Query 000713
Match_columns 1335
No_of_seqs 418 out of 4478
Neff 7.0
Searched_HMMs 29240
Date Tue Mar 26 18:29:43 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000713.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_483-487//hhsearch_pdb/000713hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1288.2 101.1 1062 252-1325 1-1172(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1006.9 96.4 1007 306-1327 44-1128(1284)
3 4a82_A Cystic fibrosis transme 1.0 1 1 633.7 65.8 547 302-851 6-575 (578)
4 3qf4_B Uncharacterized ABC tra 1.0 1 1 623.0 62.0 543 305-853 32-591 (598)
5 4f4c_A Multidrug resistance pr 1.0 1 1 620.4 57.1 543 308-853 750-1317(1321)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 618.4 69.8 549 299-853 12-579 (587)
7 3b60_A Lipid A export ATP-bind 1.0 1 1 596.9 70.2 542 303-852 18-579 (582)
8 3b5x_A Lipid A export ATP-bind 1.0 1 1 596.0 75.6 542 303-852 18-579 (582)
9 2yl4_A ATP-binding cassette SU 1.0 1 1 593.4 69.1 546 303-852 12-583 (595)
10 3g5u_A MCG1178, multidrug resi 1.0 1 1 543.5 58.1 545 307-854 702-1272(1284)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1288.16 Aligned_cols=1062 Identities=17% Similarity=0.204 Sum_probs=795.4
Q ss_pred HHHHCC-CCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHCC------------CCCCCHHHHHHHHH----HHHHHHH
Q ss_conf 998203-598888999899902008999999999998823109------------99981479999999----8999999
Q 000713 252 LMKRGR-EKTLGDEDIPDLRKAEQAESCYFQFLDQLNKQKQAE------------PSSQPSILRTILIC----HWRDIFM 314 (1335)
Q Consensus 252 l~~~g~-~~~L~~~Dl~~l~~~d~a~~~~~~f~~~w~~~~~~~------------~~~~~sl~~al~~~----~~~~~~~ 314 (1335)
|++.|. |++|+.+|.+++.++|..+...+.+++.|.....+. ..++.+ ++.|+|. .+.-+++
T Consensus 1 ~~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~Lfrya~~~d~~l~~~ 79 (1321)
T 4f4c_A 1 MLRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVS-IPQLYRYTTTLEKLLLFI 79 (1321)
T ss_dssp ---CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCC-HHHHTTTCCHHHHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC-HHHHHHCCCHHHHHHHHH
T ss_conf 9877310068763544567950111000011345424355433431001223202568779-999731567678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------------CC-----HHHHHHHHH---HHHHHHHHHH-HHHHH
Q ss_conf 999999999999999999999999960178---------------74-----368999999---9999999999-99999
Q 000713 315 SGFFALIKVLTLSAGPLFLNAFILVAESKA---------------GF-----KYEGYLLAI---TLFLAKILES-LSQRQ 370 (1335)
Q Consensus 315 ~~~~~l~~~~~~~~~P~ll~~li~~~~~~~---------------~~-----~~~g~~l~~---~l~~~~~~~s-l~~~~ 370 (1335)
+.+++++..+...+.+++++.+++.+.+.. .. ...-..++. +++++..+.+ +....
T Consensus 80 g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~ 159 (1321)
T 4f4c_A 80 GTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTC 159 (1321)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999701000145430003443100168999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999997389555327998899999999999998899-999999999999999999998897
Q 000713 371 RYFRSRLIGLKVRSLLTAAIYRKQLRLSNAARLMHSGGEIMNYVTVDAYRIGEFP-FWFHQIWTTSVQLCIALIILFHAV 449 (1335)
Q Consensus 371 ~~~~~~~~g~riR~~l~~~Iy~K~L~ls~~~~~~~s~GeIvNlmsvD~~ri~~~~-~~~~~lw~~plqi~ial~lL~~~l 449 (1335)
+.+ .|.|+-..+...+|+|.++++..--+.+++|+++|.+++|++++.++. ..+..++..+++++.++++++..-
T Consensus 160 ~~~----~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~~~ 235 (1321)
T 4f4c_A 160 YLY----VAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHS 235 (1321)
T ss_dssp HHH----HHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHH----HHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999----9999999999999999978898998799848999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79999999999999999999999999999999999999999999997127999984617999999999999999999999
Q 000713 450 GLATIAALVVITITVLCNTPLAKLQHKFQTKLMVAQDERLKACSEAFVNMKVLKLYAWETHFKNAIEILRNVEYKWLSAV 529 (1335)
Q Consensus 450 G~s~l~gl~v~il~~~~~~~l~~~~~~~q~~~m~~~D~Ri~~~sEiL~~IrvIKl~aWE~~f~~~I~~~R~~El~~l~~~ 529 (1335)
...+++.++++++..++...+++...+..++.++..+++.+.++|.++|||+||+|+||+.+.+++.+..++..+...+.
T Consensus 236 ~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 315 (1321)
T 4f4c_A 236 WQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLK 315 (1321)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999839999982142999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999968986899--999999999999833764488899999999999999999999999999999999999998639
Q 000713 530 QLRKAYNGFLFWSSP--VLVSTATFGACYFLNVPLYASNVFTFVATLRLVQDPIRIIPDVIGVFIQANVAFSRIVNFLEA 607 (1335)
Q Consensus 530 ~~~~a~~~~~~~~~p--~lv~~~tF~~~~l~g~~Lta~~vFt~lalf~~L~~pl~~lp~~i~~~~qa~vS~~RI~~FL~~ 607 (1335)
....+.......... .++.+++++.+.+.++.++++.+|+++.++..+..|+..++..+..+.++.+|++||.+||+.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 395 (1321)
T 4f4c_A 316 GLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDR 395 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999995998699999999999999999998999999999999999999999717
Q ss_pred CCC-CCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
Q ss_conf 978-7200012588778764199985699826999999500002685099299998679887899999985689899837
Q 000713 608 PEL-QSMNIRQKGNIENVNRAISIKSASFSWEESSSKPTMRNISLEVRPGQKVAICGEVGSGKSTLLAAILGEVPHTQGT 686 (1335)
Q Consensus 608 ~e~-~~~~~~~~~~~~~~~~~I~i~~~~f~w~~~~~~~~L~~i~l~i~~G~~v~IvG~~GsGKStLl~~ilGe~~~~~G~ 686 (1335)
++. ++......+ ..+.++.|+++|++|+|+..++.++|+|+||++++|++++|+||+|||||||+++|+|+++|.+|+
T Consensus 396 ~~~~~~~~~~~~~-~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~~~~~~G~ 474 (1321)
T 4f4c_A 396 KPVIDSSSKAGRK-DMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGK 474 (1321)
T ss_dssp SCCSSCSSSCCCC-CCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTSSCCSEEE
T ss_pred CCCCCCCCCCCCC-CCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCC
T ss_conf 8534566655656-778887679998554079999874333318862288278998058985778888754565164486
Q ss_pred EEECC-------------EEEEEECCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 99929-------------3999915776888888898413999-993789999998133788840999998522688887
Q 000713 687 IQVYG-------------KTAYVSQTAWIQTGSIRENILFGSP-MDSHQYQETLERCSLIKDLELLPYGDNTEIGERGVN 752 (1335)
Q Consensus 687 v~v~g-------------~iayv~Q~pwi~~~TireNIlfg~~-~~~~~y~~vl~~c~L~~dl~~lp~Gd~T~IGe~G~~ 752 (1335)
|.++| +++||+|+||++++||||||.||.+ .+++++.++++.|++++|++.||+||+|+|||+|.+
T Consensus 475 I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~vGe~G~~ 554 (1321)
T 4f4c_A 475 ITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVGDRGTQ 554 (1321)
T ss_dssp EEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSEESSSSCC
T ss_pred CCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCC
T ss_conf 15799650112599985046665875332078616788641552209999999987565468870888886075589887
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEE
Q ss_conf 79799999999999814997999828888889998999999999997399789998168886123796999949969881
Q 000713 753 LSGGQKQRIQLARALYQDADIYLLDDPFSAVDAHTASSLFNDYVMEALSGKVVLLVTHQVDFLPAFDSVLLMSDGEILRA 832 (1335)
Q Consensus 753 LSGGQkqRi~LARAly~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kTvilvTH~~~~l~~~D~iivl~~G~i~~~ 832 (1335)
|||||||||+||||+|+||+||+|||||||||+++ ++++++++.+.+++||+|+|||+++.++.||+|++|++|+|+++
T Consensus 555 LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~t-e~~i~~~l~~~~~~~T~iiiaHrls~i~~aD~Iivl~~G~ive~ 633 (1321)
T 4f4c_A 555 LSGGQKQRIAIARALVRNPKILLLDEATSALDAES-EGIVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNGQVVEV 633 (1321)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTT-HHHHHHHHHHHHTTSEEEEECSCTTTTTTCSEEEEEETTEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHH-HHHHHHHHHHHHCCCEEEEECCCHHHHHHCCEEEEEECCEEECC
T ss_conf 77778799999998725999899845544688789-99999999998479889997363878986898999639965136
Q ss_pred CCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC-----C----CCCCCC-CC--CCCCCC----------C------CCC
Q ss_conf 383799715458999999834210432222368-----8----868899-82--111234----------4------421
Q 000713 833 APYHQLLASSKEFQELVSAHKETAGSERLAEVT-----P----SQKSGM-PA--KEIKKG----------H------VEK 884 (1335)
Q Consensus 833 G~~~eL~~~~~~f~~l~~~~~~~~~~~~~~~~~-----~----~~~~~~-~~--~~~~~~----------~------~~~ 884 (1335)
|+|+||++.++.|.++...+......+...+.. + ....+. .. .+.+.. . ..+
T Consensus 634 Gth~eL~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (1321)
T 4f4c_A 634 GDHRALMAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSITNGPVIDE 713 (1321)
T ss_dssp ECHHHHHTTTCHHHHHHHHHHHHHHHHHHHCC------------------------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHH
T ss_conf 89999998532799999962212222332334433223211122222342222222110221110132124567740257
Q ss_pred CCC--CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHH-CCCCCC--CCCH
Q ss_conf 000--123320124556321875517899999820235999999999999999999875----7661-344578--7650
Q 000713 885 QFE--VSKGDQLIKQEERETGDIGLKPYIQYLNQNKGFLFFSIASLSHLTFVIGQILQN----SWLA-ANVENP--NVST 955 (1335)
Q Consensus 885 ~~~--~~~~~~l~~~E~r~~G~v~~~vy~~Y~~~~~g~~~~~~~~~~~~~~~~~~~~s~----~wl~-w~~~~~--~~~~ 955 (1335)
.++ .........+|.++.|..++..|+.|......++...+.+++.++......... .|+. +..+.. ....
T Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1321)
T 4f4c_A 714 KEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQG 793 (1321)
T ss_dssp --CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTH
T ss_pred HHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 77531540389999999970786310999999987789999999999999999999999999999987517934556678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 378999999999999999999999999999999999999999987087541014--680035878716866888334999
Q 000713 956 LRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDS--TPLGRILSRVSSDLSIVDLDIPFS 1033 (1335)
Q Consensus 956 ~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~as~~lh~~ll~~il~apmsFFD~--tp~GrIlnRfS~D~~~iD~~lp~~ 1033 (1335)
.+|..+|.+++++..++.+++.+++...+.++++++|++++++++++||+|||+ ||+|+|+|||++|++.+|..++..
T Consensus 794 ~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~ 873 (1321)
T 4f4c_A 794 HFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFR 873 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998887349933321678884888850250599999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHCCCCCHHHHHHHHHHCCHHHHHHC
Q ss_conf 99999999999999999999978999999999999999999999768--9999987000025899999987063888730
Q 000713 1034 LIFAVGATTNACSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFVTA--KELMRLNGTTKSLVANHLAESIAGAMTIRAF 1111 (1335)
Q Consensus 1034 ~~~~~~~~~~~~~~i~vi~~~~p~~~~~~ipl~~~~~~~~~~y~~ts--rel~Rl~~~~rspi~~~f~Etl~G~~tIRAf 1111 (1335)
+..++..++.+++.++++++..|++.+++++++++.++...++.+.. ++.++.+ ..+....++.|+++|+.|||+|
T Consensus 874 l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~e~l~gi~tIra~ 951 (1321)
T 4f4c_A 874 FSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSAS--EFADSGKIAIEAIENVRTVQAL 951 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSS--HHHHHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999986537777022137868999999998889999999999999999999999--9888988999999627988861
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 61899999999988510461798999989999999799999999---999998745998768779999999999999999
Q 000713 1112 EEEDRFFAKNLDLIDTNASPFFHSFAANEWLIQRLETLSATVIS---SAAFCMVLLPPGTFTPGFIGMALSYGLSLNSSL 1188 (1335)
Q Consensus 1112 ~~~~~f~~~~~~~ld~~~~~~~~~~~~~~Wl~~rl~~l~~~~~~---~~a~~~v~~~~~~~~~~~~Glalsyal~l~~~l 1188 (1335)
++|++|.+++.+.+|.+.+..+.....+.+.......+..+... ..+...+.....+++++.+...+.+.......+
T Consensus 952 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l 1031 (1321)
T 4f4c_A 952 AREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTL 1031 (1321)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTTTSST
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 41488999999999999999999999999999999999999999999875788753765421478999999998778899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCC-CCCCCCEEEEECCCEE
Q ss_conf 999999999997767999999841699999876668999999996415999988998379998-8422612786287599
Q 000713 1189 VMSIQNQCTLANYIISVERLNQYMHVPSEAPEVVEDNRPPPNWPVVGKVDICDLQIRYRPDSP-LVLKGISCTFEGGHKI 1267 (1335)
Q Consensus 1189 ~~~v~~~~~~e~~~~SvERi~~y~~~p~E~~~~~~~~~p~~~WP~~G~I~f~nv~~rYr~~~p-~VLk~is~~I~~GeKV 1267 (1335)
.++.+.+.++++.+.+++|+.++.+.++|.+ +...+++.||..|.|+|+||+|+|+.+.+ +||||+||+|+|||||
T Consensus 1032 ~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~---~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~v 1108 (1321)
T 4f4c_A 1032 GFATSYFPEYAKATFAGGIIFGMLRKISKID---SLSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTL 1108 (1321)
T ss_dssp TGGGGHHHHHHHHHHHHHHHHHHHHCCCSSC---TTCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEE
T ss_conf 9999999999999999998999860766577---7667787888888189998798579999882124516998898999
Q ss_pred EEECCCCCCHHHHHHHHHHCCCCCCCEEEECCEECCC------CCCCCEEECCCCCCCCCHHHH
Q ss_conf 9995899868999999940348998759997941587------689935605443233437864
Q 000713 1268 GIVGRTGSGKTTLRGALFRLIEPARGKILVDGKLAEY------DEPMELMKREGSLFGQLVKEY 1325 (1335)
Q Consensus 1268 GIVGRTGSGKSTL~~aLfRl~e~~~G~I~IDGvDI~~------~~~~~LV~Qep~LFsgTIre~ 1325 (1335)
|||||||||||||+++|+|+|||++|+|.|||+||+. |+++++|||||+||+||||||
T Consensus 1109 aIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreN 1172 (1321)
T 4f4c_A 1109 ALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAEN 1172 (1321)
T ss_dssp EEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHH
T ss_pred EEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHH
T ss_conf 9989999819999999956863899789999998654999999854599878997327239999
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1006.91 Aligned_cols=1007 Identities=17% Similarity=0.177 Sum_probs=727.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------C----------CHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998999999999999999999999999999999960178---------7----------436899999999999999999
Q 000713 306 ICHWRDIFMSGFFALIKVLTLSAGPLFLNAFILVAESKA---------G----------FKYEGYLLAITLFLAKILESL 366 (1335)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~---------~----------~~~~g~~l~~~l~~~~~~~sl 366 (1335)
+..|..++++.++.++..++..+.|++++.+++.+.... . .......++..++...++..+
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (1284)
T 3g5u_A 44 WLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLI 123 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57999999999999999999999999999999998613444332222221111100244688999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999973895553279988999999999999988999-9999999999999999999
Q 000713 367 SQRQRYFRSRLIGLKVRSLLTAAIYRKQLRLSNAARLMHSGGEIMNYVTVDAYRIGEFPF-WFHQIWTTSVQLCIALIIL 445 (1335)
Q Consensus 367 ~~~~~~~~~~~~g~riR~~l~~~Iy~K~L~ls~~~~~~~s~GeIvNlmsvD~~ri~~~~~-~~~~lw~~plqi~ial~lL 445 (1335)
+.....+...+.+.++-..+...+|+|.++++..-.+.+++|+++|.++.|++.+.+... .+..+....+.++.+++++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~ 203 (1284)
T 3g5u_A 124 VAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIG 203 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999998699899756887789999998899999999999999999999999999999
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 889779-9999999999999999999999999999999999999999999971279999846179999999999999999
Q 000713 446 FHAVGL-ATIAALVVITITVLCNTPLAKLQHKFQTKLMVAQDERLKACSEAFVNMKVLKLYAWETHFKNAIEILRNVEYK 524 (1335)
Q Consensus 446 ~~~lG~-s~l~gl~v~il~~~~~~~l~~~~~~~q~~~m~~~D~Ri~~~sEiL~~IrvIKl~aWE~~f~~~I~~~R~~El~ 524 (1335)
+. +.| .+++.+++++++..+..++.+...+..++.++..++......|.++|||+||.|++|+.+.++..+.-++-.+
T Consensus 204 ~~-~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~~~~~~~ 282 (1284)
T 3g5u_A 204 FT-RGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKR 282 (1284)
T ss_dssp HH-TTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 99-98999999999999999999999999999999999999999999999997879999846539999999999999999
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999996898--68999999999999998337644888999999999999999999999999999999999999
Q 000713 525 WLSAVQLRKAYNGFLF--WSSPVLVSTATFGACYFLNVPLYASNVFTFVATLRLVQDPIRIIPDVIGVFIQANVAFSRIV 602 (1335)
Q Consensus 525 ~l~~~~~~~a~~~~~~--~~~p~lv~~~tF~~~~l~g~~Lta~~vFt~lalf~~L~~pl~~lp~~i~~~~qa~vS~~RI~ 602 (1335)
...+.....+....+. ......+..++++.+....+.++++.+++++..+.....|+..+...+..+.++..+.+|+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~ 362 (1284)
T 3g5u_A 283 LGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVF 362 (1284)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999929988999999999999999999999999999999999999999
Q ss_pred HHHCCCC-CCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCC
Q ss_conf 9863997-872000125887787641999856998269999995000026850992999986798878999999856898
Q 000713 603 NFLEAPE-LQSMNIRQKGNIENVNRAISIKSASFSWEESSSKPTMRNISLEVRPGQKVAICGEVGSGKSTLLAAILGEVP 681 (1335)
Q Consensus 603 ~FL~~~e-~~~~~~~~~~~~~~~~~~I~i~~~~f~w~~~~~~~~L~~i~l~i~~G~~v~IvG~~GsGKStLl~~ilGe~~ 681 (1335)
++++.++ .++......+. ...++.|+++|++|+|+.+++.++|+|+||++++|+.++|+||+|||||||+++|+|+++
T Consensus 363 ~~l~~~~~~~~~~~~~~~~-~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl~~ll~g~~~ 441 (1284)
T 3g5u_A 363 KIIDNKPSIDSFSKSGHKP-DNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYD 441 (1284)
T ss_dssp HTTSCCCCCSSCCSSCCCC-TTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHHHHHHTTTSSC
T ss_pred HHHCCCCCCCCCCCCCCCC-CCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 9972898677666567777-777771899998997699998710125458975998899989999979999999807889
Q ss_pred CCCCEEEECCE-------------EEEEECCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCC
Q ss_conf 99837999293-------------999915776888888898413999-9937899999981337888409999985226
Q 000713 682 HTQGTIQVYGK-------------TAYVSQTAWIQTGSIRENILFGSP-MDSHQYQETLERCSLIKDLELLPYGDNTEIG 747 (1335)
Q Consensus 682 ~~~G~v~v~g~-------------iayv~Q~pwi~~~TireNIlfg~~-~~~~~y~~vl~~c~L~~dl~~lp~Gd~T~IG 747 (1335)
|.+|+|.++|. ++||+|+||++++||+|||.||.+ .+++++.++++.|++.++++.+|+|++|.+|
T Consensus 442 ~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~ 521 (1284)
T 3g5u_A 442 PLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQFDTLVG 521 (1284)
T ss_dssp CSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHSTTGGGCCCS
T ss_pred CCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCC
T ss_conf 99738999999877579999986548986887537766999974579899999999999982969999746563345014
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECC
Q ss_conf 88887797999999999998149979998288888899989999999999973997899981688861237969999499
Q 000713 748 ERGVNLSGGQKQRIQLARALYQDADIYLLDDPFSAVDAHTASSLFNDYVMEALSGKVVLLVTHQVDFLPAFDSVLLMSDG 827 (1335)
Q Consensus 748 e~G~~LSGGQkqRi~LARAly~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kTvilvTH~~~~l~~~D~iivl~~G 827 (1335)
|+|.+|||||||||+||||++++|+|++||||+|+||+++.+.+. +++....+++|+|+|||+++.+..||+|++|++|
T Consensus 522 ~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~-~~l~~~~~~~t~i~itH~l~~i~~~d~i~vl~~G 600 (1284)
T 3g5u_A 522 ERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQ-AALDKAREGRTTIVIAHRLSTVRNADVIAGFDGG 600 (1284)
T ss_dssp SSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHH-HHHHHHHTTSEEEEECSCHHHHTTCSEEEECSSS
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECC
T ss_conf 787865999999999999995299989997987777999999999-9999973999899994077899749989999899
Q ss_pred EEEEECCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC----CCCCCCCCC-CCCC----CCCCCCC--CCCCCCCCCHHH
Q ss_conf 6988138379971545899999983421043222236----888688998-2111----2344421--000123320124
Q 000713 828 EILRAAPYHQLLASSKEFQELVSAHKETAGSERLAEV----TPSQKSGMP-AKEI----KKGHVEK--QFEVSKGDQLIK 896 (1335)
Q Consensus 828 ~i~~~G~~~eL~~~~~~f~~l~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~----~~~~~~~--~~~~~~~~~l~~ 896 (1335)
+|++.|+++|+++.++.|.++...+..........+. ......... .... ....... ............
T Consensus 601 ~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (1284)
T 3g5u_A 601 VIVEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRSTRKSICGPHDQDRKLST 680 (1284)
T ss_dssp CCCCEECHHHHHHTTSHHHHHHHHTC------------------------------------------------------
T ss_pred EEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 99997889999867877999999743002211133333322222344333333332000345433344564223321102
Q ss_pred HHHHH--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHH-CCCCCC----CCCHHHHHHHHHHH
Q ss_conf 55632--18755178999998202359999999999999999998----757661-344578----76503789999999
Q 000713 897 QEERE--TGDIGLKPYIQYLNQNKGFLFFSIASLSHLTFVIGQIL----QNSWLA-ANVENP----NVSTLRLIVVYLLI 965 (1335)
Q Consensus 897 ~E~r~--~G~v~~~vy~~Y~~~~~g~~~~~~~~~~~~~~~~~~~~----s~~wl~-w~~~~~----~~~~~~~~~vy~~l 965 (1335)
+|+.+ ....++..++.|.+........ .+++.++..+.... ...|+. |....+ ......+..+|.++
T Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 758 (1284)
T 3g5u_A 681 KEALDEDVPPASFWRILKLNSTEWPYFVV--GIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLIL 758 (1284)
T ss_dssp ---CCCCCSCCCTTHHHHHHHHTCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCHHHHHHHHHHCCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 45553136625899999984515799999--9999999999999999999999999855685033677999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999999999998708754101--46800358787168668883349999999999999
Q 000713 966 GFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYD--STPLGRILSRVSSDLSIVDLDIPFSLIFAVGATTN 1043 (1335)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~~~as~~lh~~ll~~il~apmsFFD--~tp~GrIlnRfS~D~~~iD~~lp~~~~~~~~~~~~ 1043 (1335)
++...++.+++.+.+...+.+.+.++|.+++++++++|++||| .+|+|+|+||+++|+..+|..++..+..++...+.
T Consensus 759 ~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~ 838 (1284)
T 3g5u_A 759 GIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIAN 838 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999998399888757899889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH--HHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHCCCHHHHH
Q ss_conf 99999999999789999---9999999999999999976--899999870000258999999870638887306189999
Q 000713 1044 ACSNLGVLAVVTWQVLF---VSIPVIFLAIRLQRYYFVT--AKELMRLNGTTKSLVANHLAESIAGAMTIRAFEEEDRFF 1118 (1335)
Q Consensus 1044 ~~~~i~vi~~~~p~~~~---~~ipl~~~~~~~~~~y~~t--srel~Rl~~~~rspi~~~f~Etl~G~~tIRAf~~~~~f~ 1118 (1335)
+++.+++++...|.+.+ +.+|+++++.+++.++... .+..+++ +....++.|+++|+.|||+|+.|++|.
T Consensus 839 ~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~e~l~gi~ti~a~~~e~~~~ 913 (1284)
T 3g5u_A 839 LGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKEL-----EGSGKIATEAIENFRTVVSLTREQKFE 913 (1284)
T ss_dssp HHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHTTCTTTTTCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 999999999996999999999999999999999999999999999999-----999999999998899999846599999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999885104617989999899999997999999999999----98745998768779999999999999999999999
Q 000713 1119 AKNLDLIDTNASPFFHSFAANEWLIQRLETLSATVISSAAF----CMVLLPPGTFTPGFIGMALSYGLSLNSSLVMSIQN 1194 (1335)
Q Consensus 1119 ~~~~~~ld~~~~~~~~~~~~~~Wl~~rl~~l~~~~~~~~a~----~~v~~~~~~~~~~~~Glalsyal~l~~~l~~~v~~ 1194 (1335)
+++.+..+...+... ...+|.+....+...+..+..+. .......+.++.+.+...+.+.......+..+...
T Consensus 914 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1284)
T 3g5u_A 914 TMYAQSLQIPYRNAM---KKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSF 990 (1284)
T ss_dssp HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999---99999999999999999999999999999999909806999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCCCCCCEEEEECCCEEEEECCC
Q ss_conf 9999977679999998416999998766689999999964159999889983799-988422612786287599999589
Q 000713 1195 QCTLANYIISVERLNQYMHVPSEAPEVVEDNRPPPNWPVVGKVDICDLQIRYRPD-SPLVLKGISCTFEGGHKIGIVGRT 1273 (1335)
Q Consensus 1195 ~~~~e~~~~SvERi~~y~~~p~E~~~~~~~~~p~~~WP~~G~I~f~nv~~rYr~~-~p~VLk~is~~I~~GeKVGIVGRT 1273 (1335)
..+....+.+++|+.++.+.++|.+...+ .+.+.||..|.|+|+||+++|+.+ ..++|+|+||+|++||++||||+|
T Consensus 991 ~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~s 1068 (1284)
T 3g5u_A 991 APDYAKATVSASHIIRIIEKTPEIDSYST--QGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSS 1068 (1284)
T ss_dssp SCCSTHHHHHHHHHHHHHHSCCSSSSCCS--SCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCC
T ss_conf 99999999999999999838876666555--6654567778579999899779999870020305997699889998899
Q ss_pred CCCHHHHHHHHHHCCCCCCCEEEECCEECCC------CCCCCEEECCCCCCCCCHHHHHH
Q ss_conf 9868999999940348998759997941587------68993560544323343786488
Q 000713 1274 GSGKTTLRGALFRLIEPARGKILVDGKLAEY------DEPMELMKREGSLFGQLVKEYWS 1327 (1335)
Q Consensus 1274 GSGKSTL~~aLfRl~e~~~G~I~IDGvDI~~------~~~~~LV~Qep~LFsgTIre~~~ 1327 (1335)
|||||||+++|+|+++|++|+|.|||+|++. +..+++|||||.||++||+||-.
T Consensus 1069 GsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~ 1128 (1284)
T 3g5u_A 1069 GCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIA 1128 (1284)
T ss_dssp STTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHT
T ss_pred CCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHH
T ss_conf 997899999994686789977989999800078999970268987787406666999974
No 3
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=633.71 Aligned_cols=547 Identities=22% Similarity=0.285 Sum_probs=461.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-HH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999899999999999999999999999999999996017874-36-----899999999999999999999999999
Q 000713 302 RTILICHWRDIFMSGFFALIKVLTLSAGPLFLNAFILVAESKAGF-KY-----EGYLLAITLFLAKILESLSQRQRYFRS 375 (1335)
Q Consensus 302 ~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~-~~-----~g~~l~~~l~~~~~~~sl~~~~~~~~~ 375 (1335)
+...+.+++.++...++.++..++..+.|++++.+++.+...... .. ..+.+++++++..++..++.....+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (578)
T 4a82_A 6 LQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLA 85 (578)
T ss_dssp HHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99988999999999999999999999999999999999981687114677888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999973895553279988999999999999988999-9999999999999999999889779999
Q 000713 376 RLIGLKVRSLLTAAIYRKQLRLSNAARLMHSGGEIMNYVTVDAYRIGEFPF-WFHQIWTTSVQLCIALIILFHAVGLATI 454 (1335)
Q Consensus 376 ~~~g~riR~~l~~~Iy~K~L~ls~~~~~~~s~GeIvNlmsvD~~ri~~~~~-~~~~lw~~plqi~ial~lL~~~lG~s~l 454 (1335)
.+.+.++...+...+|+|.++++....+++++|+++|.++.|++++.++.. .++.+|..++.+++++++++..-.+.++
T Consensus 86 ~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l 165 (578)
T 4a82_A 86 QWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTL 165 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998789999768986999999999999999999999999999999999999999999699999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999712799998461799999999999999999999999999
Q 000713 455 AALVVITITVLCNTPLAKLQHKFQTKLMVAQDERLKACSEAFVNMKVLKLYAWETHFKNAIEILRNVEYKWLSAVQLRKA 534 (1335)
Q Consensus 455 ~gl~v~il~~~~~~~l~~~~~~~q~~~m~~~D~Ri~~~sEiL~~IrvIKl~aWE~~f~~~I~~~R~~El~~l~~~~~~~a 534 (1335)
++++++++..++...+.+...+.+++.++..+++.+.+.|.++|||+||.|+||+.+.++..+.++++.+...+.....+
T Consensus 166 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (578)
T 4a82_A 166 AALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRWNA 245 (578)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999824999998166499999999999999999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99689868999--9999999999983376448889999999999999999999999999999999999999863997872
Q 000713 535 YNGFLFWSSPV--LVSTATFGACYFLNVPLYASNVFTFVATLRLVQDPIRIIPDVIGVFIQANVAFSRIVNFLEAPELQS 612 (1335)
Q Consensus 535 ~~~~~~~~~p~--lv~~~tF~~~~l~g~~Lta~~vFt~lalf~~L~~pl~~lp~~i~~~~qa~vS~~RI~~FL~~~e~~~ 612 (1335)
....+...... .+.++.++.+....+.++++.+++.+.++..+..|+..++..+..+.++.+|++|+.++++.++..+
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 325 (578)
T 4a82_A 246 YSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIK 325 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999998599589999999999999999999999999999999999999999976897666
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-
Q ss_conf 0001258877876419998569982699999950000268509929999867988789999998568989983799929-
Q 000713 613 MNIRQKGNIENVNRAISIKSASFSWEESSSKPTMRNISLEVRPGQKVAICGEVGSGKSTLLAAILGEVPHTQGTIQVYG- 691 (1335)
Q Consensus 613 ~~~~~~~~~~~~~~~I~i~~~~f~w~~~~~~~~L~~i~l~i~~G~~v~IvG~~GsGKStLl~~ilGe~~~~~G~v~v~g- 691 (1335)
+.....+... .++.|+++|++|+|+.. ++++|+|+||++++|+.++|+||+|||||||+++|+|+++|.+|+|.++|
T Consensus 326 ~~~~~~~~~~-~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~ 403 (578)
T 4a82_A 326 NGVGAQPIEI-KQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGH 403 (578)
T ss_dssp CCTTCCCCCC-CSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEEEETTE
T ss_pred CCCCCCCCCC-CCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCE
T ss_conf 7877666677-78807999999975899-974134337998799999998999985999999984678899967999999
Q ss_pred ------------EEEEEECCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHH
Q ss_conf ------------3999915776888888898413999-993789999998133788840999998522688887797999
Q 000713 692 ------------KTAYVSQTAWIQTGSIRENILFGSP-MDSHQYQETLERCSLIKDLELLPYGDNTEIGERGVNLSGGQK 758 (1335)
Q Consensus 692 ------------~iayv~Q~pwi~~~TireNIlfg~~-~~~~~y~~vl~~c~L~~dl~~lp~Gd~T~IGe~G~~LSGGQk 758 (1335)
+++|++|+||++++|++|||.+|.+ .++++..++++.+++.++++.+|+|++|.+||+|.+||||||
T Consensus 404 ~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~LSgGq~ 483 (578)
T 4a82_A 404 NIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQK 483 (578)
T ss_dssp EGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTSCHHHH
T ss_pred EHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCCCHHHH
T ss_conf 84427899996006899289834764599998527999889999999988095999975733010253068896799999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999814997999828888889998999999999997399789998168886123796999949969881383799
Q 000713 759 QRIQLARALYQDADIYLLDDPFSAVDAHTASSLFNDYVMEALSGKVVLLVTHQVDFLPAFDSVLLMSDGEILRAAPYHQL 838 (1335)
Q Consensus 759 qRi~LARAly~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kTvilvTH~~~~l~~~D~iivl~~G~i~~~G~~~eL 838 (1335)
||++||||++++|++++||||+|+||+++.+.+. +++....+++|+|++||+++.+..||+|++|++|++++.|+++|+
T Consensus 484 Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~-~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~el 562 (578)
T 4a82_A 484 QRLSIARIFLNNPPILILDEATSALDLESESIIQ-EALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHREL 562 (578)
T ss_dssp HHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHH-HHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHH
T ss_conf 9999999997499999997865457999999999-999998089979998317899971998999989989998889999
Q ss_pred HHCCHHHHHHHHH
Q ss_conf 7154589999998
Q 000713 839 LASSKEFQELVSA 851 (1335)
Q Consensus 839 ~~~~~~f~~l~~~ 851 (1335)
++.++.|.++...
T Consensus 563 ~~~~~~~~~~~~~ 575 (578)
T 4a82_A 563 IAKQGAYEHLYSI 575 (578)
T ss_dssp HHTTSHHHHHHTT
T ss_pred HHCCCHHHHHHHH
T ss_conf 8588389999985
No 4
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=622.99 Aligned_cols=543 Identities=21% Similarity=0.266 Sum_probs=460.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99989999999999999999999999999999999601787436899999999999999999999999999999999999
Q 000713 305 LICHWRDIFMSGFFALIKVLTLSAGPLFLNAFILVAESKAGFKYEGYLLAITLFLAKILESLSQRQRYFRSRLIGLKVRS 384 (1335)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~sl~~~~~~~~~~~~g~riR~ 384 (1335)
++.+++.++...++.++..++..+.|++++.+++.+...... ..-..++..+++..++..++.....+...+.+.++..
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (598)
T 3qf4_B 32 LRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRF-DLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDVVF 110 (598)
T ss_dssp TGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCG-GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999736888-9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999973895553279988999999999999988999-9999999999999999999889779999999999999
Q 000713 385 LLTAAIYRKQLRLSNAARLMHSGGEIMNYVTVDAYRIGEFPF-WFHQIWTTSVQLCIALIILFHAVGLATIAALVVITIT 463 (1335)
Q Consensus 385 ~l~~~Iy~K~L~ls~~~~~~~s~GeIvNlmsvD~~ri~~~~~-~~~~lw~~plqi~ial~lL~~~lG~s~l~gl~v~il~ 463 (1335)
.+...+|+|.++++....+++++|+++|.++.|++++.++.. .+..++..++.++.++++++..-.+.+++.++++++.
T Consensus 111 ~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~~~~l~ 190 (598)
T 3qf4_B 111 RLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLT 190 (598)
T ss_dssp HHHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999997799999768888999999999999999999999999999999999999999999899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999712799998461799999999999999999999999999996898689
Q 000713 464 VLCNTPLAKLQHKFQTKLMVAQDERLKACSEAFVNMKVLKLYAWETHFKNAIEILRNVEYKWLSAVQLRKAYNGFLFWSS 543 (1335)
Q Consensus 464 ~~~~~~l~~~~~~~q~~~m~~~D~Ri~~~sEiL~~IrvIKl~aWE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~~~~~ 543 (1335)
.++...+.+...+.+++..+..+++.+.+.|.++||++||.|+||+.+.+++.+.+++..+...+.....+....+....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (598)
T 3qf4_B 191 VLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMV 270 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999737999997487099999999999999999999999999999999999
Q ss_pred H--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 9--99999999999983376448889999999999999999999999999999999999999863997872000125887
Q 000713 544 P--VLVSTATFGACYFLNVPLYASNVFTFVATLRLVQDPIRIIPDVIGVFIQANVAFSRIVNFLEAPELQSMNIRQKGNI 621 (1335)
Q Consensus 544 p--~lv~~~tF~~~~l~g~~Lta~~vFt~lalf~~L~~pl~~lp~~i~~~~qa~vS~~RI~~FL~~~e~~~~~~~~~~~~ 621 (1335)
. ..+.++.++.+....+.++++.+++.+.+...+..|+..++..+..+.++.+|.+|+.++++.++..+... ..+.
T Consensus 271 ~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~-~~~~- 348 (598)
T 3qf4_B 271 NNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDDPD-AVEL- 348 (598)
T ss_dssp HHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCSS-CCCC-
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCC-
T ss_conf 99999999999999998599789999999999999999999999999999999999999999976887777777-7777-
Q ss_pred CCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC----------
Q ss_conf 7876419998569982699999950000268509929999867988789999998568989983799929----------
Q 000713 622 ENVNRAISIKSASFSWEESSSKPTMRNISLEVRPGQKVAICGEVGSGKSTLLAAILGEVPHTQGTIQVYG---------- 691 (1335)
Q Consensus 622 ~~~~~~I~i~~~~f~w~~~~~~~~L~~i~l~i~~G~~v~IvG~~GsGKStLl~~ilGe~~~~~G~v~v~g---------- 691 (1335)
.+..+.|+++|++|+|+++ +++|+|+||++++|+.++|+||+|||||||+++|+|.++|.+|+|.++|
T Consensus 349 ~~~~~~i~~~~v~~~y~~~--~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~ 426 (598)
T 3qf4_B 349 REVRGEIEFKNVWFSYDKK--KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSS 426 (598)
T ss_dssp CSCCCCEEEEEEECCSSSS--SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTEEGGGSCHHH
T ss_pred CCCCCEEEEEEEEEECCCC--CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHH
T ss_conf 7777718999989977999--86012227998699889998999996999999994585799808999999830188999
Q ss_pred ---EEEEEECCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf ---3999915776888888898413999-993789999998133788840999998522688887797999999999998
Q 000713 692 ---KTAYVSQTAWIQTGSIRENILFGSP-MDSHQYQETLERCSLIKDLELLPYGDNTEIGERGVNLSGGQKQRIQLARAL 767 (1335)
Q Consensus 692 ---~iayv~Q~pwi~~~TireNIlfg~~-~~~~~y~~vl~~c~L~~dl~~lp~Gd~T~IGe~G~~LSGGQkqRi~LARAl 767 (1335)
+++|++|+|+++++|++|||.+|.+ .++++..++++.+.++++++.+|+|++|.+||+|.+||||||||++||||+
T Consensus 427 ~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~Qrv~iAral 506 (598)
T 3qf4_B 427 LRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAF 506 (598)
T ss_dssp HHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 98410899079823246399997447999999999999999697888974645323642278898799999999999999
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHHHHHCCHHHHH
Q ss_conf 14997999828888889998999999999997399789998168886123796999949969881383799715458999
Q 000713 768 YQDADIYLLDDPFSAVDAHTASSLFNDYVMEALSGKVVLLVTHQVDFLPAFDSVLLMSDGEILRAAPYHQLLASSKEFQE 847 (1335)
Q Consensus 768 y~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kTvilvTH~~~~l~~~D~iivl~~G~i~~~G~~~eL~~~~~~f~~ 847 (1335)
+++|++++||||+|+||+++.+.+.+ .+....+++|+|++||+++.+..||+|++|++|++++.|+++|+++.++.|.+
T Consensus 507 ~~~p~illlDEpts~LD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 585 (598)
T 3qf4_B 507 LANPKILILDEATSNVDTKTEKSIQA-AMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFYYE 585 (598)
T ss_dssp HTCCSEEEECCCCTTCCHHHHHHHHH-HHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHHHHHTTCHHHH
T ss_pred HCCCCEEEEECCCCCCCHHHHHHHHH-HHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHH
T ss_conf 64999999989766799999999999-99998089989999427789971998999989999987789999867877999
Q ss_pred HHHHHH
Q ss_conf 999834
Q 000713 848 LVSAHK 853 (1335)
Q Consensus 848 l~~~~~ 853 (1335)
+...+.
T Consensus 586 ~~~~~~ 591 (598)
T 3qf4_B 586 LFTSQY 591 (598)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999976
No 5
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=620.41 Aligned_cols=543 Identities=20% Similarity=0.278 Sum_probs=414.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8999999999999999999999999999999960178-743689999999999999999999999999999999999999
Q 000713 308 HWRDIFMSGFFALIKVLTLSAGPLFLNAFILVAESKA-GFKYEGYLLAITLFLAKILESLSQRQRYFRSRLIGLKVRSLL 386 (1335)
Q Consensus 308 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~-~~~~~g~~l~~~l~~~~~~~sl~~~~~~~~~~~~g~riR~~l 386 (1335)
+|+.++++.+...+........++++...++...... .....+..++..+++..++..++.....+...+.+.++...+
T Consensus 750 ~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~l 829 (1321)
T 4f4c_A 750 HALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDL 829 (1321)
T ss_dssp GHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999999999999999987517934556678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCHHHH--CCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999973895553--27998899999999999998899-99999999999999999999889779999999999999
Q 000713 387 TAAIYRKQLRLSNAAR--LMHSGGEIMNYVTVDAYRIGEFP-FWFHQIWTTSVQLCIALIILFHAVGLATIAALVVITIT 463 (1335)
Q Consensus 387 ~~~Iy~K~L~ls~~~~--~~~s~GeIvNlmsvD~~ri~~~~-~~~~~lw~~plqi~ial~lL~~~lG~s~l~gl~v~il~ 463 (1335)
...+|+|.++.+-.-. .++++|+++|.++.|++.+.+.. ..+..+....+.++.++++++..-.+.+++.+++++++
T Consensus 830 r~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~ 909 (1321)
T 4f4c_A 830 RNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIV 909 (1321)
T ss_dssp HHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHH
T ss_conf 99998887349933321678884888850250599999999999999999865377770221378689999999988899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999712799998461799999999999999999999999999996898689
Q 000713 464 VLCNTPLAKLQHKFQTKLMVAQDERLKACSEAFVNMKVLKLYAWETHFKNAIEILRNVEYKWLSAVQLRKAYNGFLFWSS 543 (1335)
Q Consensus 464 ~~~~~~l~~~~~~~q~~~m~~~D~Ri~~~sEiL~~IrvIKl~aWE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~~~~~ 543 (1335)
........+...+.+.+..+...+......|.++|+++||.|++|+.|.++..+.-+...+...+..........+....
T Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1321)
T 4f4c_A 910 AFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSV 989 (1321)
T ss_dssp HHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999988898899999962798886141488999999999999999999999999999999999
Q ss_pred HHHH--HHHHHHHHHHHCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCC
Q ss_conf 9999--99999999983376--44888999999999999999999999999999999999999986399-7872000125
Q 000713 544 PVLV--STATFGACYFLNVP--LYASNVFTFVATLRLVQDPIRIIPDVIGVFIQANVAFSRIVNFLEAP-ELQSMNIRQK 618 (1335)
Q Consensus 544 p~lv--~~~tF~~~~l~g~~--Lta~~vFt~lalf~~L~~pl~~lp~~i~~~~qa~vS~~RI~~FL~~~-e~~~~~~~~~ 618 (1335)
..+. .++.++.+....+. +.+..+|..+..+.....|+..+......+.++..|.+|+.++++.+ |.++......
T Consensus 990 ~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~ 1069 (1321)
T 4f4c_A 990 LYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLSLAGE 1069 (1321)
T ss_dssp HHHHHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTTCCCSB
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 99999999987578875376542147899999999877889999999999999999999989998607665777667787
Q ss_pred CCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-------
Q ss_conf 8877876419998569982699999950000268509929999867988789999998568989983799929-------
Q 000713 619 GNIENVNRAISIKSASFSWEESSSKPTMRNISLEVRPGQKVAICGEVGSGKSTLLAAILGEVPHTQGTIQVYG------- 691 (1335)
Q Consensus 619 ~~~~~~~~~I~i~~~~f~w~~~~~~~~L~~i~l~i~~G~~v~IvG~~GsGKStLl~~ilGe~~~~~G~v~v~g------- 691 (1335)
+ .+..+.|+++|++|+|+.+++.++|+|+||+|++|+++||||++|||||||+++++|.++|.+|+|.++|
T Consensus 1070 ~--~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~ 1147 (1321)
T 4f4c_A 1070 K--KKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLN 1147 (1321)
T ss_dssp C--CCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBC
T ss_pred C--CCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCC
T ss_conf 8--88888189998798579999882124516998898999998999981999999995686389978999999865499
Q ss_pred ------EEEEEECCCCCCCCCHHHHHCCCC---CCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf ------399991577688888889841399---99937899999981337888409999985226888877979999999
Q 000713 692 ------KTAYVSQTAWIQTGSIRENILFGS---PMDSHQYQETLERCSLIKDLELLPYGDNTEIGERGVNLSGGQKQRIQ 762 (1335)
Q Consensus 692 ------~iayv~Q~pwi~~~TireNIlfg~---~~~~~~y~~vl~~c~L~~dl~~lp~Gd~T~IGe~G~~LSGGQkqRi~ 762 (1335)
+++||||+|.+++|||||||.||. ..++++..++++.+++++.++.+|+|.+|.|||+|.||||||||||+
T Consensus 1148 ~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQria 1227 (1321)
T 4f4c_A 1148 PEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIA 1227 (1321)
T ss_dssp HHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHH
T ss_pred HHHHHHHEEEECCCCEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHH
T ss_conf 99998545998789973272399997454999999999999999982984999717678999823889156999999999
Q ss_pred HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHHHHHCC
Q ss_conf 99998149979998288888899989999999999973997899981688861237969999499698813837997154
Q 000713 763 LARALYQDADIYLLDDPFSAVDAHTASSLFNDYVMEALSGKVVLLVTHQVDFLPAFDSVLLMSDGEILRAAPYHQLLASS 842 (1335)
Q Consensus 763 LARAly~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kTvilvTH~~~~l~~~D~iivl~~G~i~~~G~~~eL~~~~ 842 (1335)
||||+++||+|++||||||+||+++.+.|. +.+....+++|+|+|+|+++.+..||+|+||++|+|+|.|+|+||++.+
T Consensus 1228 iARAllr~~~ILiLDEaTSaLD~~tE~~Iq-~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~~ 1306 (1321)
T 4f4c_A 1228 IARALVRNPKILLLDEATSALDTESEKVVQ-EALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSEK 1306 (1321)
T ss_dssp HHHHHHSCCSEEEEESCCCSTTSHHHHHHH-HHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHCC
T ss_pred HHHHHHHCCCEEEEECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHCC
T ss_conf 999997179989996811157899999999-9999973999899960689999969999999898999988889998498
Q ss_pred HHHHHHHHHHH
Q ss_conf 58999999834
Q 000713 843 KEFQELVSAHK 853 (1335)
Q Consensus 843 ~~f~~l~~~~~ 853 (1335)
+.|.++++.+.
T Consensus 1307 g~y~~L~~~Q~ 1317 (1321)
T 4f4c_A 1307 GAYYKLTQKQM 1317 (1321)
T ss_dssp -----------
T ss_pred CHHHHHHHHHH
T ss_conf 09999999998
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=618.41 Aligned_cols=549 Identities=18% Similarity=0.271 Sum_probs=443.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 47999999989999999999999999999999999999999601787436899999999999999999999999999999
Q 000713 299 SILRTILICHWRDIFMSGFFALIKVLTLSAGPLFLNAFILVAESKAGFKYEGYLLAITLFLAKILESLSQRQRYFRSRLI 378 (1335)
Q Consensus 299 sl~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~sl~~~~~~~~~~~~ 378 (1335)
..++..++.+|+.+++..++.++..++..+.|++++.+++....... ....+.++..+++..++..++.....+...+.
T Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (587)
T 3qf4_A 12 KTLARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGD-FSLVLKTGILMLIVALIGAVGGIGCTVFASYA 90 (587)
T ss_dssp CCGGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999873698-79999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999738955532799889999999999999889999-999999999999999999889779999999
Q 000713 379 GLKVRSLLTAAIYRKQLRLSNAARLMHSGGEIMNYVTVDAYRIGEFPFW-FHQIWTTSVQLCIALIILFHAVGLATIAAL 457 (1335)
Q Consensus 379 g~riR~~l~~~Iy~K~L~ls~~~~~~~s~GeIvNlmsvD~~ri~~~~~~-~~~lw~~plqi~ial~lL~~~lG~s~l~gl 457 (1335)
+.++...+...+|+|.++++....+++++|+++|.++.|++++.++... +..++..++.++.++++++..-...+++.+
T Consensus 91 ~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l 170 (587)
T 3qf4_A 91 SQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSSVLI 170 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999997889799765888999999999999999999999999999999999999999999899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHH----HHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999999999997127999984617999999999----9999999999999999
Q 000713 458 VVITITVLCNTPLAKLQHKFQTKLMVAQDERLKACSEAFVNMKVLKLYAWETHFKNAIEI----LRNVEYKWLSAVQLRK 533 (1335)
Q Consensus 458 ~v~il~~~~~~~l~~~~~~~q~~~m~~~D~Ri~~~sEiL~~IrvIKl~aWE~~f~~~I~~----~R~~El~~l~~~~~~~ 533 (1335)
++++++.++..++.+...+..++.++..+++.+.+.|.++|||+||.|+||+.+.++..+ .|+.+.+..+......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (587)
T 3qf4_A 171 FLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIVFAL 250 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999855999998621499999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99968986899999999999999833764488899999999999999999999999999999999999998639978720
Q 000713 534 AYNGFLFWSSPVLVSTATFGACYFLNVPLYASNVFTFVATLRLVQDPIRIIPDVIGVFIQANVAFSRIVNFLEAPELQSM 613 (1335)
Q Consensus 534 a~~~~~~~~~p~lv~~~tF~~~~l~g~~Lta~~vFt~lalf~~L~~pl~~lp~~i~~~~qa~vS~~RI~~FL~~~e~~~~ 613 (1335)
.... +......+.++.++.+....+.++++.+++.+.++..+..|+..++..+..+.++.+|.+|+.++++.++..++
T Consensus 251 ~~~~--~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 328 (587)
T 3qf4_A 251 PLFI--FIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIEE 328 (587)
T ss_dssp HHHH--HHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCC
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 9999--99999999999999999984993899999999999999999999999999999999999999999768976578
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC--
Q ss_conf 001258877876419998569982699999950000268509929999867988789999998568989983799929--
Q 000713 614 NIRQKGNIENVNRAISIKSASFSWEESSSKPTMRNISLEVRPGQKVAICGEVGSGKSTLLAAILGEVPHTQGTIQVYG-- 691 (1335)
Q Consensus 614 ~~~~~~~~~~~~~~I~i~~~~f~w~~~~~~~~L~~i~l~i~~G~~v~IvG~~GsGKStLl~~ilGe~~~~~G~v~v~g-- 691 (1335)
.....+... .+..|+++|++|+|+.+. +++|+|+||++++||.++|+||+|||||||+++|+|.++|.+|+|.++|
T Consensus 329 ~~~~~~~~~-~~~~i~~~~v~~~y~~~~-~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~~ 406 (587)
T 3qf4_A 329 ADNALALPN-VEGSVSFENVEFRYFENT-DPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELD 406 (587)
T ss_dssp CTTCBCCSC-CCCCEEEEEEEECSSSSS-CCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSSB
T ss_pred CCCCCCCCC-CCCCEEEEEEEEECCCCC-CCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
T ss_conf 877656688-888079978899848999-764211179986998899989999979999999927866998679899998
Q ss_pred -----------EEEEEECCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf -----------3999915776888888898413999-9937899999981337888409999985226888877979999
Q 000713 692 -----------KTAYVSQTAWIQTGSIRENILFGSP-MDSHQYQETLERCSLIKDLELLPYGDNTEIGERGVNLSGGQKQ 759 (1335)
Q Consensus 692 -----------~iayv~Q~pwi~~~TireNIlfg~~-~~~~~y~~vl~~c~L~~dl~~lp~Gd~T~IGe~G~~LSGGQkq 759 (1335)
+++||||+|+++++|++|||.+|.+ .++++..++++.+++.++++.+|+|++|.+||+|.+|||||||
T Consensus 407 i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGqrQ 486 (587)
T 3qf4_A 407 VRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQKQ 486 (587)
T ss_dssp GGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHHHH
T ss_pred CCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHHHH
T ss_conf 34078999984138977898676755999985248899999999999996849999756531212751898992999999
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999998149979998288888899989999999999973997899981688861237969999499698813837997
Q 000713 760 RIQLARALYQDADIYLLDDPFSAVDAHTASSLFNDYVMEALSGKVVLLVTHQVDFLPAFDSVLLMSDGEILRAAPYHQLL 839 (1335)
Q Consensus 760 Ri~LARAly~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kTvilvTH~~~~l~~~D~iivl~~G~i~~~G~~~eL~ 839 (1335)
|++||||++++|++++||||+|+||+++.+++.+ .+....+++|+|+|||+++.+..||+|++|++|++++.|+++|++
T Consensus 487 rv~lARal~~~p~illlDEpts~LD~~~~~~i~~-~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el~ 565 (587)
T 3qf4_A 487 RLSIARALVKKPKVLILDDCTSSVDPITEKRILD-GLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKELL 565 (587)
T ss_dssp HHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHH-HHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH-HHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHH
T ss_conf 9999999972999999979754479999999999-999867999899982276889819989999899899978899998
Q ss_pred HCCHHHHHHHHHHH
Q ss_conf 15458999999834
Q 000713 840 ASSKEFQELVSAHK 853 (1335)
Q Consensus 840 ~~~~~f~~l~~~~~ 853 (1335)
+.++.|.++...+.
T Consensus 566 ~~~~~~~~~~~~~~ 579 (587)
T 3qf4_A 566 EHCKPYREIYESQF 579 (587)
T ss_dssp HHCHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHHH
T ss_conf 67839999999984
No 7
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=596.94 Aligned_cols=542 Identities=18% Similarity=0.239 Sum_probs=449.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999899999999999999999999999999999996017874368999999999999999999999999999999999
Q 000713 303 TILICHWRDIFMSGFFALIKVLTLSAGPLFLNAFILVAESKAGFKYEGYLLAITLFLAKILESLSQRQRYFRSRLIGLKV 382 (1335)
Q Consensus 303 al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~sl~~~~~~~~~~~~g~ri 382 (1335)
...+.+++.++...++.++..++..+.|++++.+++.+..... ....+.++..+++..++..++.....+...+.+.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (582)
T 3b60_A 18 PTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTD-RSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKV 96 (582)
T ss_dssp HHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSTT-HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999998843686-579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999738955532799889999999999999889-9999999999999999999998897799999999999
Q 000713 383 RSLLTAAIYRKQLRLSNAARLMHSGGEIMNYVTVDAYRIGEF-PFWFHQIWTTSVQLCIALIILFHAVGLATIAALVVIT 461 (1335)
Q Consensus 383 R~~l~~~Iy~K~L~ls~~~~~~~s~GeIvNlmsvD~~ri~~~-~~~~~~lw~~plqi~ial~lL~~~lG~s~l~gl~v~i 461 (1335)
...+...+|+|.++++....+++++|+++|.++.|++++.++ ...+..++..++.+++++++++..-.+.+++.+++++
T Consensus 97 ~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~ 176 (582)
T 3b60_A 97 VMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVVLAP 176 (582)
T ss_dssp HHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999980999997889865899999987999999999999999999999999999999980999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999999999999712799998461799999999----999999999999999999996
Q 000713 462 ITVLCNTPLAKLQHKFQTKLMVAQDERLKACSEAFVNMKVLKLYAWETHFKNAIE----ILRNVEYKWLSAVQLRKAYNG 537 (1335)
Q Consensus 462 l~~~~~~~l~~~~~~~q~~~m~~~D~Ri~~~sEiL~~IrvIKl~aWE~~f~~~I~----~~R~~El~~l~~~~~~~a~~~ 537 (1335)
+...+...+.+...+..++..+..+++.+.+.|.++|+++||.|++|+.+.++.. +.++.+.+..+..........
T Consensus 177 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (582)
T 3b60_A 177 IVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQ 256 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999619999983768999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 89868999999999999998337644888999999999999999999999999999999999999986399787200012
Q 000713 538 FLFWSSPVLVSTATFGACYFLNVPLYASNVFTFVATLRLVQDPIRIIPDVIGVFIQANVAFSRIVNFLEAPELQSMNIRQ 617 (1335)
Q Consensus 538 ~~~~~~p~lv~~~tF~~~~l~g~~Lta~~vFt~lalf~~L~~pl~~lp~~i~~~~qa~vS~~RI~~FL~~~e~~~~~~~~ 617 (1335)
++..... +.++.++.+.+..+.++++.+++.+.++..+..|+..++..+..+.++.++++|+.++++.++..++..
T Consensus 257 ~~~~~~~--~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~-- 332 (582)
T 3b60_A 257 LIASLAL--AFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGK-- 332 (582)
T ss_dssp HHHHHHH--HHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCCCC--
T ss_pred HHHHHHH--HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--
T ss_conf 9999999--999999999998499989999999999999999999999999999999999999999975998766777--
Q ss_pred CCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC------
Q ss_conf 58877876419998569982699999950000268509929999867988789999998568989983799929------
Q 000713 618 KGNIENVNRAISIKSASFSWEESSSKPTMRNISLEVRPGQKVAICGEVGSGKSTLLAAILGEVPHTQGTIQVYG------ 691 (1335)
Q Consensus 618 ~~~~~~~~~~I~i~~~~f~w~~~~~~~~L~~i~l~i~~G~~v~IvG~~GsGKStLl~~ilGe~~~~~G~v~v~g------ 691 (1335)
.+... ....|+++|++|+|+.+ ++++|+|+||++++|+.++|+||+|||||||+++++|.++|.+|+|.++|
T Consensus 333 ~~~~~-~~~~i~~~~v~~~y~~~-~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~ 410 (582)
T 3b60_A 333 RVIDR-ATGDLEFRNVTFTYPGR-EVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREY 410 (582)
T ss_dssp BCCSC-CCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTEETTTB
T ss_pred CCCCC-CCCCEEEEEEEEECCCC-CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCEECCCC
T ss_conf 77778-88847999889973999-97441561599769998999899999899999998610689897697999982306
Q ss_pred -------EEEEEECCCCCCCCCHHHHHCCCC--CCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf -------399991577688888889841399--99937899999981337888409999985226888877979999999
Q 000713 692 -------KTAYVSQTAWIQTGSIRENILFGS--PMDSHQYQETLERCSLIKDLELLPYGDNTEIGERGVNLSGGQKQRIQ 762 (1335)
Q Consensus 692 -------~iayv~Q~pwi~~~TireNIlfg~--~~~~~~y~~vl~~c~L~~dl~~lp~Gd~T~IGe~G~~LSGGQkqRi~ 762 (1335)
.++|++|+|+++++|++|||.+|. ..++++.+++++.+++.+.++.+|+|++|.+||+|.+||||||||++
T Consensus 411 ~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LSgGq~qrl~ 490 (582)
T 3b60_A 411 TLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIA 490 (582)
T ss_dssp CHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHHHHHHH
T ss_pred CHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99999960808806874778789999854599998999999999984979999845041145114798878999999999
Q ss_pred HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHHHHHCC
Q ss_conf 99998149979998288888899989999999999973997899981688861237969999499698813837997154
Q 000713 763 LARALYQDADIYLLDDPFSAVDAHTASSLFNDYVMEALSGKVVLLVTHQVDFLPAFDSVLLMSDGEILRAAPYHQLLASS 842 (1335)
Q Consensus 763 LARAly~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kTvilvTH~~~~l~~~D~iivl~~G~i~~~G~~~eL~~~~ 842 (1335)
||||++++|++++||||+|+||+++.+.+.+ .+....+++|+|++||+++.+..||+|++|++|++++.|+++|+++.+
T Consensus 491 iAral~~~p~illlDEpts~LD~~~~~~i~~-~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 569 (582)
T 3b60_A 491 IARALLRDSPILILDEATSALDTESERAIQA-ALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQH 569 (582)
T ss_dssp HHHHHHHCCSEEEEETTTSSCCHHHHHHHHH-HHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECHHHHHHHT
T ss_pred HHHHHHHCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCC
T ss_conf 9999972899899978655579899999999-999996799799994547789859989999788898845899998769
Q ss_pred HHHHHHHHHH
Q ss_conf 5899999983
Q 000713 843 KEFQELVSAH 852 (1335)
Q Consensus 843 ~~f~~l~~~~ 852 (1335)
+.|.++.+.+
T Consensus 570 ~~~~~~~~~q 579 (582)
T 3b60_A 570 GVYAQLHKMQ 579 (582)
T ss_dssp SSHHHHHHHT
T ss_pred CHHHHHHHHH
T ss_conf 8899999975
No 8
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=596.00 Aligned_cols=542 Identities=19% Similarity=0.256 Sum_probs=452.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999899999999999999999999999999999996017874368999999999999999999999999999999999
Q 000713 303 TILICHWRDIFMSGFFALIKVLTLSAGPLFLNAFILVAESKAGFKYEGYLLAITLFLAKILESLSQRQRYFRSRLIGLKV 382 (1335)
Q Consensus 303 al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~sl~~~~~~~~~~~~g~ri 382 (1335)
...+.+++.++...++.++..++..+.|++++.+++.+..... ....+.++.++++..++..++.....+...+.+.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (582)
T 3b5x_A 18 TYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAE-SNFLRILPFMILGLMFVRGLSGFASSYCLSWVSGNV 96 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9988999999999999999999999999999999999864686-679999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999738955532799889999999999999889-9999999999999999999998897799999999999
Q 000713 383 RSLLTAAIYRKQLRLSNAARLMHSGGEIMNYVTVDAYRIGEF-PFWFHQIWTTSVQLCIALIILFHAVGLATIAALVVIT 461 (1335)
Q Consensus 383 R~~l~~~Iy~K~L~ls~~~~~~~s~GeIvNlmsvD~~ri~~~-~~~~~~lw~~plqi~ial~lL~~~lG~s~l~gl~v~i 461 (1335)
...+...+|+|.++++....+++++|+++|.++.|++++.++ ...+..++..++.+++++++++..-.+.+++.+++++
T Consensus 97 ~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~ 176 (582)
T 3b5x_A 97 VMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAP 176 (582)
T ss_pred HHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999986999997789878999999988999999999999999999999999999999982999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999999971279999846179999999----9999999999999999999996
Q 000713 462 ITVLCNTPLAKLQHKFQTKLMVAQDERLKACSEAFVNMKVLKLYAWETHFKNAI----EILRNVEYKWLSAVQLRKAYNG 537 (1335)
Q Consensus 462 l~~~~~~~l~~~~~~~q~~~m~~~D~Ri~~~sEiL~~IrvIKl~aWE~~f~~~I----~~~R~~El~~l~~~~~~~a~~~ 537 (1335)
+...+...+.+...+..++..+..+++.+.+.|.++|+|+||.|++|+.+.++. .+.++.+.+..+..........
T Consensus 177 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (582)
T 3b5x_A 177 VVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQ 256 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999519999970875999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 89868999999999999998337644888999999999999999999999999999999999999986399787200012
Q 000713 538 FLFWSSPVLVSTATFGACYFLNVPLYASNVFTFVATLRLVQDPIRIIPDVIGVFIQANVAFSRIVNFLEAPELQSMNIRQ 617 (1335)
Q Consensus 538 ~~~~~~p~lv~~~tF~~~~l~g~~Lta~~vFt~lalf~~L~~pl~~lp~~i~~~~qa~vS~~RI~~FL~~~e~~~~~~~~ 617 (1335)
++..... +.++.++.+.+..+.++++.+++.+.++..+..|+..++..+..+.++.++++|+.++++.++..++..
T Consensus 257 ~~~~~~~--~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~-- 332 (582)
T 3b5x_A 257 MIASLAL--FAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERDNGK-- 332 (582)
T ss_pred HHHHHHH--HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--
T ss_conf 9999999--999999999998599889999999999999999999999999999999999999999975897677777--
Q ss_pred CCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC------
Q ss_conf 58877876419998569982699999950000268509929999867988789999998568989983799929------
Q 000713 618 KGNIENVNRAISIKSASFSWEESSSKPTMRNISLEVRPGQKVAICGEVGSGKSTLLAAILGEVPHTQGTIQVYG------ 691 (1335)
Q Consensus 618 ~~~~~~~~~~I~i~~~~f~w~~~~~~~~L~~i~l~i~~G~~v~IvG~~GsGKStLl~~ilGe~~~~~G~v~v~g------ 691 (1335)
.+... ....|+++|++|+|+.++ +++|+|+||++++|+.++|+||+|||||||+++++|.++|.+|+|.++|
T Consensus 333 ~~~~~-~~~~i~~~~v~~~y~~~~-~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~~~~~ 410 (582)
T 3b5x_A 333 YEAER-VNGEVDVKDVTFTYQGKE-KPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDY 410 (582)
T ss_pred CCCCC-CCCEEEEEEEEEECCCCC-CCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEHHHC
T ss_conf 77777-888289999899728998-6540041699879998999899999799999999657789998798999985638
Q ss_pred -------EEEEEECCCCCCCCCHHHHHCCCC--CCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf -------399991577688888889841399--99937899999981337888409999985226888877979999999
Q 000713 692 -------KTAYVSQTAWIQTGSIRENILFGS--PMDSHQYQETLERCSLIKDLELLPYGDNTEIGERGVNLSGGQKQRIQ 762 (1335)
Q Consensus 692 -------~iayv~Q~pwi~~~TireNIlfg~--~~~~~~y~~vl~~c~L~~dl~~lp~Gd~T~IGe~G~~LSGGQkqRi~ 762 (1335)
.++|++|+|+++++|++|||.+|. ..++++.+++++.+++.+.++.+|+|++|.+||+|.+||||||||++
T Consensus 411 ~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LSgGq~qr~~ 490 (582)
T 3b5x_A 411 KLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVA 490 (582)
T ss_pred CHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHH
T ss_conf 89999648589827990531029999856688999999999999987989999847653345106888847999999999
Q ss_pred HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHHHHHCC
Q ss_conf 99998149979998288888899989999999999973997899981688861237969999499698813837997154
Q 000713 763 LARALYQDADIYLLDDPFSAVDAHTASSLFNDYVMEALSGKVVLLVTHQVDFLPAFDSVLLMSDGEILRAAPYHQLLASS 842 (1335)
Q Consensus 763 LARAly~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kTvilvTH~~~~l~~~D~iivl~~G~i~~~G~~~eL~~~~ 842 (1335)
||||++++|++++||||+|+||+++.+.+.+ .+....+++|+|++||+++.+..||+|++|++|++++.|+++|+++.+
T Consensus 491 iAral~~~p~illlDEpts~LD~~~~~~i~~-~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 569 (582)
T 3b5x_A 491 IARALLRDAPVLILDEATSALDTESERAIQA-ALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQD 569 (582)
T ss_pred HHHHHHCCCCEEEEECCCCCCCHHHHHHHHH-HHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCC
T ss_conf 9999974999999978544689999999999-999972899899993688999819989999899899977899998488
Q ss_pred HHHHHHHHHH
Q ss_conf 5899999983
Q 000713 843 KEFQELVSAH 852 (1335)
Q Consensus 843 ~~f~~l~~~~ 852 (1335)
+.|.++.+.+
T Consensus 570 ~~~~~~~~~q 579 (582)
T 3b5x_A 570 GAYAQLHRIQ 579 (582)
T ss_pred CHHHHHHHHH
T ss_conf 5899999986
No 9
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=593.42 Aligned_cols=546 Identities=21% Similarity=0.241 Sum_probs=442.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999989999999999999999999999999999999601787-43-689999999999999999999999999999999
Q 000713 303 TILICHWRDIFMSGFFALIKVLTLSAGPLFLNAFILVAESKAG-FK-YEGYLLAITLFLAKILESLSQRQRYFRSRLIGL 380 (1335)
Q Consensus 303 al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~-~~-~~g~~l~~~l~~~~~~~sl~~~~~~~~~~~~g~ 380 (1335)
...+.+++.++...++.++..++..+.|++++.+++.+..... .. ..-+.++..+++..++..++.....+...+.+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (595)
T 2yl4_A 12 GLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTSGQ 91 (595)
T ss_dssp HHHGGGHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99887899999999999999999999999999999999735740266799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999738955532799889999999999999889-99999999999999999999988977999999999
Q 000713 381 KVRSLLTAAIYRKQLRLSNAARLMHSGGEIMNYVTVDAYRIGEF-PFWFHQIWTTSVQLCIALIILFHAVGLATIAALVV 459 (1335)
Q Consensus 381 riR~~l~~~Iy~K~L~ls~~~~~~~s~GeIvNlmsvD~~ri~~~-~~~~~~lw~~plqi~ial~lL~~~lG~s~l~gl~v 459 (1335)
++...+...+|+|.++++....+++++|+++|.++.|++++.++ ...+..++..++.+++++++++..-.+.+++.+++
T Consensus 92 ~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~ 171 (595)
T 2yl4_A 92 RIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATFVLSV 171 (595)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999819999977798488999999999999999999999999999999999999999819999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999999999712799998461799999999----9999999999999999999
Q 000713 460 ITITVLCNTPLAKLQHKFQTKLMVAQDERLKACSEAFVNMKVLKLYAWETHFKNAIE----ILRNVEYKWLSAVQLRKAY 535 (1335)
Q Consensus 460 ~il~~~~~~~l~~~~~~~q~~~m~~~D~Ri~~~sEiL~~IrvIKl~aWE~~f~~~I~----~~R~~El~~l~~~~~~~a~ 535 (1335)
+++...+...+.+...+..++..+..++..+.+.|.++||++||.|++|+.+.++.. +.++.+.+..+........
T Consensus 172 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (595)
T 2yl4_A 172 VPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGFFGA 251 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999981199999837569999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 96898689999999999999983376448889999999999999999999999999999999999999863997872000
Q 000713 536 NGFLFWSSPVLVSTATFGACYFLNVPLYASNVFTFVATLRLVQDPIRIIPDVIGVFIQANVAFSRIVNFLEAPELQSMNI 615 (1335)
Q Consensus 536 ~~~~~~~~p~lv~~~tF~~~~l~g~~Lta~~vFt~lalf~~L~~pl~~lp~~i~~~~qa~vS~~RI~~FL~~~e~~~~~~ 615 (1335)
..++.. ...+.++.++.+....+.++++.+++.+.+...+..|+..++..+..+.++.+|.+|+.++++.++..++..
T Consensus 252 ~~~~~~--~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~ 329 (595)
T 2yl4_A 252 TGLSGN--LIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLPFNE 329 (595)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSCSSC
T ss_pred HHHHHH--HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 999999--999999999999998699789999999999999999999999999999999999999999983897667777
Q ss_pred CCCCCCCCCCCC-EEEEEEEEEECCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC---
Q ss_conf 125887787641-9998569982699999950000268509929999867988789999998568989983799929---
Q 000713 616 RQKGNIENVNRA-ISIKSASFSWEESSSKPTMRNISLEVRPGQKVAICGEVGSGKSTLLAAILGEVPHTQGTIQVYG--- 691 (1335)
Q Consensus 616 ~~~~~~~~~~~~-I~i~~~~f~w~~~~~~~~L~~i~l~i~~G~~v~IvG~~GsGKStLl~~ilGe~~~~~G~v~v~g--- 691 (1335)
...+... .... |+++|++|+|+.+++.++|+|+||++++|+.++|+||+|||||||+++|+|.++|.+|+|.++|
T Consensus 330 ~~~~~~~-~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~i 408 (595)
T 2yl4_A 330 GVILNEK-SFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDI 408 (595)
T ss_dssp SBCCCTT-TCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEETTEET
T ss_pred CCCCCCC-CCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEH
T ss_conf 8777767-899838999889985899888120112799849988999899999799999998258578983799999981
Q ss_pred ----------EEEEEECCCCCCCCCHHHHHCCCCC----CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf ----------3999915776888888898413999----99378999999813378884099999852268888779799
Q 000713 692 ----------KTAYVSQTAWIQTGSIRENILFGSP----MDSHQYQETLERCSLIKDLELLPYGDNTEIGERGVNLSGGQ 757 (1335)
Q Consensus 692 ----------~iayv~Q~pwi~~~TireNIlfg~~----~~~~~y~~vl~~c~L~~dl~~lp~Gd~T~IGe~G~~LSGGQ 757 (1335)
.++|++|+|+++++|++|||.+|.+ .++++.+++++.+++.++++.+|+|.+|.+||+|.+|||||
T Consensus 409 ~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~LSgGq 488 (595)
T 2yl4_A 409 RQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQ 488 (595)
T ss_dssp TTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCCCCHHH
T ss_pred HHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHH
T ss_conf 11799999732289836883268779999840587766568999999999869799997473201350168878689999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHH
Q ss_conf 99999999981499799982888888999899999999999739978999816888612379699994996988138379
Q 000713 758 KQRIQLARALYQDADIYLLDDPFSAVDAHTASSLFNDYVMEALSGKVVLLVTHQVDFLPAFDSVLLMSDGEILRAAPYHQ 837 (1335)
Q Consensus 758 kqRi~LARAly~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kTvilvTH~~~~l~~~D~iivl~~G~i~~~G~~~e 837 (1335)
|||++||||++++|++++||||+|+||+++.+.+.+ .+....+++|+|++||+++.+..||+|++|++|++++.|+++|
T Consensus 489 ~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~-~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~ 567 (595)
T 2yl4_A 489 KQRIAIARALLKNPKILLLDEATSALDAENEYLVQE-ALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYGKHEE 567 (595)
T ss_dssp HHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHH-HHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEEECSCC
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHH
T ss_conf 999999999975999999988666899899999999-9999965997999946878997599899998998999788999
Q ss_pred HHH-CCHHHHHHHHHH
Q ss_conf 971-545899999983
Q 000713 838 LLA-SSKEFQELVSAH 852 (1335)
Q Consensus 838 L~~-~~~~f~~l~~~~ 852 (1335)
+++ .++.|.++...+
T Consensus 568 l~~~~~~~~~~~~~~q 583 (595)
T 2yl4_A 568 LLSKPNGIYRKLMNKQ 583 (595)
T ss_dssp ------C---------
T ss_pred HHHCCCHHHHHHHHHH
T ss_conf 9747872999999974
No 10
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=543.54 Aligned_cols=545 Identities=20% Similarity=0.267 Sum_probs=410.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9899999999999999999999999999999996017874---3689999999999999999999999999999999999
Q 000713 307 CHWRDIFMSGFFALIKVLTLSAGPLFLNAFILVAESKAGF---KYEGYLLAITLFLAKILESLSQRQRYFRSRLIGLKVR 383 (1335)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~---~~~g~~l~~~l~~~~~~~sl~~~~~~~~~~~~g~riR 383 (1335)
..|+.++++.++.++...+..+.|+++..+++.+...... ......++..+++..++..++.....+...+.+.++.
T Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~ 781 (1284)
T 3g5u_A 702 TEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILT 781 (1284)
T ss_dssp HTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 15799999999999999999999999999999985568503367799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q ss_conf 99999999999738955532--79988999999999999988999-9999999999999999999889779-99999999
Q 000713 384 SLLTAAIYRKQLRLSNAARL--MHSGGEIMNYVTVDAYRIGEFPF-WFHQIWTTSVQLCIALIILFHAVGL-ATIAALVV 459 (1335)
Q Consensus 384 ~~l~~~Iy~K~L~ls~~~~~--~~s~GeIvNlmsvD~~ri~~~~~-~~~~lw~~plqi~ial~lL~~~lG~-s~l~gl~v 459 (1335)
..+...+|+|.++.+..-.+ .+++|+++|.++.|++.+.+... .+..+....+.++.++++++. ++| .+++.+++
T Consensus 782 ~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~i~~~~-~~~~l~lv~l~~ 860 (1284)
T 3g5u_A 782 KRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLI-YGWQLTLLLLAI 860 (1284)
T ss_dssp HHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_conf 9999999999983998887578998899999999999999999999999999999999999999999-969999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999971279999846179999999999999999999999999999689
Q 000713 460 ITITVLCNTPLAKLQHKFQTKLMVAQDERLKACSEAFVNMKVLKLYAWETHFKNAIEILRNVEYKWLSAVQLRKAYNGFL 539 (1335)
Q Consensus 460 ~il~~~~~~~l~~~~~~~q~~~m~~~D~Ri~~~sEiL~~IrvIKl~aWE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~ 539 (1335)
+++++.+.....+...+...+..+..++..+...|.++|+++||.+++|+.|.++..+.-+...+...+.....+....+
T Consensus 861 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 940 (1284)
T 3g5u_A 861 VPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSF 940 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999998899999846599999999999999999999999999999999
Q ss_pred HHHHH--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCC
Q ss_conf 86899--99999999999983376448889999999999999999999999999999999999999863997-8720001
Q 000713 540 FWSSP--VLVSTATFGACYFLNVPLYASNVFTFVATLRLVQDPIRIIPDVIGVFIQANVAFSRIVNFLEAPE-LQSMNIR 616 (1335)
Q Consensus 540 ~~~~p--~lv~~~tF~~~~l~g~~Lta~~vFt~lalf~~L~~pl~~lp~~i~~~~qa~vS~~RI~~FL~~~e-~~~~~~~ 616 (1335)
..... ..+..+.++.+....+.++.+.++..+..+.....|+..+......+.++..+.+|+.++++.++ .+.....
T Consensus 941 ~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~ 1020 (1284)
T 3g5u_A 941 TQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQ 1020 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 99999999999999999999909806999999999999999999999999999999999999999998388766665556
Q ss_pred CCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-----
Q ss_conf 258877876419998569982699999950000268509929999867988789999998568989983799929-----
Q 000713 617 QKGNIENVNRAISIKSASFSWEESSSKPTMRNISLEVRPGQKVAICGEVGSGKSTLLAAILGEVPHTQGTIQVYG----- 691 (1335)
Q Consensus 617 ~~~~~~~~~~~I~i~~~~f~w~~~~~~~~L~~i~l~i~~G~~v~IvG~~GsGKStLl~~ilGe~~~~~G~v~v~g----- 691 (1335)
..+. ...++.|+++|++|+|+..++.++|+|+||++++||.++|+|++|||||||+++|+|.++|.+|+|.++|
T Consensus 1021 ~~~~-~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~ 1099 (1284)
T 3g5u_A 1021 GLKP-NMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQ 1099 (1284)
T ss_dssp CCCT-TTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTS
T ss_pred CCCC-CCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCC
T ss_conf 6545-677785799998997799998700203059976998899988999978999999946867899779899998000
Q ss_pred --------EEEEEECCCCCCCCCHHHHHCCCCC---CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf --------3999915776888888898413999---99378999999813378884099999852268888779799999
Q 000713 692 --------KTAYVSQTAWIQTGSIRENILFGSP---MDSHQYQETLERCSLIKDLELLPYGDNTEIGERGVNLSGGQKQR 760 (1335)
Q Consensus 692 --------~iayv~Q~pwi~~~TireNIlfg~~---~~~~~y~~vl~~c~L~~dl~~lp~Gd~T~IGe~G~~LSGGQkqR 760 (1335)
+++||||+|.++++||+|||.+|.+ .++++..++++.+.+.+.++.+|+|.+|.+||+|.+||||||||
T Consensus 1100 ~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qr 1179 (1284)
T 3g5u_A 1100 LNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQR 1179 (1284)
T ss_dssp SCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHH
T ss_pred CCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 78999970268987787406666999974668778999999999999839599997270424561178889338999999
Q ss_pred HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHHHHH
Q ss_conf 99999981499799982888888999899999999999739978999816888612379699994996988138379971
Q 000713 761 IQLARALYQDADIYLLDDPFSAVDAHTASSLFNDYVMEALSGKVVLLVTHQVDFLPAFDSVLLMSDGEILRAAPYHQLLA 840 (1335)
Q Consensus 761 i~LARAly~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kTvilvTH~~~~l~~~D~iivl~~G~i~~~G~~~eL~~ 840 (1335)
++||||++++|+|++||||+|+||+.+.+.+.+ .+....+|+|+|+|||+++.+..||+|++|++|+|++.|+++|+++
T Consensus 1180 v~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~-~l~~~~~~~tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~ 1258 (1284)
T 3g5u_A 1180 IAIARALVRQPHILLLDEATSALDTESEKVVQE-ALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLA 1258 (1284)
T ss_dssp HHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHH-HHHHHSSSSCEEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH-HHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHH
T ss_conf 999999974999999868755579999999999-9998679998999955879998099899998998999778999984
Q ss_pred CCHHHHHHHHHHHH
Q ss_conf 54589999998342
Q 000713 841 SSKEFQELVSAHKE 854 (1335)
Q Consensus 841 ~~~~f~~l~~~~~~ 854 (1335)
.++.|.+++..+..
T Consensus 1259 ~~g~y~~l~~~q~~ 1272 (1284)
T 3g5u_A 1259 QKGIYFSMVSVQAG 1272 (1284)
T ss_dssp SCSHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHH
T ss_conf 77779999999761
Done!