000712 353 IMQDQENRV-VVGKDENAVRQLISMISSDNRHVVEQACSALSSLAGDVSVAMLLMKCDIMQPIIAVLKSFAPEEVKSVLQ 431 (1336)
Q Consensus 353 lL~L~~N~l-~lp~~~~~L~~L~~L~Ls~N~~v~~~a~~~L~~Lp~~~~~l~~L~~ldl~~~~l~~L~s~~~~~~~~~L~ 431 (1336)
|++++|.+ .+|..+..+++|+.|+|++|. +..+|..+..+..|..+++.+|.+..++ ...+.
T Consensus 283 -L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~---------l~~i~~~~~~l~~L~~L~L~~N~l~~~~-------~~~~~ 345 (597)
T 3oja_B 283 -LYISNNRLVALNLYGQPIPTLKVLDLSHNH---------LLHVERNQPQFDRLENLYLDHNSIVTLK-------LSTHH 345 (597)
T ss_dssp -EECTTSCCCEEECSSSCCTTCCEEECCSSC---------CCCCGGGHHHHTTCSEEECCSSCCCCCC-------CCTTC
T ss_pred -EECCCCCCCCCCCCCCCCCCCCEEECCCCC---------CCCCCCCCCCCCCCCEEECCCCCCCCCC-------HHHCC
T ss_conf -899799888777432469988389898998---------8855821014898898989899789869-------20139
Q ss_pred HHHCCCCCCCHH
Q ss_conf 441133556058
Q 000712 432 VVGQLAFASDTV 443 (1336)
Q Consensus 432 ~L~~L~~~~~~i 443 (1336)
.|..|.+..+.+
T Consensus 346 ~L~~L~l~~N~~ 357 (597)
T 3oja_B 346 TLKNLTLSHNDW 357 (597)
T ss_dssp CCSEEECCSSCE
T ss_pred CCCEEEEECCCC
T ss_conf 989899239899
No 9
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=1.00 E-value=1 Score=214.87 Aligned_cols=342 Identities=20% Similarity=0.148 Sum_probs=233.0
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 99769992078799877532248998679957799999998884235798775997579888756622489999868986
Q 000712 125 EPLRAVVLTKGVGSGHLSDGIGVLTRLMRSDLSTSGPGNNMGSGFCDHWKTVTAVSLCGLGLSALPVDLTRLPVLEKLYL 204 (1336)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~LdLs~N~~~~~~~~~~~~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~L 204 (1336)
++|+.|++++|.+.. +|. .+++|+.|+|++|+ +..++. .+++|++|+|++|.++.+|. .+++|+.|++
T Consensus 61 ~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~-l~~lp~----~l~~L~~L~Ls~N~l~~l~~---~l~~L~~L~L 128 (622)
T 3g06_A 61 AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQ-LTSLPV----LPPGLLELSIFSNPLTHLPA---LPSGLCKLWI 128 (622)
T ss_dssp TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCC-CSCCCC----CCTTCCEEEECSCCCCCCCC---CCTTCCEEEC
T ss_pred CCCCEEEECCCCCCC-CCC---CCCCCCEEECCCCC-CCCCCC----CCCCCCEEECCCCCCCCCCC---CCCCCCEEEC
T ss_conf 988589916998877-787---67878788857982-886787----78887889781896887788---7788698988
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
Q ss_conf 79989889311279998749983178684355000179988799803666667732347898875998448989998787
Q 000712 205 DNNKLSTLPPELGAMKNLKVLIVDNNMLVCVPVELRECVGLVELSLEHNRLVRPLLDFRAMAELKILRLFGNPLEFLPEI 284 (1336)
Q Consensus 205 s~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~l~~L~~L~~L~Ls~N~L~~lp~l 284 (1336)
++|.++.+|.. +++|++|++++|.++.+|.. +.+|+.|++++|.++.++ ..+++|+.|++++|.|+.+|..
T Consensus 129 ~~N~l~~lp~~---l~~L~~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~~l~---~~~~~L~~L~Ls~N~l~~l~~~ 199 (622)
T 3g06_A 129 FGNQLTSLPVL---PPGLQELSVSDNQLASLPAL---PSELCKLWAYNNQLTSLP---MLPSGLQELSVSDNQLASLPTL 199 (622)
T ss_dssp CSSCCSCCCCC---CTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCSCCCCC
T ss_pred CCCCCCCCCCC---CCCCCEEECCCCCCCCCCCC---CCCCCEEECCCCCCCCCC---CCCCCCCEEECCCCCCCCCCCC
T ss_conf 79977757887---89778897819968876776---677788889999788776---6578884778999978878875
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC-CC
Q ss_conf 89999988983388899995311211102699997530478887531000013588985124788986650378742-23
Q 000712 285 LPLLKLRHLSLANIRIVADENLRSVNVQIEMENNSYFGASRHKLSAFFSLIFRFSSCHHPLLASALAKIMQDQENRV-VV 363 (1336)
Q Consensus 285 ~~l~~L~~L~Ls~N~L~~~~~L~~L~~~l~L~~L~~L~ls~N~L~~l~p~l~~ls~l~~~~l~~~L~~lL~L~~N~l-~l 363 (1336)
+++|+.|++++|.++.++.. +++++.+++++|.+..++.. ++++ +.|++++|.+ .+
T Consensus 200 --~~~L~~L~L~~N~l~~l~~~--------~~~L~~L~Ls~N~L~~lp~~---l~~L----------~~L~Ls~N~L~~l 256 (622)
T 3g06_A 200 --PSELYKLWAYNNRLTSLPAL--------PSGLKELIVSGNRLTSLPVL---PSEL----------KELMVSGNRLTSL 256 (622)
T ss_dssp --CTTCCEEECCSSCCSSCCCC--------CTTCCEEECCSSCCSCCCCC---CTTC----------CEEECCSSCCSCC
T ss_pred --CCHHHEEECCCCCCCCCCCC--------CCCCCEEECCCCCCCCCCCC---CCCC----------CEEECCCCCCCCC
T ss_conf --35222777758736656777--------88779898118966768887---7847----------6888999987767
Q ss_pred CCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCC-CCCCH
Q ss_conf 54430124675898579920358875441168658242101011367401576523899256865434441133-55605
Q 000712 364 GKDENAVRQLISMISSDNRHVVEQACSALSSLAGDVSVAMLLMKCDIMQPIIAVLKSFAPEEVKSVLQVVGQLA-FASDT 442 (1336)
Q Consensus 364 p~~~~~L~~L~~L~Ls~N~~v~~~a~~~L~~Lp~~~~~l~~L~~ldl~~~~l~~L~s~~~~~~~~~L~~L~~L~-~~~~~ 442 (1336)
|. .+++|+.|+|++|. +..+|..+..+..|..+++.+|.+. ......++.+.... +....
T Consensus 257 p~---~~~~L~~L~Ls~N~---------L~~lp~~l~~l~~L~~L~L~~N~l~-------~~~~~~l~~L~~~~~~~g~~ 317 (622)
T 3g06_A 257 PM---LPSGLLSLSVYRNQ---------LTRLPESLIHLSSETTVNLEGNPLS-------ERTLQALREITSAPGYSGPI 317 (622)
T ss_dssp CC---CCTTCCEEECCSSC---------CCSCCGGGGGSCTTCEEECCSCCCC-------HHHHHHHHHHHHSTTCCSCE
T ss_pred CC---CCCCCCEEECCCCC---------CCCCCHHHHHCCCCCEEEECCCCCC-------CCCHHHHHHCCCCCCCCCCC
T ss_conf 76---65658577478997---------7727888760616698991399888-------86778897343563457970
Q ss_pred HHHHHHC---HHHHHHHHHHHHCCCHHHHHHHHHHHCCCC-CCCCCCHHHHCHHHHHHHHHHH-CCCCCHHHHHHHHHHH
Q ss_conf 8873213---679999999972279055668886603543-0112210224024677888776-0699825689999999
Q 000712 443 VAQKMLT---KDVLKSLKLLCAHKNPEVQRFALLAVGNLA-FCLENRRILVTSESLRDLLMRL-TVGPEPRVNKAAARAL 517 (1336)
Q Consensus 443 i~~~~~~---~~il~~L~~l~~~~~p~Vq~~aL~al~~la-f~~e~r~~~~~se~L~~~L~~l-~~s~~~~v~~~a~~~L 517 (1336)
....+.. ....+++......|.+..+.........+. +..+.....+ ..++ +.|.+. .....+++++.+..+|
T Consensus 318 ~~~~~~~~~~~~~~~pl~~~~~~Wf~~~~~~~~~~~~~W~~~~~E~ga~~f-~~fL-~rL~~t~~~~~~~~~~~rVw~~L 395 (622)
T 3g06_A 318 IRFDMAGASAPRETRALHLAAADWLVPAREGEPAPADRWHMFGQEDNADAF-SLFL-DRLSETENFIKDAGFKAQISSWL 395 (622)
T ss_dssp EECCSCCC----CCCCHHHHHHTTCCCC--------HHHHHHTTSTTHHHH-HHHH-HHHTTSHHHHHCTTHHHHHHHHH
T ss_pred EEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHH-HHHH-HHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 254058774444566641004554134432327899999987458488999-9999-86113424133988999999999
Q ss_pred HHHCCCHHHHHHHC
Q ss_conf 98111035667320
Q 000712 518 AILGENESLRRAIR 531 (1336)
Q Consensus 518 a~Lg~n~~lrr~~~ 531 (1336)
..+..++.+|+.+-
T Consensus 396 ~~~~~~~~LR~~lf 409 (622)
T 3g06_A 396 AQLAEDEALRANTF 409 (622)
T ss_dssp HHHHTCHHHHHHHH
T ss_pred HHHHCCHHHHHHHH
T ss_conf 99825999999999
No 10
>4akf_A VIPD; transferase; 2.90A {Legionella pneumophila}
Probab=1.00 E-value=1 Score=211.16 Aligned_cols=205 Identities=21% Similarity=0.241 Sum_probs=143.2
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 97339994287045899999999999721997445556399602689999999816678999999999806333358999
Q 000712 538 QGLRILSMDGGGMKGLATVQILKEIEKGTGKRIHELFDLVCGTSTGGMLAIALAVKLMTLDQCEEIYKNLGKLVFAEPFP 617 (1336)
Q Consensus 538 ~g~rILsLDGGGiRGl~~l~iL~~Le~~~g~~i~~~FDlI~GTStGgIiA~~La~~~~s~~e~~~~y~~l~~~iF~~~~~ 617 (1336)
+..+.|+|+|||+||++++|+|++|++. | +...||+|+|||+|||+|++++.+ ++.+++.++|..+...-|....+
T Consensus 35 ~~~~~LvLsGGG~RG~~hiGVL~aLee~-G--i~p~~d~IaGTSaGAIiAa~~A~G-~s~~el~~~~~~l~~~~~~d~s~ 110 (577)
T 4akf_A 35 PEHKGLVLSGGGAKGISYLGMIQALQER-G--KIKNLTHVSGASAGAMTASILAVG-MDIKDIKKLIEGLDITKLLDNSG 110 (577)
T ss_dssp CCCCEEEECCCSSGGGTHHHHHHHHHHT-T--CGGGCCEEEECTHHHHHHHHHHTT-CCHHHHHHHHTTCCTTTTSCSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHHC-C--CCCCCCEEEEECHHHHHHHHHHCC-CCHHHHHHHHHHCCHHHHHCCCC
T ss_conf 7736999778589999999999999976-9--986677798676818989999809-99999999998399999608652
Q ss_pred CC--HHHHHHHHHHHHHH--------HHCCCC--CEEEECCCCCCHH---HHHHHHHHHHCC------------------
Q ss_conf 85--25677888777785--------302445--2365327885258---999999998307------------------
Q 000712 618 KD--NEAATWREKLDQIY--------KSSSQS--FRVVVHGSKHSAD---QFERLLKEMCAD------------------ 664 (1336)
Q Consensus 618 ~~--~~~~~~~~~~~~~~--------~~~~~~--~~~~~~~~ky~~~---~Le~~Lke~~~~------------------ 664 (1336)
.. .....+...++..+ .+..+. .+.....+.|+++ .+++++++.+..
T Consensus 111 l~~~~~~~ll~~~l~~~~~~~~k~~l~~v~~~~~~~l~~~~Gl~~G~~~~~le~wl~e~l~~~~~d~~~~~~~~~~~~~~ 190 (577)
T 4akf_A 111 VGFRARGDRFRNILDVIYMMQMKKHLESVQQPIPPEQQMNYGILKQKIALYEDKLSRAGIVINNVDDIINLTKSVKDLEK 190 (577)
T ss_dssp SSSCBCSHHHHHHHHHHHHHHHHHHHTTSCSCCCSTHHHHHHHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf 23453155654312233210111111110134553211447513785268899999998720133210000000012456
Q ss_pred --------------------CCCCHHHHHHHC-----------CCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf --------------------786201332203-----------8893999998621579908994258899999998765
Q 000712 665 --------------------EDGDLLIESSVK-----------NIPKVFTVSTLVNVMPAQPFIFRNYQYPAGTPEVPFS 713 (1336)
Q Consensus 665 --------------------~~g~~~~~~~~~-----------~~~kv~Vv~t~~d~~~~~p~lFrnY~~~~~~~~~~~~ 713 (1336)
.+.+.++.+... ..+++++++| |+.++++++|++.+.+
T Consensus 191 L~~~~~~~p~~l~~~kg~~tg~~~iTF~dL~~l~~~~p~~~~~~~k~L~IvAT--Dv~TGk~v~F~~~~~~--------- 259 (577)
T 4akf_A 191 LDKALNSIPTELKGAKGEQLENPRLTLGDLGRLRELLPEENKHLIKNLSVVVT--NQTKHELERYSEDTTP--------- 259 (577)
T ss_dssp HHHHHHTSCSCCBCTTCCBCCCSSCBHHHHHHHHHHSCGGGGGGSCEEEEEEE--ETTTTEEEEEETTTCT---------
T ss_pred HHHHHCCCCCHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEE--ECCCCCEEEECCCCCC---------
T ss_conf 66542023200001345556788867999764025674322457871999999--8899998983799989---------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCE-EECCCCCCCCCCCCCCHHHHHHH
Q ss_conf 567887321489987764454433344777630999998813899999653-50883222575567742999999
Q 000712 714 ISENSGITVLGSPTTGAQVGYKRSAFIGSCKHQVWQAIRASSAAPYYLDDF-SDDVFRWQDGAIVANNPTIFAIR 787 (1336)
Q Consensus 714 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~IweA~RASSAAP~yF~pv-~i~g~~yvDGGi~~NNP~~~Ai~ 787 (1336)
+..+++|+|||||+|+||+|+ .+++..|+|||+.+|||+..++.
T Consensus 260 ------------------------------d~~l~dAVRASsAlP~~F~PV~~IdG~~yvDGGV~~N~PV~~lfd 304 (577)
T 4akf_A 260 ------------------------------QQSIAQVVQWSGAHPVLFVPGRNAKGEYIADGGILDNMPEIEGLD 304 (577)
T ss_dssp ------------------------------TSBHHHHHHHHTCCTTTBCCEECTTCCEEECTTSSSCCCCCTTSC
T ss_pred ------------------------------CCCHHHHHHHHHCCCCCCCCEEEECCEEEECCCCCCCCCHHHHHH
T ss_conf ------------------------------878999999982830412587868998977787346775699872
Done!