BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000715
(1335 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 135/260 (51%), Gaps = 10/260 (3%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVD-KSQKSKVLQEVRMLHSLDHPNVLRFY 62
+ + E +G G Y +VYK K+T + AIK V +S ++++E+ ++ D P+V+++Y
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQDNQ-LPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
Y + LW+V+EYC G + ++R N+ L ED I + Q ++ L+YLH I+ D
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRD 150
Query: 122 LKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSY 181
+K NILL+ G KL DFG+A +L+D + ++ GTP +MAPE+ +E G +
Sbjct: 151 IKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI-----GTPFWMAPEVIQEIGYNCV 205
Query: 182 ASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXX--XXXXXXXXXXXXFANLINSLLV 239
A D+W LG E G+PP+ + + I F + + LV
Sbjct: 206 A-DIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLV 264
Query: 240 KDPAQRLHWSDLCGHAFWRT 259
K P QR + L H F R+
Sbjct: 265 KSPEQRATATQLLQHPFVRS 284
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 141 bits (355), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 160/336 (47%), Gaps = 31/336 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV------DKSQKSKVLQEVRML-HSL 53
+ + + IGRG Y+ V R KKT +A++ V D V E + +
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 54 DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLH 113
+HP ++ +S ++T + L+ V+EY GGDLM +++ +LPE+ R + ++ AL YLH
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
+GIIY DLK N+LLD G KL D+G+ ++ S+ CGTP Y+APE+
Sbjct: 171 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF-----CGTPNYIAPEIL 225
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPF--VG------REFTQLVKSILXXXXXXXXXX 225
G + ++ D W LG +++E AGR PF VG + + ++
Sbjct: 226 -RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284
Query: 226 XXXXFANLINSLLVKDPAQRL------HWSDLCGHAFWRTKLTPMPLPPQ--PAFD-SLK 276
A+++ S L KDP +RL ++D+ GH F+R M Q P F ++
Sbjct: 285 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNIS 344
Query: 277 GAVRQDE-NSMLGSTPVRVTPSGRKTQTKTSGRVFE 311
G D +S + PV++ P K FE
Sbjct: 345 GEFGLDNFDSQFTNEPVQLXPDDDDIVRKIDQSEFE 380
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 141 bits (355), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 159/336 (47%), Gaps = 31/336 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV------DKSQKSKVLQEVRML-HSL 53
+ + + IGRG Y+ V R KKT +A+K V D V E + +
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 54 DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLH 113
+HP ++ +S ++T + L+ V+EY GGDLM +++ +LPE+ R + ++ AL YLH
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
+GIIY DLK N+LLD G KL D+G+ ++ S CGTP Y+APE+
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF-----CGTPNYIAPEIL 178
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPF--VG------REFTQLVKSILXXXXXXXXXX 225
G + ++ D W LG +++E AGR PF VG + + ++
Sbjct: 179 -RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 237
Query: 226 XXXXFANLINSLLVKDPAQRL------HWSDLCGHAFWRTKLTPMPLPPQ--PAFD-SLK 276
A+++ S L KDP +RL ++D+ GH F+R M Q P F ++
Sbjct: 238 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNIS 297
Query: 277 GAVRQDE-NSMLGSTPVRVTPSGRKTQTKTSGRVFE 311
G D +S + PV++ P K FE
Sbjct: 298 GEFGLDNFDSQFTNEPVQLXPDDDDIVRKIDQSEFE 333
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 140 bits (353), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 159/336 (47%), Gaps = 31/336 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV------DKSQKSKVLQEVRML-HSL 53
+ + + IGRG Y+ V R KKT +A+K V D V E + +
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 54 DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLH 113
+HP ++ +S ++T + L+ V+EY GGDLM +++ +LPE+ R + ++ AL YLH
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
+GIIY DLK N+LLD G KL D+G+ ++ S CGTP Y+APE+
Sbjct: 128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF-----CGTPNYIAPEIL 182
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPF--VG------REFTQLVKSILXXXXXXXXXX 225
G + ++ D W LG +++E AGR PF VG + + ++
Sbjct: 183 -RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 241
Query: 226 XXXXFANLINSLLVKDPAQRL------HWSDLCGHAFWRTKLTPMPLPPQ--PAFD-SLK 276
A+++ S L KDP +RL ++D+ GH F+R M Q P F ++
Sbjct: 242 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNIS 301
Query: 277 GAVRQDE-NSMLGSTPVRVTPSGRKTQTKTSGRVFE 311
G D +S + PV++ P K FE
Sbjct: 302 GEFGLDNFDSQFTNEPVQLXPDDDDIVRKIDQSEFE 337
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 140 bits (352), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 140/280 (50%), Gaps = 27/280 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV------DKSQKSKVLQEVRML-HSL 53
+ + + IGRG Y+ V R KKT +A+K V D V E + +
Sbjct: 19 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 54 DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLH 113
+HP ++ +S ++T + L+ V+EY GGDLM +++ +LPE+ R + ++ AL YLH
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
+GIIY DLK N+LLD G KL D+G+ ++ S CGTP Y+APE+
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF-----CGTPNYIAPEIL 193
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPF--VG------REFTQLVKSILXXXXXXXXXX 225
G + ++ D W LG +++E AGR PF VG + + ++
Sbjct: 194 -RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 252
Query: 226 XXXXFANLINSLLVKDPAQRL------HWSDLCGHAFWRT 259
A+++ S L KDP +RL ++D+ GH F+R
Sbjct: 253 MSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRN 292
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 139 bits (351), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 133/253 (52%), Gaps = 15/253 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKS------VDKSQKSKVLQEVRMLHSLD 54
MN + + +G+G + V R+K T Y+A+K + K + + + E R+L +
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP + ++T L V+EY GG+L L ++ E+ R ++V AL+YLHS
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 126
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARK-LSDASKAPSSMLPQAKCGTPCYMAPELF 173
+ ++Y D+K N++LD++G K+ DFGL ++ +SD + + CGTP Y+APE+
Sbjct: 127 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF------CGTPEYLAPEVL 180
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
E+ + A D WGLG V+YE GR PF ++ +L + IL +L
Sbjct: 181 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSL 238
Query: 234 INSLLVKDPAQRL 246
+ LL KDP QRL
Sbjct: 239 LAGLLKKDPKQRL 251
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 133/253 (52%), Gaps = 15/253 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKS------VDKSQKSKVLQEVRMLHSLD 54
MN + + +G+G + V R+K T Y+A+K + K + + + E R+L +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP + ++T L V+EY GG+L L ++ E+ R ++V AL+YLHS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARK-LSDASKAPSSMLPQAKCGTPCYMAPELF 173
+ ++Y D+K N++LD++G K+ DFGL ++ +SD + + CGTP Y+APE+
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF------CGTPEYLAPEVL 177
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
E+ + A D WGLG V+YE GR PF ++ +L + IL +L
Sbjct: 178 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSL 235
Query: 234 INSLLVKDPAQRL 246
+ LL KDP QRL
Sbjct: 236 LAGLLKKDPKQRL 248
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 133/253 (52%), Gaps = 15/253 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKS------VDKSQKSKVLQEVRMLHSLD 54
MN + + +G+G + V R+K T Y+A+K + K + + + E R+L +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP + ++T L V+EY GG+L L ++ E+ R ++V AL+YLHS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARK-LSDASKAPSSMLPQAKCGTPCYMAPELF 173
+ ++Y D+K N++LD++G K+ DFGL ++ +SD + + CGTP Y+APE+
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF------CGTPEYLAPEVL 177
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
E+ + A D WGLG V+YE GR PF ++ +L + IL +L
Sbjct: 178 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSL 235
Query: 234 INSLLVKDPAQRL 246
+ LL KDP QRL
Sbjct: 236 LAGLLKKDPKQRL 248
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 133/253 (52%), Gaps = 15/253 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKS------VDKSQKSKVLQEVRMLHSLD 54
MN + + +G+G + V R+K T Y+A+K + K + + + E R+L +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP + ++T L V+EY GG+L L ++ E+ R ++V AL+YLHS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARK-LSDASKAPSSMLPQAKCGTPCYMAPELF 173
+ ++Y D+K N++LD++G K+ DFGL ++ +SD + + CGTP Y+APE+
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM------KXFCGTPEYLAPEVL 177
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
E+ + A D WGLG V+YE GR PF ++ +L + IL +L
Sbjct: 178 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSL 235
Query: 234 INSLLVKDPAQRL 246
+ LL KDP QRL
Sbjct: 236 LAGLLKKDPKQRL 248
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 133/253 (52%), Gaps = 15/253 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKS------VDKSQKSKVLQEVRMLHSLD 54
MN + + +G+G + V R+K T Y+A+K + K + + + E R+L +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP + ++T L V+EY GG+L L ++ E+ R ++V AL+YLHS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARK-LSDASKAPSSMLPQAKCGTPCYMAPELF 173
+ ++Y D+K N++LD++G K+ DFGL ++ +SD + + CGTP Y+APE+
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM------KXFCGTPEYLAPEVL 177
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
E+ + A D WGLG V+YE GR PF ++ +L + IL +L
Sbjct: 178 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSL 235
Query: 234 INSLLVKDPAQRL 246
+ LL KDP QRL
Sbjct: 236 LAGLLKKDPKQRL 248
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 135/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 157
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + A GT Y++PEL E +S
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NAFVGTAQYVSPELLTEKSA-CKSS 213
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 271
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 272 TKRLGCEEMEGYG---------PLKAHPFFESV 295
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 129/250 (51%), Gaps = 12/250 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDH 55
+ Y + + IG+G ++ V R T + A+K +DK+Q + K+ +EVR++ L+H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
PN+++ + ET L+LV+EY GG++ L ++ E R + +V A+QY H K
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 116 GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
I++ DLK N+LLD + K+ DFG + + + +K A CG P Y APELF+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL------DAFCGAPPYAAPELFQG 186
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLIN 235
D+W LG +LY +G PF G+ +L + +L NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDC-ENLLK 245
Query: 236 SLLVKDPAQR 245
L+ +P++R
Sbjct: 246 KFLILNPSKR 255
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 133/253 (52%), Gaps = 15/253 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKS------VDKSQKSKVLQEVRMLHSLD 54
MN + + +G+G + V R+K T Y+A+K + K + + + E R+L +
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP + ++T L V+EY GG+L L ++ E+ R ++V AL+YLHS
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 128
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARK-LSDASKAPSSMLPQAKCGTPCYMAPELF 173
+ ++Y D+K N++LD++G K+ DFGL ++ +SD + + CGTP Y+APE+
Sbjct: 129 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM------KXFCGTPEYLAPEVL 182
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
E+ + A D WGLG V+YE GR PF ++ +L + IL +L
Sbjct: 183 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSL 240
Query: 234 INSLLVKDPAQRL 246
+ LL KDP QRL
Sbjct: 241 LAGLLKKDPKQRL 253
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 126/250 (50%), Gaps = 12/250 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDH 55
+ Y + + IG+G ++ V R T AIK +DK+Q + K+ +EVR++ L+H
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
PN+++ + ET L+L++EY GG++ L ++ E R + +V A+QY H K
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 133
Query: 116 GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
I++ DLK N+LLD + K+ DFG + + + K A CG P Y APELF+
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL------DAFCGAPPYAAPELFQG 187
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLIN 235
D+W LG +LY +G PF G+ +L + +L NL+
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDC-ENLLK 246
Query: 236 SLLVKDPAQR 245
LV +P +R
Sbjct: 247 RFLVLNPIKR 256
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 133/253 (52%), Gaps = 15/253 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKS------VDKSQKSKVLQEVRMLHSLD 54
MN + + +G+G + V R+K T Y+A+K + K + + + E R+L +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP + ++T L V+EY GG+L L ++ E+ R ++V AL+YLHS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARK-LSDASKAPSSMLPQAKCGTPCYMAPELF 173
+ ++Y D+K N++LD++G K+ DFGL ++ +SD + + CGTP Y+APE+
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM------KXFCGTPEYLAPEVL 177
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
E+ + A D WGLG V+YE GR PF ++ +L + IL +L
Sbjct: 178 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSL 235
Query: 234 INSLLVKDPAQRL 246
+ LL KDP QRL
Sbjct: 236 LAGLLKKDPKQRL 248
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 127/250 (50%), Gaps = 12/250 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDH 55
+ Y + + IG+G ++ V R T AIK +DK+Q + K+ +EVR++ L+H
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 70
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
PN+++ + ET L+L++EY GG++ L ++ E R + +V A+QY H K
Sbjct: 71 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 130
Query: 116 GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
I++ DLK N+LLD + K+ DFG + + + K + CG+P Y APELF+
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTF------CGSPPYAAPELFQG 184
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLIN 235
D+W LG +LY +G PF G+ +L + +L NL+
Sbjct: 185 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDC-ENLLK 243
Query: 236 SLLVKDPAQR 245
LV +P +R
Sbjct: 244 RFLVLNPIKR 253
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 12/250 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDH 55
+ Y + + IG+G ++ V R T + A+K +DK+Q + K+ +EVR++ L+H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
PN+++ + ET L+LV+EY GG++ L ++ E R + +V A+QY H K
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 116 GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
I++ DLK N+LLD + K+ DFG + + + +K + CG+P Y APELF+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF------CGSPPYAAPELFQG 186
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLIN 235
D+W LG +LY +G PF G+ +L + +L NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDC-ENLLK 245
Query: 236 SLLVKDPAQR 245
L+ +P++R
Sbjct: 246 KFLILNPSKR 255
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 146/290 (50%), Gaps = 29/290 (10%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKS------VDKSQKSKVLQEVRMLHSLD 54
MN++ + +G+G + V ++K T Y+A+K V K + + L E R+L +
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP + ++T L V+EY GG+L L ++ ED R ++V AL YLHS
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 126
Query: 115 -KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
K ++Y DLK N++LD++G K+ DFGL + + K ++M + CGTP Y+APE+
Sbjct: 127 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATM--KXFCGTPEYLAPEVL 181
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
E+ + A D WGLG V+YE GR PF ++ +L + IL +L
Sbjct: 182 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA-KSL 239
Query: 234 INSLLVKDPAQRL-----HWSDLCGHAF---------WRTKLTPMPLPPQ 269
++ LL KDP QRL ++ H F + KL+P P PQ
Sbjct: 240 LSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSP-PFKPQ 288
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 146/290 (50%), Gaps = 29/290 (10%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKS------VDKSQKSKVLQEVRMLHSLD 54
MN++ + +G+G + V ++K T Y+A+K V K + + L E R+L +
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP + ++T L V+EY GG+L L ++ ED R ++V AL YLHS
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 127
Query: 115 -KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
K ++Y DLK N++LD++G K+ DFGL + + K ++M + CGTP Y+APE+
Sbjct: 128 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATM--KXFCGTPEYLAPEVL 182
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
E+ + A D WGLG V+YE GR PF ++ +L + IL +L
Sbjct: 183 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA-KSL 240
Query: 234 INSLLVKDPAQRL-----HWSDLCGHAF---------WRTKLTPMPLPPQ 269
++ LL KDP QRL ++ H F + KL+P P PQ
Sbjct: 241 LSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSP-PFKPQ 289
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 146/290 (50%), Gaps = 29/290 (10%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKS------VDKSQKSKVLQEVRMLHSLD 54
MN++ + +G+G + V ++K T Y+A+K V K + + L E R+L +
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP + ++T L V+EY GG+L L ++ ED R ++V AL YLHS
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 266
Query: 115 -KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
K ++Y DLK N++LD++G K+ DFGL + + K ++M + CGTP Y+APE+
Sbjct: 267 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATM--KTFCGTPEYLAPEVL 321
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
E+ + A D WGLG V+YE GR PF ++ +L + IL +L
Sbjct: 322 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA-KSL 379
Query: 234 INSLLVKDPAQRL-----HWSDLCGHAF---------WRTKLTPMPLPPQ 269
++ LL KDP QRL ++ H F + KL+P P PQ
Sbjct: 380 LSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSP-PFKPQ 428
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 146/290 (50%), Gaps = 29/290 (10%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKS------VDKSQKSKVLQEVRMLHSLD 54
MN++ + +G+G + V ++K T Y+A+K V K + + L E R+L +
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP + ++T L V+EY GG+L L ++ ED R ++V AL YLHS
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 269
Query: 115 -KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
K ++Y DLK N++LD++G K+ DFGL + + K ++M + CGTP Y+APE+
Sbjct: 270 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATM--KTFCGTPEYLAPEVL 324
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
E+ + A D WGLG V+YE GR PF ++ +L + IL +L
Sbjct: 325 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA-KSL 382
Query: 234 INSLLVKDPAQRL-----HWSDLCGHAF---------WRTKLTPMPLPPQ 269
++ LL KDP QRL ++ H F + KL+P P PQ
Sbjct: 383 LSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSP-PFKPQ 431
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 12/250 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDH 55
+ Y + + IG+G ++ V R T + A+K +DK+Q + K+ +EVR++ L+H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
PN+++ + ET L+LV+EY GG++ L ++ E R + +V A+QY H K
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 116 GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
I++ DLK N+LLD + K+ DFG + + + +K + CG+P Y APELF+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF------CGSPPYAAPELFQG 186
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLIN 235
D+W LG +LY +G PF G+ +L + +L NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDC-ENLLK 245
Query: 236 SLLVKDPAQR 245
L+ +P++R
Sbjct: 246 KFLILNPSKR 255
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 146/290 (50%), Gaps = 29/290 (10%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKS------VDKSQKSKVLQEVRMLHSLD 54
MN++ + +G+G + V ++K T Y+A+K V K + + L E R+L +
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP + ++T L V+EY GG+L L ++ ED R ++V AL YLHS
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 128
Query: 115 -KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
K ++Y DLK N++LD++G K+ DFGL + + K ++M + CGTP Y+APE+
Sbjct: 129 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATM--KXFCGTPEYLAPEVL 183
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
E+ + A D WGLG V+YE GR PF ++ +L + IL +L
Sbjct: 184 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA-KSL 241
Query: 234 INSLLVKDPAQRL-----HWSDLCGHAF---------WRTKLTPMPLPPQ 269
++ LL KDP QRL ++ H F + KL+P P PQ
Sbjct: 242 LSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSP-PFKPQ 290
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 135/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 156
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + + GT Y++PEL E +S
Sbjct: 157 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NSFVGTAQYVSPELLTEKSACK-SS 212
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 270
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 271 TKRLGCEEMEGYG---------PLKAHPFFESV 294
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 135/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 160
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + + GT Y++PEL E +S
Sbjct: 161 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NSFVGTAQYVSPELLTEKSA-CKSS 216
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 274
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 275 TKRLGCEEMEGYG---------PLKAHPFFESV 298
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 128/261 (49%), Gaps = 28/261 (10%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G+G ++ VY+ T AIK +DK K V EV++ L HP++L Y+
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQ-LPEDSIRDLAQDLVRALQYLHSKGIIYCDL 122
++E S +++LVLE C G++ L+ + E+ R ++ + YLHS GI++ DL
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDL 138
Query: 123 KPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAK----CGTPCYMAPELFEEGGV 178
SN+LL N K+ DFGLA +L +P K CGTP Y++PE+
Sbjct: 139 TLSNLLLTRNMNIKIADFGLATQLK---------MPHEKHYTLCGTPNYISPEIATRSA- 188
Query: 179 HSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXX---XXXXFANLIN 235
H SD+W LGC+ Y GRPPF T VK+ L +LI+
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFD----TDTVKNTLNKVVLADYEMPSFLSIEAKDLIH 244
Query: 236 SLLVKDPAQRLHWSDLCGHAF 256
LL ++PA RL S + H F
Sbjct: 245 QLLRRNPADRLSLSSVLDHPF 265
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 137 bits (344), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 134/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 157
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + GT Y++PEL E +S
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NXFVGTAQYVSPELLTEKSA-CKSS 213
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 271
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 272 TKRLGCEEMEGYG---------PLKAHPFFESV 295
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 137 bits (344), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 134/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 74
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 75 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 134
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + GT Y++PEL E +S
Sbjct: 135 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NXFVGTAQYVSPELLTEKSACK-SS 190
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 191 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 248
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 249 TKRLGCEEMEGYG---------PLKAHPFFESV 272
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 137 bits (344), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 134/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 159
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + GT Y++PEL E +S
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NXFVGTAQYVSPELLTEKSA-CKSS 215
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 273
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 274 TKRLGCEEMEGYG---------PLKAHPFFESV 297
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 137 bits (344), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 134/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 157
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + GT Y++PEL E +S
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NXFVGTAQYVSPELLTEKSA-CKSS 213
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 271
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 272 TKRLGCEEMEGYG---------PLKAHPFFESV 295
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 137 bits (344), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 134/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 156
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + GT Y++PEL E +S
Sbjct: 157 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NXFVGTAQYVSPELLTEKSACK-SS 212
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 270
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 271 TKRLGCEEMEGYG---------PLKAHPFFESV 294
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 137 bits (344), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 130/250 (52%), Gaps = 12/250 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDH 55
+ Y + + IG+G ++ V R T + A++ +DK+Q + K+ +EVR++ L+H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
PN+++ + ET L+LV+EY GG++ L ++ E R + +V A+QY H K
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 116 GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
I++ DLK N+LLD + K+ DFG + + + +K + CG+P Y APELF+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF------CGSPPYAAPELFQG 186
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLIN 235
D+W LG +LY +G PF G+ +L + +L NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDC-ENLLK 245
Query: 236 SLLVKDPAQR 245
L+ +P++R
Sbjct: 246 KFLILNPSKR 255
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 137 bits (344), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 135/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 100 TFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 159
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + + GT Y++PEL E S +S
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NSFVGTAQYVSPELLTEKSA-SKSS 215
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 273
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 274 TKRLGCEEMEGYG---------PLKAHPFFESV 297
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 137 bits (344), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 134/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 81
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 82 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 141
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + GT Y++PEL E +S
Sbjct: 142 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NXFVGTAQYVSPELLTEKSA-CKSS 197
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 198 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 255
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 256 TKRLGCEEMEGYG---------PLKAHPFFESV 279
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 136 bits (343), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 134/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 159
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + GT Y++PEL E +S
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NXFVGTAQYVSPELLTEKSA-CKSS 215
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 273
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 274 TKRLGCEEMEGYG---------PLKAHPFFESV 297
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 136 bits (343), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 129/250 (51%), Gaps = 12/250 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDH 55
+ Y + + IG+G ++ V R T + A+K +DK+Q + K+ +EVR++ L+H
Sbjct: 6 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 65
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
PN+++ + ET L+LV+EY GG++ L + E R + +V A+QY H K
Sbjct: 66 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 116 GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
I++ DLK N+LLD + K+ DFG + + + +K + CG+P Y APELF+
Sbjct: 126 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF------CGSPPYAAPELFQG 179
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLIN 235
D+W LG +LY +G PF G+ +L + +L NL+
Sbjct: 180 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDC-ENLLK 238
Query: 236 SLLVKDPAQR 245
L+ +P++R
Sbjct: 239 KFLILNPSKR 248
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 136 bits (343), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 134/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 75
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 76 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 135
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + GT Y++PEL E +S
Sbjct: 136 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NXFVGTAQYVSPELLTEKSACK-SS 191
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 192 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 249
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 250 TKRLGCEEMEGYG---------PLKAHPFFESV 273
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 136 bits (343), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 134/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 102
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 103 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 162
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + GT Y++PEL E +S
Sbjct: 163 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NXFVGTAQYVSPELLTEKSA-CKSS 218
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 219 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKAR--DLVEKLLVLDA 276
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 277 TKRLGCEEMEGYG---------PLKAHPFFESV 300
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 136 bits (343), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 135/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 159
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + GT Y++PEL E +S
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NXFVGTAQYVSPELLTEKSAXK-SS 215
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E L+ + + +L+ LLV D
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNE--GLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDA 273
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 274 TKRLGCEEMEGYG---------PLKAHPFFESV 297
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 136 bits (342), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 134/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 160
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + GT Y++PEL E +S
Sbjct: 161 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NXFVGTAQYVSPELLTEKSA-CKSS 216
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 274
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 275 TKRLGCEEMEGYG---------PLKAHPFFESV 298
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 136 bits (342), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 134/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 159
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + GT Y++PEL E +S
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NXFVGTAQYVSPELLTEKSA-CKSS 215
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 273
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 274 TKRLGCEEMEGYG---------PLKAHPFFESV 297
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 136 bits (342), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 134/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 77
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 78 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 137
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + GT Y++PEL E +S
Sbjct: 138 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NXFVGTAQYVSPELLTEKSACK-SS 193
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 194 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 251
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 252 TKRLGCEEMEGYG---------PLKAHPFFESV 275
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 136 bits (342), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 134/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 76
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 77 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 136
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + GT Y++PEL E +S
Sbjct: 137 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NXFVGTAQYVSPELLTEKSACK-SS 192
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 193 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 250
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 251 TKRLGCEEMEGYG---------PLKAHPFFESV 274
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 136 bits (342), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 134/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 104
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 105 CFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 164
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + GT Y++PEL E +S
Sbjct: 165 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NXFVGTAQYVSPELLTEKSA-CKSS 220
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 221 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 278
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 279 TKRLGCEEMEGYG---------PLKAHPFFESV 302
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 136 bits (342), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 129/250 (51%), Gaps = 12/250 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDH 55
+ Y + + IG+G ++ V R T + A++ +DK+Q + K+ +EVR++ L+H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
PN+++ + ET L+LV+EY GG++ L ++ E R + +V A+QY H K
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 116 GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
I++ DLK N+LLD + K+ DFG + + + +K CG+P Y APELF+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEF------CGSPPYAAPELFQG 186
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLIN 235
D+W LG +LY +G PF G+ +L + +L NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDC-ENLLK 245
Query: 236 SLLVKDPAQR 245
L+ +P++R
Sbjct: 246 KFLILNPSKR 255
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 119/220 (54%), Gaps = 11/220 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDH 55
+ Y + + IG+G ++ V R T A+K +DK+Q + K+ +EVR++ L+H
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
PN+++ + ET L+LV+EY GG++ L ++ E R + +V A+QY H K
Sbjct: 74 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 133
Query: 116 GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
I++ DLK N+LLD + K+ DFG + + + +K + CG+P Y APELF+
Sbjct: 134 YIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTF------CGSPPYAAPELFQG 187
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
D+W LG +LY +G PF G+ +L + +L
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 227
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 135/273 (49%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +STV R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 159
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + GT Y++PEL E +S
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NXFVGTAQYVSPELLTEKSA-CKSS 215
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E L+ + + +L+ LLV D
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNE--GLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDA 273
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 274 TKRLGCEEMEGYG---------PLKAHPFFESV 297
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
+G G +ST R+ T +AIK ++K K V +E ++ LDHP ++ Y
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++ L+ L Y G+L+ +R+ E R ++V AL+YLH KGII+ DLK
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 157
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P NILL+E+ ++ DFG A+ LS SK + GT Y++PEL E +S
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARA---NXFVGTAQYVSPELLTEKSA-CKSS 213
Query: 184 DLWGLGCVLYECYAGRPPF-VGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDP 242
DLW LGC++Y+ AG PPF G E+ K I +L+ LLV D
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR--DLVEKLLVLDA 271
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSL 275
+RL ++ G+ PL P F+S+
Sbjct: 272 TKRLGCEEMEGYG---------PLKAHPFFESV 295
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 133/253 (52%), Gaps = 15/253 (5%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRK---KKTIEYFAIKSVDKS-----QKSKVLQEVRMLHSL 53
+ + + + +G+G + V+ RK + +A+K + K+ + + E +L +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 54 DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLH 113
+HP V++ + ++T L+L+L++ GGDL + L ++ E+ ++ +L L +LH
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S GIIY DLKP NILLDE G KL DFGL+++ D K S CGT YMAPE+
Sbjct: 148 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF-----CGTVEYMAPEVV 202
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
G HS+++D W G +++E G PF G++ + + IL +L
Sbjct: 203 NRQG-HSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEA-QSL 260
Query: 234 INSLLVKDPAQRL 246
+ +L ++PA RL
Sbjct: 261 LRALFKRNPANRL 273
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 127/250 (50%), Gaps = 12/250 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDH 55
+ Y + + IG+G ++ V R T + A+K +DK+Q + K+ +EVR+ L+H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNH 72
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
PN+++ + ET L+LV EY GG++ L + E R + +V A+QY H K
Sbjct: 73 PNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQK 132
Query: 116 GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
I++ DLK N+LLD + K+ DFG + + + +K A CG P Y APELF+
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKL------DAFCGAPPYAAPELFQG 186
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLIN 235
D+W LG +LY +G PF G+ +L + +L NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDC-ENLLK 245
Query: 236 SLLVKDPAQR 245
L+ +P++R
Sbjct: 246 KFLILNPSKR 255
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 136/273 (49%), Gaps = 13/273 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS------QKSKVLQEVRMLHSLD 54
M +Y +G+G ++ Y+ T E FA K V KS QK K+ E+ + SLD
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
+P+V+ F+ ++E +++VLE C L+ L ++ + E R + ++ +QYLH+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+I+ DLK N+ L+++ K+ DFGLA K+ + ++ CGTP Y+APE+
Sbjct: 161 NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL-----CGTPNYIAPEVLC 215
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
+ G HS+ D+W LGC+LY G+PPF + I A LI
Sbjct: 216 KKG-HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA-LI 273
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLP 267
+L DP R ++L F+ + PM LP
Sbjct: 274 RRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 16/252 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQ------EVRMLHSLD 54
+ + I +G G + V+ R + Y+A+K + K ++ Q E ML +
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP ++R + ++ + ++++++Y GG+L SLLR+ + P + A ++ AL+YLHS
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 124
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K IIY DLKP NILLD+NG K+ DFG A+ + D + CGTP Y+APE+
Sbjct: 125 KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT--------YXLCGTPDYIAPEVVS 176
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
++ + D W G ++YE AG PF + + IL +L+
Sbjct: 177 TKP-YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDV-KDLL 234
Query: 235 NSLLVKDPAQRL 246
+ L+ +D +QRL
Sbjct: 235 SRLITRDLSQRL 246
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 135/273 (49%), Gaps = 13/273 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS------QKSKVLQEVRMLHSLD 54
M +Y +G+G ++ Y+ T E FA K V KS QK K+ E+ + SLD
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
+P+V+ F+ ++E +++VLE C L+ L ++ + E R + ++ +QYLH+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+I+ DLK N+ L+++ K+ DFGLA K+ + + CGTP Y+APE+
Sbjct: 161 NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL-----CGTPNYIAPEVLC 215
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
+ G HS+ D+W LGC+LY G+PPF + I A LI
Sbjct: 216 KKG-HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA-LI 273
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLP 267
+L DP R ++L F+ + PM LP
Sbjct: 274 RRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 134/254 (52%), Gaps = 17/254 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRK---KKTIEYFAIKSVDKSQKSKVLQEVR------MLHS 52
+Q+ + + +G+G + V+ +K + +A+K + K+ KV VR +L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKAT-LKVRDRVRTKMERDILVE 82
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
++HP +++ + ++T L+L+L++ GGDL + L ++ E+ ++ +L AL +L
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL 172
HS GIIY DLKP NILLDE G KL DFGL+++ D K S CGT YMAPE+
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF-----CGTVEYMAPEV 197
Query: 173 FEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFAN 232
G H+ ++D W G +++E G PF G++ + + IL +
Sbjct: 198 VNRRG-HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEA-QS 255
Query: 233 LINSLLVKDPAQRL 246
L+ L ++PA RL
Sbjct: 256 LLRMLFKRNPANRL 269
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 135/273 (49%), Gaps = 13/273 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS------QKSKVLQEVRMLHSLD 54
M +Y +G+G ++ Y+ T E FA K V KS QK K+ E+ + SLD
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
+P+V+ F+ ++E +++VLE C L+ L ++ + E R + ++ +QYLH+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+I+ DLK N+ L+++ K+ DFGLA K+ + + CGTP Y+APE+
Sbjct: 161 NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL-----CGTPNYIAPEVLC 215
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
+ G HS+ D+W LGC+LY G+PPF + I A LI
Sbjct: 216 KKG-HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA-LI 273
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLP 267
+L DP R ++L F+ + PM LP
Sbjct: 274 RRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 134/254 (52%), Gaps = 17/254 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRK---KKTIEYFAIKSVDKSQKSKVLQEVR------MLHS 52
+Q+ + + +G+G + V+ +K + +A+K + K+ KV VR +L
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKAT-LKVRDRVRTKMERDILVE 83
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
++HP +++ + ++T L+L+L++ GGDL + L ++ E+ ++ +L AL +L
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 143
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL 172
HS GIIY DLKP NILLDE G KL DFGL+++ D K S CGT YMAPE+
Sbjct: 144 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF-----CGTVEYMAPEV 198
Query: 173 FEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFAN 232
G H+ ++D W G +++E G PF G++ + + IL +
Sbjct: 199 VNRRG-HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEA-QS 256
Query: 233 LINSLLVKDPAQRL 246
L+ L ++PA RL
Sbjct: 257 LLRMLFKRNPANRL 270
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 137/257 (53%), Gaps = 22/257 (8%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS------QKSKVLQEVRMLH-SL 53
+ + +++ +G+G + V+ KKT ++FAIK++ K + E R+L +
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 54 DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLH 113
+HP + + ++T +L+ V+EY GGDLM ++ ++ A +++ LQ+LH
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 136
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAK----CGTPCYMA 169
SKGI+Y DLK NILLD++G K+ DFG+ ++ +ML AK CGTP Y+A
Sbjct: 137 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKE---------NMLGDAKTNEFCGTPDYIA 187
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXX 229
PE+ G ++++ D W G +LYE G+ PF G++ +L SI
Sbjct: 188 PEIL-LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEA 246
Query: 230 FANLINSLLVKDPAQRL 246
+L+ L V++P +RL
Sbjct: 247 -KDLLVKLFVREPEKRL 262
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 135/273 (49%), Gaps = 13/273 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS------QKSKVLQEVRMLHSLD 54
M +Y +G+G ++ Y+ T E FA K V KS QK K+ E+ + SLD
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 84
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
+P+V+ F+ ++E +++VLE C L+ L ++ + E R + ++ +QYLH+
Sbjct: 85 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN 144
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+I+ DLK N+ L+++ K+ DFGLA K+ + + CGTP Y+APE+
Sbjct: 145 NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL-----CGTPNYIAPEVLC 199
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
+ G HS+ D+W LGC+LY G+PPF + I A LI
Sbjct: 200 KKG-HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA-LI 257
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLP 267
+L DP R ++L F+ + PM LP
Sbjct: 258 RRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 290
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 134/254 (52%), Gaps = 17/254 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRK---KKTIEYFAIKSVDKSQKSKVLQEVR------MLHS 52
+Q+ + + +G+G + V+ +K + +A+K + K+ KV VR +L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKAT-LKVRDRVRTKMERDILVE 82
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
++HP +++ + ++T L+L+L++ GGDL + L ++ E+ ++ +L AL +L
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL 172
HS GIIY DLKP NILLDE G KL DFGL+++ D K S CGT YMAPE+
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF-----CGTVEYMAPEV 197
Query: 173 FEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFAN 232
G H+ ++D W G +++E G PF G++ + + IL +
Sbjct: 198 VNRRG-HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEA-QS 255
Query: 233 LINSLLVKDPAQRL 246
L+ L ++PA RL
Sbjct: 256 LLRMLFKRNPANRL 269
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 132 bits (333), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + IG G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GGD+ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G K+ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 132 bits (333), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + IG G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GGD+ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G K+ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K+T +FA+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K+T +FA+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ A+ CGTP Y+APE+
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGAT--------WTLCGTPEYLAPEIIL 232
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 233 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 272
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K+T +FA+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K+T ++A+K +DK + K+ L E R+L +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+++D+ G K+ DFG A+++ K + L CGTP Y+APE+
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 212
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 137/257 (53%), Gaps = 22/257 (8%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS------QKSKVLQEVRMLH-SL 53
+ + +++ +G+G + V+ KKT ++FAIK++ K + E R+L +
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 54 DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLH 113
+HP + + ++T +L+ V+EY GGDLM ++ ++ A +++ LQ+LH
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 135
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAK----CGTPCYMA 169
SKGI+Y DLK NILLD++G K+ DFG+ ++ +ML AK CGTP Y+A
Sbjct: 136 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKE---------NMLGDAKTNXFCGTPDYIA 186
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXX 229
PE+ G ++++ D W G +LYE G+ PF G++ +L SI
Sbjct: 187 PEIL-LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEA 245
Query: 230 FANLINSLLVKDPAQRL 246
+L+ L V++P +RL
Sbjct: 246 -KDLLVKLFVREPEKRL 261
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 146
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+DE G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 147 LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 198
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 199 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF E Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIV 251
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + IG G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G K+ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K+T ++A+K +DK + K+ L E R+L +++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 152
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 204
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 205 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 244
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K+T ++A+K +DK + K+ L E R+L +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 212
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K+T ++A+K +DK + K+ L E R+L +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 212
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K+T ++A+K +DK + K+ L E R+L +++
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 232
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 233 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 272
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K+T ++A+K +DK + K+ L E R+L +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 212
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K+T ++A+K +DK + K+ L E R+L +++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 152
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 204
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 205 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 244
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 133/271 (49%), Gaps = 16/271 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G++ L++ ++ E +L AL Y HS
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRTTL-CGTLDYLPPEMI- 183
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 242
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+ LL +P+QR ++ H W T + P
Sbjct: 243 SRLLKHNPSQRPMLREVLEHP-WITANSSKP 272
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 130 bits (328), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+++D+ G K+ DFGLA+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 130 bits (328), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 133/271 (49%), Gaps = 16/271 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS A CGT Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRR-AALCGTLDYLPPEMI- 181
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 240
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+ LL +P+QR ++ H W T + P
Sbjct: 241 SRLLKHNPSQRPMLREVLEHP-WITANSSKP 270
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 130 bits (328), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 130 bits (328), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 125/221 (56%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ +G G + V + K+T ++A+K +DK + K+ L E R+ +++
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++VLEY GG++ S LR+ + E R A +V +YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G K+ DFG A+++ K + L CGTP Y+APE+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 212
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 212
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 180
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 232
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 233 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 272
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 154
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 155 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 206
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 207 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 246
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 126/251 (50%), Gaps = 15/251 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS A CGT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRR-AALCGTLDYLPPEMI- 178
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 237
Query: 235 NSLLVKDPAQR 245
+ LL +P+QR
Sbjct: 238 SRLLKHNPSQR 248
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 130 bits (327), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 130 bits (326), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 130 bits (326), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 124/251 (49%), Gaps = 15/251 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K + A+K + K+Q K + +EV + L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ S ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS A CGT Y+ PE+
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRR-AALCGTLDYLPPEMI- 178
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + K I +LI
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRI-SRVEFTFPDFVTEGARDLI 237
Query: 235 NSLLVKDPAQR 245
+ LL +P+QR
Sbjct: 238 SRLLKHNPSQR 248
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 130 bits (326), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 130 bits (326), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 133/271 (49%), Gaps = 16/271 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS + CGT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRTEL-CGTLDYLPPEMI- 178
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 237
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+ LL +P+QR ++ H W T + P
Sbjct: 238 SRLLKHNPSQRPMLREVLEHP-WITANSSKP 267
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 130 bits (326), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 129/262 (49%), Gaps = 15/262 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRR-TTLCGTLDYLPPEMI- 204
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 263
Query: 235 NSLLVKDPAQRLHWSDLCGHAF 256
+ LL +P+QR ++ H +
Sbjct: 264 SRLLKHNPSQRPMLREVLEHPW 285
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 129 bits (325), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+++D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIII 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 129 bits (325), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 132/271 (48%), Gaps = 16/271 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 83
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 143
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 144 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRTTL-CGTLDYLPPEMI- 195
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 196 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 254
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+ LL +P+QR ++ H W T + P
Sbjct: 255 SRLLKHNPSQRPMLREVLEHP-WITANSSKP 284
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 129 bits (325), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 129 bits (325), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 132/271 (48%), Gaps = 16/271 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRDDL-CGTLDYLPPEMI- 204
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 263
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+ LL +P+QR ++ H W T + P
Sbjct: 264 SRLLKHNPSQRPMLREVLEHP-WITANSSKP 293
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 129 bits (325), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+++D+ G K+ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+++D+ G ++ DFGLA+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++Y+ AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIV 251
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 132/271 (48%), Gaps = 16/271 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRTTL-CGTLDYLPPEMI- 181
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 240
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+ LL +P+QR ++ H W T + P
Sbjct: 241 SRLLKHNPSQRPMLREVLEHP-WITANSSKP 270
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+++D+ G K+ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 15/251 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRTDL-CGTLDYLPPEMI- 183
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 242
Query: 235 NSLLVKDPAQR 245
+ LL +P+QR
Sbjct: 243 SRLLKHNPSQR 253
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 132/271 (48%), Gaps = 16/271 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRTTL-CGTLDYLPPEMI- 183
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 242
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+ LL +P+QR ++ H W T + P
Sbjct: 243 SRLLKHNPSQRPMLREVLEHP-WITANSSKP 272
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 132/271 (48%), Gaps = 16/271 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRTDL-CGTLDYLPPEMI- 178
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 237
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+ LL +P+QR ++ H W T + P
Sbjct: 238 SRLLKHNPSQRPMLREVLEHP-WITANSSKP 267
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 132/271 (48%), Gaps = 16/271 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRR-TTLCGTLDYLPPEMI- 178
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 237
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+ LL +P+QR ++ H W T + P
Sbjct: 238 SRLLKHNPSQRPMLREVLEHP-WITANSSKP 267
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 132/271 (48%), Gaps = 16/271 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRR-DTLCGTLDYLPPEMI- 179
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 238
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+ LL +P+QR ++ H W T + P
Sbjct: 239 SRLLKHNPSQRPMLREVLEHP-WITANSSKP 268
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 132/271 (48%), Gaps = 16/271 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRTDL-CGTLDYLPPEMI- 179
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 238
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+ LL +P+QR ++ H W T + P
Sbjct: 239 SRLLKHNPSQRPMLREVLEHP-WITANSSKP 268
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWTL----CGTPEYLAPEIIL 212
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 15/251 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRTDL-CGTLDYLPPEMI- 178
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 237
Query: 235 NSLLVKDPAQR 245
+ LL +P+QR
Sbjct: 238 SRLLKHNPSQR 248
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 15/251 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 65
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 125
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRR-TTLCGTLDYLPPEMI- 177
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 178 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 236
Query: 235 NSLLVKDPAQR 245
+ LL +P+QR
Sbjct: 237 SRLLKHNPSQR 247
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 132/271 (48%), Gaps = 16/271 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRXXL-CGTLDYLPPEMI- 180
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 239
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+ LL +P+QR ++ H W T + P
Sbjct: 240 SRLLKHNPSQRPMLREVLEHP-WITANSSKP 269
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 212
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 125/221 (56%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P + + ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+++D+ G K+ DFG A+++ K + L CGTP Y+APE+
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 212
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 15/251 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRTTL-CGTLDYLPPEMI- 181
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 240
Query: 235 NSLLVKDPAQR 245
+ LL +P+QR
Sbjct: 241 SRLLKHNPSQR 251
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 15/251 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 70
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 130
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 131 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRR-TTLCGTLDYLPPEMI- 182
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 241
Query: 235 NSLLVKDPAQR 245
+ LL +P+QR
Sbjct: 242 SRLLKHNPSQR 252
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 128/265 (48%), Gaps = 18/265 (6%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVR-------MLHSLDHP 56
+H + IG+G + V R K ++A+K + K K +E +L ++ HP
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
++ + ++T+ L+ VL+Y GG+L L+++ E R A ++ AL YLHS
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I+Y DLKP NILLD G L DFGL ++ + + S+ CGTP Y+APE+ +
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTF-----CGTPEYLAPEVLHKQ 214
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINS 236
+ D W LG VLYE G PPF R ++ +IL +L+
Sbjct: 215 P-YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSA-RHLLEG 272
Query: 237 LLVKDPAQRLHWSD----LCGHAFW 257
LL KD +RL D + H F+
Sbjct: 273 LLQKDRTKRLGAKDDFMEIKSHVFF 297
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 15/251 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRDDL-CGTLDYLPPEMI- 181
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 240
Query: 235 NSLLVKDPAQR 245
+ LL +P+QR
Sbjct: 241 SRLLKHNPSQR 251
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 15/251 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRTXL-CGTLDYLPPEMI- 178
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 237
Query: 235 NSLLVKDPAQR 245
+ LL +P+QR
Sbjct: 238 SRLLKHNPSQR 248
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 15/251 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRXXL-CGTLDYLPPEMI- 181
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 240
Query: 235 NSLLVKDPAQR 245
+ LL +P+QR
Sbjct: 241 SRLLKHNPSQR 251
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 125/221 (56%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P + + ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+++D+ G K+ DFG A+++ K + L CGTP Y+APE+
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 212
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 212
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 145
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWTL----CGTPEYLAPEIIL 197
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 198 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 237
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 125/221 (56%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P + + ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+++D+ G K+ DFG A+++ K + L CGTP Y+APE+
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 212
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 15/251 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRXXL-CGTLDYLPPEMI- 178
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 237
Query: 235 NSLLVKDPAQR 245
+ LL +P+QR
Sbjct: 238 SRLLKHNPSQR 248
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 17/266 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKS------QKSKVLQEVRMLHSLDHPNVLRFYS 63
+G+G ++ ++ T E FA K V KS Q+ K+ E+ + SL H +V+ F+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++E + +++VLE C L+ L ++ L E R + +V QYLH +I+ DLK
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
N+ L+E+ K+ DFGLA K+ + ++ CGTP Y+APE+ + G HS+
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-----CGTPNYIAPEVLSKKG-HSFEV 198
Query: 184 DLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXX--XFANLINSLLVKD 241
D+W +GC++Y G+PPF E + L ++ L A+LI +L D
Sbjct: 199 DVWSIGCIMYTLLVGKPPF---ETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTD 255
Query: 242 PAQRLHWSDLCGHAFWRTKLTPMPLP 267
P R ++L F+ + P LP
Sbjct: 256 PTARPTINELLNDEFFTSGYIPARLP 281
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 17/266 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKS------QKSKVLQEVRMLHSLDHPNVLRFYS 63
+G+G ++ ++ T E FA K V KS Q+ K+ E+ + SL H +V+ F+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++E + +++VLE C L+ L ++ L E R + +V QYLH +I+ DLK
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
N+ L+E+ K+ DFGLA K+ + ++ CGTP Y+APE+ + G HS+
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-----CGTPNYIAPEVLSKKG-HSFEV 198
Query: 184 DLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXX--XFANLINSLLVKD 241
D+W +GC++Y G+PPF E + L ++ L A+LI +L D
Sbjct: 199 DVWSIGCIMYTLLVGKPPF---ETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTD 255
Query: 242 PAQRLHWSDLCGHAFWRTKLTPMPLP 267
P R ++L F+ + P LP
Sbjct: 256 PTARPTINELLNDEFFTSGYIPARLP 281
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + +T ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+++D+ G ++ DFG A+++ K + L CGTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP Y+AP +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEYLAPAIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 130/262 (49%), Gaps = 15/262 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R++++ A+K + K+Q K + +EV + L
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL NG K+ DFG + APSS CGT Y+ PE+
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGW------SVHAPSSRR-TTLCGTLDYLPPEMI- 182
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G PPF + + + I +LI
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI-SRVEFTFPDFVTEGARDLI 241
Query: 235 NSLLVKDPAQRLHWSDLCGHAF 256
+ LL + +QRL +++ H +
Sbjct: 242 SRLLKHNASQRLTLAEVLEHPW 263
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 130/262 (49%), Gaps = 15/262 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R++++ A+K + K+Q K + +EV + L
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL NG K+ DFG + APSS CGT Y+ PE+
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGW------SVHAPSSRR-DTLCGTLDYLPPEMI- 182
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G PPF + + + I +LI
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI-SRVEFTFPDFVTEGARDLI 241
Query: 235 NSLLVKDPAQRLHWSDLCGHAF 256
+ LL + +QRL +++ H +
Sbjct: 242 SRLLKHNASQRLTLAEVLEHPW 263
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 17/266 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKS------QKSKVLQEVRMLHSLDHPNVLRFYS 63
+G+G ++ ++ T E FA K V KS Q+ K+ E+ + SL H +V+ F+
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++E + +++VLE C L+ L ++ L E R + +V QYLH +I+ DLK
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 148
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
N+ L+E+ K+ DFGLA K+ + ++ CGTP Y+APE+ + G HS+
Sbjct: 149 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-----CGTPNYIAPEVLSKKG-HSFEV 202
Query: 184 DLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXX--XFANLINSLLVKD 241
D+W +GC++Y G+PPF E + L ++ L A+LI +L D
Sbjct: 203 DVWSIGCIMYTLLVGKPPF---ETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTD 259
Query: 242 PAQRLHWSDLCGHAFWRTKLTPMPLP 267
P R ++L F+ + P LP
Sbjct: 260 PTARPTINELLNDEFFTSGYIPARLP 285
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 124/251 (49%), Gaps = 15/251 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K+ A+K + K+Q K + +EV + L
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 63
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 123
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE+
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRR-TTLCGTLDYLPPEMI- 175
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 176 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 234
Query: 235 NSLLVKDPAQR 245
+ LL +P+QR
Sbjct: 235 SRLLKHNPSQR 245
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 127 bits (320), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 126/253 (49%), Gaps = 11/253 (4%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYS 63
E IG+G + V+KG +T + AIK +D + + + QE+ +L D V ++Y
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
Y + LW+++EY GG + LLR E I + +++++ L YLHS+ I+ D+K
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIK 147
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
+N+LL E G KL DFG+A +L+D ++ + GTP +MAPE+ ++ S A
Sbjct: 148 AANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-----GTPFWMAPEVIQQSAYDSKA- 201
Query: 184 DLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDPA 243
D+W LG E G PP +++ I F I++ L KDP+
Sbjct: 202 DIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPS 261
Query: 244 QRLHWSDLCGHAF 256
R +L H F
Sbjct: 262 FRPTAKELLKHKF 274
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 132/271 (48%), Gaps = 16/271 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ +FG + APSS CGT Y+ PE+
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFGW------SVHAPSSRRTTL-CGTLDYLPPEMI- 180
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 239
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+ LL +P+QR ++ H W T + P
Sbjct: 240 SRLLKHNPSQRPMLREVLEHP-WITANSSKP 269
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L GTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----AGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 125/251 (49%), Gaps = 15/251 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ +FG + APSS CGT Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFGW------SVHAPSSRR-TTLCGTLDYLPPEMI- 181
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 240
Query: 235 NSLLVKDPAQR 245
+ LL +P+QR
Sbjct: 241 SRLLKHNPSQR 251
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 14/253 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS---QKSKV---LQEVRMLH-SL 53
++ + +G+G + V R K+T + +A+K + K Q V + E R+L +
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 54 DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLH 113
+HP + + + ++T L+ V+E+ GGDLM +++ + E R A +++ AL +LH
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
KGIIY DLK N+LLD G KL DFG+ ++ + + CGTP Y+APE+
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKE-----GICNGVTTATFCGTPDYIAPEIL 196
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
+E ++ A D W +G +LYE G PF L ++IL +
Sbjct: 197 QE-MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDA-TGI 254
Query: 234 INSLLVKDPAQRL 246
+ S + K+P RL
Sbjct: 255 LKSFMTKNPTMRL 267
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 130/271 (47%), Gaps = 16/271 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS CGT Y+ PE
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRTTL-CGTLDYLPPEXI- 183
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG H DLW LG + YE G+PPF + + K I +LI
Sbjct: 184 EGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 242
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+ LL +P+QR ++ H W T + P
Sbjct: 243 SRLLKHNPSQRPXLREVLEHP-WITANSSKP 272
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 119/213 (55%), Gaps = 20/213 (9%)
Query: 4 YHIYEAIGRGKYSTVYKGR--------KKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDH 55
+ I + IGRG++S VY+ K ++ F + +D ++ ++E+ +L L+H
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL--MDAKARADCIKEIDLLKQLNH 91
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLR----QDNQLPEDSIRDLAQDLVRALQY 111
PNV+++Y+ + L +VLE GDL +++ Q +PE ++ L AL++
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS+ +++ D+KP+N+ + G KL D GL R S + A S++ GTP YM+PE
Sbjct: 152 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-----GTPYYMSPE 206
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
E G +++ SD+W LGC+LYE A + PF G
Sbjct: 207 RIHENG-YNFKSDIWSLGCLLYEMAALQSPFYG 238
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 4 YHIYEAIGRGKYSTVYKGRK---KKTIEYFAIKSVDKS-------QKSKVLQEVRMLHSL 53
+ + +G+G Y V++ RK T + FA+K + K+ + E +L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 54 DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLH 113
HP ++ ++T L+L+LEY GG+L L ++ ED+ ++ AL +LH
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARK-LSDASKAPSSMLPQAKCGTPCYMAPEL 172
KGIIY DLKP NI+L+ G KL DFGL ++ + D + + CGT YMAPE+
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT------VTHTFCGTIEYMAPEI 192
Query: 173 FEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFAN 232
G H+ A D W LG ++Y+ G PPF G + + IL +
Sbjct: 193 LMRSG-HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEA-RD 250
Query: 233 LINSLLVKDPAQRL-----HWSDLCGHAFWR 258
L+ LL ++ A RL ++ H F+R
Sbjct: 251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L CGTP +APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----CGTPEALAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 132/271 (48%), Gaps = 16/271 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G++ L++ ++ E +L AL Y HS
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS GT Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRXXLX-GTLDYLPPEMI- 183
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 242
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+ LL +P+QR ++ H W T + P
Sbjct: 243 SRLLKHNPSQRPMLREVLEHP-WITANSSKP 272
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 134/267 (50%), Gaps = 19/267 (7%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKS------QKSKVLQEVRMLHSLDHPNVLRFYS 63
+G+G ++ ++ T E FA K V KS Q+ K+ E+ + SL H +V+ F+
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++E + +++VLE C L+ L ++ L E R + +V QYLH +I+ DLK
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 166
Query: 124 PSNILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA 182
N+ L+E+ K+ DFGLA K+ D + + CGTP Y+APE+ + G HS+
Sbjct: 167 LGNLFLNEDLEVKIGDFGLATKVEYDGERK------KVLCGTPNYIAPEVLSKKG-HSFE 219
Query: 183 SDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXX--XFANLINSLLVK 240
D+W +GC++Y G+PPF E + L ++ L A+LI +L
Sbjct: 220 VDVWSIGCIMYTLLVGKPPF---ETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQT 276
Query: 241 DPAQRLHWSDLCGHAFWRTKLTPMPLP 267
DP R ++L F+ + P LP
Sbjct: 277 DPTARPTINELLNDEFFTSGYIPARLP 303
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 127 bits (318), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 140/287 (48%), Gaps = 26/287 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIK------SVDKSQKSKVLQEVRMLHSLD 54
+ + I AIG+G + V +K T + +A+K V++++ V +E++++ L+
Sbjct: 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE 73
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP ++ + ++ +++V++ +GGDL L+Q+ E++++ +LV AL YL +
Sbjct: 74 HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQN 133
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF- 173
+ II+ D+KP NILLDE+G + DF +A L P GT YMAPE+F
Sbjct: 134 QRIIHRDMKPDNILLDEHGHVHITDFNIAAML------PRETQITTMAGTKPYMAPEMFS 187
Query: 174 -EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFT--QLVKSILXXXXXXXXXXXXXXF 230
+G +S+A D W LG YE GR P+ R T + +
Sbjct: 188 SRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEM 247
Query: 231 ANLINSLLVKDPAQRL----------HWSDLCGHAFWRTKLTPMPLP 267
+L+ LL +P QR + +D+ A ++ +L P +P
Sbjct: 248 VSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAVFQKRLIPGFIP 294
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 127 bits (318), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 4 YHIYEAIGRGKYSTVYKGRK---KKTIEYFAIKSVDKS-------QKSKVLQEVRMLHSL 53
+ + +G+G Y V++ RK T + FA+K + K+ + E +L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 54 DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLH 113
HP ++ ++T L+L+LEY GG+L L ++ ED+ ++ AL +LH
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARK-LSDASKAPSSMLPQAKCGTPCYMAPEL 172
KGIIY DLKP NI+L+ G KL DFGL ++ + D + + CGT YMAPE+
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT------VTHXFCGTIEYMAPEI 192
Query: 173 FEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFAN 232
G H+ A D W LG ++Y+ G PPF G + + IL +
Sbjct: 193 LMRSG-HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEA-RD 250
Query: 233 LINSLLVKDPAQRL-----HWSDLCGHAFWR 258
L+ LL ++ A RL ++ H F+R
Sbjct: 251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 127 bits (318), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 134/267 (50%), Gaps = 19/267 (7%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKS------QKSKVLQEVRMLHSLDHPNVLRFYS 63
+G+G ++ ++ T E FA K V KS Q+ K+ E+ + SL H +V+ F+
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++E + +++VLE C L+ L ++ L E R + +V QYLH +I+ DLK
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 168
Query: 124 PSNILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA 182
N+ L+E+ K+ DFGLA K+ D + + CGTP Y+APE+ + G HS+
Sbjct: 169 LGNLFLNEDLEVKIGDFGLATKVEYDGERK------KVLCGTPNYIAPEVLSKKG-HSFE 221
Query: 183 SDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX--XXXXXXFANLINSLLVK 240
D+W +GC++Y G+PPF E + L ++ L A+LI +L
Sbjct: 222 VDVWSIGCIMYTLLVGKPPF---ETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQT 278
Query: 241 DPAQRLHWSDLCGHAFWRTKLTPMPLP 267
DP R ++L F+ + P LP
Sbjct: 279 DPTARPTINELLNDEFFTSGYIPARLP 305
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 124/251 (49%), Gaps = 11/251 (4%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG+G + VYKG T E AIK +D + + + QE+ +L D P + R++ Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPS 125
S LW+++EY GG + LL+ L E I + +++++ L YLHS+ I+ D+K +
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAA 145
Query: 126 NILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDL 185
N+LL E G KL DFG+A +L+D + + GTP +MAPE+ ++ + + +D+
Sbjct: 146 NVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-----GTPFWMAPEVIKQSA-YDFKADI 199
Query: 186 WGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDPAQR 245
W LG E G PP +++ I F + + L KDP R
Sbjct: 200 WSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFR 259
Query: 246 LHWSDLCGHAF 256
+L H F
Sbjct: 260 PTAKELLKHKF 270
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 134/267 (50%), Gaps = 19/267 (7%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKS------QKSKVLQEVRMLHSLDHPNVLRFYS 63
+G+G ++ ++ T E FA K V KS Q+ K+ E+ + SL H +V+ F+
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++E + +++VLE C L+ L ++ L E R + +V QYLH +I+ DLK
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 142
Query: 124 PSNILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA 182
N+ L+E+ K+ DFGLA K+ D + + CGTP Y+APE+ + G HS+
Sbjct: 143 LGNLFLNEDLEVKIGDFGLATKVEYDGERK------KVLCGTPNYIAPEVLSKKG-HSFE 195
Query: 183 SDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXX--XFANLINSLLVK 240
D+W +GC++Y G+PPF E + L ++ L A+LI +L
Sbjct: 196 VDVWSIGCIMYTLLVGKPPF---ETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQT 252
Query: 241 DPAQRLHWSDLCGHAFWRTKLTPMPLP 267
DP R ++L F+ + P LP
Sbjct: 253 DPTARPTINELLNDEFFTSGYIPARLP 279
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV------LQEVRMLHSLD 54
++Q+ + +G G + V + K++ ++A+K +DK + K+ L E R+L +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
P +++ ++ +++L++V+EY GG++ S LR+ + E R A +V +YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+IY DLKP N+L+D+ G ++ DFG A+++ K + L GTP Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXL----XGTPEYLAPEIIL 211
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G ++ A D W LG ++YE AG PPF + Q+ + I+
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 133/270 (49%), Gaps = 19/270 (7%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS---QKSKV---LQEVRMLHSLD 54
+ ++ +G+G + V +K T E +AIK + K Q V + E R+L LD
Sbjct: 18 LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD 77
Query: 55 HPNVL-RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLH 113
P L + +S ++T L+ V+EY GGDLM ++Q + E A ++ L +LH
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLH 137
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
+GIIY DLK N++LD G K+ DFG+ ++ + + CGTP Y+APE+
Sbjct: 138 KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-----HMMDGVTTREFCGTPDYIAPEII 192
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
+ + D W G +LYE AG+PPF G + +L +SI+ ++
Sbjct: 193 AYQP-YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEA-VSI 250
Query: 234 INSLLVKDPAQRLHWS-----DLCGHAFWR 258
L+ K PA+RL D+ HAF+R
Sbjct: 251 CKGLMTKHPAKRLGCGPEGERDVREHAFFR 280
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 131/271 (48%), Gaps = 16/271 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
+ + I +G+GK+ VY R+K++ A+K + K+Q K + +EV + L
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y ++ + ++L+LEY G + L++ ++ E +L AL Y HS
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + APSS GT Y+ PE+
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGW------SCHAPSSRR-TTLSGTLDYLPPEMI- 179
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H DLW LG + YE G+PPF + + K I +LI
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLI 238
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+ LL +P+QR ++ H W T + P
Sbjct: 239 SRLLKHNPSQRPMLREVLEHP-WITANSSKP 268
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 136/277 (49%), Gaps = 35/277 (12%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHS 52
+ Y + E +G G+++ V K R+K T + +A K + K + + ++ +EV +L
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ HPN++ + +E + L+LE GG+L L + L ED + ++ + YL
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 124
Query: 113 HSKGIIYCDLKPSNI-LLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
HSK I + DLKP NI LLD+ N R KL DFG+A K+ ++ + GTP ++
Sbjct: 125 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF------GTPEFV 178
Query: 169 APEL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXX 226
APE+ +E G+ +D+W +G + Y +G PF+G + + L
Sbjct: 179 APEIVNYEPLGLE---ADMWSIGVITYILLSGASPFLG----ETKQETLTNISAVNYDFD 231
Query: 227 XXXFAN-------LINSLLVKDPAQRLHWSDLCGHAF 256
F+N I LLVKDP +R+ + H++
Sbjct: 232 EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSW 268
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 126/253 (49%), Gaps = 11/253 (4%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYS 63
E IG+G + V+KG +T + AIK +D + + + QE+ +L D P V ++Y
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
Y LW+++EY GG + LL + L E I + +++++ L YLHS+ I+ D+K
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 151
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
+N+LL E+G KL DFG+A +L+D ++ + GTP +MAPE+ ++ S A
Sbjct: 152 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-----GTPFWMAPEVIKQSAYDSKA- 205
Query: 184 DLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDPA 243
D+W LG E G PP +++ I + + L K+P+
Sbjct: 206 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPS 265
Query: 244 QRLHWSDLCGHAF 256
R +L H F
Sbjct: 266 FRPTAKELLKHKF 278
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 136/277 (49%), Gaps = 35/277 (12%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHS 52
+ Y + E +G G+++ V K R+K T + +A K + K + + ++ +EV +L
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ HPN++ + +E + L+LE GG+L L + L ED + ++ + YL
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 131
Query: 113 HSKGIIYCDLKPSNI-LLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
HSK I + DLKP NI LLD+ N R KL DFG+A K+ ++ + GTP ++
Sbjct: 132 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF------GTPEFV 185
Query: 169 APEL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXX 226
APE+ +E G+ +D+W +G + Y +G PF+G + + L
Sbjct: 186 APEIVNYEPLGLE---ADMWSIGVITYILLSGASPFLG----ETKQETLTNISAVNYDFD 238
Query: 227 XXXFAN-------LINSLLVKDPAQRLHWSDLCGHAF 256
F+N I LLVKDP +R+ + H++
Sbjct: 239 EEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSW 275
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 136/277 (49%), Gaps = 35/277 (12%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHS 52
+ Y + E +G G+++ V K R+K T + +A K + K + + ++ +EV +L
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ HPN++ + +E + L+LE GG+L L + L ED + ++ + YL
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 145
Query: 113 HSKGIIYCDLKPSNI-LLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
HSK I + DLKP NI LLD+ N R KL DFG+A K+ ++ + GTP ++
Sbjct: 146 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF------GTPEFV 199
Query: 169 APEL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXX 226
APE+ +E G+ +D+W +G + Y +G PF+G + + L
Sbjct: 200 APEIVNYEPLGLE---ADMWSIGVITYILLSGASPFLG----ETKQETLTNISAVNYDFD 252
Query: 227 XXXFAN-------LINSLLVKDPAQRLHWSDLCGHAF 256
F+N I LLVKDP +R+ + H++
Sbjct: 253 EEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSW 289
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 27/283 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHS 52
+ Y E +G G+++ V K R+K T +A K + K + + + +EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ HPNV+ + YE + L+LE GG+L L + L E+ + + ++ + YL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 113 HSKGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
HS I + DLKP NI LLD N R K+ DFGLA K+ ++ + GTP ++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF------GTPAFV 184
Query: 169 APEL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXX 223
APE+ +E G+ +D+W +G + Y +G PF+G +E V ++
Sbjct: 185 APEIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 224 XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
+ I LLVKDP +R+ D H + + K T L
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 126/253 (49%), Gaps = 11/253 (4%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYS 63
E IG+G + V+KG +T + AIK +D + + + QE+ +L D P V ++Y
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
Y LW+++EY GG + LL + L E I + +++++ L YLHS+ I+ D+K
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
+N+LL E+G KL DFG+A +L+D ++ + GTP +MAPE+ ++ S A
Sbjct: 132 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-----GTPFWMAPEVIKQSAYDSKA- 185
Query: 184 DLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDPA 243
D+W LG E G PP +++ I + + L K+P+
Sbjct: 186 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPS 245
Query: 244 QRLHWSDLCGHAF 256
R +L H F
Sbjct: 246 FRPTAKELLKHKF 258
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 125/253 (49%), Gaps = 11/253 (4%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYS 63
E IG+G + V+KG +T + AIK +D + + + QE+ +L D P V ++Y
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
Y LW+++EY GG + LL + L E I + +++++ L YLHS+ I+ D+K
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 146
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
+N+LL E+G KL DFG+A +L+D + + GTP +MAPE+ ++ S A
Sbjct: 147 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-----GTPFWMAPEVIKQSAYDSKA- 200
Query: 184 DLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDPA 243
D+W LG E G PP +++ I + + L K+P+
Sbjct: 201 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPS 260
Query: 244 QRLHWSDLCGHAF 256
R +L H F
Sbjct: 261 FRPTAKELLKHKF 273
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 123 bits (308), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 135/283 (47%), Gaps = 27/283 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHS 52
+ Y E +G GK++ V K R+K T +A K + K + + + +EV +L
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ HPNV+ + YE + L+LE GG+L L + L E+ + + ++ + YL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 113 HSKGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
HS I + DLKP NI LLD N R K+ DFGLA K+ ++ + GTP ++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF------GTPEFV 184
Query: 169 APEL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXX 223
APE+ +E G+ +D+W +G + Y +G PF+G +E V ++
Sbjct: 185 APEIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 224 XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
+ I LLVKDP +R+ D H + + K T L
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 123 bits (308), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 125/253 (49%), Gaps = 11/253 (4%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYS 63
E IG+G + V+KG +T + AIK +D + + + QE+ +L D P V ++Y
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
Y LW+++EY GG + LL + L E I + +++++ L YLHS+ I+ D+K
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
+N+LL E+G KL DFG+A +L+D + + GTP +MAPE+ ++ S A
Sbjct: 132 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-----GTPFWMAPEVIKQSAYDSKA- 185
Query: 184 DLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVKDPA 243
D+W LG E G PP +++ I + + L K+P+
Sbjct: 186 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPS 245
Query: 244 QRLHWSDLCGHAF 256
R +L H F
Sbjct: 246 FRPTAKELLKHKF 258
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 122 bits (307), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 27/283 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHS 52
+ Y E +G G+++ V K R+K T +A K + K + + + +EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ HPNV+ + YE + L+LE GG+L L + L E+ + + ++ + YL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 113 HSKGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
HS I + DLKP NI LLD N R K+ DFGLA K+ ++ + GTP ++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF------GTPEFV 184
Query: 169 APEL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXX 223
APE+ +E G+ +D+W +G + Y +G PF+G +E V ++
Sbjct: 185 APEIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 224 XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
+ I LLVKDP +R+ D H + + K T L
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 16/274 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
++ + I +G+GK+ VY R+K+ A+K + KSQ K + +E+ + L
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y+++ ++L+LE+ G+L L++ + E ++L AL Y H
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 132
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+ +I+ D+KP N+L+ G K+ DFG + AP S+ + CGT Y+ PE+
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGW------SVHAP-SLRRRXMCGTLDYLPPEMI- 184
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG H DLW G + YE G PPF T+ + I+ +LI
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGS-KDLI 243
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
+ LL P QRL + H W + LPP
Sbjct: 244 SKLLRYHPPQRLPLKGVMEHP-WVKANSRRVLPP 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 27/283 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHS 52
+ Y E +G G+++ V K R+K T +A K + K + + + +EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ HPNV+ + YE + L+LE GG+L L + L E+ + + ++ + YL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 113 HSKGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
HS I + DLKP NI LLD N R K+ DFGLA K+ ++ + GTP ++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF------GTPEFV 184
Query: 169 APEL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXX 223
APE+ +E G+ +D+W +G + Y +G PF+G +E V ++
Sbjct: 185 APEIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 224 XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
+ I LLVKDP +R+ D H + + K T L
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 27/283 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHS 52
+ Y E +G G+++ V K R+K T +A K + K + + + +EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ HPNV+ + YE + L+LE GG+L L + L E+ + + ++ + YL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 113 HSKGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
HS I + DLKP NI LLD N R K+ DFGLA K+ ++ + GTP ++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF------GTPEFV 184
Query: 169 APEL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXX 223
APE+ +E G+ +D+W +G + Y +G PF+G +E V ++
Sbjct: 185 APEIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 224 XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
+ I LLVKDP +R+ D H + + K T L
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 137/274 (50%), Gaps = 16/274 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
++ + I +G+GK+ VY R+KK+ A+K + KSQ K + +E+ + L
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y+++ ++L+LEY G+L L++ E + ++L AL Y H
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHG 141
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K +I+ D+KP N+LL G K+ DFG + AP S+ + CGT Y+ PE+
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGW------SVHAP-SLRRKTMCGTLDYLPPEMI- 193
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG +H+ DLW +G + YE G PPF + + I+ +LI
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGA-QDLI 252
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
+ LL +P++RL + + H + R + LPP
Sbjct: 253 SKLLRHNPSERLPLAQVSAHPWVRANSRRV-LPP 285
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 17/253 (6%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDK----SQKSKVLQEVRMLHSLDHPNVL 59
Y + +G G +S V K+T + AIK + K ++ + E+ +LH + HPN++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
YE+ HL+L+++ GG+L + + E L ++ A++YLH GI++
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 120 CDLKPSNIL---LDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
DLKP N+L LDE+ + + DFGL+ K+ D P S+L A CGTP Y+APE+ +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLS-KMED----PGSVLSTA-CGTPGYVAPEVLAQ- 192
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX---XXXXXXFANL 233
+S A D W +G + Y G PPF +L + IL +
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 234 INSLLVKDPAQRL 246
I L+ KDP +R
Sbjct: 253 IRHLMEKDPEKRF 265
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 27/283 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHS 52
+ Y E +G G+++ V K R+K T +A K + K + + + +EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ HPNV+ + YE + L+LE GG+L L + L E+ + + ++ + YL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 113 HSKGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
HS I + DLKP NI LLD N R K+ DFGLA K+ ++ + GTP ++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF------GTPEFV 184
Query: 169 APEL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXX 223
APE+ +E G+ +D+W +G + Y +G PF+G +E V ++
Sbjct: 185 APEIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 224 XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
+ I LLVKDP +R+ D H + + K T L
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 17/253 (6%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDK----SQKSKVLQEVRMLHSLDHPNVL 59
Y + +G G +S V K+T + AIK + K ++ + E+ +LH + HPN++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
YE+ HL+L+++ GG+L + + E L ++ A++YLH GI++
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 120 CDLKPSNIL---LDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
DLKP N+L LDE+ + + DFGL+ K+ D P S+L A CGTP Y+APE+ +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLS-KMED----PGSVLSTA-CGTPGYVAPEVLAQK 193
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX---XXXXXXFANL 233
+S A D W +G + Y G PPF +L + IL +
Sbjct: 194 P-YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 234 INSLLVKDPAQRL 246
I L+ KDP +R
Sbjct: 253 IRHLMEKDPEKRF 265
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 17/253 (6%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDK----SQKSKVLQEVRMLHSLDHPNVL 59
Y + +G G +S V K+T + AIK + K ++ + E+ +LH + HPN++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
YE+ HL+L+++ GG+L + + E L ++ A++YLH GI++
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 120 CDLKPSNIL---LDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
DLKP N+L LDE+ + + DFGL+ K+ D P S+L A CGTP Y+APE+ +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLS-KMED----PGSVLSTA-CGTPGYVAPEVLAQK 193
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX---XXXXXXFANL 233
+S A D W +G + Y G PPF +L + IL +
Sbjct: 194 P-YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 234 INSLLVKDPAQRL 246
I L+ KDP +R
Sbjct: 253 IRHLMEKDPEKRF 265
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 17/253 (6%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDK----SQKSKVLQEVRMLHSLDHPNVL 59
Y + +G G +S V K+T + AIK + K ++ + E+ +LH + HPN++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
YE+ HL+L+++ GG+L + + E L ++ A++YLH GI++
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 120 CDLKPSNIL---LDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
DLKP N+L LDE+ + + DFGL+ K+ D P S+L A CGTP Y+APE+ +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLS-KMED----PGSVLSTA-CGTPGYVAPEVLAQK 193
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX---XXXXXXFANL 233
+S A D W +G + Y G PPF +L + IL +
Sbjct: 194 P-YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 234 INSLLVKDPAQRL 246
I L+ KDP +R
Sbjct: 253 IRHLMEKDPEKRF 265
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 27/283 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHS 52
+ Y E +G G+++ V K R+K T +A K + K + + + +EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ HPNV+ + YE + L+LE GG+L L + L E+ + + ++ + YL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 113 HSKGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
HS I + DLKP NI LLD N R K+ DFGLA K+ ++ + GTP ++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF------GTPEFV 184
Query: 169 APEL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXX 223
APE+ +E G+ +D+W +G + Y +G PF+G +E V ++
Sbjct: 185 APEIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 224 XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
+ I LLVKDP +R+ D H + + K T L
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 16/274 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
++ + I +G+GK+ VY R+K+ A+K + KSQ K + +E+ + L
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y+++ ++L+LE+ G+L L++ + E ++L AL Y H
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 133
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+ +I+ D+KP N+L+ G K+ DFG + AP S+ + CGT Y+ PE+
Sbjct: 134 RKVIHRDIKPENLLMGYKGELKIADFGW------SVHAP-SLRRRXMCGTLDYLPPEMI- 185
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG H DLW G + YE G PPF T+ + I+ +LI
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGS-KDLI 244
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
+ LL P QRL + H W + LPP
Sbjct: 245 SKLLRYHPPQRLPLKGVMEHP-WVKANSRRVLPP 277
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 16/274 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLD 54
++ + I +G+GK+ VY R+K+ A+K + KSQ K + +E+ + L
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN+LR Y+++ ++L+LE+ G+L L++ + E ++L AL Y H
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 132
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+ +I+ D+KP N+L+ G K+ DFG + AP S+ + CGT Y+ PE+
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGW------SVHAP-SLRRRXMCGTLDYLPPEMI- 184
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
EG H DLW G + YE G PPF T+ + I+ +LI
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGS-KDLI 243
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
+ LL P QRL + H W + LPP
Sbjct: 244 SKLLRYHPPQRLPLKGVMEHP-WVKANSRRVLPP 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 27/283 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHS 52
+ Y E +G G+++ V K R+K T +A K + K + + + +EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ HPNV+ + YE + L+LE GG+L L + L E+ + + ++ + YL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 113 HSKGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
HS I + DLKP NI LLD N R K+ DFGLA K+ ++ + GTP ++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF------GTPEFV 184
Query: 169 APEL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXX 223
APE+ +E G+ +D+W +G + Y +G PF+G +E V ++
Sbjct: 185 APEIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 224 XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
+ I LLVKDP +R+ D H + + K T L
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 124/260 (47%), Gaps = 9/260 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDK----SQKSKVLQEVRMLHSLDHP 56
+ Y ++E IG G ++ V T E AIK +DK S ++ E+ L +L H
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQ 68
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
++ + Y ET+ +++VLEYC GG+L + ++L E+ R + + +V A+ Y+HS+G
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQG 128
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
+ DLKP N+L DE + KL DFGL K K Q CG+ Y APEL +
Sbjct: 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAK----PKGNKDYHLQTCCGSLAYAAPELIQGK 184
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINS 236
+D+W +G +LY G PF L K I+ L+
Sbjct: 185 SYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSIL-LLQQ 243
Query: 237 LLVKDPAQRLHWSDLCGHAF 256
+L DP +R+ +L H +
Sbjct: 244 MLQVDPKKRISMKNLLNHPW 263
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 27/283 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHS 52
+ Y E +G G+++ V K R+K T +A K + K + + + +EV +L
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ HPNV+ + YE + L+LE GG+L L + L E+ + + ++ + YL
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 129
Query: 113 HSKGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
HS I + DLKP NI LLD N R K+ DFGLA K+ ++ + GTP ++
Sbjct: 130 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF------GTPEFV 183
Query: 169 APEL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXX 223
APE+ +E G+ +D+W +G + Y +G PF+G +E V ++
Sbjct: 184 APEIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 240
Query: 224 XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
+ I LLVKDP +R+ D H + + K T L
Sbjct: 241 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 283
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 27/283 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHS 52
+ Y E +G G+++ V K R+K T +A K + K + + + +EV +L
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ HPNV+ + YE + L+LE GG+L L + L E+ + + ++ + YL
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 129
Query: 113 HSKGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
HS I + DLKP NI LLD N R K+ DFGLA K+ ++ + GTP ++
Sbjct: 130 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF------GTPEFV 183
Query: 169 APEL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXX 223
APE+ +E G+ +D+W +G + Y +G PF+G +E V ++
Sbjct: 184 APEIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 240
Query: 224 XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
+ I LLVKDP +R+ D H + + K T L
Sbjct: 241 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 283
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 21/271 (7%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS--QKSKVLQEVRMLHSLDHP-NVLR 60
+ + E +G G Y VYKGR KT + AIK +D + ++ ++ QE+ ML H N+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 61 FYSWY------ETSAHLWLVLEYCVGGDLMSLLR--QDNQLPEDSIRDLAQDLVRALQYL 112
+Y + LWLV+E+C G + L++ + N L E+ I + ++++R L +L
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL 172
H +I+ D+K N+LL EN KL DFG++ +L ++ + GTP +MAPE+
Sbjct: 146 HQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-----GTPYWMAPEV 200
Query: 173 F----EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSI-LXXXXXXXXXXXX 227
+ + SDLW LG E G PP + + I
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWS 260
Query: 228 XXFANLINSLLVKDPAQRLHWSDLCGHAFWR 258
F + I S LVK+ +QR L H F R
Sbjct: 261 KKFQSFIESCLVKNHSQRPATEQLMKHPFIR 291
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 16/211 (7%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS-----QKSKVLQEVRMLHSL-- 53
MN + ++ IGRG + VY RK T + +A+K +DK Q + R++ SL
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 54 --DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
D P ++ + T L +L+ GGDL L Q E +R A +++ L++
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+H++ ++Y DLKP+NILLDE+G ++ D GLA D SK P A GT YMAPE
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKK----PHASVGTHGYMAPE 360
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
+ ++G + ++D + LGC+L++ G PF
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 16/211 (7%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS-----QKSKVLQEVRMLHSL-- 53
MN + ++ IGRG + VY RK T + +A+K +DK Q + R++ SL
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 246
Query: 54 --DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
D P ++ + T L +L+ GGDL L Q E +R A +++ L++
Sbjct: 247 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 306
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+H++ ++Y DLKP+NILLDE+G ++ D GLA D SK P A GT YMAPE
Sbjct: 307 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKK----PHASVGTHGYMAPE 359
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
+ ++G + ++D + LGC+L++ G PF
Sbjct: 360 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 16/211 (7%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS-----QKSKVLQEVRMLHSL-- 53
MN + ++ IGRG + VY RK T + +A+K +DK Q + R++ SL
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 54 --DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
D P ++ + T L +L+ GGDL L Q E +R A +++ L++
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+H++ ++Y DLKP+NILLDE+G ++ D GLA D SK P A GT YMAPE
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKK----PHASVGTHGYMAPE 360
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
+ ++G + ++D + LGC+L++ G PF
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 16/211 (7%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS-----QKSKVLQEVRMLHSL-- 53
MN + ++ IGRG + VY RK T + +A+K +DK Q + R++ SL
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 54 --DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
D P ++ + T L +L+ GGDL L Q E +R A +++ L++
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+H++ ++Y DLKP+NILLDE+G ++ D GLA D SK P A GT YMAPE
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKK----PHASVGTHGYMAPE 360
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
+ ++G + ++D + LGC+L++ G PF
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHS 52
+ Y E +G G+++ V K R+K T +A K + K + + + +EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ HPNV+ + YE + L+LE GG+L L + L E+ + + ++ + YL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 113 HSKGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
HS I + DLKP NI LLD N R K+ DFGLA K+ ++ + GTP ++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF------GTPEFV 184
Query: 169 APEL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXX 223
APE+ +E G+ +D+W +G + Y +G PF+G +E V ++
Sbjct: 185 APEIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 224 XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTK 260
+ I LLVKDP +R+ D H + + K
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 131/277 (47%), Gaps = 22/277 (7%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK--SKVLQEVRMLHSLDHPNVL 59
++Y + + IG G + R K++ E A+K +++ +K + V +E+ SL HPN++
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIV 78
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
RF T HL +V+EY GG+L + + ED R Q L+ + Y H+ + +
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 120 CDLKPSNILLDEN--GRTKLCDFGLARKLSDASKAPSSML---PQAKCGTPCYMAPELFE 174
DLK N LLD + R K+CDFG ++ SS+L P++ GTP Y+APE+
Sbjct: 139 RDLKLENTLLDGSPAPRLKICDFGYSK---------SSVLHSQPKSTVGTPAYIAPEVLL 189
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGRE----FTQLVKSILXXXXXX-XXXXXXXX 229
+ +D+W G LY G PF E F + + IL
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 230 FANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
+LI+ + V DPA+R+ ++ H W K P L
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHE-WFLKNLPADL 285
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 134/283 (47%), Gaps = 27/283 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHS 52
+ Y E +G G ++ V K R+K T +A K + K + + + +EV +L
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ HPNV+ + YE + L+LE GG+L L + L E+ + + ++ + YL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 113 HSKGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
HS I + DLKP NI LLD N R K+ DFGLA K+ ++ + GTP ++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF------GTPEFV 184
Query: 169 APEL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXX 223
APE+ +E G+ +D+W +G + Y +G PF+G +E V ++
Sbjct: 185 APEIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 224 XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
+ I LLVKDP +R+ D H + + K T L
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 27/273 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHS 52
+ Y E +G G+++ V K R+K T +A K + K + + + +EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ HPNV+ + YE + L+LE GG+L L + L E+ + + ++ + YL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 113 HSKGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
HS I + DLKP NI LLD N R K+ DFGLA K+ ++ + GTP ++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF------GTPEFV 184
Query: 169 APEL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXX 223
APE+ +E G+ +D+W +G + Y +G PF+G +E V ++
Sbjct: 185 APEIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 224 XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAF 256
+ I LLVKDP +R+ D H +
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 120 bits (300), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 22/277 (7%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK--SKVLQEVRMLHSLDHPNVL 59
++Y + + IG G + R K++ E A+K +++ +K V +E+ SL HPN++
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIV 77
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
RF T HL +V+EY GG+L + + ED R Q L+ + Y H+ + +
Sbjct: 78 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 137
Query: 120 CDLKPSNILLDEN--GRTKLCDFGLARKLSDASKAPSSML---PQAKCGTPCYMAPELFE 174
DLK N LLD + R K+CDFG ++ SS+L P++ GTP Y+APE+
Sbjct: 138 RDLKLENTLLDGSPAPRLKICDFGYSK---------SSVLHSQPKSTVGTPAYIAPEVLL 188
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGRE----FTQLVKSILXXXXXX-XXXXXXXX 229
+ +D+W G LY G PF E F + + IL
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 248
Query: 230 FANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
+LI+ + V DPA+R+ ++ H W K P L
Sbjct: 249 CRHLISRIFVADPAKRISIPEIRNHE-WFLKNLPADL 284
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 119 bits (299), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 129/280 (46%), Gaps = 28/280 (10%)
Query: 1 MNQYHIYE-AIGRGKYS----TVYKG----RKKKTIEYFAIKSVDKSQKSKVLQEVRMLH 51
+NQY+ E IGRG + V KG R K I + ++ VD+ + QE+ ++
Sbjct: 24 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK-----QEIEIMK 78
Query: 52 SLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
SLDHPN++R Y +E + ++LV+E C GG+L + E + +D++ A+ Y
Sbjct: 79 SLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 138
Query: 112 LHSKGIIYCDLKPSNILL---DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
H + + DLKP N L + KL DFGLA + P M+ + K GTP Y+
Sbjct: 139 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-----PGKMM-RTKVGTPYYV 192
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF---VGREFTQLVKSILXXXXXXXXXX 225
+P++ E G++ D W G ++Y G PPF E ++
Sbjct: 193 SPQVLE--GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLN 250
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+LI LL K P QR+ H ++ +L+ P
Sbjct: 251 VSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSP 290
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 119 bits (299), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 129/280 (46%), Gaps = 28/280 (10%)
Query: 1 MNQYHIYE-AIGRGKYS----TVYKG----RKKKTIEYFAIKSVDKSQKSKVLQEVRMLH 51
+NQY+ E IGRG + V KG R K I + ++ VD+ + QE+ ++
Sbjct: 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK-----QEIEIMK 61
Query: 52 SLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
SLDHPN++R Y +E + ++LV+E C GG+L + E + +D++ A+ Y
Sbjct: 62 SLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 121
Query: 112 LHSKGIIYCDLKPSNILL---DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
H + + DLKP N L + KL DFGLA + P M+ + K GTP Y+
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-----PGKMM-RTKVGTPYYV 175
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF---VGREFTQLVKSILXXXXXXXXXX 225
+P++ E G++ D W G ++Y G PPF E ++
Sbjct: 176 SPQVLE--GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLN 233
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
+LI LL K P QR+ H ++ +L+ P
Sbjct: 234 VSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSP 273
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 119 bits (299), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 26/223 (11%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVD-----KSQKSKVLQEVRMLHSLDHPNV 58
Y + IG G Y K R+K + K +D +++K ++ EV +L L HPN+
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 59 LRFYSWY--ETSAHLWLVLEYCVGGDLMSLL----RQDNQLPEDSIRDLAQDLVRALQYL 112
+R+Y T+ L++V+EYC GGDL S++ ++ L E+ + + L AL+
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 113 HSKG-----IIYCDLKPSNILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPC 166
H + +++ DLKP+N+ LD KL DFGLAR L+ D S A +A GTP
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA------KAFVGTPY 181
Query: 167 YMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQ 209
YM+PE ++ SD+W LGC+LYE A PPF F+Q
Sbjct: 182 YMSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTA--FSQ 221
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 14/249 (5%)
Query: 4 YHIYEAIGRG-----KYSTVYKGRKKKTIEYFAIKSVDKSQ-KSKVLQEVRMLHSLDHPN 57
Y I E +G G K +T YK ++K +++ + + + KS +V +E+ L L HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
+++ Y T + +V+EY GG+L + + ++ ED R Q ++ A++Y H I
Sbjct: 71 IIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
++ DLKP N+LLD+N K+ DFGL+ ++D + +S CG+P Y APE+
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS------CGSPNYAAPEVINGKL 183
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSL 237
D+W G VLY GR PF L K + +LI +
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV-NSCVYVMPDFLSPGAQSLIRRM 242
Query: 238 LVKDPAQRL 246
+V DP QR+
Sbjct: 243 IVADPMQRI 251
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 16/266 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD--KSQKSKVL-QEVRMLHSLDHPNVLRFYSWYE 66
IG G V +K T + A+K +D K Q+ ++L EV ++ H NV+ YS Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 67 TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSN 126
LW+V+E+ GG L ++ ++ E+ I + ++RAL YLH++G+I+ D+K +
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDS 171
Query: 127 ILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAK--CGTPCYMAPELFEEGGVHSYASD 184
ILL +GR KL DFG ++S +P+ K GTP +MAPE+ + D
Sbjct: 172 ILLTSDGRIKLSDFGFCAQVSKE-------VPKRKXLVGTPYWMAPEVISRLP-YGTEVD 223
Query: 185 LWGLGCVLYECYAGRPPFVGREFTQLVKSILXXX--XXXXXXXXXXXFANLINSLLVKDP 242
+W LG ++ E G PP+ Q ++ I ++ +LV++P
Sbjct: 224 IWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREP 283
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPP 268
+QR +L GH F + P + P
Sbjct: 284 SQRATAQELLGHPFLKLAGPPSCIVP 309
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 139/304 (45%), Gaps = 48/304 (15%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRK---KKTIEYFAIKSVDKS---QKSKVLQEVR-----M 49
+ + + + +G G Y V+ RK T + +A+K + K+ QK+K + R +
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 50 LHSLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
H P ++ + ++T L L+L+Y GG+L + L Q + E ++ ++V AL
Sbjct: 113 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLAL 172
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKL-SDASKAPSSMLPQAKCGTPCYM 168
++LH GIIY D+K NILLD NG L DFGL+++ +D ++ CGT YM
Sbjct: 173 EHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF-----CGTIEYM 227
Query: 169 APELFEEGGV-HSYASDLWGLGCVLYECYAGRPPFV--GREFTQ--LVKSILXXXXXXXX 223
AP++ G H A D W LG ++YE G PF G + +Q + + IL
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ 287
Query: 224 XXXXXXFANLINSLLVKDPAQRL-------------------HWSDLCGHAFWRTKLTPM 264
+LI LL+KDP +RL +W DL K P
Sbjct: 288 EMSALA-KDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAA------KKVPA 340
Query: 265 PLPP 268
P P
Sbjct: 341 PFKP 344
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 134/283 (47%), Gaps = 27/283 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHS 52
+ Y E +G G+++ V K R+K T +A K + K + + + +EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ HPNV+ + YE + L+ E GG+L L + L E+ + + ++ + YL
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130
Query: 113 HSKGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
HS I + DLKP NI LLD N R K+ DFGLA K+ ++ + GTP ++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF------GTPEFV 184
Query: 169 APEL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXX 223
APE+ +E G+ +D+W +G + Y +G PF+G +E V ++
Sbjct: 185 APEIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 224 XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
+ I LLVKDP +R+ D H + + K T L
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 116/222 (52%), Gaps = 24/222 (10%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVD-----KSQKSKVLQEVRMLHSLDHPNV 58
Y + IG G Y K R+K + K +D +++K ++ EV +L L HPN+
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 59 LRFYSWY--ETSAHLWLVLEYCVGGDLMSLL----RQDNQLPEDSIRDLAQDLVRALQYL 112
+R+Y T+ L++V+EYC GGDL S++ ++ L E+ + + L AL+
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 113 HSKG-----IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY 167
H + +++ DLKP+N+ LD KL DFGLAR L+ + + + GTP Y
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-----GTPYY 182
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQ 209
M+PE ++ SD+W LGC+LYE A PPF F+Q
Sbjct: 183 MSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTA--FSQ 221
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 128/257 (49%), Gaps = 16/257 (6%)
Query: 7 YEAIGRGKYSTVYKGRKKKTIEYFAIKSVD--KSQKSKVL-QEVRMLHSLDHPNVLRFYS 63
Y IG G V R+K + A+K +D K Q+ ++L EV ++ H NV+ Y
Sbjct: 50 YVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
Y LW+++E+ GG L ++ Q +L E+ I + + +++AL YLH++G+I+ D+K
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIK 168
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAK--CGTPCYMAPELFEEGGVHSY 181
+ILL +GR KL DFG ++S +P+ K GTP +MAPE+ +++
Sbjct: 169 SDSILLTLDGRVKLSDFGFCAQISKD-------VPKRKXLVGTPYWMAPEVISR-SLYAT 220
Query: 182 ASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXX--XXXXXXXXXXXXFANLINSLLV 239
D+W LG ++ E G PP+ Q +K + + + +LV
Sbjct: 221 EVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLV 280
Query: 240 KDPAQRLHWSDLCGHAF 256
+DP +R +L H F
Sbjct: 281 RDPQERATAQELLDHPF 297
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 135/279 (48%), Gaps = 31/279 (11%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHSLD 54
Y I E +G G+++ V K R+K T +A K + K Q + ++ +EV +L +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HPN++ + YE + L+LE GG+L L Q L E+ + ++ + YLH+
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 115 KGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAP 170
K I + DLKP NI LLD+N KL DFGLA ++ D + + GTP ++AP
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF------GTPEFVAP 187
Query: 171 EL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXXXX 225
E+ +E G+ +D+W +G + Y +G PF+G +E + ++
Sbjct: 188 EIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQ 244
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPM 264
+ I LLVK+ +RL + H W +TP+
Sbjct: 245 TSELAKDFIRKLLVKETRKRLTIQEALRHP-W---ITPV 279
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 149/317 (47%), Gaps = 20/317 (6%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYS 63
Y + E IG G YS + K T FA+K +DKS++ + +L HPN++
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKD 83
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
Y+ ++++V E GG+L+ + + E + + + ++YLH++G+++ DLK
Sbjct: 84 VYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLK 143
Query: 124 PSNIL-LDENGR---TKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
PSNIL +DE+G ++CDFG A++L +A + +L C T ++APE+ E G +
Sbjct: 144 PSNILYVDESGNPESIRICDFGFAKQL----RAENGLL-MTPCYTANFVAPEVLERQG-Y 197
Query: 180 SYASDLWGLGCVLYECYAGRPPFVG------REFTQLVKSILXXXXXXXXXXXXXXFANL 233
A D+W LG +LY G PF E + S +L
Sbjct: 198 DAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDL 257
Query: 234 INSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP---LPPQPAFDSLKGAVRQDENSMLGST 290
++ +L DP QRL + + H W +P L Q A +KGA+ +++ +
Sbjct: 258 VSKMLHVDPHQRLTAALVLRHP-WIVHWDQLPQYQLNRQDAPHLVKGAMAATYSALNRNQ 316
Query: 291 PVRVTPSGRKTQTKTSG 307
+ P GR T + G
Sbjct: 317 SPVLEPVGRSTLAQRRG 333
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 128/272 (47%), Gaps = 23/272 (8%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS---QKSKV---LQEVRMLHSLD 54
+ ++ +G+G + V +K T E +A+K + K Q V + E R+L
Sbjct: 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 55 HPNVL-RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLH 113
P L + +S ++T L+ V+EY GGDLM ++Q + E A ++ L +L
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 138
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
SKGIIY DLK N++LD G K+ DFG+ ++ + + CGTP Y+APE+
Sbjct: 139 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-----NIWDGVTTKXFCGTPDYIAPEII 193
Query: 174 EEGGVHSYAS--DLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFA 231
Y D W G +LYE AG+ PF G + +L +SI+ A
Sbjct: 194 ---AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVA 250
Query: 232 NLINSLLVKDPAQRLHWS-----DLCGHAFWR 258
+ L+ K P +RL D+ HAF+R
Sbjct: 251 -ICKGLMTKHPGKRLGCGPEGERDIKEHAFFR 281
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 137/291 (47%), Gaps = 20/291 (6%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS-----QKSKVLQEVRMLHSLDHPN 57
+Y+I +G+G + V K + + T + +A+K ++K+ S +L+EV +L LDHPN
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
+++ + E S+ ++V E GG+L + + + E + + + + Y+H I
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 118 IYCDLKPSNILLDENGR---TKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
++ DLKP NILL+ + K+ DFGL+ +K + + GT Y+APE+
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM------KDRIGTAYYIAPEVLR 196
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX---XXXXXXFA 231
G + D+W G +LY +G PPF G+ ++K +
Sbjct: 197 --GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 232 NLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP-LPPQPAFDSLKGAVRQ 281
+LI +L P+ R+ + H + + + P + P+ +S +RQ
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQ 305
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 13/280 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ------KSKVLQEVRMLHSLD 54
+ Y + + +G G + V G+ + T A+K +++ + K+ +E++ L
Sbjct: 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP++++ Y T + +++V+EY GG+L + ++ +L E R L Q ++ + Y H
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHR 134
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+++ DLKP N+LLD + K+ DFGL+ +SD + CG+P Y APE+
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE------FLRXSCGSPNYAAPEVIS 188
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
D+W G +LY G PF L K I + L+
Sbjct: 189 GRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVIS-LL 247
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDS 274
+L DP +R D+ H +++ L P P++ S
Sbjct: 248 KHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSS 287
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 132/278 (47%), Gaps = 21/278 (7%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKS--KVLQEVRMLHSLDHPN 57
+ Y + E IG G + V E AIK + +K Q S ++L+E++ + HPN
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLR--------QDNQLPEDSIRDLAQDLVRAL 109
++ +Y+ + LWLV++ GG ++ +++ + L E +I + ++++ L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
+YLH G I+ D+K NILL E+G ++ DFG++ L+ + + + GTPC+MA
Sbjct: 135 EYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 194
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILX---------XXXX 220
PE+ E+ + + +D+W G E G P+ +++ L
Sbjct: 195 PEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDK 254
Query: 221 XXXXXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWR 258
F +I+ L KDP +R ++L H F++
Sbjct: 255 EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 114/222 (51%), Gaps = 24/222 (10%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVD-----KSQKSKVLQEVRMLHSLDHPNV 58
Y + IG G Y K R+K + K +D +++K ++ EV +L L HPN+
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 59 LRFYSWY--ETSAHLWLVLEYCVGGDLMSLL----RQDNQLPEDSIRDLAQDLVRALQYL 112
+R+Y T+ L++V+EYC GGDL S++ ++ L E+ + + L AL+
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 113 HSKG-----IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY 167
H + +++ DLKP+N+ LD KL DFGLAR L+ + GTP Y
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-----GTPYY 182
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQ 209
M+PE ++ SD+W LGC+LYE A PPF F+Q
Sbjct: 183 MSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTA--FSQ 221
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 129/277 (46%), Gaps = 22/277 (7%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK--SKVLQEVRMLHSLDHPNVL 59
++Y + + IG G + R K++ E A+K +++ +K V +E+ SL HPN++
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIV 78
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
RF T HL +V+EY GG+L + + ED R Q L+ + Y H+ + +
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 120 CDLKPSNILLDEN--GRTKLCDFGLARKLSDASKAPSSML---PQAKCGTPCYMAPELFE 174
DLK N LLD + R K+C FG ++ SS+L P++ GTP Y+APE+
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSK---------SSVLHSQPKSTVGTPAYIAPEVLL 189
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGRE----FTQLVKSILXXXXXX-XXXXXXXX 229
+ +D+W G LY G PF E F + + IL
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 230 FANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
+LI+ + V DPA+R+ ++ H W K P L
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHE-WFLKNLPADL 285
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 131/272 (48%), Gaps = 17/272 (6%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYS 63
Y + E IG G YS + K T +A+K +DKS++ + +L HPN++
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
Y+ H++LV E GG+L+ + + E + + + ++YLHS+G+++ DLK
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLK 148
Query: 124 PSNIL-LDENGRT---KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
PSNIL +DE+G ++CDFG A++L +A + +L C T ++APE+ + G +
Sbjct: 149 PSNILYVDESGNPECLRICDFGFAKQL----RAENGLL-MTPCYTANFVAPEVLKRQG-Y 202
Query: 180 SYASDLWGLGCVLYECYAGRPPFVG------REFTQLVKSILXXXXXXXXXXXXXXFANL 233
D+W LG +LY AG PF E + S +L
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDL 262
Query: 234 INSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
++ +L DP QRL + H W T+ +P
Sbjct: 263 VSKMLHVDPHQRLTAKQVLQHP-WVTQKDKLP 293
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 128/272 (47%), Gaps = 23/272 (8%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS---QKSKV---LQEVRMLHSLD 54
+ ++ +G+G + V +K T E +A+K + K Q V + E R+L
Sbjct: 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 399
Query: 55 HPNVL-RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLH 113
P L + +S ++T L+ V+EY GGDLM ++Q + E A ++ L +L
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 459
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
SKGIIY DLK N++LD G K+ DFG+ ++ + + CGTP Y+APE+
Sbjct: 460 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-----NIWDGVTTKXFCGTPDYIAPEII 514
Query: 174 EEGGVHSYAS--DLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFA 231
Y D W G +LYE AG+ PF G + +L +SI+ A
Sbjct: 515 ---AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVA 571
Query: 232 NLINSLLVKDPAQRLHWS-----DLCGHAFWR 258
+ L+ K P +RL D+ HAF+R
Sbjct: 572 -ICKGLMTKHPGKRLGCGPEGERDIKEHAFFR 602
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 132/278 (47%), Gaps = 21/278 (7%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKS--KVLQEVRMLHSLDHPN 57
+ Y + E IG G + V E AIK + +K Q S ++L+E++ + HPN
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLR--------QDNQLPEDSIRDLAQDLVRAL 109
++ +Y+ + LWLV++ GG ++ +++ + L E +I + ++++ L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
+YLH G I+ D+K NILL E+G ++ DFG++ L+ + + + GTPC+MA
Sbjct: 130 EYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 189
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILX---------XXXX 220
PE+ E+ + + +D+W G E G P+ +++ L
Sbjct: 190 PEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDK 249
Query: 221 XXXXXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWR 258
F +I+ L KDP +R ++L H F++
Sbjct: 250 EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 287
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 127/277 (45%), Gaps = 22/277 (7%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ--KSKVLQEVRMLHSLDHPNVL 59
++Y + IG G + R K T E A+K +++ V +E+ SL HPN++
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIV 79
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
RF T HL +++EY GG+L + + ED R Q L+ + Y HS I +
Sbjct: 80 RFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICH 139
Query: 120 CDLKPSNILLDEN--GRTKLCDFGLARKLSDASKAPSSML---PQAKCGTPCYMAPELFE 174
DLK N LLD + R K+CDFG ++ SS+L P++ GTP Y+APE+
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYSK---------SSVLHSQPKSTVGTPAYIAPEVLL 190
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVG----REFTQLVKSILXXXXXX-XXXXXXXX 229
+D+W G LY G PF R++ + ++ IL
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPE 250
Query: 230 FANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
+LI+ + V DPA R+ ++ H+ W K P L
Sbjct: 251 CCHLISRIFVADPATRISIPEIKTHS-WFLKNLPADL 286
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 116 bits (291), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 134/279 (48%), Gaps = 31/279 (11%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHSLD 54
Y I E +G G+++ V K R+K T +A K + K Q + ++ +EV +L +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
H NV+ + YE + L+LE GG+L L Q L E+ + ++ + YLH+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 115 KGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAP 170
K I + DLKP NI LLD+N KL DFGLA ++ D + + GTP ++AP
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF------GTPEFVAP 187
Query: 171 EL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXXXX 225
E+ +E G+ +D+W +G + Y +G PF+G +E + S+
Sbjct: 188 EIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSH 244
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPM 264
+ I LLVK+ +RL + H W +TP+
Sbjct: 245 TSELAKDFIRKLLVKETRKRLTIQEALRHP-W---ITPV 279
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 116 bits (291), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 131/272 (48%), Gaps = 17/272 (6%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYS 63
Y + E IG G YS + K T +A+K +DKS++ + +L HPN++
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
Y+ H++LV E GG+L+ + + E + + + ++YLHS+G+++ DLK
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLK 148
Query: 124 PSNIL-LDENGRT---KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
PSNIL +DE+G ++CDFG A++L +A + +L C T ++APE+ + G +
Sbjct: 149 PSNILYVDESGNPECLRICDFGFAKQL----RAENGLL-MTPCYTANFVAPEVLKRQG-Y 202
Query: 180 SYASDLWGLGCVLYECYAGRPPFVG------REFTQLVKSILXXXXXXXXXXXXXXFANL 233
D+W LG +LY AG PF E + S +L
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDL 262
Query: 234 INSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP 265
++ +L DP QRL + H W T+ +P
Sbjct: 263 VSKMLHVDPHQRLTAKQVLQHP-WVTQKDKLP 293
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 127/276 (46%), Gaps = 26/276 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---KVLQEVR---------M 49
+Y + IGRG S V + + T FA+K ++ + + + L+EVR +
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 50 LHSLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
HP+++ YE+S+ ++LV + G+L L + L E R + + L+ A+
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAV 213
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
+LH+ I++ DLKP NILLD+N + +L DFG + L K + CGTP Y+A
Sbjct: 214 SFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL------RELCGTPGYLA 267
Query: 170 PELF-----EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX- 223
PE+ E + DLW G +L+ AG PPF R +++ I+
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSP 327
Query: 224 --XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFW 257
+LI+ LL DP RL H F+
Sbjct: 328 EWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 28/274 (10%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHSLD 54
Y I E +G G+++ V K R+K T +A K + K Q + ++ +EV +L +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
H NV+ + YE + L+LE GG+L L Q L E+ + ++ + YLH+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 115 KGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAP 170
K I + DLKP NI LLD+N KL DFGLA ++ D + + GTP ++AP
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF------GTPEFVAP 187
Query: 171 EL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXXXX 225
E+ +E G+ +D+W +G + Y +G PF+G +E + S+
Sbjct: 188 EIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSH 244
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRT 259
+ I LLVK+ +RL + H W T
Sbjct: 245 TSELAKDFIRKLLVKETRKRLTIQEALRHP-WIT 277
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 133/276 (48%), Gaps = 14/276 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS-----QKSKVLQEVRMLHSLDH 55
M +Y + IG G + + + + IK ++ S ++ + +EV +L ++ H
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH 82
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQ--LPEDSIRDLAQDLVRALQYLH 113
PN++++ +E + L++V++YC GGDL + ED I D + AL+++H
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
+ I++ D+K NI L ++G +L DFG+AR L+ + L +A GTP Y++PE+
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE-----LARACIGTPYYLSPEIC 197
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
E ++ SD+W LGCVLYE + F LV I+ +L
Sbjct: 198 ENKPYNN-KSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSL 256
Query: 234 INSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPPQ 269
++ L ++P R + + F ++ L PQ
Sbjct: 257 VSQLFKRNPRDRPSVNSILEKGFIAKRIEKF-LSPQ 291
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 126/274 (45%), Gaps = 16/274 (5%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK--SKVLQEVRMLHSLDHPNVL 59
++Y + + IG G + R K+ E A+K +++ +K V +E+ SL HPN++
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIV 78
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
RF T HL +V+EY GG+L + + ED R Q L+ + Y H+ + +
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAH 138
Query: 120 CDLKPSNILLDEN--GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
DLK N LLD + R K+ DFG ++ S+ P++ GTP Y+APE+ +
Sbjct: 139 RDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQ------PKSAVGTPAYIAPEVLLKKE 192
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFVGRE----FTQLVKSILXXXXXX-XXXXXXXXFAN 232
+D+W G LY G PF E F + + IL +
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 233 LINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
LI+ + V DPA+R+ ++ H W K P L
Sbjct: 253 LISRIFVADPAKRISIPEIRNHE-WFLKNLPADL 285
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 147/317 (46%), Gaps = 20/317 (6%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYS 63
Y + E IG G YS + K T FA+K +DKS++ + +L HPN++
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKD 83
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
Y+ ++++V E GG+L+ + + E + + + ++YLH++G+++ DLK
Sbjct: 84 VYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLK 143
Query: 124 PSNIL-LDENGR---TKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
PSNIL +DE+G ++CDFG A++L +A + +L C T ++APE+ E G +
Sbjct: 144 PSNILYVDESGNPESIRICDFGFAKQL----RAENGLL-XTPCYTANFVAPEVLERQG-Y 197
Query: 180 SYASDLWGLGCVLYECYAGRPPFVG------REFTQLVKSILXXXXXXXXXXXXXXFANL 233
A D+W LG +LY G PF E + S +L
Sbjct: 198 DAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDL 257
Query: 234 INSLLVKDPAQRLHWSDLCGHAFWRTKLTPMP---LPPQPAFDSLKGAVRQDENSMLGST 290
++ L DP QRL + + H W +P L Q A +KGA +++ +
Sbjct: 258 VSKXLHVDPHQRLTAALVLRHP-WIVHWDQLPQYQLNRQDAPHLVKGAXAATYSALNRNQ 316
Query: 291 PVRVTPSGRKTQTKTSG 307
+ P GR T + G
Sbjct: 317 SPVLEPVGRSTLAQRRG 333
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 128/277 (46%), Gaps = 22/277 (7%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK--SKVLQEVRMLHSLDHPNVL 59
++Y + + IG G + R K++ E A+K +++ +K V +E+ SL HPN++
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIV 78
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
RF T HL +V+EY GG+L + + ED R Q L+ + Y H+ + +
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 120 CDLKPSNILLDEN--GRTKLCDFGLARKLSDASKAPSSML---PQAKCGTPCYMAPELFE 174
DLK N LLD + R K+C FG ++ SS+L P+ GTP Y+APE+
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSK---------SSVLHSQPKDTVGTPAYIAPEVLL 189
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGRE----FTQLVKSILXXXXXX-XXXXXXXX 229
+ +D+W G LY G PF E F + + IL
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 230 FANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPL 266
+LI+ + V DPA+R+ ++ H W K P L
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHE-WFLKNLPADL 285
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 31/279 (11%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHSLD 54
Y I E +G G+++ V K R+K T +A K + K Q + ++ +EV +L +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
H NV+ + YE + L+LE GG+L L Q L E+ + ++ + YLH+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 115 KGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAP 170
K I + DLKP NI LLD+N KL DFGLA ++ D + + GTP ++AP
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF------GTPEFVAP 187
Query: 171 EL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXXXX 225
E+ +E G+ +D+W +G + Y +G PF+G +E + ++
Sbjct: 188 EIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQ 244
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPM 264
+ I LLVK+ +RL + H W +TP+
Sbjct: 245 TSELAKDFIRKLLVKETRKRLTIQEALRHP-W---ITPV 279
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 31/279 (11%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHSLD 54
Y I E +G G+++ V K R+K T +A K + K Q + ++ +EV +L +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
H NV+ + YE + L+LE GG+L L Q L E+ + ++ + YLH+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 115 KGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAP 170
K I + DLKP NI LLD+N KL DFGLA ++ D + + GTP ++AP
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF------GTPEFVAP 187
Query: 171 EL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXXXX 225
E+ +E G+ +D+W +G + Y +G PF+G +E + S+
Sbjct: 188 EIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSH 244
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPM 264
+ I LLVK+ +RL + H + +TP+
Sbjct: 245 TSELAKDFIRKLLVKETRKRLTIQEALRHPW----ITPV 279
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 132/292 (45%), Gaps = 20/292 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ------KSKVLQEVRMLHSLDH 55
++Y +G+G + V + K T + A+K + K Q K +L+EV++L LDH
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
PN+++ Y ++E + +LV E GG+L + + E + + ++ + Y+H
Sbjct: 86 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 145
Query: 116 GIIYCDLKPSNILLD---ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL 172
I++ DLKP N+LL+ ++ ++ DFGL+ + K K GT Y+APE+
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD------KIGTAYYIAPEV 199
Query: 173 FEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX---XXXXXX 229
G + D+W G +LY +G PPF G ++K +
Sbjct: 200 LH--GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 257
Query: 230 FANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSLKGAVRQ 281
+LI +L P+ R+ D H + +T P+ D+ +RQ
Sbjct: 258 AKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQ 309
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 14/274 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDK------SQKSKVLQEVRMLHSLD 54
+ Y I + +G G + V T + A+K ++K + ++ +E+ L L
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 62
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP++++ Y ++ + +V+EY G +L + Q +++ E R Q ++ A++Y H
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 121
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
I++ DLKP N+LLDE+ K+ DFGL+ ++D + +S CG+P Y APE+
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS------CGSPNYAAPEVIS 175
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
D+W G +LY R PF L K+I A LI
Sbjct: 176 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI-SNGVYTLPKFLSPGAAGLI 234
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
+L+ +P R+ ++ +++ L LPP
Sbjct: 235 KRMLIVNPLNRISIHEIMQDDWFKVDLPEYLLPP 268
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 14/274 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDK------SQKSKVLQEVRMLHSLD 54
+ Y I + +G G + V T + A+K ++K + ++ +E+ L L
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 66
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP++++ Y ++ + +V+EY G +L + Q +++ E R Q ++ A++Y H
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 125
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
I++ DLKP N+LLDE+ K+ DFGL+ ++D + +S CG+P Y APE+
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS------CGSPNYAAPEVIS 179
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
D+W G +LY R PF L K+I A LI
Sbjct: 180 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI-SNGVYTLPKFLSPGAAGLI 238
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
+L+ +P R+ ++ +++ L LPP
Sbjct: 239 KRMLIVNPLNRISIHEIMQDDWFKVDLPEYLLPP 272
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 132/292 (45%), Gaps = 20/292 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ------KSKVLQEVRMLHSLDH 55
++Y +G+G + V + K T + A+K + K Q K +L+EV++L LDH
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 109
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
PN+++ Y ++E + +LV E GG+L + + E + + ++ + Y+H
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 169
Query: 116 GIIYCDLKPSNILLD---ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL 172
I++ DLKP N+LL+ ++ ++ DFGL+ + K K GT Y+APE+
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD------KIGTAYYIAPEV 223
Query: 173 FEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX---XXXXXX 229
G + D+W G +LY +G PPF G ++K +
Sbjct: 224 LH--GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 281
Query: 230 FANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSLKGAVRQ 281
+LI +L P+ R+ D H + +T P+ D+ +RQ
Sbjct: 282 AKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQ 333
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 132/292 (45%), Gaps = 20/292 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ------KSKVLQEVRMLHSLDH 55
++Y +G+G + V + K T + A+K + K Q K +L+EV++L LDH
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 108
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
PN+++ Y ++E + +LV E GG+L + + E + + ++ + Y+H
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 168
Query: 116 GIIYCDLKPSNILLD---ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL 172
I++ DLKP N+LL+ ++ ++ DFGL+ + K K GT Y+APE+
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD------KIGTAYYIAPEV 222
Query: 173 FEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX---XXXXXX 229
G + D+W G +LY +G PPF G ++K +
Sbjct: 223 LH--GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 280
Query: 230 FANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSLKGAVRQ 281
+LI +L P+ R+ D H + +T P+ D+ +RQ
Sbjct: 281 AKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQ 332
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 15/223 (6%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPN 57
+ I + IGRG + V + K T +A+K ++K + K +E +L + D
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 135
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKG 116
+ + ++ HL+LV++Y VGGDL++LL + +++LPED R ++V A+ +H
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 195
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE-- 174
++ D+KP N+LLD NG +L DFG K++D SS+ GTP Y++PE+ +
Sbjct: 196 YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV----AVGTPDYISPEILQAM 251
Query: 175 EGGVHSYA--SDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
E G+ Y D W LG +YE G PF + I+
Sbjct: 252 EDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 134/279 (48%), Gaps = 31/279 (11%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---------KSKVLQEVRMLHSLD 54
Y I E +G G+++ V K R+K T +A K + K Q + ++ +EV +L +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
H NV+ + YE + L+LE GG+L L Q L E+ + ++ + YLH+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 115 KGIIYCDLKPSNI-LLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAP 170
K I + DLKP NI LLD+N KL DFGLA ++ D + + GTP ++AP
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF------GTPEFVAP 187
Query: 171 EL--FEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXXXX 225
E+ +E G+ +D+W +G + Y +G PF+G +E + ++
Sbjct: 188 EIVNYEPLGLE---ADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQ 244
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPM 264
+ I LLVK+ +RL + H + +TP+
Sbjct: 245 TSELAKDFIRKLLVKETRKRLTIQEALRHPW----ITPV 279
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 15/223 (6%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPN 57
+ I + IGRG + V + K T +A+K ++K + K +E +L + D
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 151
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKG 116
+ + ++ HL+LV++Y VGGDL++LL + +++LPED R ++V A+ +H
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE-- 174
++ D+KP N+LLD NG +L DFG K++D SS+ GTP Y++PE+ +
Sbjct: 212 YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV----AVGTPDYISPEILQAM 267
Query: 175 EGGVHSYA--SDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
E G+ Y D W LG +YE G PF + I+
Sbjct: 268 EDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 310
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 17/252 (6%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDK----SQKSKVLQEVRMLHSLDHPNVL 59
+ E +G G +S V +K T + FA+K + K ++S + E+ +L + H N++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
YE+ HL+LV++ GG+L + + E L + ++ A+ YLH GI++
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVH 143
Query: 120 CDLKPSNILL---DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
DLKP N+L DE + + DFGL++ + ++ A CGTP Y+APE+ +
Sbjct: 144 RDLKPENLLYYSQDEESKIMISDFGLSK-----MEGKGDVMSTA-CGTPGYVAPEVLAQK 197
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX---XXXXXXFANL 233
+S A D W +G + Y G PPF ++L + IL +
Sbjct: 198 P-YSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDF 256
Query: 234 INSLLVKDPAQR 245
I +L+ KDP +R
Sbjct: 257 IRNLMEKDPNKR 268
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 121/247 (48%), Gaps = 17/247 (6%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS---QKSKVLQEVRMLHSLDHPNVLRFYSW 64
E +G G +S V+ +++ T + FA+K + KS + S + E+ +L + H N++
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 65 YETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKP 124
YE++ H +LV++ GG+L + + E + Q ++ A++YLH GI++ DLKP
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKP 134
Query: 125 SNILL---DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSY 181
N+L +EN + + DFGL SK + + CGTP Y+APE+ + +S
Sbjct: 135 ENLLYLTPEENSKIMITDFGL-------SKMEQNGIMSTACGTPGYVAPEVLAQKP-YSK 186
Query: 182 ASDLWGLGCVLYECYAGRPPFVGREFTQLVKSI---LXXXXXXXXXXXXXXFANLINSLL 238
A D W +G + Y G PPF ++L + I + I LL
Sbjct: 187 AVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLL 246
Query: 239 VKDPAQR 245
KDP +R
Sbjct: 247 EKDPNER 253
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 10/204 (4%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK---VLQEVRMLHSLDHPNVL 59
+Y +E IG+G TVY T + AI+ ++ Q+ K ++ E+ ++ +PN++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
+ Y LW+V+EY GG L ++ + + E I + ++ ++AL++LHS +I+
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIH 139
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
D+K NILL +G KL DFG +++ S+M+ GTP +MAPE+ +
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-----GTPYWMAPEVVTRKA-Y 193
Query: 180 SYASDLWGLGCVLYECYAGRPPFV 203
D+W LG + E G PP++
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYL 217
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 114/220 (51%), Gaps = 16/220 (7%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS-----QKSKVLQEVRMLHSLDHPN 57
+Y+I +G+G + V K + + T + +A+K ++K+ S +L+EV +L LDHPN
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
+++ + E S+ ++V E GG+L + + + E + + + + Y+H I
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 118 IYCDLKPSNILLDENGR---TKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
++ DLKP NILL+ + K+ DFGL+ +K + + GT Y+APE+
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM------KDRIGTAYYIAPEVLR 196
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSI 214
G + D+W G +LY +G PPF G+ ++K +
Sbjct: 197 --GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVD------------KSQKSKVLQEVRMLH 51
Y E +GRG S V + K T + +A+K +D + + L+EV +L
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 52 SLD-HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQ 110
+ HPN+++ YET+ +LV + G+L L + L E R + + L+ +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAP 170
LH I++ DLKP NILLD++ KL DFG + +L K S CGTP Y+AP
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSV------CGTPSYLAP 192
Query: 171 ELFEEGGVHSYAS-----DLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX-- 223
E+ E ++ D+W G ++Y AG PPF R+ +++ I+
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 252
Query: 224 -XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWR 258
+L++ LV P +R + H F++
Sbjct: 253 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 113 bits (283), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 114/220 (51%), Gaps = 16/220 (7%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS-----QKSKVLQEVRMLHSLDHPN 57
+Y+I +G+G + V K + + T + +A+K ++K+ S +L+EV +L LDHPN
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
+++ + E S+ ++V E GG+L + + + E + + + + Y+H I
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 118 IYCDLKPSNILLDENGR---TKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
++ DLKP NILL+ + K+ DFGL+ +K + + GT Y+APE+
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM------KDRIGTAYYIAPEVLR 196
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSI 214
G + D+W G +LY +G PPF G+ ++K +
Sbjct: 197 --GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 113 bits (283), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 17/272 (6%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK---VLQEVRMLHSLDHPNVL 59
+Y +E IG+G TVY T + AI+ ++ Q+ K ++ E+ ++ +PN++
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
+ Y LW+V+EY GG L ++ + + E I + ++ ++AL++LHS +I+
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIH 140
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
D+K NILL +G KL DFG +++ S M+ GTP +MAPE+ +
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-----GTPYWMAPEVVTRKA-Y 194
Query: 180 SYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX--XXXXXXFANLINSL 237
D+W LG + E G PP++ + + I F + +N
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 254
Query: 238 LVKDPAQRLHWSDLCGHAFWR-----TKLTPM 264
L D +R +L H F + + LTP+
Sbjct: 255 LEMDVEKRGSAKELIQHQFLKIAKPLSSLTPL 286
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 113 bits (283), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 10/210 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV-----LQEVRMLHSLDH 55
M +Y IG G Y V+K R + T + AIK +S+ V L+E+RML L H
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
PN++ + L LV EYC L L R +PE ++ + ++A+ + H
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH 121
Query: 116 GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
I+ D+KP NIL+ ++ KLCDFG AR L+ PS + T Y +PEL
Sbjct: 122 NCIHRDVKPENILITKHSVIKLCDFGFARLLT----GPSDYY-DDEVATRWYRSPELLVG 176
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVGR 205
+ D+W +GCV E +G P + G+
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSGVPLWPGK 206
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 113 bits (283), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 13/222 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M +Y E IG G Y TV+K + ++T E A+K V D+ S L+E+ +L L H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDN-QLPEDSIRDLAQDLVRALQYLHS 114
N++R + + L LV E+C DL N L + ++ L++ L + HS
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+ +++ DLKP N+L++ NG KL +FGLAR + S A+ T Y P++
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS-----AEVVTLWYRPPDVLF 174
Query: 175 EGGVHSYASDLWGLGCVLYE-CYAGRPPFVGREFTQLVKSIL 215
++S + D+W GC+ E AGRP F G + +K I
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF 216
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 113 bits (282), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 124/254 (48%), Gaps = 16/254 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD--KSQKSKVL-QEVRMLHSLDHPNVLRFYSWYE 66
IG G V + + + A+K +D K Q+ ++L EV ++ H NV+ Y+ Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 67 TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSN 126
LW+V+E+ GG L ++ ++ E+ I + +++AL LH++G+I+ D+K +
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 277
Query: 127 ILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAK--CGTPCYMAPELFEEGGVHSYASD 184
ILL +GR KL DFG ++S +P+ K GTP +MAPEL + D
Sbjct: 278 ILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPELISRLP-YGPEVD 329
Query: 185 LWGLGCVLYECYAGRPPFVGREFTQLVKSILXX--XXXXXXXXXXXXFANLINSLLVKDP 242
+W LG ++ E G PP+ + +K I ++ LLV+DP
Sbjct: 330 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 389
Query: 243 AQRLHWSDLCGHAF 256
AQR ++L H F
Sbjct: 390 AQRATAAELLKHPF 403
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 113 bits (282), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 17/272 (6%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK---VLQEVRMLHSLDHPNVL 59
+Y +E IG+G TVY T + AI+ ++ Q+ K ++ E+ ++ +PN++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
+ Y LW+V+EY GG L ++ + + E I + ++ ++AL++LHS +I+
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIH 139
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
D+K NILL +G KL DFG +++ S M+ GTP +MAPE+ +
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-----GTPYWMAPEVVTRKA-Y 193
Query: 180 SYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX--XXXXXXFANLINSL 237
D+W LG + E G PP++ + + I F + +N
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 238 LVKDPAQRLHWSDLCGHAFWR-----TKLTPM 264
L D +R +L H F + + LTP+
Sbjct: 254 LDMDVEKRGSAKELLQHQFLKIAKPLSSLTPL 285
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 113 bits (282), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 17/272 (6%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK---VLQEVRMLHSLDHPNVL 59
+Y +E IG+G TVY T + AI+ ++ Q+ K ++ E+ ++ +PN++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
+ Y LW+V+EY GG L ++ + + E I + ++ ++AL++LHS +I+
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIH 139
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
D+K NILL +G KL DFG +++ S M+ GTP +MAPE+ +
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-----GTPYWMAPEVVTRKA-Y 193
Query: 180 SYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX--XXXXXXFANLINSL 237
D+W LG + E G PP++ + + I F + +N
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 238 LVKDPAQRLHWSDLCGHAFWR-----TKLTPM 264
L D +R +L H F + + LTP+
Sbjct: 254 LEMDVEKRGSAKELLQHQFLKIAKPLSSLTPL 285
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 113 bits (282), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 122/251 (48%), Gaps = 15/251 (5%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQ-EVRMLHSLDHPNVLRFY 62
+ + +GRG S VY+ ++K T + +A+K + K+ K+++ E+ +L L HPN+++
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLK 114
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDL 122
+ET + LVLE GG+L + + E D + ++ A+ YLH GI++ DL
Sbjct: 115 EIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDL 174
Query: 123 KPSNILLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
KP N+L + K+ DFGL++ + +L + CGTP Y APE+ G +
Sbjct: 175 KPENLLYATPAPDAPLKIADFGLSKIVE------HQVLMKTVCGTPGYCAPEIL-RGCAY 227
Query: 180 SYASDLWGLGCVLYECYAGRPPFVGREFTQ-LVKSILXXXXXXXXXXXXXXFAN---LIN 235
D+W +G + Y G PF Q + + IL N L+
Sbjct: 228 GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVR 287
Query: 236 SLLVKDPAQRL 246
L+V DP +RL
Sbjct: 288 KLIVLDPKKRL 298
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 113 bits (282), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 110/222 (49%), Gaps = 13/222 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M +Y E IG G Y TV+K + ++T E A+K V D+ S L+E+ +L L H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDN-QLPEDSIRDLAQDLVRALQYLHS 114
N++R + + L LV E+C DL N L + ++ L++ L + HS
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+ +++ DLKP N+L++ NG KL DFGLAR + S A+ T Y P++
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS-----AEVVTLWYRPPDVLF 174
Query: 175 EGGVHSYASDLWGLGCVLYE-CYAGRPPFVGREFTQLVKSIL 215
++S + D+W GC+ E A RP F G + +K I
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIF 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 113 bits (282), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVD------------KSQKSKVLQEVRMLH 51
Y E +GRG S V + K T + +A+K +D + + L+EV +L
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 52 SLD-HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQ 110
+ HPN+++ YET+ +LV + G+L L + L E R + + L+ +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAP 170
LH I++ DLKP NILLD++ KL DFG + +L K + CGTP Y+AP
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL------REVCGTPSYLAP 192
Query: 171 ELFEEGGVHSYAS-----DLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX-- 223
E+ E ++ D+W G ++Y AG PPF R+ +++ I+
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 252
Query: 224 -XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWR 258
+L++ LV P +R + H F++
Sbjct: 253 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 113 bits (282), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 124/254 (48%), Gaps = 16/254 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD--KSQKSKVL-QEVRMLHSLDHPNVLRFYSWYE 66
IG G V + + + A+K +D K Q+ ++L EV ++ H NV+ Y+ Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 67 TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSN 126
LW+V+E+ GG L ++ ++ E+ I + +++AL LH++G+I+ D+K +
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 157
Query: 127 ILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAK--CGTPCYMAPELFEEGGVHSYASD 184
ILL +GR KL DFG ++S +P+ K GTP +MAPEL + D
Sbjct: 158 ILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPELISRLP-YGPEVD 209
Query: 185 LWGLGCVLYECYAGRPPFVGREFTQLVKSILXXX--XXXXXXXXXXXFANLINSLLVKDP 242
+W LG ++ E G PP+ + +K I ++ LLV+DP
Sbjct: 210 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 269
Query: 243 AQRLHWSDLCGHAF 256
AQR ++L H F
Sbjct: 270 AQRATAAELLKHPF 283
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 17/272 (6%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK---VLQEVRMLHSLDHPNVL 59
+Y +E IG+G TVY T + AI+ ++ Q+ K ++ E+ ++ +PN++
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
+ Y LW+V+EY GG L ++ + + E I + ++ ++AL++LHS +I+
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIH 140
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
++K NILL +G KL DFG +++ S+M+ GTP +MAPE+ +
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-----GTPYWMAPEVVTRKA-Y 194
Query: 180 SYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX--XXXXXXFANLINSL 237
D+W LG + E G PP++ + + I F + +N
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 254
Query: 238 LVKDPAQRLHWSDLCGHAFWR-----TKLTPM 264
L D +R +L H F + + LTP+
Sbjct: 255 LEMDVEKRGSAKELIQHQFLKIAKPLSSLTPL 286
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 124/254 (48%), Gaps = 16/254 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD--KSQKSKVL-QEVRMLHSLDHPNVLRFYSWYE 66
IG G V + + + A+K +D K Q+ ++L EV ++ H NV+ Y+ Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 67 TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSN 126
LW+V+E+ GG L ++ ++ E+ I + +++AL LH++G+I+ D+K +
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 155
Query: 127 ILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAK--CGTPCYMAPELFEEGGVHSYASD 184
ILL +GR KL DFG ++S +P+ K GTP +MAPEL + D
Sbjct: 156 ILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPELISRLP-YGPEVD 207
Query: 185 LWGLGCVLYECYAGRPPFVGREFTQLVKSILXXX--XXXXXXXXXXXFANLINSLLVKDP 242
+W LG ++ E G PP+ + +K I ++ LLV+DP
Sbjct: 208 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 267
Query: 243 AQRLHWSDLCGHAF 256
AQR ++L H F
Sbjct: 268 AQRATAAELLKHPF 281
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVD------------KSQKSKVLQEVRMLH 51
Y E +GRG S V + K T + +A+K +D + + L+EV +L
Sbjct: 6 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 52 SLD-HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQ 110
+ HPN+++ YET+ +LV + G+L L + L E R + + L+ +
Sbjct: 66 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 125
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAP 170
LH I++ DLKP NILLD++ KL DFG + +L K + CGTP Y+AP
Sbjct: 126 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL------REVCGTPSYLAP 179
Query: 171 ELFEEGGVHSYAS-----DLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX-- 223
E+ E ++ D+W G ++Y AG PPF R+ +++ I+
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 239
Query: 224 -XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWR 258
+L++ LV P +R + H F++
Sbjct: 240 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 16/266 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD--KSQKSKVL-QEVRMLHSLDHPNVLRFYSWYE 66
IG G V + + + A+K +D K Q+ ++L EV ++ H NV+ Y+ Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 67 TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSN 126
LW+V+E+ GG L ++ ++ E+ I + +++AL LH++G+I+ D+K +
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 146
Query: 127 ILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAK--CGTPCYMAPELFEEGGVHSYASD 184
ILL +GR KL DFG ++S +P+ K GTP +MAPEL + D
Sbjct: 147 ILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPELISRLP-YGPEVD 198
Query: 185 LWGLGCVLYECYAGRPPFVGREFTQLVKSILXXX--XXXXXXXXXXXFANLINSLLVKDP 242
+W LG ++ E G PP+ + +K I ++ LLV+DP
Sbjct: 199 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 258
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPP 268
AQR ++L H F P + P
Sbjct: 259 AQRATAAELLKHPFLAKAGPPASIVP 284
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 16/266 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD--KSQKSKVL-QEVRMLHSLDHPNVLRFYSWYE 66
IG G V + + + A+K +D K Q+ ++L EV ++ H NV+ Y+ Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 67 TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSN 126
LW+V+E+ GG L ++ ++ E+ I + +++AL LH++G+I+ D+K +
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 150
Query: 127 ILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAK--CGTPCYMAPELFEEGGVHSYASD 184
ILL +GR KL DFG ++S +P+ K GTP +MAPEL + D
Sbjct: 151 ILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPELISRLP-YGPEVD 202
Query: 185 LWGLGCVLYECYAGRPPFVGREFTQLVKSILXXX--XXXXXXXXXXXFANLINSLLVKDP 242
+W LG ++ E G PP+ + +K I ++ LLV+DP
Sbjct: 203 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 262
Query: 243 AQRLHWSDLCGHAFWRTKLTPMPLPP 268
AQR ++L H F P + P
Sbjct: 263 AQRATAAELLKHPFLAKAGPPASIVP 288
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 124/254 (48%), Gaps = 16/254 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD--KSQKSKVL-QEVRMLHSLDHPNVLRFYSWYE 66
IG G V + + + A+K +D K Q+ ++L EV ++ H NV+ Y+ Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 67 TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSN 126
LW+V+E+ GG L ++ ++ E+ I + +++AL LH++G+I+ D+K +
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 200
Query: 127 ILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAK--CGTPCYMAPELFEEGGVHSYASD 184
ILL +GR KL DFG ++S +P+ K GTP +MAPEL + D
Sbjct: 201 ILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLVGTPYWMAPELISRLP-YGPEVD 252
Query: 185 LWGLGCVLYECYAGRPPFVGREFTQLVKSILXX--XXXXXXXXXXXXFANLINSLLVKDP 242
+W LG ++ E G PP+ + +K I ++ LLV+DP
Sbjct: 253 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 312
Query: 243 AQRLHWSDLCGHAF 256
AQR ++L H F
Sbjct: 313 AQRATAAELLKHPF 326
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 130/261 (49%), Gaps = 23/261 (8%)
Query: 1 MNQYHIYEA--IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK-----SKVLQEVRMLH-S 52
N ++I + +GRGK++ V + K T + +A K + K ++ +++L E+ +L +
Sbjct: 26 FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELA 85
Query: 53 LDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQ 110
P V+ + YE ++ + L+LEY GG++ SL + + E+ + L + ++ +
Sbjct: 86 KSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVY 145
Query: 111 YLHSKGIIYCDLKPSNILLDEN---GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY 167
YLH I++ DLKP NILL G K+ DFG++RK+ A + M GTP Y
Sbjct: 146 YLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIM------GTPEY 199
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQL---VKSILXXXXXXXXX 224
+APE+ + + A+D+W +G + Y PFVG + + + +
Sbjct: 200 LAPEILNYDPITT-ATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFS 258
Query: 225 XXXXXFANLINSLLVKDPAQR 245
+ I SLLVK+P +R
Sbjct: 259 SVSQLATDFIQSLLVKNPEKR 279
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 122/273 (44%), Gaps = 13/273 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ------KSKVLQEVRMLHSLD 54
+ Y + + +G G + V G + T A+K +++ + K+ +E++ L
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP++++ Y T ++V+EY GG+L + + ++ E R L Q ++ A+ Y H
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+++ DLKP N+LLD + K+ DFGL+ +SD +S CG+P Y APE+
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS------CGSPNYAAPEVIS 183
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
D+W G +LY G PF L K I A L+
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI-RGGVFYIPEYLNRSVATLL 242
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLP 267
+L DP +R D+ H +++ L P
Sbjct: 243 MHMLQVDPLKRATIKDIREHEWFKQDLPSYLFP 275
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 117/231 (50%), Gaps = 27/231 (11%)
Query: 9 AIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK--SKVLQEVRMLHSLDHPNVLRFYS-WY 65
+G+G + V K R Y+AIK + +++ S +L EV +L SL+H V+R+Y+ W
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 66 E------------TSAHLWLVLEYCVGGDLMSLLRQDN-QLPEDSIRDLAQDLVRALQYL 112
E + L++ +EYC G L L+ +N D L + ++ AL Y+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLS---DASKAPSSMLP------QAKCG 163
HS+GII+ DLKP NI +DE+ K+ DFGLA+ + D K S LP + G
Sbjct: 133 HSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
Query: 164 TPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSI 214
T Y+A E+ + G ++ D++ LG + +E P G E ++K +
Sbjct: 193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNILKKL 241
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----------KVLQEVRML 50
++Y + + +G G V ++KT + AIK + K + + V E+ +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 51 HSLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQ 110
L+HP +++ ++++ + ++VLE GG+L + + +L E + + ++ A+Q
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 111 YLHSKGIIYCDLKPSNILL---DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY 167
YLH GII+ DLKP N+LL +E+ K+ DFG ++ L + S L + CGTP Y
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------LMRTLCGTPTY 182
Query: 168 MAPELFEEGGVHSY--ASDLWGLGCVLYECYAGRPPF 202
+APE+ G Y A D W LG +L+ C +G PPF
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----------KVLQEVRML 50
++Y + + +G G V ++KT + AIK + K + + V E+ +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 51 HSLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQ 110
L+HP +++ ++++ + ++VLE GG+L + + +L E + + ++ A+Q
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 111 YLHSKGIIYCDLKPSNILL---DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY 167
YLH GII+ DLKP N+LL +E+ K+ DFG ++ L + S L + CGTP Y
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------LMRTLCGTPTY 182
Query: 168 MAPELFEEGGVHSY--ASDLWGLGCVLYECYAGRPPF 202
+APE+ G Y A D W LG +L+ C +G PPF
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----------KVLQEVRML 50
++Y + + +G G V ++KT + AIK + K + + V E+ +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 51 HSLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQ 110
L+HP +++ ++++ + ++VLE GG+L + + +L E + + ++ A+Q
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 111 YLHSKGIIYCDLKPSNILL---DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY 167
YLH GII+ DLKP N+LL +E+ K+ DFG ++ L + S L + CGTP Y
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------LMRTLCGTPTY 182
Query: 168 MAPELFEEGGVHSY--ASDLWGLGCVLYECYAGRPPF 202
+APE+ G Y A D W LG +L+ C +G PPF
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 128/255 (50%), Gaps = 14/255 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
+G G V+K K + A K + + ++++++E+++LH + P ++ FY +
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK-GIIYCDLKP 124
+ + + +E+ GG L +L++ ++PE + ++ +++ L YL K I++ D+KP
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 136
Query: 125 SNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
SNIL++ G KLCDFG++ +L D + GT YM+PE +G +S SD
Sbjct: 137 SNILVNSRGEIKLCDFGVSGQLIDE-------MANEFVGTRSYMSPERL-QGTHYSVQSD 188
Query: 185 LWGLGCVLYECYAGRPPFVGREFTQLVKSILXX-XXXXXXXXXXXXFANLINSLLVKDPA 243
+W +G L E GR P +L+ I+ F + +N L+K+PA
Sbjct: 189 IWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPA 248
Query: 244 QRLHWSDLCGHAFWR 258
+R L HAF +
Sbjct: 249 ERADLKQLMVHAFIK 263
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----------KVLQEVRML 50
++Y + + +G G V ++KT + AIK + K + + V E+ +L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 51 HSLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQ 110
L+HP +++ ++++ + ++VLE GG+L + + +L E + + ++ A+Q
Sbjct: 69 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 111 YLHSKGIIYCDLKPSNILL---DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY 167
YLH GII+ DLKP N+LL +E+ K+ DFG ++ L + S L + CGTP Y
Sbjct: 128 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------LMRTLCGTPTY 181
Query: 168 MAPELFEEGGVHSY--ASDLWGLGCVLYECYAGRPPF 202
+APE+ G Y A D W LG +L+ C +G PPF
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----------KVLQEVRML 50
++Y + + +G G V ++KT + AIK + K + + V E+ +L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 51 HSLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQ 110
L+HP +++ ++++ + ++VLE GG+L + + +L E + + ++ A+Q
Sbjct: 76 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 111 YLHSKGIIYCDLKPSNILL---DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY 167
YLH GII+ DLKP N+LL +E+ K+ DFG ++ L + S L + CGTP Y
Sbjct: 135 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------LMRTLCGTPTY 188
Query: 168 MAPELFEEGGVHSY--ASDLWGLGCVLYECYAGRPPF 202
+APE+ G Y A D W LG +L+ C +G PPF
Sbjct: 189 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 121/273 (44%), Gaps = 13/273 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ------KSKVLQEVRMLHSLD 54
+ Y + + +G G + V G + T A+K +++ + K+ +E++ L
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP++++ Y T ++V+EY GG+L + + ++ E R L Q ++ A+ Y H
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+++ DLKP N+LLD + K+ DFGL+ +SD S CG+P Y APE+
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS------CGSPNYAAPEVIS 183
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
D+W G +LY G PF L K I A L+
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI-RGGVFYIPEYLNRSVATLL 242
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLP 267
+L DP +R D+ H +++ L P
Sbjct: 243 MHMLQVDPLKRATIKDIREHEWFKQDLPSYLFP 275
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 20/270 (7%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ------KSKVLQEVRMLHSLDH 55
++Y +G+G + V + K T + A+K + K Q K +L+EV++L LDH
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 91
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
PN+++ Y ++E + +LV E GG+L + + E + + ++ + Y+H
Sbjct: 92 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 151
Query: 116 GIIYCDLKPSNILLD---ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL 172
I++ DLKP N+LL+ ++ ++ DFGL+ + K + K GT Y+APE+
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM------KDKIGTAYYIAPEV 205
Query: 173 FEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX---XXXXXX 229
G + D+W G +LY +G PPF G ++K +
Sbjct: 206 LH--GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 263
Query: 230 FANLINSLLVKDPAQRLHWSDLCGHAFWRT 259
+LI +L P+ R+ D H + +T
Sbjct: 264 AKDLIRKMLTYVPSMRISARDALDHEWIQT 293
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 129/259 (49%), Gaps = 18/259 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
+G G V+K K + A K + + ++++++E+++LH + P ++ FY +
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK-GIIYCDLKP 124
+ + + +E+ GG L +L++ ++PE + ++ +++ L YL K I++ D+KP
Sbjct: 93 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 152
Query: 125 SNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
SNIL++ G KLCDFG++ +L D+ + + GT YM+PE +G +S SD
Sbjct: 153 SNILVNSRGEIKLCDFGVSGQLIDS-------MANSFVGTRSYMSPERL-QGTHYSVQSD 204
Query: 185 LWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXX-----XXXXXXXXXXFANLINSLLV 239
+W +G L E GR P + + +L F + +N L+
Sbjct: 205 IWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLI 264
Query: 240 KDPAQRLHWSDLCGHAFWR 258
K+PA+R L HAF +
Sbjct: 265 KNPAERADLKQLMVHAFIK 283
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV---LQEVRMLHSLDHPNVLR 60
+ I +G G + VYK + K+T A K +D + ++ + E+ +L S DHPN+++
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMS-LLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
+ +LW+++E+C GG + + +L + L E I+ + + + AL YLH II+
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF----EE 175
DLK NIL +G KL DFG++ K + + S + GTP +MAPE+ +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-----GTPYWMAPEVVMCETSK 213
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPP 201
+ Y +D+W LG L E PP
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
M Y + +G G Y+TVYKG+ K T A+K + ++ ++EV +L L H
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSK 115
N++ + T L LV EY + DL L N + +++ L+R L Y H +
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEY-LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 116 GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
+++ DLKP N+L++E G KL DFGLAR S +K + + T Y P++
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN-----EVVTLWYRPPDILLG 174
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVG 204
+S D+WG+GC+ YE GRP F G
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGRPLFPG 203
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 119/256 (46%), Gaps = 20/256 (7%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLD-HPNVLRFYSWYETS 68
+G G +S K KK+ + FA+K + K ++ +E+ L + HPN+++ + +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQ 78
Query: 69 AHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNIL 128
H +LV+E GG+L +++ E + + LV A+ ++H G+++ DLKP N+L
Sbjct: 79 LHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLL 138
Query: 129 L-DENG--RTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDL 185
DEN K+ DFG AR K P + + C T Y APEL + G + + DL
Sbjct: 139 FTDENDNLEIKIIDFGFAR-----LKPPDNQPLKTPCFTLHYAAPELLNQNG-YDESCDL 192
Query: 186 WGLGCVLYECYAGRPPFVGR----------EFTQLVKSILXXXXXXXXXXXXXXFANLIN 235
W LG +LY +G+ PF E + +K +LI
Sbjct: 193 WSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQ 252
Query: 236 SLLVKDPAQRLHWSDL 251
LL DP +RL S L
Sbjct: 253 GLLTVDPNKRLKMSGL 268
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 147/341 (43%), Gaps = 23/341 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ------KSKVLQEVRMLHSLDH 55
++Y +G+G + V + K T + A+K + K Q K +L+EV++L LDH
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
PN+ + Y ++E + +LV E GG+L + + E + + ++ + Y H
Sbjct: 86 PNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKN 145
Query: 116 GIIYCDLKPSNILLD---ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL 172
I++ DLKP N+LL+ ++ ++ DFGL+ + K K GT Y+APE+
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKD------KIGTAYYIAPEV 199
Query: 173 FEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXX---XXXXXX 229
G + D+W G +LY +G PPF G ++K +
Sbjct: 200 LH--GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 257
Query: 230 FANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSLKGAVRQDENSMLGS 289
+LI L P+ R+ D H + +T P+ D+ +RQ + + +
Sbjct: 258 AKDLIRKXLTYVPSXRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLA 317
Query: 290 TPVRVTPSGRKT---QTKTSGRVFEEKQKDPSGTTRQVNLL 327
+ + T +TK +F + K+ G + L+
Sbjct: 318 QAALLYXGSKLTSQDETKELTAIFHKXDKNGDGQLDRAELI 358
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 14/267 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDK------SQKSKVLQEVRMLHSLD 54
+ Y I + +G G + V T + A+K ++K + ++ +E+ L L
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 72
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP++++ Y ++ + +V+EY G +L + Q +++ E R Q ++ A++Y H
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 131
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
I++ DLKP N+LLDE+ K+ DFGL+ ++D + +S CG+P Y APE+
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS------CGSPNYAAPEVIS 185
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
D+W G +LY R PF L K+I A LI
Sbjct: 186 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI-SNGVYTLPKFLSPGAAGLI 244
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKL 261
+L+ +P R+ ++ +++ L
Sbjct: 245 KRMLIVNPLNRISIHEIMQDDWFKVDL 271
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIK------SVDKSQKSKVLQEVRMLHSLDHP 56
Y + + IGRG + V R K T + +A+K + +S + +E ++ + P
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
V++ + ++ +L++V+EY GGDL++L+ + +PE R ++V AL +HS G
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I+ D+KP N+LLD++G KL DFG K++ GTP Y++PE+ +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC----DTAVGTPDYISPEVLKSQ 249
Query: 177 GVHSYAS---DLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G Y D W +G LYE G PF I+
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV---LQEVRMLHSLDHPNVLR 60
+ I +G G + VYK + K+T A K +D + ++ + E+ +L S DHPN+++
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMS-LLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
+ +LW+++E+C GG + + +L + L E I+ + + + AL YLH II+
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF----EE 175
DLK NIL +G KL DFG++ K + + S + GTP +MAPE+ +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-----GTPYWMAPEVVMCETSK 213
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPP 201
+ Y +D+W LG L E PP
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIK------SVDKSQKSKVLQEVRMLHSLDHP 56
Y + + IGRG + V R K T + +A+K + +S + +E ++ + P
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
V++ + ++ +L++V+EY GGDL++L+ + +PE R ++V AL +HS G
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I+ D+KP N+LLD++G KL DFG K++ GTP Y++PE+ +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC----DTAVGTPDYISPEVLKSQ 249
Query: 177 GVHSYAS---DLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G Y D W +G LYE G PF I+
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIK------SVDKSQKSKVLQEVRMLHSLDHP 56
Y + + IGRG + V R K T + +A+K + +S + +E ++ + P
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 129
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
V++ + ++ +L++V+EY GGDL++L+ + +PE R ++V AL +HS G
Sbjct: 130 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFYTAEVVLALDAIHSMG 188
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I+ D+KP N+LLD++G KL DFG K++ GTP Y++PE+ +
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC----DTAVGTPDYISPEVLKSQ 244
Query: 177 GVHSYAS---DLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G Y D W +G LYE G PF I+
Sbjct: 245 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 286
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 14/267 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDK------SQKSKVLQEVRMLHSLD 54
+ Y I + +G G + V T + A+K ++K + ++ +E+ L L
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 71
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
HP++++ Y ++ + +V+EY G +L + Q +++ E R Q ++ A++Y H
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 130
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
I++ DLKP N+LLDE+ K+ DFGL+ ++D + +S CG+P Y APE+
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS------CGSPNYAAPEVIS 184
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLI 234
D+W G +LY R PF L K+I A LI
Sbjct: 185 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI-SNGVYTLPKFLSPGAAGLI 243
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKL 261
+L+ +P R+ ++ +++ L
Sbjct: 244 KRMLIVNPLNRISIHEIMQDDWFKVDL 270
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L CGT Y+APEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMCGTLPYVAPELLKRR 181
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 115/258 (44%), Gaps = 22/258 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
IG G + VY R + E AIK + S K +++EVR L L HPN +++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 64 WYETSAHLWLVLEYCVG--GDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
Y WLV+EYC+G DL+ + ++ L E I + ++ L YLHS +I+ D
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMIHRD 179
Query: 122 LKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE--LFEEGGVH 179
+K NILL E G KL DFG A + AP++ GTP +MAPE L + G +
Sbjct: 180 VKAGNILLSEPGLVKLGDFGSASIM-----APANXF----VGTPYWMAPEVILAMDEGQY 230
Query: 180 SYASDLWGLGCVLYECYAGRPP-FVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLL 238
D+W LG E +PP F + L F N ++S L
Sbjct: 231 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCL 290
Query: 239 VKDPAQRLHWSDLCGHAF 256
K P R L H F
Sbjct: 291 QKIPQDRPTSEVLLKHRF 308
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 131/265 (49%), Gaps = 24/265 (9%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
+G G V+K K + A K + + ++++++E+++LH + P ++ FY +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK-GIIYCDLKP 124
+ + + +E+ GG L +L++ ++PE + ++ +++ L YL K I++ D+KP
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 125 SNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
SNIL++ G KLCDFG++ +L D+ + + GT YM+PE +G +S SD
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDS-------MANSFVGTRSYMSPERL-QGTHYSVQSD 185
Query: 185 LWGLGCVLYECYAGR---PPFVGRE--------FTQLVKSILXXXXXXXXXXXXXXFANL 233
+W +G L E GR PP +E F L + F +
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 245
Query: 234 INSLLVKDPAQRLHWSDLCGHAFWR 258
+N L+K+PA+R L HAF +
Sbjct: 246 VNKCLIKNPAERADLKQLMVHAFIK 270
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 16/219 (7%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIK-----SVDKSQKSKVLQEVRMLHSLDHPNV 58
Y + +G G Y V R K T AIK SV S SK+L+EV +L LDHPN+
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 59 LRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
++ Y ++E + +LV+E GG+L + + E + + ++ + YLH I+
Sbjct: 99 MKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIV 158
Query: 119 YCDLKPSNILL---DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
+ DLKP N+LL +++ K+ DFGL+ + K + + GT Y+APE+ +
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM------KERLGTAYYIAPEVLRK 212
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSI 214
+ D+W +G +L+ AG PPF G+ ++++ +
Sbjct: 213 K--YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKV 249
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 109 bits (273), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 112/210 (53%), Gaps = 16/210 (7%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV--------LQEVRMLHSLD 54
+Y + +G G+++TVYK R K T + AIK + +S+ L+E+++L L
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDN-QLPEDSIRDLAQDLVRALQYLH 113
HPN++ + +++ LV ++ + DL +++ ++ L I+ ++ L+YLH
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDF-METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
I++ DLKP+N+LLDENG KL DFGLA+ ++A + T Y APEL
Sbjct: 130 QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXH-----QVVTRWYRAPELL 184
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFV 203
++ D+W +GC+L E R PF+
Sbjct: 185 FGARMYGVGVDMWAVGCILAELLL-RVPFL 213
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 109 bits (273), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 20/226 (8%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHPN 57
+Q+ E +G G Y+TVYKG K T Y A+K V ++ S ++E+ ++ L H N
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHEN 64
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
++R Y T L LV E+ + DL + D++ ++ R L +LV+ Q+ +G+
Sbjct: 65 IVRLYDVIHTENKLTLVFEF-MDNDLKKYM--DSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 118 IYC--------DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
+C DLKP N+L+++ G+ KL DFGLAR SS + T Y A
Sbjct: 122 AFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSS-----EVVTLWYRA 176
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
P++ +S + D+W GC+L E G+P F G + +K I
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF 222
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 15/207 (7%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV---LQEVRMLHSLDHPNVLR 60
+ I +G G + VYK + K+T A K ++ + ++ + E+ +L + DHP +++
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMS-LLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
Y LW+++E+C GG + + +L D L E I+ + + ++ AL +LHSK II+
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 132
Query: 120 CDLKPSNILLDENGRTKLCDFGL-ARKLSDASKAPSSMLPQAKCGTPCYMAPELF----E 174
DLK N+L+ G +L DFG+ A+ L K S + GTP +MAPE+
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMCETM 186
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPP 201
+ + Y +D+W LG L E PP
Sbjct: 187 KDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L CGT Y+APEL +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMCGTLPYVAPELLKRR 182
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 15/207 (7%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV---LQEVRMLHSLDHPNVLR 60
+ I +G G + VYK + K+T A K ++ + ++ + E+ +L + DHP +++
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMS-LLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
Y LW+++E+C GG + + +L D L E I+ + + ++ AL +LHSK II+
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 120 CDLKPSNILLDENGRTKLCDFGL-ARKLSDASKAPSSMLPQAKCGTPCYMAPELF----E 174
DLK N+L+ G +L DFG+ A+ L K S + GTP +MAPE+
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMCETM 194
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPP 201
+ + Y +D+W LG L E PP
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 115/258 (44%), Gaps = 22/258 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLRFYS 63
IG G + VY R + E AIK + S K +++EVR L L HPN +++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 64 WYETSAHLWLVLEYCVG--GDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
Y WLV+EYC+G DL+ + ++ L E I + ++ L YLHS +I+ D
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMIHRD 140
Query: 122 LKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE--LFEEGGVH 179
+K NILL E G KL DFG A + AP++ GTP +MAPE L + G +
Sbjct: 141 VKAGNILLSEPGLVKLGDFGSASIM-----APANXF----VGTPYWMAPEVILAMDEGQY 191
Query: 180 SYASDLWGLGCVLYECYAGRPP-FVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLL 238
D+W LG E +PP F + L F N ++S L
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCL 251
Query: 239 VKDPAQRLHWSDLCGHAF 256
K P R L H F
Sbjct: 252 QKIPQDRPTSEVLLKHRF 269
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L CGT Y+APEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMCGTLPYVAPELLKRR 181
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L CGT Y+APEL +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMCGTLPYVAPELLKRR 182
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L CGT Y+APEL +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMCGTLPYVAPELLKRR 182
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L CGT Y+APEL +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMCGTLPYVAPELLKRR 182
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L CGT Y+APEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMCGTLPYVAPELLKRR 181
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 127/294 (43%), Gaps = 41/294 (13%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ--------------------- 39
+NQY + + IG+G Y V + Y+A+K + K +
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 40 --------KSKVLQEVRMLHSLDHPNVLRFYSWYE--TSAHLWLVLEYCVGGDLMSLLRQ 89
+V QE+ +L LDHPNV++ + HL++V E G +M +
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL 131
Query: 90 DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDA 149
L ED R QDL++ ++YLH + II+ D+KPSN+L+ E+G K+ DFG++ +
Sbjct: 132 -KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG- 189
Query: 150 SKAPSSMLPQAKCGTPCYMAPELFEEGG--VHSYASDLWGLGCVLYECYAGRPPFVGREF 207
S L GTP +MAPE E A D+W +G LY G+ PF+
Sbjct: 190 ----SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245
Query: 208 TQLVKSILXXXXXX-XXXXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTK 260
L I +LI +L K+P R+ ++ H W T+
Sbjct: 246 MCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHP-WVTR 298
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L CGT Y+APEL +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMCGTLPYVAPELLKRR 180
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 116/223 (52%), Gaps = 15/223 (6%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDK------SQKSKVLQEVRMLHSLDHPN 57
+ I + IGRG + V + K + FA+K ++K ++ + +E +L + D
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKG 116
+ + ++ +L+LV++Y VGGDL++LL + +++LPE+ R ++V A+ +H
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE-- 174
++ D+KP NIL+D NG +L DFG KL + SS+ GTP Y++PE+ +
Sbjct: 196 YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSV----AVGTPDYISPEILQAM 251
Query: 175 EGGVHSYA--SDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
EGG Y D W LG +YE G PF + I+
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L CGT Y+APEL +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMCGTLPYVAPELLKRR 182
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L CGT Y+APEL +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMCGTLPYVAPELLKRR 182
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 13/206 (6%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV---LQEVRMLHSLDHPNVLR 60
+ I +G G + VYK + K+T A K +D + ++ + E+ +L S DHPN+++
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMS-LLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
+ +LW+++E+C GG + + +L + L E I+ + + + AL YLH II+
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF----EE 175
DLK NIL +G KL DFG++ K + + + GTP +MAPE+ +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-----GTPYWMAPEVVMCETSK 213
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPP 201
+ Y +D+W LG L E PP
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L CGT Y+APEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMCGTLPYVAPELLKRR 181
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L CGT Y+APEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMCGTLPYVAPELLKRR 181
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----------KVLQEVRML 50
++Y + + +G G V ++KT + AI+ + K + + V E+ +L
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 51 HSLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQ 110
L+HP +++ ++++ + ++VLE GG+L + + +L E + + ++ A+Q
Sbjct: 209 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 111 YLHSKGIIYCDLKPSNILL---DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY 167
YLH GII+ DLKP N+LL +E+ K+ DFG ++ L + S L + CGTP Y
Sbjct: 268 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------LMRTLCGTPTY 321
Query: 168 MAPELFEEGGVHSY--ASDLWGLGCVLYECYAGRPPF 202
+APE+ G Y A D W LG +L+ C +G PPF
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L CGT Y+APEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMCGTLPYVAPELLKRR 181
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L CGT Y+APEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMCGTLPYVAPELLKRR 181
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 27/231 (11%)
Query: 9 AIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK--SKVLQEVRMLHSLDHPNVLRFYS-WY 65
+G+G + V K R Y+AIK + +++ S +L EV +L SL+H V+R+Y+ W
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 66 E------------TSAHLWLVLEYCVGGDLMSLLRQDN-QLPEDSIRDLAQDLVRALQYL 112
E + L++ +EYC L L+ +N D L + ++ AL Y+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLS---DASKAPSSMLP------QAKCG 163
HS+GII+ DLKP NI +DE+ K+ DFGLA+ + D K S LP + G
Sbjct: 133 HSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
Query: 164 TPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSI 214
T Y+A E+ + G ++ D++ LG + +E P G E ++K +
Sbjct: 193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNILKKL 241
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 127/262 (48%), Gaps = 21/262 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHPNVLRFYSWY 65
+G G + V+ ++ + IK+++K + ++ E+ +L SLDHPN+++ + +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 66 ETSAHLWLVLEYCVGGDLM----SLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
E ++++V+E C GG+L+ S + L E + +L + ++ AL Y HS+ +++ D
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKD 149
Query: 122 LKPSNILLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
LKP NIL + + K+ DFGLA + ++ GT YMAPE+F+
Sbjct: 150 LKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA------AGTALYMAPEVFKRDV- 202
Query: 179 HSYASDLWGLGCVLYECYAGRPPFVGR--EFTQLVKSILXXXXXXXXXXXXXXFANLINS 236
++ D+W G V+Y G PF G E Q + +L+
Sbjct: 203 -TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQ 261
Query: 237 LLVKDPAQRLHWSDLCGHAFWR 258
+L KDP +R + + H +++
Sbjct: 262 MLTKDPERRPSAAQVLHHEWFK 283
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 111/225 (49%), Gaps = 13/225 (5%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDK-----SQKSKVLQEVRMLHSLDHP 56
++Y I E IG G Y V R++ T + AIK + + + L+E+++L H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 57 NV------LRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQ 110
N+ LR Y +++VL+ + DL ++ L + +R L+R L+
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLD-LMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLK 172
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAP 170
Y+HS +I+ DLKPSN+L++EN K+ DFG+AR L S A T Y AP
Sbjct: 173 YMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC-TSPAEHQYFMTEYVATRWYRAP 231
Query: 171 ELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
EL ++ A DLW +GC+ E A R F G+ + ++ I+
Sbjct: 232 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIM 276
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L CGT Y+APEL +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMCGTLPYVAPELLKRR 182
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 115/217 (52%), Gaps = 23/217 (10%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----------KVLQEVRML 50
++Y + + +G G V ++KT + AI+ + K + + V E+ +L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 51 HSLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQ 110
L+HP +++ ++++ + ++VLE GG+L + + +L E + + ++ A+Q
Sbjct: 195 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 111 YLHSKGIIYCDLKPSNILL---DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY 167
YLH GII+ DLKP N+LL +E+ K+ DFG ++ L + S L + CGTP Y
Sbjct: 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------LMRTLCGTPTY 307
Query: 168 MAPELFEEGGVHSY--ASDLWGLGCVLYECYAGRPPF 202
+APE+ G Y A D W LG +L+ C +G PPF
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 128/267 (47%), Gaps = 28/267 (10%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRM-LHSLDHPNVLRFYSW 64
IGRG Y +V K K + + A+K +VD+ ++ ++L ++ + + S D P +++FY
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 65 YETSAHLWLVLEYCVGG------DLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK-GI 117
W+ +E + S+L D+ +PE+ + + V+AL +L I
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVL--DDVIPEEILGKITLATVKALNHLKENLKI 147
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
I+ D+KPSNILLD +G KLCDFG++ +L D S+ G YMAPE +
Sbjct: 148 IHRDIKPSNILLDRSGNIKLCDFGISGQLVD------SIAKTRDAGCRPYMAPERIDPSA 201
Query: 178 V---HSYASDLWGLGCVLYECYAGRPPF-----VGREFTQLVKSILXXXXXXXXXXXXXX 229
+ SD+W LG LYE GR P+ V + TQ+VK
Sbjct: 202 SRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPS 261
Query: 230 FANLINSLLVKDPAQRLHWSDLCGHAF 256
F N +N L KD ++R + +L H F
Sbjct: 262 FINFVNLCLTKDESKRPKYKELLKHPF 288
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIK------SVDKSQKSKVLQEVRMLHSLDHP 56
Y + + IGRG + V R K + + +A+K + +S + +E ++ + P
Sbjct: 76 DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 135
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
V++ + ++ +L++V+EY GGDL++L+ + +PE + ++V AL +HS G
Sbjct: 136 WVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM-SNYDVPEKWAKFYTAEVVLALDAIHSMG 194
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
+I+ D+KP N+LLD++G KL DFG K+ + GTP Y++PE+ +
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCD----TAVGTPDYISPEVLKSQ 250
Query: 177 GVHSYAS---DLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
G Y D W +G L+E G PF I+
Sbjct: 251 GGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 292
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 111/225 (49%), Gaps = 13/225 (5%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDK-----SQKSKVLQEVRMLHSLDHP 56
++Y I E IG G Y V R++ T + AIK + + + L+E+++L H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 57 NV------LRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQ 110
N+ LR Y +++VL+ + DL ++ L + +R L+R L+
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLD-LMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLK 173
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAP 170
Y+HS +I+ DLKPSN+L++EN K+ DFG+AR L S A T Y AP
Sbjct: 174 YMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC-TSPAEHQYFMTEYVATRWYRAP 232
Query: 171 ELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
EL ++ A DLW +GC+ E A R F G+ + ++ I+
Sbjct: 233 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIM 277
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 134/297 (45%), Gaps = 38/297 (12%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---KSKVLQEVRMLHSLD-HPNVLRFYS 63
+ +G G ++ V T + +A+K ++K +S+V +EV ML+ H NVL
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++E +LV E GG ++S + + E + QD+ AL +LH+KGI + DLK
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLK 138
Query: 124 PSNILLDENGR---TKLCDFGLARKL---SDAS--KAPSSMLPQAKCGTPCYMAPELF-- 173
P NIL + + K+CDFGL + D S P + P CG+ YMAPE+
Sbjct: 139 PENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTP---CGSAEYMAPEVVEA 195
Query: 174 --EEGGVHSYASDLWGLGCVLYECYAGRPPFVGR----------EFTQLVKSILXXXXXX 221
EE ++ DLW LG +LY +G PPFVGR E +++L
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255
Query: 222 XX--------XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPPQP 270
+LI+ LLV+D QRL + + H W P P P
Sbjct: 256 GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP-WVQGCAPENTLPTP 311
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 107 bits (267), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 13/210 (6%)
Query: 1 MNQYHIYEAIGR-GKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV---LQEVRMLHSLDHP 56
+N +E IG G + VYK + K+T A K +D + ++ + E+ +L S DHP
Sbjct: 8 LNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP 67
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMS-LLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
N+++ + +LW+++E+C GG + + +L + L E I+ + + + AL YLH
Sbjct: 68 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 127
Query: 116 GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF-- 173
II+ DLK NIL +G KL DFG++ K + GTP +MAPE+
Sbjct: 128 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSF----IGTPYWMAPEVVMC 183
Query: 174 --EEGGVHSYASDLWGLGCVLYECYAGRPP 201
+ + Y +D+W LG L E PP
Sbjct: 184 ETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 13/211 (6%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS---QKSKVLQEVRMLHSLD-HPNVLRFYS 63
E +G G Y+ V + + +A+K ++K +S+V +EV L+ + N+L
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++E +LV E GG +++ +++ E + +D+ AL +LH+KGI + DLK
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLK 138
Query: 124 PSNILLDENGR---TKLCDF--GLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE---- 174
P NIL + + K+CDF G KL+++ ++ CG+ YMAPE+ E
Sbjct: 139 PENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTD 198
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGR 205
+ + DLW LG VLY +G PPFVG
Sbjct: 199 QATFYDKRCDLWSLGVVLYIMLSGYPPFVGH 229
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 106 bits (264), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L GT Y+APEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMXGTLPYVAPELLKRR 181
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 106 bits (264), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ V DL + + +P I+ L++ L + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEH-VHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + + T Y APE+
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 174
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L GT Y+APEL +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMXGTLPYVAPELLKRR 182
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G V + T E A+K VD + + +E+ + L+H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L CGT Y+APEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMCGTLPYVAPELLKRR 181
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + + T Y APE+
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 175
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + + T Y APE+
Sbjct: 128 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 182
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 222
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L GT Y+APEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMXGTLPYVAPELLKRR 181
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + + T Y APE+
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 175
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L GT Y+APEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMXGTLPYVAPELLKRR 181
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + + T Y APE+
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 176
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 216
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + + T Y APE+
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 175
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + + T Y APE+
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 174
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + + T Y APE+
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 175
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK----SKVLQEVRMLHSLDHP 56
+ + + + +G G Y V + T E A+K VD + + +E+ + L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV++FY +L LEYC GG+L + D +PE + L+ + YLH G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I + D+KP N+LLDE K+ DFGLA ++ L GT Y+APEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR---ERLLNKMXGTLPYVAPELLKRR 181
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
H+ D+W G VL AG P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + + T Y APE+
Sbjct: 125 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 179
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 219
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + + T Y APE+
Sbjct: 128 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 182
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 222
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 18/256 (7%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHP 56
+ Y + E +G+G +S V + K T FA K ++ + S K+ +E R+ L HP
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 88
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
N++R + + + +LV + GG+L + E Q ++ ++ Y HS G
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 148
Query: 117 IIYCDLKPSNILLDENGR---TKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
I++ +LKP N+LL + KL DFGLA +++D S GTP Y++PE+
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND------SEAWHGFAGTPGYLSPEVL 202
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQL---VKSILXXXXXXXXXXXXXXF 230
++ +S D+W G +LY G PPF + +L +K+
Sbjct: 203 KK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 261
Query: 231 ANLINSLLVKDPAQRL 246
+LI+S+L +P +R+
Sbjct: 262 KSLIDSMLTVNPKKRI 277
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ V DL + +P I+ L++ L + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEH-VDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + + +P I+ L++ L + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEF-LHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 133/297 (44%), Gaps = 38/297 (12%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ---KSKVLQEVRMLHSLD-HPNVLRFYS 63
+ +G G ++ V T + +A+K ++K +S+V +EV ML+ H NVL
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++E +LV E GG ++S + + E + QD+ AL +LH+KGI + DLK
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLK 138
Query: 124 PSNILLDENGR---TKLCDFGLARKL---SDAS--KAPSSMLPQAKCGTPCYMAPELF-- 173
P NIL + + K+CDF L + D S P + P CG+ YMAPE+
Sbjct: 139 PENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTP---CGSAEYMAPEVVEA 195
Query: 174 --EEGGVHSYASDLWGLGCVLYECYAGRPPFVGR----------EFTQLVKSILXXXXXX 221
EE ++ DLW LG +LY +G PPFVGR E +++L
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255
Query: 222 XX--------XXXXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPPQP 270
+LI+ LLV+D QRL + + H W P P P
Sbjct: 256 GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP-WVQGCAPENTLPTP 311
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 113/221 (51%), Gaps = 29/221 (13%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEV---RMLHSL 53
++Y IG G Y TVYK R + + A+KSV ++ ++EV R L +
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 54 DHPNVLRFYSWYETS-----AHLWLVLEYCVGGDLMSLLRQDNQ--LPEDSIRDLAQDLV 106
+HPNV+R TS + LV E+ V DL + L + LP ++I+DL + +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 107 RALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTP 165
R L +LH+ I++ DLKP NIL+ G KL DFGLAR S + AP + T
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV-------TL 175
Query: 166 CYMAPELFEEGGVHSYAS--DLWGLGCVLYECYAGRPPFVG 204
Y APE+ + +YA+ D+W +GC+ E + +P F G
Sbjct: 176 WYRAPEVLLQS---TYATPVDMWSVGCIFAEMFRRKPLFCG 213
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEF-LSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 177
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 217
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEF-LSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 27/231 (11%)
Query: 9 AIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK--SKVLQEVRMLHSLDHPNVLRFYS-WY 65
+G+G + V K R Y+AIK + +++ S +L EV +L SL+H V+R+Y+ W
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 66 E------------TSAHLWLVLEYCVGGDLMSLLRQDN-QLPEDSIRDLAQDLVRALQYL 112
E + L++ EYC L L+ +N D L + ++ AL Y+
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLS---DASKAPSSMLP------QAKCG 163
HS+GII+ +LKP NI +DE+ K+ DFGLA+ + D K S LP + G
Sbjct: 133 HSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
Query: 164 TPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSI 214
T Y+A E+ + G ++ D + LG + +E P G E ++K +
Sbjct: 193 TAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY--PFSTGXERVNILKKL 241
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEF-LSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 124 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEF-LSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 176
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 216
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 110/220 (50%), Gaps = 27/220 (12%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEV---RMLHSL 53
++Y IG G Y TVYK R + + A+KSV ++ ++EV R L +
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 54 DHPNVLRFYSWYETS-----AHLWLVLEYCVGGDLMSLLRQDNQ--LPEDSIRDLAQDLV 106
+HPNV+R TS + LV E+ V DL + L + LP ++I+DL + +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 107 RALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC 166
R L +LH+ I++ DLKP NIL+ G KL DFGLAR S M T
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS------YQMALDPVVVTLW 176
Query: 167 YMAPELFEEGGVHSYAS--DLWGLGCVLYECYAGRPPFVG 204
Y APE+ + +YA+ D+W +GC+ E + +P F G
Sbjct: 177 YRAPEVLLQS---TYATPVDMWSVGCIFAEMFRRKPLFCG 213
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 175
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 176
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 216
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 21/224 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS------QKSKVLQEVRMLHSLDH 55
++Y + +G G Y V + K T AIK + KS +L EV +L LDH
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 63
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMS--LLRQDNQLPEDSIRDLAQDLVRALQYLH 113
PN+++ Y ++E + +LV+E GG+L +LRQ + E + + ++ YLH
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ--KFSEVDAAVIMKQVLSGTTYLH 121
Query: 114 SKGIIYCDLKPSNILLDENGR---TKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAP 170
I++ DLKP N+LL+ R K+ DFGL+ K + + GT Y+AP
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM------KERLGTAYYIAP 175
Query: 171 ELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSI 214
E+ + + D+W G +LY G PPF G+ +++K +
Sbjct: 176 EVLRKK--YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 217
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 125 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 179
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 219
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 113/221 (51%), Gaps = 28/221 (12%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRK-KKTIEYFAIKSV-----DKSQKSKVLQEV---RMLHS 52
QY IG G Y V+K R K + A+K V ++ ++EV R L +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 53 LDHPNVLRFY-----SWYETSAHLWLVLEYCVGGDLMSLLRQ--DNQLPEDSIRDLAQDL 105
+HPNV+R + S + L LV E+ V DL + L + + +P ++I+D+ L
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 106 VRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTP 165
+R L +LHS +++ DLKP NIL+ +G+ KL DFGLAR S S ++ T
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV------TL 183
Query: 166 CYMAPELFEEGGVHSYAS--DLWGLGCVLYECYAGRPPFVG 204
Y APE+ + SYA+ DLW +GC+ E + +P F G
Sbjct: 184 WYRAPEVLLQS---SYATPVDLWSVGCIFAEMFRRKPLFRG 221
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 177
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 217
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 174
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 174
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 175
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-LHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 121 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 175
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 175
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 177
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 217
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 175
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 124/260 (47%), Gaps = 26/260 (10%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ------KSKVLQEVRMLHSLDH 55
N + Y +G+G + V + + T + +A K ++K + ++ L E ++L ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQ--LPEDSIRDLAQDLVRALQYLH 113
V+ YET L LVL GGDL + Q PE A ++ L+ LH
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
+ I+Y DLKP NILLD++G ++ D GL A P + + GT YMAPE+
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGL------AVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGR-------EFTQLVKSILXXXXXXXXXXX 226
+ ++++ D W LGC+LYE AG+ PF R E +LVK +
Sbjct: 358 -KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQA 416
Query: 227 XXXFANLINSLLVKDPAQRL 246
+L + LL KDPA+RL
Sbjct: 417 R----SLCSQLLCKDPAERL 432
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 176
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 216
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 176
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 113/221 (51%), Gaps = 28/221 (12%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRK-KKTIEYFAIKSV-----DKSQKSKVLQEV---RMLHS 52
QY IG G Y V+K R K + A+K V ++ ++EV R L +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 53 LDHPNVLRFY-----SWYETSAHLWLVLEYCVGGDLMSLLRQ--DNQLPEDSIRDLAQDL 105
+HPNV+R + S + L LV E+ V DL + L + + +P ++I+D+ L
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 106 VRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTP 165
+R L +LHS +++ DLKP NIL+ +G+ KL DFGLAR S S ++ T
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV------TL 183
Query: 166 CYMAPELFEEGGVHSYAS--DLWGLGCVLYECYAGRPPFVG 204
Y APE+ + SYA+ DLW +GC+ E + +P F G
Sbjct: 184 WYRAPEVLLQS---SYATPVDLWSVGCIFAEMFRRKPLFRG 221
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+K + + S ++E+ +L L+H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + T Y APE+
Sbjct: 123 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 177
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 217
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 124/260 (47%), Gaps = 26/260 (10%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ------KSKVLQEVRMLHSLDH 55
N + Y +G+G + V + + T + +A K ++K + ++ L E ++L ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQ--LPEDSIRDLAQDLVRALQYLH 113
V+ YET L LVL GGDL + Q PE A ++ L+ LH
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
+ I+Y DLKP NILLD++G ++ D GL A P + + GT YMAPE+
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGL------AVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGR-------EFTQLVKSILXXXXXXXXXXX 226
+ ++++ D W LGC+LYE AG+ PF R E +LVK +
Sbjct: 358 -KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQA 416
Query: 227 XXXFANLINSLLVKDPAQRL 246
+L + LL KDPA+RL
Sbjct: 417 R----SLCSQLLCKDPAERL 432
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 113/221 (51%), Gaps = 28/221 (12%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRK-KKTIEYFAIKSV-----DKSQKSKVLQEV---RMLHS 52
QY IG G Y V+K R K + A+K V ++ ++EV R L +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 53 LDHPNVLRFY-----SWYETSAHLWLVLEYCVGGDLMSLLRQ--DNQLPEDSIRDLAQDL 105
+HPNV+R + S + L LV E+ V DL + L + + +P ++I+D+ L
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 106 VRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTP 165
+R L +LHS +++ DLKP NIL+ +G+ KL DFGLAR S S ++ T
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV------TL 183
Query: 166 CYMAPELFEEGGVHSYAS--DLWGLGCVLYECYAGRPPFVG 204
Y APE+ + SYA+ DLW +GC+ E + +P F G
Sbjct: 184 WYRAPEVLLQS---SYATPVDLWSVGCIFAEMFRRKPLFRG 221
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 17/266 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHP 56
++Y ++E +G+G +S V + K T + +A K ++ + S K+ +E R+ L HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
N++R + +LV + GG+L + E Q ++ ++ + H G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 117 IIYCDLKPSNILLDENGR---TKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
I++ DLKP N+LL + KL DFGLA ++ +A GTP Y++PE+
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGF-----AGTPGYLSPEVL 178
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE---FTQLVKSILXXXXXXXXXXXXXXF 230
+ + D+W G +LY G PPF + Q +K+
Sbjct: 179 RKDP-YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 231 ANLINSLLVKDPAQRLHWSDLCGHAF 256
+LIN +L +PA+R+ S+ H +
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPW 263
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 112/220 (50%), Gaps = 27/220 (12%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEV---RMLHSL 53
++Y IG G Y TVYK R + + A+KSV ++ ++EV R L +
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 54 DHPNVLRFYSWYETS-----AHLWLVLEYCVGGDLMSLLRQDNQ--LPEDSIRDLAQDLV 106
+HPNV+R TS + LV E+ V DL + L + LP ++I+DL + +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 107 RALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC 166
R L +LH+ I++ DLKP NIL+ G KL DFGLAR S ++ P T
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ----MALFPVVV--TLW 176
Query: 167 YMAPELFEEGGVHSYAS--DLWGLGCVLYECYAGRPPFVG 204
Y APE+ + +YA+ D+W +GC+ E + +P F G
Sbjct: 177 YRAPEVLLQS---TYATPVDMWSVGCIFAEMFRRKPLFCG 213
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 102/213 (47%), Gaps = 14/213 (6%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDHPNVLRFY 62
E IG G Y VYK R K T E A+K + + S ++E+ +L L+HPN+++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
T L+LV E+ + DL + +P I+ L++ L + HS +++
Sbjct: 68 DVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKP N+L++ G KL DFGLAR + + + T Y APE+ +S
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEILLGCKYYS 181
Query: 181 YASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
A D+W LGC+ E R F G E QL +
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 17/222 (7%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS------QKSKVLQEVRMLHSLDH 55
++Y + +G G Y V + K T AIK + KS +L EV +L LDH
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 80
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
PN+++ Y ++E + +LV+E GG+L + + E + + ++ YLH
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH 140
Query: 116 GIIYCDLKPSNILLDENGR---TKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL 172
I++ DLKP N+LL+ R K+ DFGL+ K + + GT Y+APE+
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM------KERLGTAYYIAPEV 194
Query: 173 FEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSI 214
+ + D+W G +LY G PPF G+ +++K +
Sbjct: 195 LRKK--YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 16/212 (7%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS----KVLQEVRMLHSLDHPNVLRFYSW- 64
+G G Y V K T E AIK ++ K + L+E+++L H N++ ++
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 65 ----YETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
+E ++++ E + DL ++ L +D I+ +RA++ LH +I+
Sbjct: 79 RPDSFENFNEVYIIQE-LMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAK-----CGTPCYMAPELFEE 175
DLKPSN+L++ N K+CDFGLAR + +++ S Q T Y APE+
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLT 196
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
+S A D+W GC+L E + RP F GR++
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS----KVLQEVRMLHSLDHPNVLRFYSW- 64
+G G Y V K T E AIK ++ K + L+E+++L H N++ ++
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 65 ----YETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
+E ++++ E + DL ++ L +D I+ +RA++ LH +I+
Sbjct: 79 RPDSFENFNEVYIIQE-LMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCG------TPCYMAPELFE 174
DLKPSN+L++ N K+CDFGLAR + D S A +S + G T Y APE+
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLAR-IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVML 195
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
+S A D+W GC+L E + RP F GR++
Sbjct: 196 TSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 18/256 (7%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHP 56
+ Y + E +G+G +S V + K T FA K ++ + S K+ +E R+ L HP
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
N++R + + + +LV + GG+L + E Q ++ ++ Y HS G
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 117 IIYCDLKPSNILLDENGR---TKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
I++ +LKP N+LL + KL DFGLA +++D S GTP Y++PE+
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND------SEAWHGFAGTPGYLSPEVL 179
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQL---VKSILXXXXXXXXXXXXXXF 230
++ +S D+W G +LY G PPF + +L +K+
Sbjct: 180 KKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 238
Query: 231 ANLINSLLVKDPAQRL 246
+LI+S+L +P +R+
Sbjct: 239 KSLIDSMLTVNPKKRI 254
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+ + + S ++E+ +L L+H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + + T Y APE+
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 175
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 215
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M + E IG G Y VYK R K T E A+ + + S ++E+ +L L+H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLH 113
PN+++ T L+LV E+ + DL + +P I+ L++ L + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKP N+L++ G KL DFGLAR + + + T Y APE+
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 174
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S A D+W LGC+ E R F G E QL +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 16/212 (7%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS----KVLQEVRMLHSLDHPNVLRFYSW- 64
+G G Y V K T E AIK ++ K + L+E+++L H N++ ++
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 65 ----YETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
+E ++++ E + DL ++ L +D I+ +RA++ LH +I+
Sbjct: 79 RPDSFENFNEVYIIQE-LMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAK-----CGTPCYMAPELFEE 175
DLKPSN+L++ N K+CDFGLAR + +++ S Q T Y APE+
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLT 196
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
+S A D+W GC+L E + RP F GR++
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 18/256 (7%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHP 56
+ Y + E +G+G +S V + K T FA K ++ + S K+ +E R+ L HP
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 64
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
N++R + + + +LV + GG+L + E Q ++ ++ Y HS G
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 124
Query: 117 IIYCDLKPSNILLDENGR---TKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
I++ +LKP N+LL + KL DFGLA +++D S GTP Y++PE+
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND------SEAWHGFAGTPGYLSPEVL 178
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQL---VKSILXXXXXXXXXXXXXXF 230
++ +S D+W G +LY G PPF + +L +K+
Sbjct: 179 KKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 237
Query: 231 ANLINSLLVKDPAQRL 246
+LI+S+L +P +R+
Sbjct: 238 KSLIDSMLTVNPKKRI 253
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 98/209 (46%), Gaps = 10/209 (4%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M +Y +G G Y V K R K T AIK DK K ++E+++L L H
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH 83
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
N++ + +LV E+ L L N L ++ ++ + + HS
Sbjct: 84 ENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH 143
Query: 116 GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
II+ D+KP NIL+ ++G KLCDFG AR L+ AP + + T Y APEL
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLA----APGEVYDD-EVATRWYRAPELLVG 198
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVG 204
+ A D+W +GC++ E + G P F G
Sbjct: 199 DVKYGKAVDVWAIGCLVTEMFMGEPLFPG 227
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 40 KSKVLQEVRMLHSLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIR 99
++++++E+++LH + P ++ FY + + + + +E+ GG L +L++ ++PE+ +
Sbjct: 58 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG 117
Query: 100 DLAQDLVRALQYLHSKG-IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLP 158
++ ++R L YL K I++ D+KPSNIL++ G KLCDFG++ +L D+ +
Sbjct: 118 KVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-------MA 170
Query: 159 QAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
+ GT YMAPE +G +S SD+W +G L E GR P
Sbjct: 171 NSFVGTRSYMAPERL-QGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 18/256 (7%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHP 56
+ Y + E +G+G +S V + K T FA K ++ + S K+ +E R+ L HP
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
N++R + + + +LV + GG+L + E Q ++ ++ Y HS G
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 117 IIYCDLKPSNILLDENGR---TKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
I++ +LKP N+LL + KL DFGLA +++D+ GTP Y++PE+
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW------HGFAGTPGYLSPEVL 179
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQL---VKSILXXXXXXXXXXXXXXF 230
++ +S D+W G +LY G PPF + +L +K+
Sbjct: 180 KKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 238
Query: 231 ANLINSLLVKDPAQRL 246
+LI+S+L +P +R+
Sbjct: 239 KSLIDSMLTVNPKKRI 254
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 27/230 (11%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK----------------VLQEV 47
Y +G G Y V ++K AIK + KSQ K + E+
Sbjct: 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEI 97
Query: 48 RMLHSLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVR 107
+L SLDHPN+++ + +E + +LV E+ GG+L + ++ E ++ + ++
Sbjct: 98 SLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILS 157
Query: 108 ALQYLHSKGIIYCDLKPSNILLDENG---RTKLCDFGLARKLSDASKAPSSMLPQAKCGT 164
+ YLH I++ D+KP NILL+ K+ DFGL+ S K + GT
Sbjct: 158 GICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL------GT 211
Query: 165 PCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSI 214
Y+APE+ ++ ++ D+W G ++Y G PPF G+ ++K +
Sbjct: 212 AYYIAPEVLKKK--YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 9/205 (4%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKK--TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLR 60
Q + + IG G + TVYKG+ ++ + + Q EV +L H N+L
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
F Y T+ L +V ++C G L L + + + D+A+ R + YLH+K II+
Sbjct: 85 FMG-YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 143
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL--FEEGG 177
DLK +NI L E+ K+ DFGLA ++ S+ S + G+ +MAPE+ ++
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLA---TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 178 VHSYASDLWGLGCVLYECYAGRPPF 202
+S+ SD++ G VLYE G+ P+
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 17/266 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHP 56
++Y ++E +G+G +S V + K T + +A K ++ + S K+ +E R+ L HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
N++R + +LV + GG+L + E Q ++ ++ + H G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 117 IIYCDLKPSNILLDENGR---TKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
I++ DLKP N+LL + KL DFGLA ++ +A GTP Y++PE+
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGF-----AGTPGYLSPEVL 178
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE---FTQLVKSILXXXXXXXXXXXXXXF 230
+ + D+W G +LY G PPF + Q +K+
Sbjct: 179 RKDP-YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 231 ANLINSLLVKDPAQRLHWSDLCGHAF 256
+LIN +L +PA+R+ S+ H +
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPW 263
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 132/275 (48%), Gaps = 25/275 (9%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ--------KSKVLQEVRMLHSLDH 55
Y + E IG+G +S V + ++T + FA+K VD ++ + +E + H L H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDL-MSLLRQDNQ---LPEDSIRDLAQDLVRALQY 111
P+++ Y + L++V E+ G DL ++++ + E + ++ AL+Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 112 LHSKGIIYCDLKPSNILL---DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
H II+ D+KP N+LL + + KL DFG+A +L + S ++ + GTP +M
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGE-----SGLVAGGRVGTPHFM 200
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXXXX 225
APE+ + + D+WG G +L+ +G PF G R F ++K
Sbjct: 201 APEVVKREP-YGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHI 259
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTK 260
+L+ +L+ DPA+R+ + H + + +
Sbjct: 260 SESA-KDLVRRMLMLDPAERITVYEALNHPWLKER 293
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 108/223 (48%), Gaps = 30/223 (13%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--------KVLQEV---RML 50
++Y IG G Y TVYK R + + A+KSV ++EV R L
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68
Query: 51 HSLDHPNVLRFYSWYETS-----AHLWLVLEYCVGGDLMSLLRQDNQ--LPEDSIRDLAQ 103
+ +HPNV+R TS + LV E+ V DL + L + LP ++I+DL +
Sbjct: 69 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIKDLMR 127
Query: 104 DLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCG 163
+R L +LH+ I++ DLKP NIL+ G KL DFGLAR S M
Sbjct: 128 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS------YQMALTPVVV 181
Query: 164 TPCYMAPELFEEGGVHSYAS--DLWGLGCVLYECYAGRPPFVG 204
T Y APE+ + +YA+ D+W +GC+ E + +P F G
Sbjct: 182 TLWYRAPEVLLQS---TYATPVDMWSVGCIFAEMFRRKPLFCG 221
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 9/205 (4%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKK--TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLR 60
Q + + IG G + TVYKG+ ++ + + Q EV +L H N+L
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
F Y T L +V ++C G L L + + + D+A+ R + YLH+K II+
Sbjct: 85 FMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 143
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL--FEEGG 177
DLK +NI L E+ K+ DFGLA ++ S+ S + G+ +MAPE+ ++
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLA---TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 178 VHSYASDLWGLGCVLYECYAGRPPF 202
+S+ SD++ G VLYE G+ P+
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 10/201 (4%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ----KSKVLQEVRMLHSLDHPNVLRFYS 63
E IGRG + V+ GR + A+KS ++ K+K LQE R+L HPN++R
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDN-QLPEDSIRDLAQDLVRALQYLHSKGIIYCDL 122
+++V+E GGD ++ LR + +L ++ + D ++YL SK I+ DL
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDL 239
Query: 123 KPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA 182
N L+ E K+ DFG++R+ +D A S L Q + APE G +S
Sbjct: 240 AARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK---WTAPEALNY-GRYSSE 295
Query: 183 SDLWGLGCVLYECYA-GRPPF 202
SD+W G +L+E ++ G P+
Sbjct: 296 SDVWSFGILLWETFSLGASPY 316
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 112/214 (52%), Gaps = 17/214 (7%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDK------SQKSKVLQEVRMLHSLDH 55
+ + I + IGRG +S V + K+T + +A+K ++K + S +E +L + D
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHS 114
+ + + ++ +L+LV+EY VGGDL++LL + ++P + R ++V A+ +H
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR 180
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
G ++ D+KP NILLD G +L DFG KL +A ++ GTP Y++PE+ +
Sbjct: 181 LGYVHRDIKPDNILLDRCGHIRLADFGSCLKL----RADGTVRSLVAVGTPDYLSPEILQ 236
Query: 175 EGGVHSYAS------DLWGLGCVLYECYAGRPPF 202
G D W LG YE + G+ PF
Sbjct: 237 AVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 10/201 (4%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ----KSKVLQEVRMLHSLDHPNVLRFYS 63
E IGRG + V+ GR + A+KS ++ K+K LQE R+L HPN++R
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDN-QLPEDSIRDLAQDLVRALQYLHSKGIIYCDL 122
+++V+E GGD ++ LR + +L ++ + D ++YL SK I+ DL
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDL 239
Query: 123 KPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA 182
N L+ E K+ DFG++R+ +D A S L Q + APE G +S
Sbjct: 240 AARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK---WTAPEALNY-GRYSSE 295
Query: 183 SDLWGLGCVLYECYA-GRPPF 202
SD+W G +L+E ++ G P+
Sbjct: 296 SDVWSFGILLWETFSLGASPY 316
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 13/198 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
+G G V+K K + A K + + ++++++E+++LH + P ++ FY +
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK-GIIYCDLKP 124
+ + + +E+ GG L +L++ ++PE + ++ +++ L YL K I++ D+KP
Sbjct: 136 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 195
Query: 125 SNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
SNIL++ G KLCDFG++ +L D+ + + GT YM+PE +G +S SD
Sbjct: 196 SNILVNSRGEIKLCDFGVSGQLIDS-------MANSFVGTRSYMSPERL-QGTHYSVQSD 247
Query: 185 LWGLGCVLYECYAGRPPF 202
+W +G L E GR P
Sbjct: 248 IWSMGLSLVEMAVGRYPI 265
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 129/259 (49%), Gaps = 18/259 (6%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFA---IKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSW 64
E +G G++ V+K + T A IK+ K +V E+ +++ LDH N+++ Y
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 65 YETSAHLWLVLEYCVGGDLMS-LLRQDNQLPE-DSIRDLAQDLVRALQYLHSKGIIYCDL 122
+E+ + LV+EY GG+L ++ + L E D+I + Q + ++++H I++ DL
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ-ICEGIRHMHQMYILHLDL 213
Query: 123 KPSNILL--DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
KP NIL + + K+ DFGLAR+ P L + GTP ++APE+ V S
Sbjct: 214 KPENILCVNRDAKQIKIIDFGLARRYK-----PREKL-KVNFGTPEFLAPEVVNYDFV-S 266
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILX---XXXXXXXXXXXXXFANLINSL 237
+ +D+W +G + Y +G PF+G + + +IL I+ L
Sbjct: 267 FPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKL 326
Query: 238 LVKDPAQRLHWSDLCGHAF 256
L+K+ + R+ S+ H +
Sbjct: 327 LIKEKSWRISASEALKHPW 345
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 108/197 (54%), Gaps = 13/197 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
+G G V+K K + A K + + ++++++E+++LH + P ++ FY +
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK-GIIYCDLKP 124
+ + + +E+ GG L +L++ ++PE + ++ +++ L YL K I++ D+KP
Sbjct: 101 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 160
Query: 125 SNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
SNIL++ G KLCDFG++ +L D+ + + GT YM+PE +G +S SD
Sbjct: 161 SNILVNSRGEIKLCDFGVSGQLIDS-------MANSFVGTRSYMSPERL-QGTHYSVQSD 212
Query: 185 LWGLGCVLYECYAGRPP 201
+W +G L E GR P
Sbjct: 213 IWSMGLSLVEMAVGRYP 229
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 129/264 (48%), Gaps = 24/264 (9%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRM-LHSLDHPNVLRFYSW 64
+GRG Y V K R + + A+K +V+ ++ ++L ++ + + ++D P + FY
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 65 YETSAHLWLVLEY---CVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK-GIIYC 120
+W+ +E + ++ + +PED + +A +V+AL++LHSK +I+
Sbjct: 119 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 178
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA-----PELFEE 175
D+KPSN+L++ G+ K+CDFG++ L D S+ G YMA PEL ++
Sbjct: 179 DVKPSNVLINALGQVKMCDFGISGYLVD------SVAKTIDAGCKPYMAPERINPELNQK 232
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPF--VGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
G +S SD+W LG + E R P+ G F QL + + F +
Sbjct: 233 G--YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDF 290
Query: 234 INSLLVKDPAQRLHWSDLCGHAFW 257
+ L K+ +R + +L H F+
Sbjct: 291 TSQCLKKNSKERPTYPELMQHPFF 314
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 108/197 (54%), Gaps = 13/197 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
+G G V+K K + A K + + ++++++E+++LH + P ++ FY +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK-GIIYCDLKP 124
+ + + +E+ GG L +L++ ++PE + ++ +++ L YL K I++ D+KP
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 125 SNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
SNIL++ G KLCDFG++ +L D+ + + GT YM+PE +G +S SD
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDS-------MANSFVGTRSYMSPERL-QGTHYSVQSD 185
Query: 185 LWGLGCVLYECYAGRPP 201
+W +G L E GR P
Sbjct: 186 IWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 108/197 (54%), Gaps = 13/197 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
+G G V+K K + A K + + ++++++E+++LH + P ++ FY +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK-GIIYCDLKP 124
+ + + +E+ GG L +L++ ++PE + ++ +++ L YL K I++ D+KP
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 125 SNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
SNIL++ G KLCDFG++ +L D+ + + GT YM+PE +G +S SD
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDS-------MANSFVGTRSYMSPERL-QGTHYSVQSD 185
Query: 185 LWGLGCVLYECYAGRPP 201
+W +G L E GR P
Sbjct: 186 IWSMGLSLVEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 108/197 (54%), Gaps = 13/197 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
+G G V+K K + A K + + ++++++E+++LH + P ++ FY +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK-GIIYCDLKP 124
+ + + +E+ GG L +L++ ++PE + ++ +++ L YL K I++ D+KP
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 125 SNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
SNIL++ G KLCDFG++ +L D+ + + GT YM+PE +G +S SD
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDS-------MANSFVGTRSYMSPERL-QGTHYSVQSD 185
Query: 185 LWGLGCVLYECYAGRPP 201
+W +G L E GR P
Sbjct: 186 IWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 108/197 (54%), Gaps = 13/197 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
+G G V+K K + A K + + ++++++E+++LH + P ++ FY +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK-GIIYCDLKP 124
+ + + +E+ GG L +L++ ++PE + ++ +++ L YL K I++ D+KP
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 125 SNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
SNIL++ G KLCDFG++ +L D+ + + GT YM+PE +G +S SD
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDS-------MANSFVGTRSYMSPERL-QGTHYSVQSD 185
Query: 185 LWGLGCVLYECYAGRPP 201
+W +G L E GR P
Sbjct: 186 IWSMGLSLVEMAVGRYP 202
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 9/205 (4%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKK--TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLR 60
Q + + IG G + TVYKG+ ++ + + Q EV +L H N+L
Sbjct: 13 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 72
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
F Y T L +V ++C G L L + + + D+A+ R + YLH+K II+
Sbjct: 73 FMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 131
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL--FEEGG 177
DLK +NI L E+ K+ DFGLA + S+ S + G+ +MAPE+ ++
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 178 VHSYASDLWGLGCVLYECYAGRPPF 202
+S+ SD++ G VLYE G+ P+
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 17/256 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHP 56
+ Y ++E +G+G +S V + KK + +A K ++ + S K+ +E R+ L HP
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
N++R + +LV + GG+L + E ++ ++ ++H
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD 150
Query: 117 IIYCDLKPSNILLD---ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
I++ DLKP N+LL + KL DFGLA ++ +A GTP Y++PE+
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGF-----AGTPGYLSPEVL 205
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE---FTQLVKSILXXXXXXXXXXXXXXF 230
+ + D+W G +LY G PPF + Q +K+
Sbjct: 206 RKDP-YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEA 264
Query: 231 ANLINSLLVKDPAQRL 246
NLIN +L +PA+R+
Sbjct: 265 KNLINQMLTINPAKRI 280
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M +YH E IG G Y VYK + E FA+K + D+ S ++E+ +L L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYG-ETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHS 114
N+++ Y T L LV E+ + DL LL + L + + L+ + Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEH-LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+ +++ DLKP N+L++ G K+ DFGLAR + + + T Y AP++
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH-----EVVTLWYRAPDVLM 173
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S D+W +GC+ E G P F G E QL++
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMR 212
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M +YH E IG G Y VYK + E FA+K + D+ S ++E+ +L L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYG-ETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHS 114
N+++ Y T L LV E+ + DL LL + L + + L+ + Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEH-LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+ +++ DLKP N+L++ G K+ DFGLAR + + + T Y AP++
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH-----EVVTLWYRAPDVLM 173
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S D+W +GC+ E G P F G E QL++
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMR 212
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
M +YH E IG G Y VYK + E FA+K + D+ S ++E+ +L L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYG-ETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHS 114
N+++ Y T L LV E+ + DL LL + L + + L+ + Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEH-LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+ +++ DLKP N+L++ G K+ DFGLAR + + + T Y AP++
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH-----EIVTLWYRAPDVLM 173
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
+S D+W +GC+ E G P F G E QL++
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMR 212
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 112/215 (52%), Gaps = 26/215 (12%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK----VLQEVRMLHSLDHPNVLRFYS 63
+ +G+G + V++GR KKT + FAIK + + ++E +L L+H N+++ ++
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 64 WYE--TSAHLWLVLEYCVGGDLMSLLRQDNQ---LPEDSIRDLAQDLVRALQYLHSKGII 118
E T+ H L++E+C G L ++L + + LPE + +D+V + +L GI+
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 119 YCDLKPSNIL--LDENGRT--KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+ ++KP NI+ + E+G++ KL DFG AR+L D + S GT Y+ P+++E
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY------GTEEYLHPDMYE 188
Query: 175 EGGV-------HSYASDLWGLGCVLYECYAGRPPF 202
+ + DLW +G Y G PF
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 19/204 (9%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDK--SQKSKVLQEVRMLHS-LDHPNVLRFYSWYE 66
+G+G Y VY GR AIK + + S+ S+ L E LH L H N++++ +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 67 TSAHLWLVLEYCVGGDLMSLLR------QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
+ + + +E GG L +LLR +DN E +I + ++ L+YLH I++
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDN---EQTIGFYTKQILEGLKYLHDNQIVHR 146
Query: 121 DLKPSNILLDE-NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG-V 178
D+K N+L++ +G K+ DFG +++L+ + + GT YMAPE+ ++G
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF-----TGTLQYMAPEIIDKGPRG 201
Query: 179 HSYASDLWGLGCVLYECYAGRPPF 202
+ A+D+W LGC + E G+PPF
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 19/204 (9%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDK--SQKSKVLQEVRMLHS-LDHPNVLRFYSWYE 66
+G+G Y VY GR AIK + + S+ S+ L E LH L H N++++ +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 67 TSAHLWLVLEYCVGGDLMSLLR------QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
+ + + +E GG L +LLR +DN E +I + ++ L+YLH I++
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDN---EQTIGFYTKQILEGLKYLHDNQIVHR 132
Query: 121 DLKPSNILLDE-NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG-V 178
D+K N+L++ +G K+ DFG +++L+ + + GT YMAPE+ ++G
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF-----TGTLQYMAPEIIDKGPRG 187
Query: 179 HSYASDLWGLGCVLYECYAGRPPF 202
+ A+D+W LGC + E G+PPF
Sbjct: 188 YGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKS--QKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
IG G + TVYKG+ + +K VD + Q EV +L H N+L F Y T
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG-YMT 102
Query: 68 SAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSN 126
+L +V ++C G L L Q+ + + D+A+ + + YLH+K II+ D+K +N
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNN 162
Query: 127 ILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL--FEEGGVHSYASD 184
I L E K+ DFGLA + S+ S + G+ +MAPE+ ++ S+ SD
Sbjct: 163 IFLHEGLTVKIGDFGLA---TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSD 219
Query: 185 LWGLGCVLYECYAGRPPF 202
++ G VLYE G P+
Sbjct: 220 VYSYGIVLYELMTGELPY 237
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 156/335 (46%), Gaps = 29/335 (8%)
Query: 4 YHIYEAIGRGKYSTVYK--GRKKK--TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPN-- 57
Y I + IG G S V++ KK+ I+Y ++ D E+ L+ L +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
++R Y + T ++++V+E C DL S L++ + + ++++ A+ +H GI
Sbjct: 71 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 129
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE--- 174
++ DLKP+N L+ +G KL DFG+A ++ + +S++ ++ GT YM PE +
Sbjct: 130 VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT---TSVVKDSQVGTVNYMPPEAIKDMS 185
Query: 175 ---EGG----VHSYASDLWGLGCVLYECYAGRPPF--VGREFTQLVKSILXXXXXXXXXX 225
E G S SD+W LGC+LY G+ PF + + ++L I
Sbjct: 186 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 245
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSLKGAVRQ---- 281
+++ L +DP QR+ +L H + + + P+ + + +K + Q
Sbjct: 246 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGL 305
Query: 282 -DENSMLGSTPVRVTP-SGRKTQTKTSGRVFEEKQ 314
NS+L + SG ++ +S + FE+K+
Sbjct: 306 NSPNSILKAAKTLYEHYSGGESHNSSSSKTFEKKR 340
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 156/335 (46%), Gaps = 29/335 (8%)
Query: 4 YHIYEAIGRGKYSTVYK--GRKKK--TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPN-- 57
Y I + IG G S V++ KK+ I+Y ++ D E+ L+ L +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
++R Y + T ++++V+E C DL S L++ + + ++++ A+ +H GI
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 176
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE--- 174
++ DLKP+N L+ +G KL DFG+A ++ + +S++ ++ GT YM PE +
Sbjct: 177 VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT---TSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 175 ---EGG----VHSYASDLWGLGCVLYECYAGRPPF--VGREFTQLVKSILXXXXXXXXXX 225
E G S SD+W LGC+LY G+ PF + + ++L I
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 292
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSLKGAVRQ---- 281
+++ L +DP QR+ +L H + + + P+ + + +K + Q
Sbjct: 293 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGL 352
Query: 282 -DENSMLGSTPVRVTP-SGRKTQTKTSGRVFEEKQ 314
NS+L + SG ++ +S + FE+K+
Sbjct: 353 NSPNSILKAAKTLYEHYSGGESHNSSSSKTFEKKR 387
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 17/264 (6%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPNV 58
Y ++E +G+G +S V + K + +A K ++ + S K+ +E R+ L HPN+
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 59 LRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+R + H +L+ + GG+L + E Q ++ A+ + H G++
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVV 143
Query: 119 YCDLKPSNILLD---ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
+ DLKP N+LL + KL DFGLA ++ +A GTP Y++PE+ +
Sbjct: 144 HRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF-----AGTPGYLSPEVLRK 198
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVGRE---FTQLVKSILXXXXXXXXXXXXXXFAN 232
+ DLW G +LY G PPF + Q +K+ +
Sbjct: 199 DP-YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 257
Query: 233 LINSLLVKDPAQRLHWSDLCGHAF 256
LIN +L +P++R+ ++ H +
Sbjct: 258 LINKMLTINPSKRITAAEALKHPW 281
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 17/256 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHP 56
++Y +YE IG+G +S V + K T +A K ++ + S K+ +E R+ L H
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
N++R + +LV + GG+L + E Q ++ A+ + H G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 123
Query: 117 IIYCDLKPSNILLD---ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
+++ DLKP N+LL + KL DFGLA ++ +A GTP Y++PE+
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGF-----AGTPGYLSPEVL 178
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE---FTQLVKSILXXXXXXXXXXXXXXF 230
+ + D+W G +LY G PPF + Q +K+
Sbjct: 179 RKEA-YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 231 ANLINSLLVKDPAQRL 246
NLIN +L +PA+R+
Sbjct: 238 KNLINQMLTINPAKRI 253
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRM-LHSLDHPNVLRFYSW 64
+GRG Y V K R + + A+K +V+ ++ ++L ++ + + ++D P + FY
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 65 YETSAHLWLVLEY---CVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK-GIIYC 120
+W+ +E + ++ + +PED + +A +V+AL++LHSK +I+
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 134
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA-----PELFEE 175
D+KPSN+L++ G+ K+CDFG++ L D + G YMA PEL ++
Sbjct: 135 DVKPSNVLINALGQVKMCDFGISGYLVD------DVAKDIDAGCKPYMAPERINPELNQK 188
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPF--VGREFTQLVKSILXXXXXXXXXXXXXXFANL 233
G +S SD+W LG + E R P+ G F QL + + F +
Sbjct: 189 G--YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDF 246
Query: 234 INSLLVKDPAQRLHWSDLCGHAFW 257
+ L K+ +R + +L H F+
Sbjct: 247 TSQCLKKNSKERPTYPELMQHPFF 270
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 11/209 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKK----TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHP 56
M +Y E +G G Y VYK + + ++ + + D+ S ++E+ +L L HP
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDS-IRDLAQDLVRALQYLHSK 115
N++ + L LV E+ + DL +L ++ +DS I+ L+R + + H
Sbjct: 80 NIVSLIDVIHSERCLTLVFEF-MEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 116 GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
I++ DLKP N+L++ +G KL DFGLAR ++ + + T Y AP++
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH-----EVVTLWYRAPDVLMG 193
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVG 204
+S + D+W +GC+ E G+P F G
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 11/209 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKK----TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHP 56
M +Y E +G G Y VYK + + ++ + + D+ S ++E+ +L L HP
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDS-IRDLAQDLVRALQYLHSK 115
N++ + L LV E+ + DL +L ++ +DS I+ L+R + + H
Sbjct: 80 NIVSLIDVIHSERCLTLVFEF-MEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 116 GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
I++ DLKP N+L++ +G KL DFGLAR ++ + + T Y AP++
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH-----EVVTLWYRAPDVLMG 193
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVG 204
+S + D+W +GC+ E G+P F G
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 16/264 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS---QKSKVLQEVRMLHSLDHPNV 58
+ Y I E +G G + V++ +K T F K ++ K V E+ +++ L HP +
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 59 LRFYSWYETSAHLWLVLEYCVGGDLMS-LLRQDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
+ + +E + L+LE+ GG+L + +D ++ E + + + L+++H I
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI 170
Query: 118 IYCDLKPSNILLD--ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
++ D+KP NI+ + + K+ DFGLA KL+ P ++ + T + APE+ +
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLN-----PDEIV-KVTTATAEFAAPEIVDR 224
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVGR---EFTQLVKSILXXXXXXXXXXXXXXFAN 232
V Y +D+W +G + Y +G PF G E Q VK +
Sbjct: 225 EPVGFY-TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 283
Query: 233 LINSLLVKDPAQRLHWSDLCGHAF 256
I +LL K+P +RL D H +
Sbjct: 284 FIKNLLQKEPRKRLTVHDALEHPW 307
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 112/268 (41%), Gaps = 60/268 (22%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ--------KSKVLQEVRMLHSLD 54
+YH+ AIG+G Y V + +T AIK ++K++ ++ EVR++ L
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVR------- 107
HPN+ R Y YE ++ LV+E C GG L+ L N +DS A D+V+
Sbjct: 87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKL---NVFIDDSTGKCAMDVVKTQICPCP 143
Query: 108 ------------------------------------ALQYLHSKGIIYCDLKPSNILLDE 131
AL YLH++GI + D+KP N L
Sbjct: 144 ECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFST 203
Query: 132 NG--RTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA--SDLWG 187
N KL DFGL+++ + + K GTP ++APE+ SY D W
Sbjct: 204 NKSFEIKLVDFGLSKEFYKLNNGEYYGM-TTKAGTPYFVAPEVLNTTN-ESYGPKCDAWS 261
Query: 188 LGCVLYECYAGRPPFVGREFTQLVKSIL 215
G +L+ G PF G + +L
Sbjct: 262 AGVLLHLLLMGAVPFPGVNDADTISQVL 289
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 155/335 (46%), Gaps = 29/335 (8%)
Query: 4 YHIYEAIGRGKYSTVYK--GRKKK--TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPN-- 57
Y I + IG G S V++ KK+ I+Y ++ D E+ L+ L +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
++R Y + T ++++V+E C DL S L++ + + ++++ A+ +H GI
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 176
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE--- 174
++ DLKP+N L+ +G KL DFG+A ++ + +S++ ++ G YM PE +
Sbjct: 177 VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT---TSVVKDSQVGAVNYMPPEAIKDMS 232
Query: 175 ---EGG----VHSYASDLWGLGCVLYECYAGRPPF--VGREFTQLVKSILXXXXXXXXXX 225
E G S SD+W LGC+LY G+ PF + + ++L I
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 292
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPPQPAFDSLKGAVRQ---- 281
+++ L +DP QR+ +L H + + + P+ + + +K + Q
Sbjct: 293 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGL 352
Query: 282 -DENSMLGSTPVRVTP-SGRKTQTKTSGRVFEEKQ 314
NS+L + SG ++ +S + FE+K+
Sbjct: 353 NSPNSILKAAKTLYEHYSGGESHNSSSSKTFEKKR 387
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK----VLQEVRMLHSLDHPNVLRFYS 63
+ +G+G + V++GR KKT + FAIK + + ++E +L L+H N+++ ++
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 64 WYE--TSAHLWLVLEYCVGGDLMSLLRQDNQ---LPEDSIRDLAQDLVRALQYLHSKGII 118
E T+ H L++E+C G L ++L + + LPE + +D+V + +L GI+
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 119 YCDLKPSNIL--LDENGRT--KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+ ++KP NI+ + E+G++ KL DFG AR+L D + GT Y+ P+++E
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY------GTEEYLHPDMYE 188
Query: 175 EGGV-------HSYASDLWGLGCVLYECYAGRPPF 202
+ + DLW +G Y G PF
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSV---DKSQKSKVLQEVRMLHSLDHPNVLRFYSW 64
E +G+G + K ++T E +K + D+ + L+EV+++ L+HPNVL+F
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 65 YETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
L + EY GG L +++ D+Q P A+D+ + YLHS II+ DL
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLN 135
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAK---------CGTPCYMAPELFE 174
N L+ EN + DFGLAR + D P + K G P +MAPE+
Sbjct: 136 SHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI- 194
Query: 175 EGGVHSYASDLWGLGCVLYE 194
G + D++ G VL E
Sbjct: 195 NGRSYDEKVDVFSFGIVLCE 214
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 20/276 (7%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV---DKSQKSKVLQEVRMLHSLDHPN 57
++ Y I+E +G G + V++ ++ T FA K V +S K V +E++ + L HP
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMS-LLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
++ + +E + ++ E+ GG+L + + N++ ED + + + + L ++H
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 169
Query: 117 IIYCDLKPSNILL--DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
++ DLKP NI+ + KL DFGL L + GT + APE+
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV------KVTTGTAEFAAPEV-A 222
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGR---EFTQLVKSILXXXXXXXXXXXXXXFA 231
EG Y +D+W +G + Y +G PF G E + VKS
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 282
Query: 232 NLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLP 267
+ I LL+ DP R+ H + LTP P
Sbjct: 283 DFIRKLLLADPNTRMTIHQALEHPW----LTPGNAP 314
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 20/276 (7%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV---DKSQKSKVLQEVRMLHSLDHPN 57
++ Y I+E +G G + V++ ++ T FA K V +S K V +E++ + L HP
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMS-LLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
++ + +E + ++ E+ GG+L + + N++ ED + + + + L ++H
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 117 IIYCDLKPSNILL--DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
++ DLKP NI+ + KL DFGL L + GT + APE+
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV------KVTTGTAEFAAPEV-A 328
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGR---EFTQLVKSILXXXXXXXXXXXXXXFA 231
EG Y +D+W +G + Y +G PF G E + VKS
Sbjct: 329 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 388
Query: 232 NLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLP 267
+ I LL+ DP R+ H + LTP P
Sbjct: 389 DFIRKLLLADPNTRMTIHQALEHPW----LTPGNAP 420
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 96.7 bits (239), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 9/205 (4%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKK--TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLR 60
Q + + IG G + TVYKG+ ++ + + Q EV +L H N+L
Sbjct: 29 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 88
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
F Y T L +V ++C G L L + + + D+A+ + + YLH+K II+
Sbjct: 89 FMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 147
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL--FEEGG 177
DLK +NI L E+ K+ DFGLA ++ S+ S + G+ +MAPE+ ++
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLA---TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 178 VHSYASDLWGLGCVLYECYAGRPPF 202
+S+ SD++ G VLYE G+ P+
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 9/205 (4%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKK--TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLR 60
Q + + IG G + TVYKG+ ++ + + Q EV +L H N+L
Sbjct: 37 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
F Y T L +V ++C G L L + + + D+A+ + + YLH+K II+
Sbjct: 97 FMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 155
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL--FEEGG 177
DLK +NI L E+ K+ DFGLA ++ S+ S + G+ +MAPE+ ++
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLA---TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 178 VHSYASDLWGLGCVLYECYAGRPPF 202
+S+ SD++ G VLYE G+ P+
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFA-----IKSVDKSQKSKVLQEVRMLHSLDHPN 57
+Y ++E +G+G +S V + K + +A K + K+ +E R+ L HPN
Sbjct: 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPN 71
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
++R + H +L+ + GG+L + E Q ++ A+ + H G+
Sbjct: 72 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 131
Query: 118 IYCDLKPSNILLD---ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
++ +LKP N+LL + KL DFGLA ++ +A GTP Y++PE+
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF-----AGTPGYLSPEVLR 186
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGRE---FTQLVKSILXXXXXXXXXXXXXXFA 231
+ + DLW G +LY G PPF + Q +K+
Sbjct: 187 KDP-YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 245
Query: 232 NLINSLLVKDPAQRLHWSDLCGHAF 256
+LIN +L +P++R+ ++ H +
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPW 270
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 9/205 (4%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKK--TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLR 60
Q + + IG G + TVYKG+ ++ + + Q EV +L H N+L
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
F Y T L +V ++C G L L + + + D+A+ + + YLH+K II+
Sbjct: 69 FMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL--FEEGG 177
DLK +NI L E+ K+ DFGLA ++ S+ S + G+ +MAPE+ ++
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLA---TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 178 VHSYASDLWGLGCVLYECYAGRPPF 202
+S+ SD++ G VLYE G+ P+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 128/275 (46%), Gaps = 25/275 (9%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ--------KSKVLQEVRMLHSLDH 55
Y + E IG+G +S V + ++T + FA+K VD ++ + +E + H L H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLL--RQDNQL--PEDSIRDLAQDLVRALQY 111
P+++ Y + L++V E+ G DL + R D E + ++ AL+Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 112 LHSKGIIYCDLKPSNILL---DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
H II+ D+KP +LL + + KL FG+A +L + S ++ + GTP +M
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE-----SGLVAGGRVGTPHFM 202
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXXXX 225
APE+ + + D+WG G +L+ +G PF G R F ++K
Sbjct: 203 APEVVKREP-YGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHI 261
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTK 260
+L+ +L+ DPA+R+ + H + + +
Sbjct: 262 SESA-KDLVRRMLMLDPAERITVYEALNHPWLKER 295
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 132/279 (47%), Gaps = 23/279 (8%)
Query: 4 YHIYEAIGRGKYSTVYK--GRKKK--TIEYFAIKSVDKSQKSKVLQEVRMLHSLDH--PN 57
Y I + IG G S V++ KK+ I+Y ++ D E+ L+ L
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
++R Y + T ++++V+E C DL S L++ + + ++++ A+ +H GI
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 176
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE--- 174
++ DLKP+N L+ +G KL DFG+A ++ + +S++ ++ GT YM PE +
Sbjct: 177 VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT---TSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 175 ---EGG----VHSYASDLWGLGCVLYECYAGRPPF--VGREFTQLVKSILXXXXXXXXXX 225
E G S SD+W LGC+LY G+ PF + + ++L I
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 292
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPM 264
+++ L +DP QR+ +L H + + + P+
Sbjct: 293 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 331
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 95.9 bits (237), Expect = 2e-19, Method: Composition-based stats.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 13/213 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV------DKSQKSKVLQEVRMLHSLDH 55
++Y + E +G G S V+ R + A+K + D S + +E + +L+H
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 88
Query: 56 PNVLRFYSWYETSAHL----WLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
P ++ Y E ++V+EY G L ++ + + ++ D +AL +
Sbjct: 89 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 148
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
H GII+ D+KP+NI++ K+ DFG+AR ++D+ + + A GT Y++PE
Sbjct: 149 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT--AAVIGTAQYLSPE 206
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
V + SD++ LGCVLYE G PPF G
Sbjct: 207 QARGDSVDA-RSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 128/275 (46%), Gaps = 25/275 (9%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ--------KSKVLQEVRMLHSLDH 55
Y + E IG+G +S V + ++T + FA+K VD ++ + +E + H L H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLL--RQDNQL--PEDSIRDLAQDLVRALQY 111
P+++ Y + L++V E+ G DL + R D E + ++ AL+Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 112 LHSKGIIYCDLKPSNILL---DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
H II+ D+KP +LL + + KL FG+A +L + S ++ + GTP +M
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE-----SGLVAGGRVGTPHFM 200
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVG---REFTQLVKSILXXXXXXXXXX 225
APE+ + + D+WG G +L+ +G PF G R F ++K
Sbjct: 201 APEVVKREP-YGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHI 259
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTK 260
+L+ +L+ DPA+R+ + H + + +
Sbjct: 260 SESA-KDLVRRMLMLDPAERITVYEALNHPWLKER 293
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 95.5 bits (236), Expect = 2e-19, Method: Composition-based stats.
Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 13/213 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV------DKSQKSKVLQEVRMLHSLDH 55
++Y + E +G G S V+ R + A+K + D S + +E + +L+H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 56 PNVLRFYSWYETSAHL----WLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
P ++ Y+ E ++V+EY G L ++ + + ++ D +AL +
Sbjct: 72 PAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
H GII+ D+KP+NI++ K+ DFG+AR ++D+ + + A GT Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT--AAVIGTAQYLSPE 189
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
V + SD++ LGCVLYE G PPF G
Sbjct: 190 QARGDSVDA-RSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 95.5 bits (236), Expect = 2e-19, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 13/213 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV------DKSQKSKVLQEVRMLHSLDH 55
++Y + E +G G S V+ R + A+K + D S + +E + +L+H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 56 PNVLRFYSWYETSAHL----WLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
P ++ Y E ++V+EY G L ++ + + ++ D +AL +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
H GII+ D+KP+NIL+ K+ DFG+AR ++D+ S A GT Y++PE
Sbjct: 132 SHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGN--SVXQTAAVIGTAQYLSPE 189
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
V + SD++ LGCVLYE G PPF G
Sbjct: 190 QARGDSVDA-RSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 133/312 (42%), Gaps = 53/312 (16%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK-----VLQEVRMLHSLDH 55
+++Y IG+G + V+K R +KT + A+K V + + L+E+++L L H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 56 PNVLRFYSWYETSAH--------LWLVLEYCVGGDLMSLLRQDNQLPE---DSIRDLAQD 104
NV+ T A ++LV ++C DL LL N L + I+ + Q
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLL--SNVLVKFTLSEIKRVMQM 133
Query: 105 LVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGT 164
L+ L Y+H I++ D+K +N+L+ +G KL DFGLAR S A + + + T
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN-RVVT 192
Query: 165 PCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGR------------------- 205
Y PEL + DLWG GC++ E + P G
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 206 -----------EFTQLVKSILXXXXXXXXXXXXXXFA-NLINSLLVKDPAQRLHWSDLCG 253
E +LVK +A +LI+ LLV DPAQR+ D
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
Query: 254 HAFWRTKLTPMP 265
H F+ + PMP
Sbjct: 313 HDFFWS--DPMP 322
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 132/279 (47%), Gaps = 23/279 (8%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKK----TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPN-- 57
Y I + IG G S V++ +K I+Y ++ D E+ L+ L +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 73
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
++R Y + T ++++V+E C DL S L++ + + ++++ A+ +H GI
Sbjct: 74 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 132
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE--- 174
++ DLKP+N L+ +G KL DFG+A ++ + +S++ ++ GT YM PE +
Sbjct: 133 VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT---TSVVKDSQVGTVNYMPPEAIKDMS 188
Query: 175 ---EGG----VHSYASDLWGLGCVLYECYAGRPPF--VGREFTQLVKSILXXXXXXXXXX 225
E G S SD+W LGC+LY G+ PF + + ++L I
Sbjct: 189 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 248
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPM 264
+++ L +DP QR+ +L H + + + P+
Sbjct: 249 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 287
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKX-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 132/279 (47%), Gaps = 23/279 (8%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKK----TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPN-- 57
Y I + IG G S V++ +K I+Y ++ D E+ L+ L +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
++R Y + T ++++V+E C DL S L++ + + ++++ A+ +H GI
Sbjct: 90 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 148
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE--- 174
++ DLKP+N L+ +G KL DFG+A ++ + +S++ ++ GT YM PE +
Sbjct: 149 VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT---TSVVKDSQVGTVNYMPPEAIKDMS 204
Query: 175 ---EGG----VHSYASDLWGLGCVLYECYAGRPPF--VGREFTQLVKSILXXXXXXXXXX 225
E G S SD+W LGC+LY G+ PF + + ++L I
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 264
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPM 264
+++ L +DP QR+ +L H + + + P+
Sbjct: 265 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 303
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQ-EVRMLHSLDHP 56
+Y I + +G G STVY AIK++ +K + K + EV L H
Sbjct: 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQ 71
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
N++ E +LV+EY G L + L D+ + ++ +++ H
Sbjct: 72 NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMR 131
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I++ D+KP NIL+D N K+ DFG+A+ LS+ S ++ + GT Y +PE +G
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHV----LGTVQYFSPEQ-AKG 186
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPFVGR 205
+D++ +G VLYE G PPF G
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGEPPFNGE 215
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKK--TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVL 59
Q + + IG G + TVYKG+ ++ + + Q EV +L H N+L
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGII 118
F Y T+ L +V ++C G L L + + + D+A+ + + YLH+K II
Sbjct: 68 LFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 119 YCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL--FEEG 176
+ DLK +NI L E+ K+ DFGLA + S+ S + G+ +MAPE+ ++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
+S+ SD++ G VLYE G+ P+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 160
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMX--------GXVATRWYRAPE 212
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 256
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 132/279 (47%), Gaps = 23/279 (8%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKK----TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPN-- 57
Y I + IG G S V++ +K I+Y ++ D E+ L+ L +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 69
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
++R Y + T ++++V+E C DL S L++ + + ++++ A+ +H GI
Sbjct: 70 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 128
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE--- 174
++ DLKP+N L+ +G KL DFG+A ++ + +S++ ++ GT YM PE +
Sbjct: 129 VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT---TSVVKDSQVGTVNYMPPEAIKDMS 184
Query: 175 ---EGG----VHSYASDLWGLGCVLYECYAGRPPF--VGREFTQLVKSILXXXXXXXXXX 225
E G S SD+W LGC+LY G+ PF + + ++L I
Sbjct: 185 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 244
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPM 264
+++ L +DP QR+ +L H + + + P+
Sbjct: 245 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 283
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 95.1 bits (235), Expect = 2e-19, Method: Composition-based stats.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 13/213 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV------DKSQKSKVLQEVRMLHSLDH 55
++Y + E +G G S V+ R + A+K + D S + +E + +L+H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 56 PNVLRFYSWYETSAHL----WLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
P ++ Y E ++V+EY G L ++ + + ++ D +AL +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
H GII+ D+KP+NI++ K+ DFG+AR ++D+ + + A GT Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT--AAVIGTAQYLSPE 189
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
V + SD++ LGCVLYE G PPF G
Sbjct: 190 QARGDSVDA-RSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 95.1 bits (235), Expect = 2e-19, Method: Composition-based stats.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 13/213 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV------DKSQKSKVLQEVRMLHSLDH 55
++Y + E +G G S V+ R + A+K + D S + +E + +L+H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 56 PNVLRFYSWYETSAHL----WLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
P ++ Y E ++V+EY G L ++ + + ++ D +AL +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
H GII+ D+KP+NI++ K+ DFG+AR ++D+ + + A GT Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT--AAVIGTAQYLSPE 189
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
V + SD++ LGCVLYE G PPF G
Sbjct: 190 QARGDSVDA-RSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 95.1 bits (235), Expect = 2e-19, Method: Composition-based stats.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 13/213 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV------DKSQKSKVLQEVRMLHSLDH 55
++Y + E +G G S V+ R + A+K + D S + +E + +L+H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 56 PNVLRFYSWYETSAHL----WLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
P ++ Y E ++V+EY G L ++ + + ++ D +AL +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
H GII+ D+KP+NI++ K+ DFG+AR ++D+ + + A GT Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT--AAVIGTAQYLSPE 189
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
V + SD++ LGCVLYE G PPF G
Sbjct: 190 QARGDSVDA-RSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 160
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 212
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 256
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 109/217 (50%), Gaps = 21/217 (9%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPNVLRFYSW 64
+G G Y +V + + A+K + + +S + +E+R+L L H NV+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 65 Y------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ E + ++LV +G DL ++++ L ++ ++ L L+R L+Y+HS GII
Sbjct: 96 FTPATSIEDFSEVYLVTT-LMGADLNNIVK-SQALSDEHVQFLVYQLLRGLKYIHSAGII 153
Query: 119 YCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+ DLKPSN+ ++E+ ++ DFGLAR+ + T Y APE+
Sbjct: 154 HRDLKPSNVAVNEDSELRILDFGLARQADEEMT--------GYVATRWYRAPEIMLNWMH 205
Query: 179 HSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
++ D+W +GC++ E G+ F G ++ +K I+
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM 242
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 146
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT--------GYVATRWYRAPE 198
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKX-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 159
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 211
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 255
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y IG G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 145
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--------GYVATRWYRAPE 197
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 241
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 9/205 (4%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKK--TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLR 60
Q + + IG G + TVYKG+ ++ + + Q EV +L H N+L
Sbjct: 36 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 95
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
F Y T L +V ++C G L L + + + D+A+ + + YLH+K II+
Sbjct: 96 FMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 154
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL--FEEGG 177
DLK +NI L E+ K+ DFGLA + S+ S + G+ +MAPE+ ++
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 178 VHSYASDLWGLGCVLYECYAGRPPF 202
+S+ SD++ G VLYE G+ P+
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 133/312 (42%), Gaps = 53/312 (16%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK-----VLQEVRMLHSLDH 55
+++Y IG+G + V+K R +KT + A+K V + + L+E+++L L H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 56 PNVLRFYSWYETSAH--------LWLVLEYCVGGDLMSLLRQDNQLPE---DSIRDLAQD 104
NV+ T A ++LV ++C DL LL N L + I+ + Q
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLL--SNVLVKFTLSEIKRVMQM 133
Query: 105 LVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGT 164
L+ L Y+H I++ D+K +N+L+ +G KL DFGLAR S A + + + T
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN-RVVT 192
Query: 165 PCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGR------------------- 205
Y PEL + DLWG GC++ E + P G
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 206 -----------EFTQLVKSILXXXXXXXXXXXXXXFA-NLINSLLVKDPAQRLHWSDLCG 253
E +LVK +A +LI+ LLV DPAQR+ D
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
Query: 254 HAFWRTKLTPMP 265
H F+ + PMP
Sbjct: 313 HDFFWS--DPMP 322
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 136/288 (47%), Gaps = 25/288 (8%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDK-------SQKSKVLQEVRMLHSL 53
+ +Y + + +G G Y V + +T+ A+K + K + ++ V +E+++L L
Sbjct: 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL 63
Query: 54 DHPNVLRFYS--WYETSAHLWLVLEYCVGGDLMSLLRQ--DNQLPEDSIRDLAQDLVRAL 109
H NV++ + E +++V+EYCV G + +L + + P L+ L
Sbjct: 64 RHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGL 122
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
+YLHS+GI++ D+KP N+LL G K+ G+A L + + Q G+P +
Sbjct: 123 EYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ---GSPAFQP 179
Query: 170 PELFEEGGVHSYAS---DLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXX 226
PE+ G+ +++ D+W G LY G PF G +L ++I
Sbjct: 180 PEI--ANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENI-GKGSYAIPGDC 236
Query: 227 XXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKL----TPMPLPPQP 270
++L+ +L +PA+R + H+++R K P+P+PP P
Sbjct: 237 GPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPSP 284
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 133/312 (42%), Gaps = 53/312 (16%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK-----VLQEVRMLHSLDH 55
+++Y IG+G + V+K R +KT + A+K V + + L+E+++L L H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 56 PNVLRFYS--------WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPE---DSIRDLAQD 104
NV+ + A ++LV ++C DL LL N L + I+ + Q
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFC-EHDLAGLL--SNVLVKFTLSEIKRVMQM 133
Query: 105 LVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGT 164
L+ L Y+H I++ D+K +N+L+ +G KL DFGLAR S A + + + T
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN-RVVT 192
Query: 165 PCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGR------------------- 205
Y PEL + DLWG GC++ E + P G
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 206 -----------EFTQLVKSILXXXXXXXXXXXXXXFA-NLINSLLVKDPAQRLHWSDLCG 253
E +LVK +A +LI+ LLV DPAQR+ D
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
Query: 254 HAFWRTKLTPMP 265
H F+ + PMP
Sbjct: 313 HDFFWS--DPMP 322
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 127/267 (47%), Gaps = 15/267 (5%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVL--QEVRMLHSLDHPNVLR 60
+Y I E +GRG++ V++ + + + + K V +VL +E+ +L+ H N+L
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILH 65
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLRQDN-QLPEDSIRDLAQDLVRALQYLHSKGIIY 119
+ +E+ L ++ E+ G D+ + +L E I + ALQ+LHS I +
Sbjct: 66 LHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGH 125
Query: 120 CDLKPSNILLD--ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
D++P NI+ + K+ +FG AR+L +L A P Y APE+ +
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF--RLLFTA----PEYYAPEVHQHDV 179
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXX---XXXXXXXXXFANLI 234
V S A+D+W LG ++Y +G PF+ Q++++I+ + +
Sbjct: 180 V-STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFV 238
Query: 235 NSLLVKDPAQRLHWSDLCGHAFWRTKL 261
+ LLVK+ R+ S+ H + + K+
Sbjct: 239 DRLLVKERKSRMTASEALQHPWLKQKI 265
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 142
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT--------GYVATRWYRAPE 194
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKK--TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVL 59
Q + + IG G + TVYKG+ ++ + + Q EV +L H N+L
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGII 118
F Y T L +V ++C G L L + + + D+A+ + + YLH+K II
Sbjct: 68 LFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 119 YCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL--FEEG 176
+ DLK +NI L E+ K+ DFGLA + S+ S + G+ +MAPE+ ++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
+S+ SD++ G VLYE G+ P+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 9/205 (4%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKK--TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLR 60
Q + + IG G + TVYKG+ ++ + + Q EV +L H N+L
Sbjct: 37 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
F Y T L +V ++C G L L + + + D+A+ + + YLH+K II+
Sbjct: 97 FMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 155
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL--FEEGG 177
DLK +NI L E+ K+ DFGLA + S+ S + G+ +MAPE+ ++
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 178 VHSYASDLWGLGCVLYECYAGRPPF 202
+S+ SD++ G VLYE G+ P+
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 92
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 93 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 150
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 151 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 202
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 246
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKK--TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVL 59
Q + + IG G + TVYKG+ ++ + + Q EV +L H N+L
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGII 118
F Y T L +V ++C G L L + + + D+A+ + + YLH+K II
Sbjct: 73 LFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 131
Query: 119 YCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL--FEEG 176
+ DLK +NI L E+ K+ DFGLA + S+ S + G+ +MAPE+ ++
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
+S+ SD++ G VLYE G+ P+
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 9/205 (4%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKK--TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLR 60
Q + + IG G + TVYKG+ ++ + + Q EV +L H N+L
Sbjct: 11 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 70
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGIIY 119
F Y T L +V ++C G L L + + + D+A+ + + YLH+K II+
Sbjct: 71 FMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 129
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL--FEEGG 177
DLK +NI L E+ K+ DFGLA + S+ S + G+ +MAPE+ ++
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 178 VHSYASDLWGLGCVLYECYAGRPPF 202
+S+ SD++ G VLYE G+ P+
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + K +S + +E+R+L + H N
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 152
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 204
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 248
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKK--TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVL 59
Q + + IG G + TVYKG+ ++ + + Q EV +L H N+L
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGII 118
F Y T L +V ++C G L L + + + D+A+ + + YLH+K II
Sbjct: 73 LFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 131
Query: 119 YCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL--FEEG 176
+ DLK +NI L E+ K+ DFGLA + S+ S + G+ +MAPE+ ++
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPF 202
+S+ SD++ G VLYE G+ P+
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYS 63
Y + IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRY 92
Query: 64 WYETSA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
++ +S +L LVL+Y V R LP ++ L R+L Y+HS
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 115 KGIIYCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
GI + D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 153 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY------YRAPELI 206
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQPIFPG 237
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 113/228 (49%), Gaps = 26/228 (11%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-DKSQKS----KVLQEVRMLHSLD- 54
+ +Y + + +G+G Y V+K ++T E A+K + D Q S + +E+ +L L
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 55 HPNVLRFYSWY--ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
H N++ + + ++LV +Y + DL +++R N L + + L++ ++YL
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDY-METDLHAVIRA-NILEPVHKQYVVYQLIKVIKYL 125
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSM---------------- 156
HS G+++ D+KPSNILL+ K+ DFGL+R + + +++
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 157 LPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
+ T Y APE+ ++ D+W LGC+L E G+P F G
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R ++ +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRYFFYS 84
Query: 68 SA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
S +L LVL+Y V R LP ++ L R+L Y+HS GI
Sbjct: 85 SGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY------YRAPELIFGAT 198
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYS 63
Y + IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRY 114
Query: 64 WYETSA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
++ +S +L LVL+Y V R LP ++ L R+L Y+HS
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 115 KGIIYCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
GI + D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY------YRAPELI 228
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQPIFPG 259
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R ++ +
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRYFFYS 85
Query: 68 SA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
S +L LVL+Y V R LP ++ L R+L Y+HS GI
Sbjct: 86 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 145
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 146 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY------YRAPELIFGAT 199
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 200 DYTSSIDVWSAGCVLAELLLGQPIFPG 226
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R ++ +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRYFFYS 84
Query: 68 SA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
S +L LVL+Y V R LP ++ L R+L Y+HS GI
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY------YRAPELIFGAT 198
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R ++ +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRYFFYS 84
Query: 68 SA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
S +L LVL+Y V R LP ++ L R+L Y+HS GI
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY------YRAPELIFGAT 198
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 146
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 198
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS----KVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + + + L+E+++L H N++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E ++LV + +G DL LL+ L D I ++R L+Y+HS +++
Sbjct: 111 RAPTIEQMKDVYLV-THLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 168
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 169 DLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 226
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 227 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 133/312 (42%), Gaps = 53/312 (16%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK-----VLQEVRMLHSLDH 55
+++Y IG+G + V+K R +KT + A+K V + + L+E+++L L H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 56 PNVLRFYSWYETSAH--------LWLVLEYCVGGDLMSLLRQDNQLPE---DSIRDLAQD 104
NV+ T A ++LV ++C DL LL N L + I+ + Q
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLL--SNVLVKFTLSEIKRVMQM 132
Query: 105 LVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGT 164
L+ L Y+H I++ D+K +N+L+ +G KL DFGLAR S A + + + T
Sbjct: 133 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN-RVVT 191
Query: 165 PCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGR------------------- 205
Y PEL + DLWG GC++ E + P G
Sbjct: 192 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251
Query: 206 -----------EFTQLVKSILXXXXXXXXXXXXXXFA-NLINSLLVKDPAQRLHWSDLCG 253
E +LVK +A +LI+ LLV DPAQR+ D
Sbjct: 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311
Query: 254 HAFWRTKLTPMP 265
H F+ + PMP
Sbjct: 312 HDFFWS--DPMP 321
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 136
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 188
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYS 63
Y + IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRY 92
Query: 64 WYETSA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
++ +S +L LVL+Y V R LP ++ L R+L Y+HS
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 115 KGIIYCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
GI + D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 153 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY------YRAPELI 206
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQPIFPG 237
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA--------GFVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYS 63
Y + IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRY 85
Query: 64 WYETSA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
++ +S +L LVL+Y V R LP ++ L R+L Y+HS
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 145
Query: 115 KGIIYCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
GI + D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 146 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY------YRAPELI 199
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 200 FGATDYTSSIDVWSAGCVLAELLLGQPIFPG 230
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 147
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR +D T Y APE
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT--------GYVATRWYRAPE 199
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 243
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYS 63
Y + IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRY 99
Query: 64 WYETSA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
++ +S +L LVL+Y V R LP ++ L R+L Y+HS
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 159
Query: 115 KGIIYCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
GI + D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 160 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY------YRAPELI 213
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 214 FGATDYTSSIDVWSAGCVLAELLLGQPIFPG 244
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R ++ +
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRYFFYS 88
Query: 68 SA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
S +L LVL+Y V R LP ++ L R+L Y+HS GI
Sbjct: 89 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 148
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 149 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY------YRAPELIFGAT 202
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 203 DYTSSIDVWSAGCVLAELLLGQPIFPG 229
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA--------GFVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYS 63
Y + IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRY 88
Query: 64 WYETSA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
++ +S +L LVL+Y V R LP ++ L R+L Y+HS
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 148
Query: 115 KGIIYCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
GI + D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 149 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY------YRAPELI 202
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 203 FGATDYTSSIDVWSAGCVLAELLLGQPIFPG 233
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 147
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR +D T Y APE
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT--------GYVATRWYRAPE 199
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 243
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 147
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR +D T Y APE
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT--------GYVATRWYRAPE 199
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 243
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 145
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--------GYVATRWYRAPE 197
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 241
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R ++ +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRYFFYS 84
Query: 68 SA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
S +L LVL+Y V R LP ++ L R+L Y+HS GI
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY------YRAPELIFGAT 198
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 136
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA--------GFVATRWYRAPE 188
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 19/208 (9%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ IG G + VY+ + + E AIK V + + K +E++++ LDH N++R ++ +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-RELQIMRKLDHCNIVRLRYFFYS 84
Query: 68 SA------HLWLVLEYCVGGDLMSLLRQDNQ----LPEDSIRDLAQDLVRALQYLHSKGI 117
S +L LVL+Y V + + R ++ LP ++ L R+L Y+HS GI
Sbjct: 85 SGEKKDEVYLNLVLDY-VPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 143
Query: 118 IYCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
+ D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY------YRAPELIFGA 197
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 151
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--------GYVATRWYRAPE 203
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 247
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYS 63
Y + IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRY 108
Query: 64 WYETSA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
++ +S +L LVL+Y V R LP ++ L R+L Y+HS
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 168
Query: 115 KGIIYCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
GI + D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 169 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY------YRAPELI 222
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 223 FGATDYTSSIDVWSAGCVLAELLLGQPIFPG 253
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKS-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGL R D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYS 63
Y + IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRY 114
Query: 64 WYETSA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
++ +S +L LVL+Y V R LP ++ L R+L Y+HS
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 115 KGIIYCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
GI + D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY------YRAPELI 228
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQPIFPG 259
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GXVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYS 63
Y + IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRY 118
Query: 64 WYETSA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
++ +S +L LVL+Y V R LP ++ L R+L Y+HS
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 178
Query: 115 KGIIYCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
GI + D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 179 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY------YRAPELI 232
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 233 FGATDYTSSIDVWSAGCVLAELLLGQPIFPG 263
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R ++ +
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRYFFYS 97
Query: 68 SA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
S +L LVL+Y V R LP ++ L R+L Y+HS GI
Sbjct: 98 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 157
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 158 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY------YRAPELIFGAT 211
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 212 DYTSSIDVWSAGCVLAELLLGQPIFPG 238
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYS 63
Y + IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRY 116
Query: 64 WYETSA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
++ +S +L LVL+Y V R LP ++ L R+L Y+HS
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 176
Query: 115 KGIIYCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
GI + D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 177 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY------YRAPELI 230
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 231 FGATDYTSSIDVWSAGCVLAELLLGQPIFPG 261
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYS 63
Y + IG G + VY+ + + E AIK V + ++ K +E++++ LDH N++R
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-RELQIMRKLDHCNIVRLRY 159
Query: 64 WYETSA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHS 114
++ +S +L LVL+Y V R LP ++ L R+L Y+HS
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 219
Query: 115 KGIIYCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
GI + D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 220 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY------YRAPELI 273
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 274 FGATDYTSSIDVWSAGCVLAELLLGQPIFPG 304
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-AKLTDDHVQFLIYQILRGLKY 136
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 188
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 147
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 199
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 243
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 163
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMX--------GYVATRWYRAPE 215
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 259
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 145
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 197
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 241
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 142
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 194
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 81
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 82 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 139
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 140 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 191
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 192 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 235
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 163
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 215
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 259
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 159
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 211
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 255
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 21/223 (9%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVL-----QEVRMLHSLDHPNV 58
Y + +G G Y V +T AIK + + +S++ +E+R+L + H NV
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 59 LRFYSWYETSAHL------WLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYL 112
+ + L +LV+ + +G DL L++ + +L ED I+ L +++ L+Y+
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPF-MGTDLGKLMKHE-KLGEDRIQFLVYQMLKGLRYI 144
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL 172
H+ GII+ DLKP N+ ++E+ K+ DFGLAR +A S M T Y APE+
Sbjct: 145 HAAGIIHRDLKPGNLAVNEDCELKILDFGLAR------QADSEM--XGXVVTRWYRAPEV 196
Query: 173 FEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
++ D+W +GC++ E G+ F G + +K I+
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM 239
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 146
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 198
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 160
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 212
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 256
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 152
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 204
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 248
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 142
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 194
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 152
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 204
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 248
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 145
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 197
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 241
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 109/217 (50%), Gaps = 21/217 (9%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPNVLRFYSW 64
+G G Y +V + + A+K + + +S + +E+R+L L H NV+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 65 Y------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ E + ++LV +G DL ++++ L ++ ++ L L+R L+Y+HS GII
Sbjct: 96 FTPATSIEDFSEVYLVTT-LMGADLNNIVKC-QALSDEHVQFLVYQLLRGLKYIHSAGII 153
Query: 119 YCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+ DLKPSN+ ++E+ ++ DFGLAR+ + T Y APE+
Sbjct: 154 HRDLKPSNVAVNEDSELRILDFGLARQADEEMT--------GYVATRWYRAPEIMLNWMH 205
Query: 179 HSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
++ D+W +GC++ E G+ F G ++ +K I+
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM 242
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 137
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 189
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 233
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVL 59
+ + E +G G + V + + T E AIK + + + E++++ L+HPNV+
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 60 RFYSWYETSAHL------WLVLEYCVGGDLMSLLRQDNQ---LPEDSIRDLAQDLVRALQ 110
+ L L +EYC GGDL L Q L E IR L D+ AL+
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 111 YLHSKGIIYCDLKPSNILLDENGRT---KLCDFGLARKLSDASKAPSSMLPQAKCGTPCY 167
YLH II+ DLKP NI+L + K+ D G A++L L GT Y
Sbjct: 137 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE------LCTEFVGTLQY 190
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFV 203
+APEL E+ ++ D W G + +EC G PF+
Sbjct: 191 LAPELLEQKK-YTVTVDYWSFGTLAFECITGFRPFL 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 80
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 81 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 138
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 139 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 190
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 234
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 151
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 203
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 247
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 142
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 194
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 137
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 189
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 233
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 136
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 188
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVL 59
+ + E +G G + V + + T E AIK + + + E++++ L+HPNV+
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 60 RFYSWYETSAHL------WLVLEYCVGGDLMSLLRQDNQ---LPEDSIRDLAQDLVRALQ 110
+ L L +EYC GGDL L Q L E IR L D+ AL+
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 111 YLHSKGIIYCDLKPSNILLDENGRT---KLCDFGLARKLSDASKAPSSMLPQAKCGTPCY 167
YLH II+ DLKP NI+L + K+ D G A++L L GT Y
Sbjct: 136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE------LCTEFVGTLQY 189
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFV 203
+APEL E+ ++ D W G + +EC G PF+
Sbjct: 190 LAPELLEQKK-YTVTVDYWSFGTLAFECITGFRPFL 224
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 146
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 198
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ IG G + VY+ + + E AIK V + + K +E++++ LDH N++R ++ +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-RELQIMRKLDHCNIVRLRYFFYS 84
Query: 68 SA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
S +L LVL+Y V R LP ++ L R+L Y+HS GI
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY------YRAPELIFGAT 198
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 13/222 (5%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNV 58
+Y + IG G Y V AIK + ++ + L+E+++L H NV
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 59 LRF-----YSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLH 113
+ S E +++V + + DL LL+ QL D I ++R L+Y+H
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQD-LMETDLYKLLKS-QQLSNDHICYFLYQILRGLKYIH 161
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
S +++ DLKPSN+L++ K+CDFGLAR ++D + L + T Y APE+
Sbjct: 162 SANVLHRDLKPSNLLINTTCDLKICDFGLAR-IADPEHDHTGFLTEX-VATRWYRAPEIM 219
Query: 174 EEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
++ + D+W +GC+L E + RP F G+ + + IL
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ IG G + VY+ + + E AIK V + + K +E++++ LDH N++R ++ +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-RELQIMRKLDHCNIVRLRYFFYS 84
Query: 68 SA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
S +L LVL+Y V R LP ++ L R+L Y+HS GI
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+LLD + KLCDFG A++L S + + Y APEL
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY------YRAPELIFGAT 198
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFVG 204
++ + D+W GCVL E G+P F G
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 14/218 (6%)
Query: 5 HIYEAIGRGKYSTVYKGRKKKT---IEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRF 61
+I E IG G + TV++ + ++ + + ++ L+EV ++ L HPN++ F
Sbjct: 40 NIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 62 YSWYETSAHLWLVLEYCVGGDLMSLLRQDN---QLPEDSIRDLAQDLVRALQYLHSKG-- 116
+L +V EY G L LL + QL E +A D+ + + YLH++
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I++ DLK N+L+D+ K+CDFGL+R KA + + GTP +MAPE+ +
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSR-----LKASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSI 214
+ SD++ G +L+E + P+ Q+V ++
Sbjct: 215 PSNE-KSDVYSFGVILWELATLQQPWGNLNPAQVVAAV 251
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 126/262 (48%), Gaps = 23/262 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRM-LHSLDHPNVLRFYSW 64
+G G V+K R +KT A+K S +K + ++L ++ + L S D P +++ +
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 65 YETSAHLWLVLEYCVGGDLMSLLRQDNQ--LPEDSIRDLAQDLVRALQYLHSK-GIIYCD 121
+ T+ +++ +E + G L++ Q +PE + + +V+AL YL K G+I+ D
Sbjct: 93 FITNTDVFIAME--LMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRD 150
Query: 122 LKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV--- 178
+KPSNILLDE G+ KLCDFG++ +L D S G YMAPE +
Sbjct: 151 VKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS------AGCAAYMAPERIDPPDPTKP 204
Query: 179 -HSYASDLWGLGCVLYECYAGRPPF--VGREFTQLVKSILXX-XXXXXXXXXXXXFANLI 234
+ +D+W LG L E G+ P+ +F L K + F + +
Sbjct: 205 DYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFV 264
Query: 235 NSLLVKDPAQRLHWSDLCGHAF 256
L KD +R ++ L H+F
Sbjct: 265 KDCLTKDHRKRPKYNKLLEHSF 286
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 109/217 (50%), Gaps = 21/217 (9%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPNVLRFYSW 64
+G G Y +V + + A+K + + +S + +E+R+L L H NV+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 65 Y------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ E + ++LV +G DL ++++ L ++ ++ L L+R L+Y+HS GII
Sbjct: 88 FTPATSIEDFSEVYLVTT-LMGADLNNIVKC-QALSDEHVQFLVYQLLRGLKYIHSAGII 145
Query: 119 YCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+ DLKPSN+ ++E+ ++ DFGLAR+ + T Y APE+
Sbjct: 146 HRDLKPSNVAVNEDCELRILDFGLARQADEEMT--------GYVATRWYRAPEIMLNWMH 197
Query: 179 HSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
++ D+W +GC++ E G+ F G ++ +K I+
Sbjct: 198 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM 234
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ D+GLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 23/279 (8%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKK----TIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPN-- 57
Y I + IG G S V++ +K I+Y ++ D E+ L+ L +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
++R Y + T ++++V+E C DL S L++ + + ++++ A+ +H GI
Sbjct: 90 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 148
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE--- 174
++ DLKP+N L+ +G KL DFG+A ++ ++ ++ GT YM PE +
Sbjct: 149 VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDX---XXVVKDSQVGTVNYMPPEAIKDMS 204
Query: 175 ---EGG----VHSYASDLWGLGCVLYECYAGRPPF--VGREFTQLVKSILXXXXXXXXXX 225
E G S SD+W LGC+LY G+ PF + + ++L I
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 264
Query: 226 XXXXFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPM 264
+++ L +DP QR+ +L H + + + P+
Sbjct: 265 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 303
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 5 HIYEAIGRGKYSTVYKGRKKKT---IEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRF 61
+I E IG G + TV++ + ++ + + ++ L+EV ++ L HPN++ F
Sbjct: 40 NIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 62 YSWYETSAHLWLVLEYCVGGDLMSLLRQDN---QLPEDSIRDLAQDLVRALQYLHSKG-- 116
+L +V EY G L LL + QL E +A D+ + + YLH++
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEG 176
I++ +LK N+L+D+ K+CDFGL+R KA + + ++ GTP +MAPE+ +
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSR-----LKASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 177 GVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSI 214
+ SD++ G +L+E + P+ Q+V ++
Sbjct: 215 PSNE-KSDVYSFGVILWELATLQQPWGNLNPAQVVAAV 251
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 12/213 (5%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGR--KKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNV 58
Q I E IG+G++ VY GR + I I+ ++ Q +EV H NV
Sbjct: 32 FEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENV 91
Query: 59 LRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDN-QLPEDSIRDLAQDLVRALQYLHSKGI 117
+ F + HL ++ C G L S++R L + R +AQ++V+ + YLH+KGI
Sbjct: 92 VLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGI 151
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF---- 173
++ DLK N+ D NG+ + DFGL + + G C++APE+
Sbjct: 152 LHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLS 210
Query: 174 ----EEGGVHSYASDLWGLGCVLYECYAGRPPF 202
E+ S SD++ LG + YE +A PF
Sbjct: 211 PDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V K+ A+K + + +S + +E+R+L + H N
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 111
Query: 58 VLRFYSWYETSAHL------WLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + + L +LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 112 VIGLLDVFTPATSLEEFNDVYLVT-HLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 169
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DFGLAR D T Y APE
Sbjct: 170 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------GYVATRWYRAPE 221
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + ++ I+
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIM 265
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 18/261 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRM-LHSLDHPNVLRFYSW 64
+GRG Y V K R + + A+K +V+ ++ ++L ++ + ++D P + FY
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 65 YETSAHLWLVLEY---CVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK-GIIYC 120
+W+ E + ++ + +PED + +A +V+AL++LHSK +I+
Sbjct: 102 LFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 161
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSD--ASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
D+KPSN+L++ G+ K CDFG++ L D A + P P + PEL ++G
Sbjct: 162 DVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYX---APERINPELNQKG-- 216
Query: 179 HSYASDLWGLGCVLYECYAGRPPF--VGREFTQLVKSILXXXXXXXXXXXXXXFANLINS 236
+S SD+W LG E R P+ G F QL + + F + +
Sbjct: 217 YSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQ 276
Query: 237 LLVKDPAQRLHWSDLCGHAFW 257
L K+ +R + +L H F+
Sbjct: 277 CLKKNSKERPTYPELXQHPFF 297
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 125/260 (48%), Gaps = 25/260 (9%)
Query: 7 YEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLR 60
+ +GRG + V+ + K T + +A K ++K + K + E ++L + ++
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 61 FYSWYETSAHLWLVLEYCVGGDL---MSLLRQDN---QLPEDSIRDLAQDLVRALQYLHS 114
+ET L LV+ GGD+ + + +DN Q P +I AQ +V L++LH
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR-AIFYTAQ-IVSGLEHLHQ 307
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+ IIY DLKP N+LLD++G ++ D GLA +L + GTP +MAPEL
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-----TKGYAGTPGFMAPELL- 361
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGR----EFTQLVKSILXXXXXXXXXXXXXXF 230
G + ++ D + LG LYE A R PF R E +L + +L
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPAS- 420
Query: 231 ANLINSLLVKDPAQRLHWSD 250
+ +LL KDP +RL + D
Sbjct: 421 KDFCEALLQKDPEKRLGFRD 440
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ DF LAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 125/260 (48%), Gaps = 25/260 (9%)
Query: 7 YEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLR 60
+ +GRG + V+ + K T + +A K ++K + K + E ++L + ++
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 61 FYSWYETSAHLWLVLEYCVGGDL---MSLLRQDN---QLPEDSIRDLAQDLVRALQYLHS 114
+ET L LV+ GGD+ + + +DN Q P +I AQ +V L++LH
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR-AIFYTAQ-IVSGLEHLHQ 307
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+ IIY DLKP N+LLD++G ++ D GLA +L + GTP +MAPEL
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-----TKGYAGTPGFMAPELL- 361
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGR----EFTQLVKSILXXXXXXXXXXXXXXF 230
G + ++ D + LG LYE A R PF R E +L + +L
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPAS- 420
Query: 231 ANLINSLLVKDPAQRLHWSD 250
+ +LL KDP +RL + D
Sbjct: 421 KDFCEALLQKDPEKRLGFRD 440
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 125/260 (48%), Gaps = 25/260 (9%)
Query: 7 YEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLR 60
+ +GRG + V+ + K T + +A K ++K + K + E ++L + ++
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 61 FYSWYETSAHLWLVLEYCVGGDL---MSLLRQDN---QLPEDSIRDLAQDLVRALQYLHS 114
+ET L LV+ GGD+ + + +DN Q P +I AQ +V L++LH
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR-AIFYTAQ-IVSGLEHLHQ 307
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+ IIY DLKP N+LLD++G ++ D GLA +L + GTP +MAPEL
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-----TKGYAGTPGFMAPELL- 361
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGR----EFTQLVKSILXXXXXXXXXXXXXXF 230
G + ++ D + LG LYE A R PF R E +L + +L
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPAS- 420
Query: 231 ANLINSLLVKDPAQRLHWSD 250
+ +LL KDP +RL + D
Sbjct: 421 KDFCEALLQKDPEKRLGFRD 440
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ FGLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L + H N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 93 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 150
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 151 DLKPSNLLLNTTSDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 208
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 209 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 125/260 (48%), Gaps = 25/260 (9%)
Query: 7 YEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDHPNVLR 60
+ +GRG + V+ + K T + +A K ++K + K + E ++L + ++
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 61 FYSWYETSAHLWLVLEYCVGGDL---MSLLRQDN---QLPEDSIRDLAQDLVRALQYLHS 114
+ET L LV+ GGD+ + + +DN Q P +I AQ +V L++LH
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR-AIFYTAQ-IVSGLEHLHQ 307
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
+ IIY DLKP N+LLD++G ++ D GLA +L + GTP +MAPEL
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-----TKGYAGTPGFMAPELL- 361
Query: 175 EGGVHSYASDLWGLGCVLYECYAGRPPFVGR----EFTQLVKSILXXXXXXXXXXXXXXF 230
G + ++ D + LG LYE A R PF R E +L + +L
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPAS- 420
Query: 231 ANLINSLLVKDPAQRLHWSD 250
+ +LL KDP +RL + D
Sbjct: 421 KDFCEALLQKDPEKRLGFRD 440
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 109/219 (49%), Gaps = 21/219 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNV 58
M+++ + G+G + TV G++K T AIK V D +++ LQ ++ L L HPN+
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNI 81
Query: 59 LRFYSWYET-------SAHLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRA 108
++ S++ T +L +V+EY + + R+ P I+ L+R+
Sbjct: 82 VQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRS 141
Query: 109 LQYLHSKGIIYC--DLKPSNILLDE-NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTP 165
+ LH + C D+KP N+L++E +G KLCDFG A+KLS PS C
Sbjct: 142 IGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS-----PSEPNVAYICSR- 195
Query: 166 CYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
Y APEL ++ A D+W +GC+ E G P F G
Sbjct: 196 YYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRG 234
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 95 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 153 DLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 210
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ D GLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L + H N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 93 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 150
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 151 DLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 208
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 209 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ D GLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 21/224 (9%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHPN 57
+Y +G G Y +V KT A+K + + +S + +E+R+L + H N
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 58 VLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
V+ + E ++LV + +G DL ++++ +L +D ++ L ++R L+Y
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 140
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+HS II+ DLKPSN+ ++E+ K+ D GLAR D T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMT--------GYVATRWYRAPE 192
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ ++ D+W +GC++ E GR F G + +K IL
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS----KVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + + + L+E+++L H N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 91 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 149 DLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 206
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 121/250 (48%), Gaps = 23/250 (9%)
Query: 6 IYEAIGRGKYSTVYKGRKKKTIEYFAIKSVD-KSQKSKVLQEVRMLHSLDHPNVLRFYSW 64
+ E +GRG + V K + + + AIK ++ +S++ + E+R L ++HPN+++ Y
Sbjct: 13 VEEVVGRGAFGVVCKAKWRA--KDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYG- 69
Query: 65 YETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQ---YLHS---KGII 118
+ LV+EY GG L ++L LP + ++ Q YLHS K +I
Sbjct: 70 -ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 119 YCDLKPSNILLDENGRT-KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ DLKP N+LL G K+CDFG A + + + K G+ +MAPE+F EG
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTACDI-------QTHMTNNK-GSAAWMAPEVF-EGS 179
Query: 178 VHSYASDLWGLGCVLYECYAGRPPF--VGREFTQLVKSILXXXXXXXXXXXXXXFANLIN 235
+S D++ G +L+E R PF +G +++ ++ +L+
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMT 239
Query: 236 SLLVKDPAQR 245
KDP+QR
Sbjct: 240 RCWSKDPSQR 249
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L H N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 91 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 149 DLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 206
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSL-DHPNVLRFYS 63
+G G Y V+K R K+ +A+K +++ L EV + HP +R
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+E L+L E C LPE + +D + AL +LHS+G+++ D+K
Sbjct: 125 AWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVK 184
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYAS 183
P+NI L GR KL DFGL +L A + + G P YMAPEL + G + A+
Sbjct: 185 PANIFLGPRGRCKLGDFGLLVELGTAGAG------EVQEGDPRYMAPELLQ--GSYGTAA 236
Query: 184 DLWGLGCVLYECYAGRP-PFVGREFTQLVKSIL 215
D++ LG + E P G + QL + L
Sbjct: 237 DVFSLGLTILEVACNMELPHGGEGWQQLRQGYL 269
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 95 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 153 DLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 210
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 121/250 (48%), Gaps = 23/250 (9%)
Query: 6 IYEAIGRGKYSTVYKGRKKKTIEYFAIKSVD-KSQKSKVLQEVRMLHSLDHPNVLRFYSW 64
+ E +GRG + V K + + + AIK ++ +S++ + E+R L ++HPN+++ Y
Sbjct: 12 VEEVVGRGAFGVVCKAKWRA--KDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYG- 68
Query: 65 YETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQ---YLHS---KGII 118
+ LV+EY GG L ++L LP + ++ Q YLHS K +I
Sbjct: 69 -ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 119 YCDLKPSNILLDENGRT-KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ DLKP N+LL G K+CDFG A + + + K G+ +MAPE+F EG
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTACDI-------QTHMTNNK-GSAAWMAPEVF-EGS 178
Query: 178 VHSYASDLWGLGCVLYECYAGRPPF--VGREFTQLVKSILXXXXXXXXXXXXXXFANLIN 235
+S D++ G +L+E R PF +G +++ ++ +L+
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMT 238
Query: 236 SLLVKDPAQR 245
KDP+QR
Sbjct: 239 RCWSKDPSQR 248
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L H N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 93 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 150
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 151 DLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 208
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 209 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 95 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 153 DLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEX-VATRWYRAPEIMLNSKGYT 210
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L H N++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 96 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 153
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 154 DLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEX-VATRWYRAPEIMLNSKGYT 211
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 212 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L H N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 91 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 149 DLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 206
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L H N++
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 99 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 156
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 157 DLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 214
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 215 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 249
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L H N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 91 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 149 DLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 206
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L H N++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 111 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 168
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 169 DLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 226
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 227 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L H N++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 89 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 146
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 147 DLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 204
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 205 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 124/266 (46%), Gaps = 20/266 (7%)
Query: 2 NQYHIY-EAIGRGKYSTVYKGRKKKTIEYFAIKSV---DKSQKSKVLQEVRMLHSLDHPN 57
N+++++ + +G G +S V ++A+K + ++ + + +E M +HPN
Sbjct: 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPN 87
Query: 58 VLRF--YSWYETSA--HLWLVLEYCVGGDLMS----LLRQDNQLPEDSIRDLAQDLVRAL 109
+LR Y E A WL+L + G L + L + N L ED I L + R L
Sbjct: 88 ILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGL 147
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARK----LSDASKAPSSMLPQAKCGTP 165
+ +H+KG + DLKP+NILL + G+ L D G + + + +A + A+ T
Sbjct: 148 EAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 166 CYMAPELF--EEGGVHSYASDLWGLGCVLYECYAGRPPF--VGREFTQLVKSILXXXXXX 221
Y APELF + V +D+W LGCVLY G P+ V ++ + ++
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIP 267
Query: 222 XXXXXXXXFANLINSLLVKDPAQRLH 247
L+NS++ DP QR H
Sbjct: 268 QSPRHSSALWQLLNSMMTVDPHQRPH 293
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L H N++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 96 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 153
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 154 DLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 211
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 212 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L H N++
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 97 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 154
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 155 DLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 212
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 213 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 247
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L H N++
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 88 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 145
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 146 DLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 203
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 204 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 238
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 95 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 153 DLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 210
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L H N++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 89 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 146
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 147 DLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 204
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 205 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 22/217 (10%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVL-----QEVRMLHSLDHPNVLRFYSW 64
+G G Y +V K++ E AIK + + +S++ +E+ +L + H NV+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 65 YETSAHLWLVLEYCVGGDLMSLLRQDNQ------LPEDSIRDLAQDLVRALQYLHSKGII 118
+ ++ L ++ + +M ++ D Q E+ I+ L +++ L+Y+HS G++
Sbjct: 110 FTPASSLRNFYDFYL---VMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVV 166
Query: 119 YCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+ DLKP N+ ++E+ K+ DFGLAR +DA T Y APE+
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLARH-ADAEMT-------GYVVTRWYRAPEVILSWMH 218
Query: 179 HSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
++ D+W +GC++ E G+ F G+++ + IL
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 255
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AI+ + ++ + L+E+++L H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 95 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 153 DLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 210
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 22/217 (10%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVL-----QEVRMLHSLDHPNVLRFYSW 64
+G G Y +V K++ E AIK + + +S++ +E+ +L + H NV+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 65 YETSAHLWLVLEYCVGGDLMSLLRQDNQ------LPEDSIRDLAQDLVRALQYLHSKGII 118
+ ++ L ++ + +M ++ D Q E+ I+ L +++ L+Y+HS G++
Sbjct: 92 FTPASSLRNFYDFYL---VMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVV 148
Query: 119 YCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+ DLKP N+ ++E+ K+ DFGLAR +DA T Y APE+
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLARH-ADAEMT-------GYVVTRWYRAPEVILSWMH 200
Query: 179 HSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
++ D+W +GC++ E G+ F G+++ + IL
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 237
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + ++ + L+E+++L H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 95 RAPTIEQMKDVYIVQD-LMETDLYKLLKC-QHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+CDFGLAR ++D + L + T Y APE+ ++
Sbjct: 153 DLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 210
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 105/213 (49%), Gaps = 27/213 (12%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVLRFY- 62
+ +GRG + V++ + K +AIK + + + KV++EV+ L L+HP ++R++
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 63 SWYETSA-----------HLWLVLEYCVGGDLMSLLRQDNQLPEDS---IRDLAQDLVRA 108
+W E + +L++ ++ C +L + + E + + A
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 109 LQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQ-------AK 161
+++LHSKG+++ DLKPSNI + K+ DFGL + + + + P +
Sbjct: 131 VEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQ 190
Query: 162 CGTPCYMAPELFEEGGVHSYASDLWGLGCVLYE 194
GT YM+PE G +S+ D++ LG +L+E
Sbjct: 191 VGTKLYMSPEQI-HGNSYSHKVDIFSLGLILFE 222
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSV------DKSQK-SKVLQEVRMLHSLDHPNVLR 60
E IG G + VY R + A+K+ D SQ V QE ++ L HPN++
Sbjct: 13 EIIGIGGFGKVY--RAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG---I 117
+L LV+E+ GG L +L ++P D + + A + R + YLH + I
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVL-SGKRIPPDILVNWAVQIARGMNYLHDEAIVPI 129
Query: 118 IYCDLKPSNILL---DENGR-----TKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
I+ DLK SNIL+ ENG K+ DFGLAR+ +K + G +MA
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK-------MSAAGAYAWMA 182
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
PE+ + S SD+W G +L+E G PF G
Sbjct: 183 PEVI-RASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 29/279 (10%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ +G G V + K+T E FA+K + K++ E+ S P+++R YE
Sbjct: 74 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYEN 132
Query: 68 ----SAHLWLVLEYCVGGDLMSLL--RQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
L +V+E GG+L S + R D E ++ + + A+QYLHS I + D
Sbjct: 133 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 192
Query: 122 LKPSNILLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+KP N+L N KL DFG A++ + + + C TP Y+APE+ G
Sbjct: 193 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP------CYTPYYVAPEVL---GP 243
Query: 179 HSY--ASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFAN---- 232
Y + D+W LG ++Y G PPF + + ++
Sbjct: 244 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 303
Query: 233 ---LINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
LI +LL +P QR+ ++ H W + T +P P
Sbjct: 304 VKMLIRNLLKTEPTQRMTITEFMNHP-WIMQSTKVPQTP 341
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 29/279 (10%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ +G G V + K+T E FA+K + K++ E+ S P+++R YE
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYEN 126
Query: 68 ----SAHLWLVLEYCVGGDLMSLL--RQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
L +V+E GG+L S + R D E ++ + + A+QYLHS I + D
Sbjct: 127 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 186
Query: 122 LKPSNILLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+KP N+L N KL DFG A++ + + + C TP Y+APE+ G
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP------CYTPYYVAPEVL---GP 237
Query: 179 HSY--ASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFAN---- 232
Y + D+W LG ++Y G PPF + + ++
Sbjct: 238 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 297
Query: 233 ---LINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
LI +LL +P QR+ ++ H W + T +P P
Sbjct: 298 VKMLIRNLLKTEPTQRMTITEFMNHP-WIMQSTKVPQTP 335
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDHP 56
++Y I IG G Y V + K AIK + D ++L+E+ +L+ L+H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 57 NVLRFYSWY-----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
+V++ E L++VLE D L R L E I+ L +L+ ++Y
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKY 171
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSM-------------LP 158
+HS GI++ DLKP+N L++++ K+CDFGLAR + S + P
Sbjct: 172 VHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP 231
Query: 159 QAK---------CGTPCYMAPELFEEGGVHSYASDLWGLGCVLYE 194
K T Y APEL ++ A D+W +GC+ E
Sbjct: 232 HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAE 276
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 10 IGRGKYSTVYKGRKKKTIEY--FAIKSVDKSQKS-KVLQEVRMLHSLDHPNVLRFYSWYE 66
+GRG Y VYK ++K + +A+K ++ + S +E+ +L L HPNV+ +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 67 TSA--HLWLVLEYCVGGDLMSLLR---------QDNQLPEDSIRDLAQDLVRALQYLHSK 115
+ A +WL+ +Y DL +++ + QLP ++ L ++ + YLH+
Sbjct: 89 SHADRKVWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 116 GIIYCDLKPSNILL----DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE 171
+++ DLKP+NIL+ E GR K+ D G AR + K + + P T Y APE
Sbjct: 148 WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVV--TFWYRAPE 205
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE 206
L ++ A D+W +GC+ E P F R+
Sbjct: 206 LLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 29/279 (10%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ +G G V + K+T E FA+K + K++ E+ S P+++R YE
Sbjct: 38 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYEN 96
Query: 68 ----SAHLWLVLEYCVGGDLMSLL--RQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
L +V+E GG+L S + R D E ++ + + A+QYLHS I + D
Sbjct: 97 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 156
Query: 122 LKPSNILLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+KP N+L N KL DFG A++ + + + C TP Y+APE+ G
Sbjct: 157 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP------CYTPYYVAPEVL---GP 207
Query: 179 HSY--ASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFAN---- 232
Y + D+W LG ++Y G PPF + + ++
Sbjct: 208 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 267
Query: 233 ---LINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
LI +LL +P QR+ ++ H W + T +P P
Sbjct: 268 VKMLIRNLLKTEPTQRMTITEFMNHP-WIMQSTKVPQTP 305
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 29/279 (10%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ +G G V + K+T E FA+K + K++ E+ S P+++R YE
Sbjct: 30 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYEN 88
Query: 68 ----SAHLWLVLEYCVGGDLMSLL--RQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
L +V+E GG+L S + R D E ++ + + A+QYLHS I + D
Sbjct: 89 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 148
Query: 122 LKPSNILLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+KP N+L N KL DFG A++ + + + C TP Y+APE+ G
Sbjct: 149 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP------CYTPYYVAPEVL---GP 199
Query: 179 HSY--ASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFAN---- 232
Y + D+W LG ++Y G PPF + + ++
Sbjct: 200 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 259
Query: 233 ---LINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
LI +LL +P QR+ ++ H W + T +P P
Sbjct: 260 VKMLIRNLLKTEPTQRMTITEFMNHP-WIMQSTKVPQTP 297
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 29/279 (10%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ +G G V + K+T E FA+K + K++ E+ S P+++R YE
Sbjct: 28 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYEN 86
Query: 68 ----SAHLWLVLEYCVGGDLMSLL--RQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
L +V+E GG+L S + R D E ++ + + A+QYLHS I + D
Sbjct: 87 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 146
Query: 122 LKPSNILLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+KP N+L N KL DFG A++ + + + C TP Y+APE+ G
Sbjct: 147 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP------CYTPYYVAPEVL---GP 197
Query: 179 HSY--ASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFAN---- 232
Y + D+W LG ++Y G PPF + + ++
Sbjct: 198 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 257
Query: 233 ---LINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
LI +LL +P QR+ ++ H W + T +P P
Sbjct: 258 VKMLIRNLLKTEPTQRMTITEFMNHP-WIMQSTKVPQTP 295
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 29/279 (10%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ +G G V + K+T E FA+K + K++ E+ S P+++R YE
Sbjct: 23 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYEN 81
Query: 68 ----SAHLWLVLEYCVGGDLMSLL--RQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
L +V+E GG+L S + R D E ++ + + A+QYLHS I + D
Sbjct: 82 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 141
Query: 122 LKPSNILLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+KP N+L N KL DFG A++ + + + C TP Y+APE+ G
Sbjct: 142 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP------CYTPYYVAPEVL---GP 192
Query: 179 HSY--ASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFAN---- 232
Y + D+W LG ++Y G PPF + + ++
Sbjct: 193 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 252
Query: 233 ---LINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
LI +LL +P QR+ ++ H W + T +P P
Sbjct: 253 VKMLIRNLLKTEPTQRMTITEFMNHP-WIMQSTKVPQTP 290
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 29/279 (10%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ +G G V + K+T E FA+K + K++ E+ S P+++R YE
Sbjct: 29 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYEN 87
Query: 68 ----SAHLWLVLEYCVGGDLMSLL--RQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
L +V+E GG+L S + R D E ++ + + A+QYLHS I + D
Sbjct: 88 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 147
Query: 122 LKPSNILLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+KP N+L N KL DFG A++ + + + C TP Y+APE+ G
Sbjct: 148 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP------CYTPYYVAPEVL---GP 198
Query: 179 HSY--ASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFAN---- 232
Y + D+W LG ++Y G PPF + + ++
Sbjct: 199 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 258
Query: 233 ---LINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
LI +LL +P QR+ ++ H W + T +P P
Sbjct: 259 VKMLIRNLLKTEPTQRMTITEFMNHP-WIMQSTKVPQTP 296
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 29/279 (10%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ +G G V + K+T E FA+K + K++ E+ S P+++R YE
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYEN 80
Query: 68 ----SAHLWLVLEYCVGGDLMSLL--RQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
L +V+E GG+L S + R D E ++ + + A+QYLHS I + D
Sbjct: 81 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 140
Query: 122 LKPSNILLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+KP N+L N KL DFG A++ + + + C TP Y+APE+ G
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP------CYTPYYVAPEVL---GP 191
Query: 179 HSY--ASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFAN---- 232
Y + D+W LG ++Y G PPF + + ++
Sbjct: 192 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 251
Query: 233 ---LINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
LI +LL +P QR+ ++ H W + T +P P
Sbjct: 252 VKMLIRNLLKTEPTQRMTITEFMNHP-WIMQSTKVPQTP 289
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 29/279 (10%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ +G G V + K+T E FA+K + K++ E+ S P+++R YE
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYEN 82
Query: 68 ----SAHLWLVLEYCVGGDLMSLL--RQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
L +V+E GG+L S + R D E ++ + + A+QYLHS I + D
Sbjct: 83 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 142
Query: 122 LKPSNILLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+KP N+L N KL DFG A++ + + + C TP Y+APE+ G
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP------CYTPYYVAPEVL---GP 193
Query: 179 HSY--ASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFAN---- 232
Y + D+W LG ++Y G PPF + + ++
Sbjct: 194 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 253
Query: 233 ---LINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
LI +LL +P QR+ ++ H W + T +P P
Sbjct: 254 VKMLIRNLLKTEPTQRMTITEFMNHP-WIMQSTKVPQTP 291
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDK---------SQKSKVLQEVRMLHSL 53
+Y + +G+G + TV+ G + AIK + + S EV +L +
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 54 D----HPNVLRFYSWYETSAHLWLVLEYCVGG-DLMSLLRQDNQLPEDSIRDLAQDLVRA 108
HP V+R W+ET LVLE + DL + + L E R +V A
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151
Query: 109 LQYLHSKGIIYCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY 167
+Q+ HS+G+++ D+K NIL+D G KL DFG L D GT Y
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD-------GTRVY 204
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H+ + +W LG +LY+ G PF
Sbjct: 205 SPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF 239
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 29/279 (10%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ +G G V + K+T E FA+K + K++ E+ S P+++R YE
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYEN 82
Query: 68 ----SAHLWLVLEYCVGGDLMSLL--RQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
L +V+E GG+L S + R D E ++ + + A+QYLHS I + D
Sbjct: 83 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 142
Query: 122 LKPSNILLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+KP N+L N KL DFG A++ + + + C TP Y+APE+ G
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP------CYTPYYVAPEVL---GP 193
Query: 179 HSY--ASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFAN---- 232
Y + D+W LG ++Y G PPF + + ++
Sbjct: 194 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 253
Query: 233 ---LINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
LI +LL +P QR+ ++ H W + T +P P
Sbjct: 254 VKMLIRNLLKTEPTQRMTITEFMNHP-WIMQSTKVPQTP 291
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 85.9 bits (211), Expect = 1e-16, Method: Composition-based stats.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 23/263 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAI-----KSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSW 64
IGRG + TVYKG +T A + + KS++ + +E L L HPN++RFY
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 65 YETSAH----LWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG--II 118
+E++ + LV E G L + L++ +R + +++ LQ+LH++ II
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPII 153
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ DLK NI + G K+ D GLA L AS A +A GTP + APE +EE
Sbjct: 154 HRDLKCDNIFITGPTGSVKIGDLGLA-TLKRASFA------KAVIGTPEFXAPEXYEEK- 205
Query: 178 VHSYASDLWGLG-CVLYECYAGRPPFVGREFTQLVKSILX-XXXXXXXXXXXXXFANLIN 235
+ + D++ G C L + P + Q+ + + +I
Sbjct: 206 -YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIE 264
Query: 236 SLLVKDPAQRLHWSDLCGHAFWR 258
+ ++ +R DL HAF++
Sbjct: 265 GCIRQNKDERYSIKDLLNHAFFQ 287
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 29/279 (10%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ +G G V + K+T E FA+K + K++ E+ S P+++R YE
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYEN 80
Query: 68 ----SAHLWLVLEYCVGGDLMSLL--RQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
L +V+E GG+L S + R D E ++ + + A+QYLHS I + D
Sbjct: 81 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 140
Query: 122 LKPSNILLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+KP N+L N KL DFG A++ + + C TP Y+APE+ G
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEP------CYTPYYVAPEVL---GP 191
Query: 179 HSY--ASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFAN---- 232
Y + D+W LG ++Y G PPF + + ++
Sbjct: 192 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 251
Query: 233 ---LINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
LI +LL +P QR+ ++ H W + T +P P
Sbjct: 252 VKMLIRNLLKTEPTQRMTITEFMNHP-WIMQSTKVPQTP 289
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 85.5 bits (210), Expect = 2e-16, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL-DHPNVLR 60
+ Y + +GRGKYS V++ E +K + +K+K+ +E+++L +L PN++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIIT 96
Query: 61 FYSWYE--TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S LV E+ D L + L + IR ++++AL Y HS GI+
Sbjct: 97 LADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIM 153
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D E+ + +L D+GLA + + + + PEL +
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY------NVRVASRYFKGPELLVDYQ 207
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFV-GRE-FTQLVK 212
++ Y+ D+W LGC+L + PF G + + QLV+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 13/215 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS----KVLQEVRMLHSLDHPNVLRFYSWY 65
IG G Y V AIK + + + L+E+++L H N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 66 -----ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
E +++V + + DL LL+ L D I ++R L+Y+HS +++
Sbjct: 91 RAPTIEQMKDVYIVQD-LMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
DLKPSN+LL+ K+ DFGLAR ++D + L + T Y APE+ ++
Sbjct: 149 DLKPSNLLLNTTXDLKIXDFGLAR-VADPDHDHTGFLTEY-VATRWYRAPEIMLNSKGYT 206
Query: 181 YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
+ D+W +GC+L E + RP F G+ + + IL
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 84.3 bits (207), Expect = 4e-16, Method: Composition-based stats.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 28/220 (12%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK-----SKVLQEVRMLHSLDHP 56
+ Y I IGRG Y VY K T + AIK V++ + ++L+E+ +L+ L
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 57 NVLRFYSWYETSA-----HLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
++R Y L++VLE DL L + L E+ I+ + +L+ +
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLS-----------DASKAPSSMLPQA 160
+H GII+ DLKP+N LL+++ K+CDFGLAR ++ + ++ P
Sbjct: 145 IHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 161 K------CGTPCYMAPELFEEGGVHSYASDLWGLGCVLYE 194
K T Y APEL ++ + D+W GC+ E
Sbjct: 205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAE 244
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 31/223 (13%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS-----KVLQEVRMLHSLDHP 56
+ Y I IGRG Y VY K + AIK V++ + ++L+E+ +L+ L
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 57 NVLRFYSWYETSA-----HLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
++R + L++VLE DL L + L E ++ + +L+ ++
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 112 LHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKL---------SDASKAPSSMLP---- 158
+H GII+ DLKP+N LL+++ K+CDFGLAR + +D + + P
Sbjct: 147 IHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHN 206
Query: 159 -------QAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYE 194
+ T Y APEL ++ + D+W GC+ E
Sbjct: 207 KNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAE 249
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ +++ L A + A++YL K I+ DL
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 141
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D AP+ K P +A F S SD
Sbjct: 142 NCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKF------SIKSD 195
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 196 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 224
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 23/220 (10%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWY 65
+ IG G + V++ + ++ E AIK V DK K++ LQ +R++ HPNV+ +++
Sbjct: 46 KVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQIMRIV---KHPNVVDLKAFF 101
Query: 66 ETSA------HLWLVLEYC---VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
++ L LVLEY V + +P I+ L+R+L Y+HS G
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG 161
Query: 117 IIYCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEE 175
I + D+KP N+LLD +G KL DFG A+ L S + C Y APEL
Sbjct: 162 ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXI-----CSR-YYRAPELIFG 215
Query: 176 GGVHSYASDLWGLGCVLYECYAGRPPFVGRE-FTQLVKSI 214
++ D+W GCV+ E G+P F G QLV+ I
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEII 255
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ +++ L A + A++YL K I+ DL
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 142
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D AP+ K P +A F S SD
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKF------SIKSD 196
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 225
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 114/254 (44%), Gaps = 19/254 (7%)
Query: 9 AIGRGKYSTVYKG---RKKKTIEYFAIKSVDK----SQKSKVLQEVRMLHSLDHPNVLRF 61
IG G++ V++G + AIK+ S + K LQE + DHP++++
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 62 YSWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
T +W+++E C G+L S L+ + L S+ A L AL YL SK ++
Sbjct: 77 IG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDAS--KAPSSMLPQAKCGTPCYMAPELFEEGGV 178
D+ N+L+ N KL DFGL+R + D++ KA LP +MAPE
Sbjct: 136 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK------WMAPESINFRRF 189
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSL 237
S ASD+W G ++E G PF G + ++ I +L+
Sbjct: 190 TS-ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKC 248
Query: 238 LVKDPAQRLHWSDL 251
DP++R +++L
Sbjct: 249 WAYDPSRRPRFTEL 262
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 114/254 (44%), Gaps = 19/254 (7%)
Query: 9 AIGRGKYSTVYKG---RKKKTIEYFAIKS----VDKSQKSKVLQEVRMLHSLDHPNVLRF 61
IG G++ V++G + AIK+ S + K LQE + DHP++++
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 62 YSWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
T +W+++E C G+L S L+ + L S+ A L AL YL SK ++
Sbjct: 105 IG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 163
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDAS--KAPSSMLPQAKCGTPCYMAPELFEEGGV 178
D+ N+L+ N KL DFGL+R + D++ KA LP +MAPE
Sbjct: 164 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESINFRRF 217
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSL 237
S ASD+W G ++E G PF G + ++ I +L+
Sbjct: 218 TS-ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKC 276
Query: 238 LVKDPAQRLHWSDL 251
DP++R +++L
Sbjct: 277 WAYDPSRRPRFTEL 290
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 114/254 (44%), Gaps = 19/254 (7%)
Query: 9 AIGRGKYSTVYKG---RKKKTIEYFAIKS----VDKSQKSKVLQEVRMLHSLDHPNVLRF 61
IG G++ V++G + AIK+ S + K LQE + DHP++++
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 62 YSWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
T +W+++E C G+L S L+ + L S+ A L AL YL SK ++
Sbjct: 77 IG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDAS--KAPSSMLPQAKCGTPCYMAPELFEEGGV 178
D+ N+L+ N KL DFGL+R + D++ KA LP +MAPE
Sbjct: 136 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESINFRRF 189
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSL 237
S ASD+W G ++E G PF G + ++ I +L+
Sbjct: 190 TS-ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKC 248
Query: 238 LVKDPAQRLHWSDL 251
DP++R +++L
Sbjct: 249 WAYDPSRRPRFTEL 262
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 114/254 (44%), Gaps = 19/254 (7%)
Query: 9 AIGRGKYSTVYKG---RKKKTIEYFAIKS----VDKSQKSKVLQEVRMLHSLDHPNVLRF 61
IG G++ V++G + AIK+ S + K LQE + DHP++++
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 62 YSWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
T +W+++E C G+L S L+ + L S+ A L AL YL SK ++
Sbjct: 82 IG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 140
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDAS--KAPSSMLPQAKCGTPCYMAPELFEEGGV 178
D+ N+L+ N KL DFGL+R + D++ KA LP +MAPE
Sbjct: 141 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESINFRRF 194
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSL 237
S ASD+W G ++E G PF G + ++ I +L+
Sbjct: 195 TS-ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKC 253
Query: 238 LVKDPAQRLHWSDL 251
DP++R +++L
Sbjct: 254 WAYDPSRRPRFTEL 267
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 19/253 (7%)
Query: 10 IGRGKYSTVYKG---RKKKTIEYFAIKS----VDKSQKSKVLQEVRMLHSLDHPNVLRFY 62
IG G++ V++G + AIK+ S + K LQE + DHP++++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
T +W+++E C G+L S L+ + L S+ A L AL YL SK ++ D
Sbjct: 458 GVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRD 516
Query: 122 LKPSNILLDENGRTKLCDFGLARKLSDAS--KAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
+ N+L+ N KL DFGL+R + D++ KA LP +MAPE
Sbjct: 517 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESINFRRFT 570
Query: 180 SYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLL 238
S ASD+W G ++E G PF G + ++ I +L+
Sbjct: 571 S-ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCW 629
Query: 239 VKDPAQRLHWSDL 251
DP++R +++L
Sbjct: 630 AYDPSRRPRFTEL 642
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 114/254 (44%), Gaps = 19/254 (7%)
Query: 9 AIGRGKYSTVYKG---RKKKTIEYFAIKS----VDKSQKSKVLQEVRMLHSLDHPNVLRF 61
IG G++ V++G + AIK+ S + K LQE + DHP++++
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 62 YSWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
T +W+++E C G+L S L+ + L S+ A L AL YL SK ++
Sbjct: 80 IG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 138
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDAS--KAPSSMLPQAKCGTPCYMAPELFEEGGV 178
D+ N+L+ N KL DFGL+R + D++ KA LP +MAPE
Sbjct: 139 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESINFRRF 192
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSL 237
S ASD+W G ++E G PF G + ++ I +L+
Sbjct: 193 TS-ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKC 251
Query: 238 LVKDPAQRLHWSDL 251
DP++R +++L
Sbjct: 252 WAYDPSRRPRFTEL 265
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 114/254 (44%), Gaps = 19/254 (7%)
Query: 9 AIGRGKYSTVYKG---RKKKTIEYFAIKS----VDKSQKSKVLQEVRMLHSLDHPNVLRF 61
IG G++ V++G + AIK+ S + K LQE + DHP++++
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 62 YSWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
T +W+++E C G+L S L+ + L S+ A L AL YL SK ++
Sbjct: 74 IG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 132
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDAS--KAPSSMLPQAKCGTPCYMAPELFEEGGV 178
D+ N+L+ N KL DFGL+R + D++ KA LP +MAPE
Sbjct: 133 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESINFRRF 186
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSL 237
S ASD+W G ++E G PF G + ++ I +L+
Sbjct: 187 TS-ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKC 245
Query: 238 LVKDPAQRLHWSDL 251
DP++R +++L
Sbjct: 246 WAYDPSRRPRFTEL 259
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 114/254 (44%), Gaps = 19/254 (7%)
Query: 9 AIGRGKYSTVYKG---RKKKTIEYFAIKS----VDKSQKSKVLQEVRMLHSLDHPNVLRF 61
IG G++ V++G + AIK+ S + K LQE + DHP++++
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 62 YSWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
T +W+++E C G+L S L+ + L S+ A L AL YL SK ++
Sbjct: 77 IG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDAS--KAPSSMLPQAKCGTPCYMAPELFEEGGV 178
D+ N+L+ N KL DFGL+R + D++ KA LP +MAPE
Sbjct: 136 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESINFRRF 189
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSL 237
S ASD+W G ++E G PF G + ++ I +L+
Sbjct: 190 TS-ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKC 248
Query: 238 LVKDPAQRLHWSDL 251
DP++R +++L
Sbjct: 249 WAYDPSRRPRFTEL 262
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 114/254 (44%), Gaps = 19/254 (7%)
Query: 9 AIGRGKYSTVYKG---RKKKTIEYFAIKS----VDKSQKSKVLQEVRMLHSLDHPNVLRF 61
IG G++ V++G + AIK+ S + K LQE + DHP++++
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 62 YSWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
T +W+++E C G+L S L+ + L S+ A L AL YL SK ++
Sbjct: 79 IG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 137
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDAS--KAPSSMLPQAKCGTPCYMAPELFEEGGV 178
D+ N+L+ N KL DFGL+R + D++ KA LP +MAPE
Sbjct: 138 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESINFRRF 191
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSL 237
S ASD+W G ++E G PF G + ++ I +L+
Sbjct: 192 TS-ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKC 250
Query: 238 LVKDPAQRLHWSDL 251
DP++R +++L
Sbjct: 251 WAYDPSRRPRFTEL 264
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
++++E+ G+L+ LR+ N+ +++ L A + A++YL K I+ DL
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 141
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 142 NCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF------SIKSD 195
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 196 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 224
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
H E IGRG + VY G K I + A+KS+ D + S+ L E ++ HP
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 57 NVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL---AQDLVRALQYL 112
NVL + +VL Y GDL + +R + P +++DL + + ++YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYL 148
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE 171
SK ++ DL N +LDE K+ DFGLAR + D K S+ + P +MA E
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEXXSVHNKTGAKLPVKWMALE 206
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
+ + SD+W G +L+E G PP+
Sbjct: 207 SLQTQKF-TTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 102/233 (43%), Gaps = 30/233 (12%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV--------------DKSQKSKVLQEVRM 49
Y + I G Y V G + I AIK V D +VL+E+R+
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIP-VAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 50 LHSLDHPNVLR----FYSWYETSAH-LWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQ 103
L+ HPN+L F + E + H L+LV E + DL ++ Q + I+
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE-LMRTDLAQVIHDQRIVISPQHIQYFMY 141
Query: 104 DLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARK-LSDASKAPSSMLPQAKC 162
++ L LH G+++ DL P NILL +N +CDF LAR+ +DA+K
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT-------HYV 194
Query: 163 GTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
Y APEL + + D+W GCV+ E + + F G F + I+
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 50/255 (19%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFY 62
+Y + + +G G + V + ++ + FA+K V + + K +E+ ++ LDH N+++
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN-RELDIMKVLDHVNIIKLV 66
Query: 63 SWYETSA--------------------------------------HLWLVLEYC---VGG 81
++ T+ +L +++EY +
Sbjct: 67 DYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHK 126
Query: 82 DLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRT-KLCDF 140
L S +R +P + I L RA+ ++HS GI + D+KP N+L++ T KLCDF
Sbjct: 127 VLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDF 186
Query: 141 GLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRP 200
G A+KL + + A + Y APEL ++ + DLW +GCV E G+P
Sbjct: 187 GSAKKLIPSEPS------VAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240
Query: 201 PFVGR-EFTQLVKSI 214
F G QLV+ I
Sbjct: 241 LFSGETSIDQLVRII 255
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 102/233 (43%), Gaps = 30/233 (12%)
Query: 4 YHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV--------------DKSQKSKVLQEVRM 49
Y + I G Y V G + I AIK V D +VL+E+R+
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIP-VAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 50 LHSLDHPNVLR----FYSWYETSAH-LWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQ 103
L+ HPN+L F + E + H L+LV E + DL ++ Q + I+
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE-LMRTDLAQVIHDQRIVISPQHIQYFMY 141
Query: 104 DLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARK-LSDASKAPSSMLPQAKC 162
++ L LH G+++ DL P NILL +N +CDF LAR+ +DA+K
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT-------HYV 194
Query: 163 GTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
Y APEL + + D+W GCV+ E + + F G F + I+
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
++++E+ G+L+ LR+ N+ +++ L A + A++YL K I+ DL
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF------SIKSD 199
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPN 57
I + +G G++ V GR KK I AIK++ + Q+ L E ++ DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEIS-VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKG 116
++R S + +V EY G L S LR+ D Q + + + + ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEE 175
++ DL NIL++ N K+ DFGLAR L D P + P + +PE
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLARVLED---DPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 176 GGVHSYASDLWGLGCVLYEC--YAGRP 200
S ASD+W G VL+E Y RP
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERP 250
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 116/279 (41%), Gaps = 29/279 (10%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ +G G V + K+T E FA+K + K++ E+ S P+++R YE
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRAS-QCPHIVRIVDVYEN 126
Query: 68 ----SAHLWLVLEYCVGGDLMSLL--RQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
L +V E GG+L S + R D E ++ + + A+QYLHS I + D
Sbjct: 127 LYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRD 186
Query: 122 LKPSNILLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+KP N+L N KL DFG A++ + + + C TP Y+APE+ G
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP------CYTPYYVAPEVL---GP 237
Query: 179 HSY--ASDLWGLGCVLYECYAGRPPFVGREFTQL-------VKSILXXXXXXXXXXXXXX 229
Y + D W LG + Y G PPF + ++
Sbjct: 238 EKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEE 297
Query: 230 FANLINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
LI +LL +P QR ++ H W + T +P P
Sbjct: 298 VKXLIRNLLKTEPTQRXTITEFXNHP-WIXQSTKVPQTP 335
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPN 57
I + +G G++ V GR KK I AIK++ + Q+ L E ++ DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEIS-VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKG 116
++R S + +V EY G L S LR+ D Q + + + + ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEE 175
++ DL NIL++ N K+ DFGL+R L D P + P + +PE
Sbjct: 168 FVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 176 GGVHSYASDLWGLGCVLYEC--YAGRP 200
S ASD+W G VL+E Y RP
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERP 250
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
++++E+ G+L+ LR+ N+ ++ L A + A++YL K I+ DL
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF------SIKSD 194
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 6 IYEAIGRGKYSTVYKGRKK---KTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNV 58
I + IG G++ V G K K + AIK++ + Q+ L E ++ DHPNV
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 59 LRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGI 117
+ S + ++ E+ G L S LRQ D Q + + + + ++YL
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY 156
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
++ DL NIL++ N K+ DFGL+R L D + P+ + APE +
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 216
Query: 178 VHSYASDLWGLGCVLYEC--YAGRP 200
S ASD+W G V++E Y RP
Sbjct: 217 FTS-ASDVWSYGIVMWEVMSYGERP 240
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
H E IGRG + VY G K I + A+KS+ D + S+ L E ++ HP
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 109
Query: 57 NVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL---AQDLVRALQYL 112
NVL + +VL Y GDL + +R + P +++DL + + ++YL
Sbjct: 110 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYL 167
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE 171
SK ++ DL N +LDE K+ DFGLAR + D K S+ + P +MA E
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHNKTGAKLPVKWMALE 225
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
+ + SD+W G +L+E G PP+
Sbjct: 226 SLQTQKF-TTKSDVWSFGVLLWELMTRGAPPY 256
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
H E IGRG + VY G K I + A+KS+ D + S+ L E ++ HP
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 57 NVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL---AQDLVRALQYL 112
NVL + +VL Y GDL + +R + P +++DL + + ++YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYL 149
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE 171
SK ++ DL N +LDE K+ DFGLAR + D K S+ + P +MA E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHNKTGAKLPVKWMALE 207
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
+ + SD+W G +L+E G PP+
Sbjct: 208 SLQTQKF-TTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ +++ L A + A++YL K I+ DL
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF------SIKSD 199
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
H E IGRG + VY G K I + A+KS+ D + S+ L E ++ HP
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 110
Query: 57 NVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL---AQDLVRALQYL 112
NVL + +VL Y GDL + +R + P +++DL + + ++YL
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYL 168
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE 171
SK ++ DL N +LDE K+ DFGLAR + D K S+ + P +MA E
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHNKTGAKLPVKWMALE 226
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
+ + SD+W G +L+E G PP+
Sbjct: 227 SLQTQKF-TTKSDVWSFGVLLWELMTRGAPPY 257
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 80.1 bits (196), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 26/205 (12%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWY-- 65
E IG G + V+K + + + + IK V K K +EV+ L LDH N++ + +
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRV-KYNNEKAEREVKALAKLDHVNIVHYNGCWDG 75
Query: 66 -----ETSAH---------LWLVLEYCVGGDLMSLL--RQDNQLPEDSIRDLAQDLVRAL 109
ETS+ L++ +E+C G L + R+ +L + +L + + + +
Sbjct: 76 FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGV 135
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
Y+HSK +I DLKPSNI L + + K+ DFGL L + K S GT YM+
Sbjct: 136 DYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK------GTLRYMS 189
Query: 170 PELFEEGGVHSYASDLWGLGCVLYE 194
PE + DL+ LG +L E
Sbjct: 190 PEQISSQD-YGKEVDLYALGLILAE 213
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
++++E+ G+L+ LR+ N+ ++ L A + A++YL K I+ DL
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF------SIKSD 194
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPN 57
I + +G G++ V GR KK I AIK++ + Q+ L E ++ DHPN
Sbjct: 37 IDKVVGAGEFGEVCSGRLKLPSKKEIS-VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 95
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKG 116
++R S + +V EY G L S LR+ D Q + + + + ++YL G
Sbjct: 96 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 155
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEE 175
++ DL NIL++ N K+ DFGL+R L D P + P + +PE
Sbjct: 156 YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAIAY 212
Query: 176 GGVHSYASDLWGLGCVLYEC--YAGRP 200
S ASD+W G VL+E Y RP
Sbjct: 213 RKFTS-ASDVWSYGIVLWEVMSYGERP 238
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
H E IGRG + VY G K I + A+KS+ D + S+ L E ++ HP
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 88
Query: 57 NVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL---AQDLVRALQYL 112
NVL + +VL Y GDL + +R + P +++DL + + ++YL
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYL 146
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE 171
SK ++ DL N +LDE K+ DFGLAR + D K S+ + P +MA E
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHNKTGAKLPVKWMALE 204
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
+ + SD+W G +L+E G PP+
Sbjct: 205 SLQTQKF-TTKSDVWSFGVLLWELMTRGAPPY 235
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ +++ L A + A++YL K I+ DL
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 142
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF------SIKSD 196
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 225
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ +++ L A + A++YL K I+ DL
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF------SIKSD 199
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 113/254 (44%), Gaps = 19/254 (7%)
Query: 9 AIGRGKYSTVYKG---RKKKTIEYFAIKS----VDKSQKSKVLQEVRMLHSLDHPNVLRF 61
IG G++ V++G + AIK+ S + K LQE + DHP++++
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 62 YSWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
T +W+++E C G+L S L+ + L S+ A L AL YL SK ++
Sbjct: 77 IG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDAS--KAPSSMLPQAKCGTPCYMAPELFEEGGV 178
D+ N+L+ KL DFGL+R + D++ KA LP +MAPE
Sbjct: 136 DIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESINFRRF 189
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSL 237
S ASD+W G ++E G PF G + ++ I +L+
Sbjct: 190 TS-ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKC 248
Query: 238 LVKDPAQRLHWSDL 251
DP++R +++L
Sbjct: 249 WAYDPSRRPRFTEL 262
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
H E IGRG + VY G K I + A+KS+ D + S+ L E ++ HP
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 57 NVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL---AQDLVRALQYL 112
NVL + +VL Y GDL + +R + P +++DL + + ++YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYL 148
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE 171
SK ++ DL N +LDE K+ DFGLAR + D K S+ + P +MA E
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHNKTGAKLPVKWMALE 206
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
+ + SD+W G +L+E G PP+
Sbjct: 207 SLQTQKF-TTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
H E IGRG + VY G K I + A+KS+ D + S+ L E ++ HP
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 83
Query: 57 NVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL---AQDLVRALQYL 112
NVL + +VL Y GDL + +R + P +++DL + + ++YL
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYL 141
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE 171
SK ++ DL N +LDE K+ DFGLAR + D K S+ + P +MA E
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHNKTGAKLPVKWMALE 199
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
+ + SD+W G +L+E G PP+
Sbjct: 200 SLQTQKF-TTKSDVWSFGVLLWELMTRGAPPY 230
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
H E IGRG + VY G K I + A+KS+ D + S+ L E ++ HP
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 57 NVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL---AQDLVRALQYL 112
NVL + +VL Y GDL + +R + P +++DL + + ++YL
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYL 147
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE 171
SK ++ DL N +LDE K+ DFGLAR + D K S+ + P +MA E
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHNKTGAKLPVKWMALE 205
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
+ + SD+W G +L+E G PP+
Sbjct: 206 SLQTQKF-TTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPN 57
I + +G G++ V GR KK I AIK++ + Q+ L E ++ DHPN
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEIS-VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKG 116
++R S + +V EY G L S LR+ D Q + + + + ++YL G
Sbjct: 79 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 138
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEE 175
++ DL NIL++ N K+ DFGL+R L D P + P + +PE
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 176 GGVHSYASDLWGLGCVLYEC--YAGRP 200
S ASD+W G VL+E Y RP
Sbjct: 196 RKFTS-ASDVWSYGIVLWEVMSYGERP 221
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
H E IGRG + VY G K I + A+KS+ D + S+ L E ++ HP
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 57 NVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL---AQDLVRALQYL 112
NVL + +VL Y GDL + +R + P +++DL + + ++YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYL 149
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE 171
SK ++ DL N +LDE K+ DFGLAR + D K S+ + P +MA E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHNKTGAKLPVKWMALE 207
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
+ + SD+W G +L+E G PP+
Sbjct: 208 SLQTQKF-TTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ +++ L A + A++YL K I+ DL
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 142
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF------SIKSD 196
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 225
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 23/222 (10%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV-----LQEVRMLHSL--D 54
++H E IG G++ +V+K K+ +AIK K V L+EV H++
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREV-YAHAVLGQ 67
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQL----PEDSIRDLAQDLVRALQ 110
H +V+R++S + H+ + EYC GG L + ++ ++ E ++DL + R L+
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 111 YLHSKGIIYCDLKPSNILL----------DENGRTKLCDFGLARKLSDASKAPSSMLPQA 160
Y+HS +++ D+KPSNI + +E + K+ D PQ
Sbjct: 128 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 187
Query: 161 KCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
+ G ++A E+ +E H +D++ L + C AG P
Sbjct: 188 EEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPL 228
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 113/253 (44%), Gaps = 19/253 (7%)
Query: 10 IGRGKYSTVYKG---RKKKTIEYFAIKS----VDKSQKSKVLQEVRMLHSLDHPNVLRFY 62
IG G++ V++G + AIK+ S + K LQE + DHP++++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
T +W+++E C G+L S L+ + L S+ A L AL YL SK ++ D
Sbjct: 458 GVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRD 516
Query: 122 LKPSNILLDENGRTKLCDFGLARKLSDAS--KAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
+ N+L+ KL DFGL+R + D++ KA LP +MAPE
Sbjct: 517 IAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK------WMAPESINFRRFT 570
Query: 180 SYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLL 238
S ASD+W G ++E G PF G + ++ I +L+
Sbjct: 571 S-ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCW 629
Query: 239 VKDPAQRLHWSDL 251
DP++R +++L
Sbjct: 630 AYDPSRRPRFTEL 642
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ +++ L A + A++YL K I+ DL
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 153
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 154 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF------SIKSD 207
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 208 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 236
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ +++ L A + A++YL K I+ DL
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF------SIKSD 199
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ +++ L A + A++YL K I+ DL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF------SIKSD 194
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 23/222 (10%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV-----LQEVRMLHSL--D 54
++H E IG G++ +V+K K+ +AIK K V L+EV H++
Sbjct: 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREV-YAHAVLGQ 69
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQL----PEDSIRDLAQDLVRALQ 110
H +V+R++S + H+ + EYC GG L + ++ ++ E ++DL + R L+
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 111 YLHSKGIIYCDLKPSNILL----------DENGRTKLCDFGLARKLSDASKAPSSMLPQA 160
Y+HS +++ D+KPSNI + +E + K+ D PQ
Sbjct: 130 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 189
Query: 161 KCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
+ G ++A E+ +E H +D++ L + C AG P
Sbjct: 190 EEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPL 230
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPN 57
I + +G G++ V GR KK I AIK++ + Q+ L E ++ DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEIS-VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKG 116
++R S + +V EY G L S LR+ D Q + + + + ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEE 175
++ DL NIL++ N K+ DFGL+R L D P + P + +PE
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 176 GGVHSYASDLWGLGCVLYEC--YAGRP 200
S ASD+W G VL+E Y RP
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERP 250
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ +++ L A + A++YL K I+ DL
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 144
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 145 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF------SIKSD 198
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 199 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 227
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 42/254 (16%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV-----LQEVRMLHSL--DH 55
++H E IG G++ +V+K K+ +AIK K V L+EV H++ H
Sbjct: 8 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREV-YAHAVLGQH 66
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQL----PEDSIRDLAQDLVRALQY 111
+V+R++S + H+ + EYC GG L + ++ ++ E ++DL + R L+Y
Sbjct: 67 SHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRY 126
Query: 112 LHSKGIIYCDLKPSNILL----------DENGRTKLCDFGLARKLSDASKAPSSMLPQAK 161
+HS +++ D+KPSNI + +E + K+ D PQ +
Sbjct: 127 IHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE 186
Query: 162 CGTPCYMAPELFEEGGVHSYASDLWGLGCVL----------------YECYAGR----PP 201
G ++A E+ +E H +D++ L + +E GR P
Sbjct: 187 EGDSRFLANEVLQENYTHLPKADIFALALTVVXAAGAEPLPRNGDQWHEIRQGRLPRIPQ 246
Query: 202 FVGREFTQLVKSIL 215
+ +EFT+L+K ++
Sbjct: 247 VLSQEFTELLKVMI 260
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPN 57
I + +G G++ V GR KK I AIK++ + Q+ L E ++ DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEIS-VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKG 116
++R S + +V EY G L S LR+ D Q + + + + ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEE 175
++ DL NIL++ N K+ DFGL+R L D P + P + +PE
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 176 GGVHSYASDLWGLGCVLYEC--YAGRP 200
S ASD+W G VL+E Y RP
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPN 57
I + +G G++ V GR KK I AIK++ + Q+ L E ++ DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEIS-VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKG 116
++R S + +V EY G L S LR+ D Q + + + + ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEE 175
++ DL NIL++ N K+ DFGL+R L D P + P + +PE
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 176 GGVHSYASDLWGLGCVLYEC--YAGRP 200
S ASD+W G VL+E Y RP
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERP 250
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
H E IGRG + VY G K I + A+KS+ D + S+ L E ++ HP
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 150
Query: 57 NVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL---AQDLVRALQYL 112
NVL + +VL Y GDL + +R + P +++DL + + +++L
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFL 208
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE 171
SK ++ DL N +LDE K+ DFGLAR + D K S+ + P +MA E
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEFDSVHNKTGAKLPVKWMALE 266
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
+ + SD+W G +L+E G PP+
Sbjct: 267 SLQTQKF-TTKSDVWSFGVLLWELMTRGAPPY 297
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ +++ L A + A++YL K I+ DL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF------SIKSD 194
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 23/222 (10%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKV-----LQEVRMLHSL--D 54
++H E IG G++ +V+K K+ +AIK K V L+EV H++
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREV-YAHAVLGQ 67
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQL----PEDSIRDLAQDLVRALQ 110
H +V+R++S + H+ + EYC GG L + ++ ++ E ++DL + R L+
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 111 YLHSKGIIYCDLKPSNILL----------DENGRTKLCDFGLARKLSDASKAPSSMLPQA 160
Y+HS +++ D+KPSNI + +E + K+ D PQ
Sbjct: 128 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 187
Query: 161 KCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
+ G ++A E+ +E H +D++ L + C AG P
Sbjct: 188 EEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPL 228
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
H E IGRG + VY G K I + A+KS+ D + S+ L E ++ HP
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 57 NVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL---AQDLVRALQYL 112
NVL + +VL Y GDL + +R + P +++DL + + +++L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFL 150
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE 171
SK ++ DL N +LDE K+ DFGLAR + D K S+ + P +MA E
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEFDSVHNKTGAKLPVKWMALE 208
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
+ + SD+W G +L+E G PP+
Sbjct: 209 SLQTQKF-TTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 24/207 (11%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEV-RMLHSLDHPNVLRFYSWYE 66
+ +G G V + ++T + A+K + S K++ QEV + P+++ YE
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKAR--QEVDHHWQASGGPHIVCILDVYE 92
Query: 67 TSAH----LWLVLEYCVGGDLMSLL--RQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
H L +++E GG+L S + R D E ++ +D+ A+Q+LHS I +
Sbjct: 93 NMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHR 152
Query: 121 DLKPSNILL---DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
D+KP N+L +++ KL DFG A++ + + Q C TP Y+APE+ G
Sbjct: 153 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL-------QTPCYTPYYVAPEVL---G 202
Query: 178 VHSY--ASDLWGLGCVLYECYAGRPPF 202
Y + D+W LG ++Y G PPF
Sbjct: 203 PEKYDKSCDMWSLGVIMYILLCGFPPF 229
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
H E IGRG + VY G K I + A+KS+ D + S+ L E ++ HP
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 96
Query: 57 NVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL---AQDLVRALQYL 112
NVL + +VL Y GDL + +R + P +++DL + + +++L
Sbjct: 97 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFL 154
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE 171
SK ++ DL N +LDE K+ DFGLAR + D K S+ + P +MA E
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEFDSVHNKTGAKLPVKWMALE 212
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
+ + SD+W G +L+E G PP+
Sbjct: 213 SLQTQKF-TTKSDVWSFGVLLWELMTRGAPPY 243
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPN 57
I + +G G++ V GR KK I AIK++ + Q+ L E ++ DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEIS-VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKG 116
++R S + +V EY G L S LR+ D Q + + + + ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEE 175
++ DL NIL++ N K+ DFGL R L D P + P + +PE
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLGRVLED---DPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 176 GGVHSYASDLWGLGCVLYEC--YAGRP 200
S ASD+W G VL+E Y RP
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERP 250
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
H E IGRG + VY G K I + A+KS+ D + S+ L E ++ HP
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 86
Query: 57 NVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL---AQDLVRALQYL 112
NVL + +VL Y GDL + +R + P +++DL + + ++YL
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYL 144
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE 171
SK ++ DL N +LDE K+ DFGLAR + D K S+ + P +MA E
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHNKTGAKLPVKWMALE 202
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
+ + SD+W G +L+E G PP+
Sbjct: 203 SLQTQKF-TTKSDVWSFGVLLWELMTRGAPPY 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
H E IGRG + VY G K I + A+KS+ D + S+ L E ++ HP
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 57 NVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL---AQDLVRALQYL 112
NVL + +VL Y GDL + +R + P +++DL + + +++L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFL 149
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE 171
SK ++ DL N +LDE K+ DFGLAR + D K S+ + P +MA E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEFDSVHNKTGAKLPVKWMALE 207
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
+ + SD+W G +L+E G PP+
Sbjct: 208 SLQTQKF-TTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
H E IGRG + VY G K I + A+KS+ D + S+ L E ++ HP
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 57 NVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL---AQDLVRALQYL 112
NVL + +VL Y GDL + +R + P +++DL + + +++L
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFL 147
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE 171
SK ++ DL N +LDE K+ DFGLAR + D K S+ + P +MA E
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEFDSVHNKTGAKLPVKWMALE 205
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
+ + SD+W G +L+E G PP+
Sbjct: 206 SLQTQKF-TTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPN 57
I + +G G++ V GR KK I AIK++ + Q+ L E ++ DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEIS-VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKG 116
++R S + +V EY G L S LR+ D Q + + + + ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEE 175
++ DL NIL++ N K+ DFGL+R L D P + P + +PE
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 176 GGVHSYASDLWGLGCVLYEC--YAGRP 200
S ASD+W G VL+E Y RP
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERP 250
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPN 57
I + +G G++ V GR KK I AIK++ + Q+ L E ++ DHPN
Sbjct: 47 IDKVVGAGEFGEVCSGRLKLPSKKEIS-VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 105
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKG 116
++R S + +V EY G L S LR+ D Q + + + + ++YL G
Sbjct: 106 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 165
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEE 175
++ DL NIL++ N K+ DFGL+R L D P + P + +PE
Sbjct: 166 YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAIAY 222
Query: 176 GGVHSYASDLWGLGCVLYEC--YAGRP 200
S ASD+W G VL+E Y RP
Sbjct: 223 RKFTS-ASDVWSYGIVLWEVMSYGERP 248
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ ++ L A + A++YL K I+ DL
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF------SIKSD 199
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
H E IGRG + VY G K I + A+KS+ D + S+ L E ++ HP
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 57 NVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL---AQDLVRALQYL 112
NVL + +VL Y GDL + +R + P +++DL + + +++L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFL 149
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE 171
SK ++ DL N +LDE K+ DFGLAR + D K S+ + P +MA E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEFDSVHNKTGAKLPVKWMALE 207
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
+ + SD+W G +L+E G PP+
Sbjct: 208 SLQTQKF-TTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSV----DKSQKSKVLQEVRMLHSLDHP 56
H E IGRG + VY G K I + A+KS+ D + S+ L E ++ HP
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKI-HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 57 NVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL---AQDLVRALQYL 112
NVL + +VL Y GDL + +R + P +++DL + + +++L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFL 150
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE 171
SK ++ DL N +LDE K+ DFGLAR + D K S+ + P +MA E
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLD--KEFDSVHNKTGAKLPVKWMALE 208
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
+ + SD+W G +L+E G PP+
Sbjct: 209 SLQTQKF-TTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ ++ L A + A++YL K I+ DL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF------SIKSD 194
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
++++E+ G+L+ LR+ N+ ++ L A + A++YL K I+ DL
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF------SIKSD 192
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYE 221
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKS----VDKSQ---KSKVLQEVRMLHSLDHPNVLRFY 62
+G G + VYKG T A+K VD + K + QE++++ H N++
Sbjct: 39 MGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIR---DLAQDLVRALQYLHSKGIIY 119
+ L LV Y G L+ L + P S +AQ + +LH I+
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 156
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
D+K +NILLDE K+ DFGLAR + K +++ GT YMAPE G
Sbjct: 157 RDIKSANILLDEAFTAKISDFGLARA---SEKFAQTVMXSRIVGTTAYMAPEALR--GEI 211
Query: 180 SYASDLWGLGCVLYECYAGRP 200
+ SD++ G VL E G P
Sbjct: 212 TPKSDIYSFGVVLLEIITGLP 232
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 24/207 (11%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEV-RMLHSLDHPNVLRFYSWYE 66
+ +G G V + ++T + A+K + S K++ QEV + P+++ YE
Sbjct: 16 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKAR--QEVDHHWQASGGPHIVCILDVYE 73
Query: 67 TSAH----LWLVLEYCVGGDLMSLL--RQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYC 120
H L +++E GG+L S + R D E ++ +D+ A+Q+LHS I +
Sbjct: 74 NMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHR 133
Query: 121 DLKPSNILL---DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
D+KP N+L +++ KL DFG A++ + + Q C TP Y+APE+ G
Sbjct: 134 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL-------QTPCYTPYYVAPEVL---G 183
Query: 178 VHSY--ASDLWGLGCVLYECYAGRPPF 202
Y + D+W LG ++Y G PPF
Sbjct: 184 PEKYDKSCDMWSLGVIMYILLCGFPPF 210
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKS----VDKSQ---KSKVLQEVRMLHSLDHPNVLRFY 62
+G G + VYKG T A+K VD + K + QE++++ H N++
Sbjct: 39 MGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIR---DLAQDLVRALQYLHSKGIIY 119
+ L LV Y G L+ L + P S +AQ + +LH I+
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 156
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
D+K +NILLDE K+ DFGLAR + K +++ GT YMAPE G
Sbjct: 157 RDIKSANILLDEAFTAKISDFGLARA---SEKFAQTVMXXRIVGTTAYMAPEALR--GEI 211
Query: 180 SYASDLWGLGCVLYECYAGRP 200
+ SD++ G VL E G P
Sbjct: 212 TPKSDIYSFGVVLLEIITGLP 232
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ ++ L A + A++YL K I+ DL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF------SIKSD 194
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 37/227 (16%)
Query: 9 AIGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSL-DHPNVLRFYS 63
A G+ +T Y K A+K D S++ ++ E++M+ L H N++
Sbjct: 57 AFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLG 116
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIR-------------------DL-- 101
S ++L+ EYC GDL++ LR + + ED I DL
Sbjct: 117 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLC 176
Query: 102 -AQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQA 160
A + + +++L K ++ DL N+L+ K+CDFGLAR + + S+ + +
Sbjct: 177 FAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDI----MSDSNYVVRG 232
Query: 161 KCGTPC-YMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG 204
P +MAPE LFE G+++ SD+W G +L+E ++ G P+ G
Sbjct: 233 NARLPVKWMAPESLFE--GIYTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 12/207 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPS 125
++V EY G+L+ LR+ N ++ + +A + A++YL K I+ DL
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 159
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 160 NCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTF------SIKSD 213
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQL 210
+W G +L+E G P+ G + +Q+
Sbjct: 214 VWAFGVLLWEIATYGMSPYPGIDLSQV 240
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 124 RHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 176
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ +++ L A + A++YL K I+ +L
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAAR 386
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 387 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF------SIKSD 440
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 441 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 469
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 34/223 (15%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQ---EVRMLHSLD-HP 56
M++Y I IG+G + V K + E+ AIK + K++K+ + Q EVR+L ++ H
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-KNKKAFLNQAQIEVRLLELMNKHD 111
Query: 57 NVLRFY-----SWYETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRAL 109
+++Y + HL LV E + +L LLR N + + R AQ + AL
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 110 QYLHSK--GIIYCDLKPSNILLDENGRT--KLCDFG----LARKLSDASKAPSSMLPQAK 161
+L + II+CDLKP NILL R+ K+ DFG L +++ ++ P+
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVL 230
Query: 162 CGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
G P + A D+W LGC+L E + G P F G
Sbjct: 231 LGMP-------------YDLAIDMWSLGCILVEMHTGEPLFSG 260
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ +++ L A + A++YL K I+ +L
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAAR 344
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 345 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF------SIKSD 398
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 399 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 427
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAV 127
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 180
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 181 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 34/223 (15%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQ---EVRMLHSLD-HP 56
M++Y I IG+G + V K + E+ AIK + K++K+ + Q EVR+L ++ H
Sbjct: 34 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-KNKKAFLNQAQIEVRLLELMNKHD 92
Query: 57 NVLRFY-----SWYETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRAL 109
+++Y + HL LV E + +L LLR N + + R AQ + AL
Sbjct: 93 TEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 151
Query: 110 QYLHSK--GIIYCDLKPSNILLDENGRT--KLCDFG----LARKLSDASKAPSSMLPQAK 161
+L + II+CDLKP NILL R+ K+ DFG L +++ ++ P+
Sbjct: 152 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVL 211
Query: 162 CGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
G P + A D+W LGC+L E + G P F G
Sbjct: 212 LGMP-------------YDLAIDMWSLGCILVEMHTGEPLFSG 241
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 170
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 223
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 224 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 208
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 209 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKS----VDKSQ---KSKVLQEVRMLHSLDHPNVLRFY 62
+G G + VYKG T A+K VD + K + QE++++ H N++
Sbjct: 33 MGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIR---DLAQDLVRALQYLHSKGIIY 119
+ L LV Y G L+ L + P S +AQ + +LH I+
Sbjct: 91 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 150
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
D+K +NILLDE K+ DFGLAR + K ++ GT YMAPE G
Sbjct: 151 RDIKSANILLDEAFTAKISDFGLARA---SEKFAQXVMXXRIVGTTAYMAPEALR--GEI 205
Query: 180 SYASDLWGLGCVLYECYAGRP 200
+ SD++ G VL E G P
Sbjct: 206 TPKSDIYSFGVVLLEIITGLP 226
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 208
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 209 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 209
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 210 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 209
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 210 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 209
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 210 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 208
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 209 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ ++ L A + A++YL K I+ +L
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAAR 347
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 348 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF------SIKSD 401
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 402 VWAFGVLLWEIATYGMSPYPGIDLSQVYE 430
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 209
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 210 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 208
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 209 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 115
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 116 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 175
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 176 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 228
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 229 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 262
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 181
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 182 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 34/223 (15%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQ---EVRMLHSLD-HP 56
M++Y I IG+G + V K + E+ AIK + K++K+ + Q EVR+L ++ H
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-KNKKAFLNQAQIEVRLLELMNKHD 111
Query: 57 NVLRFY-----SWYETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRAL 109
+++Y + HL LV E + +L LLR N + + R AQ + AL
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 110 QYLHSK--GIIYCDLKPSNILLDENGRT--KLCDFG----LARKLSDASKAPSSMLPQAK 161
+L + II+CDLKP NILL R K+ DFG L +++ ++ P+
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVL 230
Query: 162 CGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVG 204
G P + A D+W LGC+L E + G P F G
Sbjct: 231 LGMP-------------YDLAIDMWSLGCILVEMHTGEPLFSG 260
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 181
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 182 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 170
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 223
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 224 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 22/232 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV---DKSQKSKVLQEVRMLHSLDHPNV 58
++Y + +G G V+ + AIK + D L+E++++ LDH N+
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNI 70
Query: 59 LRFYSWYETSAH--------------LWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQD 104
++ + S +++V EY + DL ++L Q L E+ R
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEY-METDLANVLEQ-GPLLEEHARLFMYQ 128
Query: 105 LVRALQYLHSKGIIYCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCG 163
L+R L+Y+HS +++ DLKP+N+ ++ E+ K+ DFGLAR + D + L +
Sbjct: 129 LLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLAR-IMDPHYSHKGHLSEGLV- 186
Query: 164 TPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSIL 215
T Y +P L ++ A D+W GC+ E G+ F G + ++ IL
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 127
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 180
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 181 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 90
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 91 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 150
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 151 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 203
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 204 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 237
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G++ V+ G + + A+K++ S L+E ++ +L H ++R Y+
Sbjct: 21 LGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQ----LPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++++ EY G L+ L+ D LP+ + D + + + Y+ K I+ DL+
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPK--LIDFSAQIAEGMAYIERKNYIHRDLR 137
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEEGGVHSYA 182
+N+L+ E+ K+ DFGLAR + D + + P + APE G +
Sbjct: 138 AANVLVSESLMCKIADFGLARVIED-----NEYTAREGAKFPIKWTAPEAI-NFGCFTIK 191
Query: 183 SDLWGLGCVLYECYA-GRPPFVGR 205
SD+W G +LYE G+ P+ GR
Sbjct: 192 SDVWSFGILLYEIVTYGKIPYPGR 215
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 142
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 195
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 196 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 143
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 196
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 197 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 143
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 196
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 197 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 181
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 182 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 102
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 103 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 162
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 163 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 215
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 216 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 249
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 176
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 142
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 195
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 196 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 143
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 196
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 197 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 1 MNQYHIYEAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKV-LQEVRMLHSLDH 55
M + + + IG+G++ V Y+G K A+K + ++ L E ++ L H
Sbjct: 11 MKELKLLQTIGKGEFGDVMLGDYRGNK------VAVKCIKNDATAQAFLAEASVMTQLRH 64
Query: 56 PNVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQ--LPEDSIRDLAQDLVRALQYL 112
N+++ E L++V EY G L+ LR + L D + + D+ A++YL
Sbjct: 65 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 124
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL 172
++ DL N+L+ E+ K+ DFGL ++ S S + LP + APE
Sbjct: 125 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS--STQDTGKLPVK------WTAPEA 176
Query: 173 FEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
E S SD+W G +L+E Y+ GR P+
Sbjct: 177 LREAAF-STKSDVWSFGILLWEIYSFGRVPY 206
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 66
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 67 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 126
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 127 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 179
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 180 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 213
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS---------KVLQEVRMLHS 52
+QY + +G G + +VY G + AIK V+K + S +V EV +L
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 53 LD--HPNVLRFYSWYETSAHLWLVLEYCVG-GDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
+ V+R W+E L+LE DL + + L E+ R ++ A+
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 110 QYLHSKGIIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
++ H+ G+++ D+K NIL+D N G KL DFG L D GT Y
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYS 176
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
PE H ++ +W LG +LY+ G PF
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G+Y VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ ++ L A + A++YL K I+ DL
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKF------SIKSD 192
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYE 221
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 96/223 (43%), Gaps = 17/223 (7%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+++Y +G G Y VYK T E AIK + ++ ++EV +L L H
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH 92
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
N++ S + L L+ EY DL + ++ + I+ L+ + + HS+
Sbjct: 93 RNIIELKSVIHHNHRLHLIFEYA-ENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR 151
Query: 116 GIIYCDLKPSNILL-----DENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAP 170
++ DLKP N+LL E K+ DFGLAR A P + T Y P
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR----AFGIPIRQFTH-EIITLWYRPP 206
Query: 171 ELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVG-REFTQLVK 212
E+ +S + D+W + C+ E P F G E QL K
Sbjct: 207 EILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK 249
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 6 IYEAIGRGKYSTVYKGRKK---KTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNV 58
I + IG G++ V G K K + AIK++ + Q+ L E ++ DHPNV
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 59 LRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGI 117
+ S + ++ E+ G L S LRQ D Q + + + + ++YL
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY 130
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
++ L NIL++ N K+ DFGL+R L D + P+ + APE +
Sbjct: 131 VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 190
Query: 178 VHSYASDLWGLGCVLYEC--YAGRP 200
S ASD+W G V++E Y RP
Sbjct: 191 FTS-ASDVWSYGIVMWEVMSYGERP 214
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 6 IYEAIGRGKYSTVYKGRKK---KTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNV 58
I E IG G++ V +GR K K AIK++ + Q+ + L E ++ +HPN+
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 59 LRFYSWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
+R S + ++ E+ G L S LR D Q + + + + ++YL
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSY 139
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
++ DL NIL++ N K+ DFGL+R L + S P+ + APE
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRK 199
Query: 178 VHSYASDLWGLGCVLYECYA-GRPPF 202
S ASD W G V++E + G P+
Sbjct: 200 FTS-ASDAWSYGIVMWEVMSFGERPY 224
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 12/209 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G++ VY+G KK A+K++ D + + L+E ++ + HPN+++
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKGIIYCDLKPS 125
+++ E+ G+L+ LR+ N+ ++ L A + A++YL K I+ DL
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 126 NILLDENGRTKLCDFGLARKLS-DASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
N L+ EN K+ DFGL+R ++ D A + K P +A F S SD
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF------SIKSD 192
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+W G +L+E G P+ G + +Q+ +
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYE 221
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPN 57
I + +G G++ V GR KK I AIK++ + Q+ L E ++ DHPN
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEIS-VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKG 116
++R S + +V E G L S LR+ D Q + + + + ++YL G
Sbjct: 79 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 138
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEE 175
++ DL NIL++ N K+ DFGL+R L D P + P + +PE
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 176 GGVHSYASDLWGLGCVLYEC--YAGRP 200
S ASD+W G VL+E Y RP
Sbjct: 196 RKFTS-ASDVWSYGIVLWEVMSYGERP 221
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPN 57
I + +G G++ V GR KK I AIK++ + Q+ L E ++ DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEIS-VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKG 116
++R S + +V E G L S LR+ D Q + + + + ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEE 175
++ DL NIL++ N K+ DFGL+R L D P + P + +PE
Sbjct: 168 AVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 176 GGVHSYASDLWGLGCVLYEC--YAGRP 200
S ASD+W G VL+E Y RP
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERP 250
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 34/222 (15%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSL------D 54
+Y + + IG+G + V K K ++ A+K V +K + +E+R+L L +
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQ 110
NV+ + H+ + E + +L L++++ LP +R A +++ L
Sbjct: 158 TMNVIHMLENFTFRNHICMTFE-LLSMNLYELIKKNKFQGFSLP--LVRKFAHSILQCLD 214
Query: 111 YLHSKGIIYCDLKPSNILLDENGRT--KLCDFGLARKLSDASKAPSSMLPQAKCGTPC-- 166
LH II+CDLKP NILL + GR+ K+ DFG SS + T
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG------------SSCYEHQRVYTXIQS 262
Query: 167 --YMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE 206
Y APE+ G + D+W LGC+L E G P G +
Sbjct: 263 RFYRAPEVI-LGARYGMPIDMWSLGCILAELLTGYPLLPGED 303
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 26/218 (11%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSL------D 54
+Y + + IG+G + V K K ++ A+K V +K + +E+R+L L +
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQ 110
NV+ + H+ + E + +L L++++ LP +R A +++ L
Sbjct: 158 TMNVIHMLENFTFRNHICMTFE-LLSMNLYELIKKNKFQGFSLP--LVRKFAHSILQCLD 214
Query: 111 YLHSKGIIYCDLKPSNILLDENGRT--KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
LH II+CDLKP NILL + GR+ K+ DFG S + Y
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--------SSCYEHQRVYTXIQSRFYR 266
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE 206
APE+ G + D+W LGC+L E G P G +
Sbjct: 267 APEVI-LGARYGMPIDMWSLGCILAELLTGYPLLPGED 303
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 1 MNQYHIYEAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKV-LQEVRMLHSLDH 55
M + + + IG+G++ V Y+G K A+K + ++ L E ++ L H
Sbjct: 5 MKELKLLQTIGKGEFGDVMLGDYRGNK------VAVKCIKNDATAQAFLAEASVMTQLRH 58
Query: 56 PNVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQ--LPEDSIRDLAQDLVRALQYL 112
N+++ E L++V EY G L+ LR + L D + + D+ A++YL
Sbjct: 59 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 118
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL 172
++ DL N+L+ E+ K+ DFGL ++ S S + LP + APE
Sbjct: 119 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS--STQDTGKLPVK------WTAPEA 170
Query: 173 FEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
E S SD+W G +L+E Y+ GR P+
Sbjct: 171 LREKKF-STKSDVWSFGILLWEIYSFGRVPY 200
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 26/218 (11%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQKSKVLQEVRMLHSL------D 54
+Y + + IG+G + V K K ++ A+K V +K + +E+R+L L +
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQ 110
NV+ + H+ + E + +L L++++ LP +R A +++ L
Sbjct: 158 TMNVIHMLENFTFRNHICMTFE-LLSMNLYELIKKNKFQGFSLP--LVRKFAHSILQCLD 214
Query: 111 YLHSKGIIYCDLKPSNILLDENGRT--KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
LH II+CDLKP NILL + GR+ K+ DFG S + Y
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--------SSCYEHQRVYXXIQSRFYR 266
Query: 169 APELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE 206
APE+ G + D+W LGC+L E G P G +
Sbjct: 267 APEVI-LGARYGMPIDMWSLGCILAELLTGYPLLPGED 303
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 1 MNQYHIYEAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKV-LQEVRMLHSLDH 55
M + + + IG+G++ V Y+G K A+K + ++ L E ++ L H
Sbjct: 20 MKELKLLQTIGKGEFGDVMLGDYRGNK------VAVKCIKNDATAQAFLAEASVMTQLRH 73
Query: 56 PNVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQ--LPEDSIRDLAQDLVRALQYL 112
N+++ E L++V EY G L+ LR + L D + + D+ A++YL
Sbjct: 74 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 133
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL 172
++ DL N+L+ E+ K+ DFGL ++ S S + LP + APE
Sbjct: 134 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS--STQDTGKLPVK------WTAPEA 185
Query: 173 FEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
E S SD+W G +L+E Y+ GR P+
Sbjct: 186 LREKKF-STKSDVWSFGILLWEIYSFGRVPY 215
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPN 57
I + +G G++ V GR KK I AIK++ + Q+ L E ++ DHPN
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEIS-VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 58 VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKG 116
++R S + +V E G L S LR+ D Q + + + + ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEE 175
++ DL NIL++ N K+ DFGL+R L D P + P + +PE
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 176 GGVHSYASDLWGLGCVLYEC--YAGRP 200
S ASD+W G VL+E Y RP
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERP 250
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 6 IYEAIGRGKYSTVYKGRKK---KTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNV 58
I E IG G++ V +GR K K AIK++ + Q+ + L E ++ +HPN+
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 59 LRFYSWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
+R S + ++ E+ G L S LR D Q + + + + ++YL
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSY 137
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
++ DL NIL++ N K+ DFGL+R L + S P+ + APE
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRK 197
Query: 178 VHSYASDLWGLGCVLYEC--YAGRP 200
S ASD W G V++E + RP
Sbjct: 198 FTS-ASDAWSYGIVMWEVMSFGERP 221
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 32/201 (15%)
Query: 36 DKSQK--SKVLQEVRMLHSL-DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD-- 90
D ++K S ++ E+ M+ + H N++ L++++EY G+L LR
Sbjct: 124 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 183
Query: 91 ---------NQLPED--SIRDLAQ---DLVRALQYLHSKGIIYCDLKPSNILLDENGRTK 136
N++PE+ + +DL L R ++YL S+ I+ DL N+L+ EN K
Sbjct: 184 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 243
Query: 137 LCDFGLARKLSDAS---KAPSSMLPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVL 192
+ DFGLAR +++ K + LP +MAPE LF+ V+++ SD+W G ++
Sbjct: 244 IADFGLARDINNIDYYKKTTNGRLPVK------WMAPEALFDR--VYTHQSDVWSFGVLM 295
Query: 193 YECYA-GRPPFVGREFTQLVK 212
+E + G P+ G +L K
Sbjct: 296 WEIFTLGGSPYPGIPVEELFK 316
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G++ V+ G + + A+K++ S L+E ++ +L H ++R Y+
Sbjct: 20 LGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQ----LPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
++++ E+ G L+ L+ D LP+ + D + + + Y+ K I+ DL+
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPK--LIDFSAQIAEGMAYIERKNYIHRDLR 136
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEEGGVHSYA 182
+N+L+ E+ K+ DFGLAR + D + + P + APE G +
Sbjct: 137 AANVLVSESLMCKIADFGLARVIED-----NEYTAREGAKFPIKWTAPEAI-NFGCFTIK 190
Query: 183 SDLWGLGCVLYECYA-GRPPFVGR 205
S++W G +LYE G+ P+ GR
Sbjct: 191 SNVWSFGILLYEIVTYGKIPYPGR 214
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 1 MNQYHIYEAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKV-LQEVRMLHSLDH 55
M + + + IG+G++ V Y+G K A+K + ++ L E ++ L H
Sbjct: 192 MKELKLLQTIGKGEFGDVMLGDYRGNK------VAVKCIKNDATAQAFLAEASVMTQLRH 245
Query: 56 PNVLRFYS-WYETSAHLWLVLEYCVGGDLMSLLRQDNQ--LPEDSIRDLAQDLVRALQYL 112
N+++ E L++V EY G L+ LR + L D + + D+ A++YL
Sbjct: 246 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 113 HSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPEL 172
++ DL N+L+ E+ K+ DFGL ++ S S + LP + APE
Sbjct: 306 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS--STQDTGKLPVK------WTAPEA 357
Query: 173 FEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
E S SD+W G +L+E Y+ GR P+
Sbjct: 358 LREKKF-STKSDVWSFGILLWEIYSFGRVPY 387
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 32/230 (13%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTI---EYFAIKS-VDKSQKSKVLQEVRMLH-SLDHP 56
N + I + IG G +S+VY + + E A+K + S ++ E++ L +
Sbjct: 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQD 80
Query: 57 NVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKG 116
NV+ + + H+ + + Y + +L N L +R+ +L +AL+ +H G
Sbjct: 81 NVMGVKYCFRKNDHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQFG 137
Query: 117 IIYCDLKPSNILLDEN-GRTKLCDFGLARKLSDA---------SKAPSSMLPQAKC---- 162
I++ D+KPSN L + + L DFGLA+ D S+A Q KC
Sbjct: 138 IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICL 197
Query: 163 ----------GTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
GTP + APE+ + + A D+W G + +GR PF
Sbjct: 198 SRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 18/219 (8%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQK-----------SKVLQEVRML 50
+Y +G G + V+ K+ + +K + K + KV E+ +L
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 51 HSLDHPNVLRFYSWYETSAHLWLVLE-YCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
++H N+++ +E LV+E + G DL + + + +L E + + LV A+
Sbjct: 84 SRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAV 143
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
YL K II+ D+K NI++ E+ KL DFG A L L CGT Y A
Sbjct: 144 GYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK------LFYTFCGTIEYCA 197
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFT 208
PE+ ++W LG LY PF E T
Sbjct: 198 PEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET 236
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 108/260 (41%), Gaps = 14/260 (5%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEY---FAIKSVD----KSQKSKVLQEVRMLHSLD 54
++ HI + IG G V GR + + AIK++ + Q+ L E ++ D
Sbjct: 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD 108
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLH 113
HPN++R +V EY G L + LR D Q + + + + ++YL
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS 168
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPEL 172
G ++ DL N+L+D N K+ DFGL+R L D P + P + APE
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED---DPDAAXTTTGGKIPIRWTAPEA 225
Query: 173 FEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFA 231
S ASD+W G V++E A G P+ ++ S+
Sbjct: 226 IAF-RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALH 284
Query: 232 NLINSLLVKDPAQRLHWSDL 251
L+ KD AQR +S +
Sbjct: 285 QLMLDCWHKDRAQRPRFSQI 304
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 124/274 (45%), Gaps = 34/274 (12%)
Query: 6 IYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK---VLQEVRMLHSLD-HPNVLRF 61
+ + G ++ VY+ + + +A+K + +++ K ++QEV + L HPN+++F
Sbjct: 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF 91
Query: 62 YSWYETS--------AHLWLVLEYCVGGDLMSLLRQDNQLPE--DSIRDLAQDLVRALQY 111
S A L+ E C G + L + +++ P D++ + RA+Q+
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQH 151
Query: 112 LHSKG--IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQA-------KC 162
+H + II+ DLK N+LL G KLCDFG A +S S +A +
Sbjct: 152 MHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN 211
Query: 163 GTPCYMAPELFEEGGVHS-----YASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXX 217
TP Y PE+ + ++S D+W LGC+LY + PF E ++ +
Sbjct: 212 TTPMYRTPEIID---LYSNFPIGEKQDIWALGCILYLLCFRQHPF---EDGAKLRIVNGK 265
Query: 218 XXXXXXXXXXXXFANLINSLLVKDPAQRLHWSDL 251
F +LI ++L +P +RL +++
Sbjct: 266 YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEV 299
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 32/201 (15%)
Query: 36 DKSQK--SKVLQEVRMLHSL-DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD-- 90
D ++K S ++ E+ M+ + H N++ L++++EY G+L LR
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 91 ---------NQLPED--SIRDLAQ---DLVRALQYLHSKGIIYCDLKPSNILLDENGRTK 136
N++PE+ + +DL L R ++YL S+ I+ DL N+L+ EN K
Sbjct: 138 PGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 197
Query: 137 LCDFGLARKLSD---ASKAPSSMLPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVL 192
+ DFGLAR +++ K + LP +MAPE LF+ V+++ SD+W G ++
Sbjct: 198 IADFGLARDINNIDXXKKTTNGRLPVK------WMAPEALFDR--VYTHQSDVWSFGVLM 249
Query: 193 YECYA-GRPPFVGREFTQLVK 212
+E + G P+ G +L K
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK 270
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 108/260 (41%), Gaps = 14/260 (5%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEY---FAIKSVD----KSQKSKVLQEVRMLHSLD 54
++ HI + IG G V GR + + AIK++ + Q+ L E ++ D
Sbjct: 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD 108
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLH 113
HPN++R +V EY G L + LR D Q + + + + ++YL
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS 168
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPEL 172
G ++ DL N+L+D N K+ DFGL+R L D P + P + APE
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED---DPDAAYTTTGGKIPIRWTAPEA 225
Query: 173 FEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFA 231
S ASD+W G V++E A G P+ ++ S+
Sbjct: 226 IAF-RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALH 284
Query: 232 NLINSLLVKDPAQRLHWSDL 251
L+ KD AQR +S +
Sbjct: 285 QLMLDCWHKDRAQRPRFSQI 304
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 32/201 (15%)
Query: 36 DKSQK--SKVLQEVRMLHSL-DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD-- 90
D ++K S ++ E+ M+ + H N++ L++++EY G+L LR
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 91 ---------NQLPED--SIRDLAQ---DLVRALQYLHSKGIIYCDLKPSNILLDENGRTK 136
N++PE+ + +DL L R ++YL S+ I+ DL N+L+ EN K
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 197
Query: 137 LCDFGLARKLSD---ASKAPSSMLPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVL 192
+ DFGLAR +++ K + LP +MAPE LF+ V+++ SD+W G ++
Sbjct: 198 IADFGLARDINNIDXXKKTTNGRLPVK------WMAPEALFDR--VYTHQSDVWSFGVLM 249
Query: 193 YECYA-GRPPFVGREFTQLVK 212
+E + G P+ G +L K
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK 270
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 14/219 (6%)
Query: 6 IYEAIGRGKYSTVYKGRKK---KTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNV 58
I IG G++ V GR K K AIK++ + Q+ L E ++ DHPNV
Sbjct: 47 IERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNV 106
Query: 59 LRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGI 117
+ + +V+E+ G L + LR+ D Q + + + + ++YL G
Sbjct: 107 VHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY 166
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEEG 176
++ DL NIL++ N K+ DFGL+R + D P ++ P + APE +
Sbjct: 167 VHRDLAARNILVNSNLVCKVSDFGLSRVIED---DPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 177 GVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
S ASD+W G V++E + G P+ ++K+I
Sbjct: 224 KFTS-ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 261
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 4/195 (2%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYETSA 69
+GRG + V++ + K+T A+K V + + +V +E+ L P ++ Y
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRV-EELVACAGLSSPRIVPLYGAVREGP 139
Query: 70 HLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILL 129
+ + +E GG L L++Q LPED + L+YLH++ I++ D+K N+LL
Sbjct: 140 WVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL 199
Query: 130 DENG-RTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGL 188
+G R LCDFG A L S + GT +MAPE+ G D+W
Sbjct: 200 SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV-MGKPCDAKVDIWSS 258
Query: 189 GCVLYECYAGRPPFV 203
C++ G P+
Sbjct: 259 CCMMLHMLNGCHPWT 273
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 39/218 (17%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWY-- 65
E IG G + V+K + + + + I+ V K K +EV+ L LDH N++ + +
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRV-KYNNEKAEREVKALAKLDHVNIVHYNGCWDG 76
Query: 66 -----ETSAH----------------------LWLVLEYCVGGDLMSLL--RQDNQLPED 96
ETS L++ +E+C G L + R+ +L +
Sbjct: 77 FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 136
Query: 97 SIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSM 156
+L + + + + Y+HSK +I+ DLKPSNI L + + K+ DFGL L + K S
Sbjct: 137 LALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSK 196
Query: 157 LPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYE 194
GT YM+PE + DL+ LG +L E
Sbjct: 197 ------GTLRYMSPEQISSQD-YGKEVDLYALGLILAE 227
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 32/201 (15%)
Query: 36 DKSQK--SKVLQEVRMLHSL-DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD-- 90
D ++K S ++ E+ M+ + H N++ L++++EY G+L LR
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 91 ---------NQLPED--SIRDLAQ---DLVRALQYLHSKGIIYCDLKPSNILLDENGRTK 136
N++PE+ + +DL L R ++YL S+ I+ DL N+L+ EN K
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 197
Query: 137 LCDFGLARKLSDAS---KAPSSMLPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVL 192
+ DFGLAR +++ K + LP +MAPE LF+ V+++ SD+W G ++
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVK------WMAPEALFDR--VYTHQSDVWSFGVLM 249
Query: 193 YECYA-GRPPFVGREFTQLVK 212
+E + G P+ G +L K
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK 270
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 32/201 (15%)
Query: 36 DKSQK--SKVLQEVRMLHSL-DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD-- 90
D ++K S ++ E+ M+ + H N++ L++++EY G+L LR
Sbjct: 67 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 126
Query: 91 ---------NQLPED--SIRDLAQ---DLVRALQYLHSKGIIYCDLKPSNILLDENGRTK 136
N++PE+ + +DL L R ++YL S+ I+ DL N+L+ EN K
Sbjct: 127 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 186
Query: 137 LCDFGLARKLSDAS---KAPSSMLPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVL 192
+ DFGLAR +++ K + LP +MAPE LF+ V+++ SD+W G ++
Sbjct: 187 IADFGLARDINNIDYYKKTTNGRLPVK------WMAPEALFDR--VYTHQSDVWSFGVLM 238
Query: 193 YECYA-GRPPFVGREFTQLVK 212
+E + G P+ G +L K
Sbjct: 239 WEIFTLGGSPYPGIPVEELFK 259
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 30/194 (15%)
Query: 41 SKVLQEVRMLHSL-DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD--------- 90
S ++ E+ M+ + H N++ L++++EY G+L LR
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 91 --NQLPED--SIRDLAQ---DLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLA 143
N++PE+ + +DL L R ++YL S+ I+ DL N+L+ EN K+ DFGLA
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 144 RKLSDAS---KAPSSMLPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-G 198
R +++ K + LP +MAPE LF+ V+++ SD+W G +++E + G
Sbjct: 205 RDINNIDYYKKTTNGRLPVK------WMAPEALFDR--VYTHQSDVWSFGVLMWEIFTLG 256
Query: 199 RPPFVGREFTQLVK 212
P+ G +L K
Sbjct: 257 GSPYPGIPVEELFK 270
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 4/195 (2%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYETSA 69
+GRG + V++ + K+T A+K V + + +V +E+ L P ++ Y
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRV-EELVACAGLSSPRIVPLYGAVREGP 123
Query: 70 HLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILL 129
+ + +E GG L L++Q LPED + L+YLH++ I++ D+K N+LL
Sbjct: 124 WVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL 183
Query: 130 DENG-RTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGL 188
+G R LCDFG A L S + GT +MAPE+ G D+W
Sbjct: 184 SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV-MGKPCDAKVDIWSS 242
Query: 189 GCVLYECYAGRPPFV 203
C++ G P+
Sbjct: 243 CCMMLHMLNGCHPWT 257
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 32/201 (15%)
Query: 36 DKSQK--SKVLQEVRMLHSL-DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD-- 90
D ++K S ++ E+ M+ + H N++ L++++EY G+L LR
Sbjct: 70 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 129
Query: 91 ---------NQLPED--SIRDLAQ---DLVRALQYLHSKGIIYCDLKPSNILLDENGRTK 136
N++PE+ + +DL L R ++YL S+ I+ DL N+L+ EN K
Sbjct: 130 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 189
Query: 137 LCDFGLARKLSDAS---KAPSSMLPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVL 192
+ DFGLAR +++ K + LP +MAPE LF+ V+++ SD+W G ++
Sbjct: 190 IADFGLARDINNIDYYKKTTNGRLPVK------WMAPEALFDR--VYTHQSDVWSFGVLM 241
Query: 193 YECYA-GRPPFVGREFTQLVK 212
+E + G P+ G +L K
Sbjct: 242 WEIFTLGGSPYPGIPVEELFK 262
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 32/201 (15%)
Query: 36 DKSQK--SKVLQEVRMLHSL-DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD-- 90
D ++K S ++ E+ M+ + H N++ L++++EY G+L LR
Sbjct: 65 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 124
Query: 91 ---------NQLPED--SIRDLAQ---DLVRALQYLHSKGIIYCDLKPSNILLDENGRTK 136
N++PE+ + +DL L R ++YL S+ I+ DL N+L+ EN K
Sbjct: 125 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMK 184
Query: 137 LCDFGLARKLSDAS---KAPSSMLPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVL 192
+ DFGLAR +++ K + LP +MAPE LF+ V+++ SD+W G ++
Sbjct: 185 IADFGLARDINNIDYYKKTTNGRLPVK------WMAPEALFDR--VYTHQSDVWSFGVLM 236
Query: 193 YECYA-GRPPFVGREFTQLVK 212
+E + G P+ G +L K
Sbjct: 237 WEIFTLGGSPYPGIPVEELFK 257
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 32/201 (15%)
Query: 36 DKSQK--SKVLQEVRMLHSL-DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD-- 90
D ++K S ++ E+ M+ + H N++ L++++EY G+L LR
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 91 ---------NQLPED--SIRDLAQ---DLVRALQYLHSKGIIYCDLKPSNILLDENGRTK 136
N++PE+ + +DL L R ++YL S+ I+ DL N+L+ EN K
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 197
Query: 137 LCDFGLARKLSDAS---KAPSSMLPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVL 192
+ DFGLAR +++ K + LP +MAPE LF+ V+++ SD+W G ++
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVK------WMAPEALFDR--VYTHQSDVWSFGVLM 249
Query: 193 YECYA-GRPPFVGREFTQLVK 212
+E + G P+ G +L K
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK 270
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 113/246 (45%), Gaps = 35/246 (14%)
Query: 43 VLQEVRML-HSLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIR-- 99
L E+++L S DHPNV+R+Y T L++ LE C +L L+ N + +++++
Sbjct: 73 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKN-VSDENLKLQ 130
Query: 100 ------DLAQDLVRALQYLHSKGIIYCDLKPSNILLD-------------ENGRTKLCDF 140
L + + + +LHS II+ DLKP NIL+ EN R + DF
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 141 GLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVH--SYASDLWGLGCVLYECYA- 197
GL +KL D+ + GT + APEL EE + + D++ +GCV Y +
Sbjct: 191 GLCKKL-DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK 249
Query: 198 GRPPF---VGREFTQLVKSI--LXXXXXXXXXXXXXXFANLINSLLVKDPAQRLHWSDLC 252
G+ PF RE + +++ I L +LI+ ++ DP +R +
Sbjct: 250 GKHPFGDKYSRE-SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 308
Query: 253 GHA-FW 257
H FW
Sbjct: 309 RHPLFW 314
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQ---EVRMLHSLDHPNVLRFYSWYE 66
+GRG + VYKGR + ++ + LQ EV M+ H N+LR +
Sbjct: 46 LGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCM 105
Query: 67 TSAHLWLVLEYCVGGDLMSLLRQ--DNQLPED--SIRDLAQDLVRALQYLHSK---GIIY 119
T LV Y G + S LR+ ++Q P D + +A R L YLH II+
Sbjct: 106 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIH 165
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
D+K +NILLDE + DFGLA KL D + A GT ++APE G
Sbjct: 166 RDVKAANILLDEEFEAVVGDFGLA-KLMDYK---DXHVXXAVRGTIGHIAPEYLSTGK-S 220
Query: 180 SYASDLWGLGCVLYECYAGRPPF 202
S +D++G G +L E G+ F
Sbjct: 221 SEKTDVFGYGVMLLELITGQRAF 243
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 98/237 (41%), Gaps = 31/237 (13%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYF--AIKSV----DKSQKSKVLQEVRMLHSL-D 54
N + IG G + V K R KK AIK + K E+ +L L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED----------------SI 98
HPN++ E +L+L +EY G+L+ LR+ L D +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 99 RDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLP 158
A D+ R + YL K I+ DL NIL+ EN K+ DFGL+R K LP
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 204
Query: 159 QAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
+MA E V++ SD+W G +L+E + G P+ G +L + +
Sbjct: 205 VR------WMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 254
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK--VLQEVRMLHSLDHPNVLRFYSWYET 67
+G G++ V G+ + + AIK + + S+ ++E +++ +L H +++ Y
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 68 SAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSN 126
++++ EY G L++ LR+ ++ + ++ +D+ A++YL SK ++ DL N
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 150
Query: 127 ILLDENGRTKLCDFGLARKLSDASKAPS--SMLPQAKCGTPCYMAPELFEEGGVHSYASD 184
L+++ G K+ DFGL+R + D + S S P + PE+ S SD
Sbjct: 151 CLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR------WSPPEVLMYSKFSS-KSD 203
Query: 185 LWGLGCVLYECYA-GRPPF 202
+W G +++E Y+ G+ P+
Sbjct: 204 IWAFGVLMWEIYSLGKMPY 222
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 113/246 (45%), Gaps = 35/246 (14%)
Query: 43 VLQEVRML-HSLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIR-- 99
L E+++L S DHPNV+R+Y T L++ LE C +L L+ N + +++++
Sbjct: 73 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKN-VSDENLKLQ 130
Query: 100 ------DLAQDLVRALQYLHSKGIIYCDLKPSNILLD-------------ENGRTKLCDF 140
L + + + +LHS II+ DLKP NIL+ EN R + DF
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 141 GLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVH--SYASDLWGLGCVLYECYA- 197
GL +KL D+ + GT + APEL EE + + D++ +GCV Y +
Sbjct: 191 GLCKKL-DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK 249
Query: 198 GRPPF---VGREFTQLVKSI--LXXXXXXXXXXXXXXFANLINSLLVKDPAQRLHWSDLC 252
G+ PF RE + +++ I L +LI+ ++ DP +R +
Sbjct: 250 GKHPFGDKYSRE-SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 308
Query: 253 GHA-FW 257
H FW
Sbjct: 309 RHPLFW 314
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 6 IYEAIGRGKYSTVYKGRKK---KTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNV 58
I IG G++ V GR K K AIK++ + Q+ L E ++ DHPN+
Sbjct: 26 IERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 85
Query: 59 LRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGI 117
+ S + +V EY G L + L++ D Q + + + + ++YL G
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGY 145
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEEG 176
++ DL NIL++ N K+ DFGL+R L D P + P + APE
Sbjct: 146 VHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 177 GVHSYASDLWGLGCVLYEC--YAGRP 200
S ASD+W G V++E Y RP
Sbjct: 203 KFTS-ASDVWSYGIVMWEVVSYGERP 227
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 4/195 (2%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYETSA 69
+GRG + V++ + K+T A+K V + + +V +E+ L P ++ Y
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRV-EELVACAGLSSPRIVPLYGAVREGP 137
Query: 70 HLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILL 129
+ + +E GG L L++Q LPED + L+YLH++ I++ D+K N+LL
Sbjct: 138 WVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL 197
Query: 130 DENG-RTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGL 188
+G R LCDFG A L S + GT +MAPE+ G D+W
Sbjct: 198 SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV-MGKPCDAKVDIWSS 256
Query: 189 GCVLYECYAGRPPFV 203
C++ G P+
Sbjct: 257 CCMMLHMLNGCHPWT 271
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 12/143 (8%)
Query: 73 LVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLD-E 131
LV EY D L + L + IR +L++AL Y HSKGI++ D+KP N+++D +
Sbjct: 112 LVFEYINNTDFKQLYQI---LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 168
Query: 132 NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCV 191
+ +L D+GLA A + + + + PEL + ++ Y+ D+W LGC+
Sbjct: 169 QKKLRLIDWGLAEFYHPAQEY------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 222
Query: 192 LYECYAGRPPFV-GRE-FTQLVK 212
L R PF G++ + QLV+
Sbjct: 223 LASMIFRREPFFHGQDNYDQLVR 245
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK--VLQEVRMLHSLDHPNVLRFYSWYET 67
+G G++ V G+ + + AIK + + S+ ++E +++ +L H +++ Y
Sbjct: 12 LGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 68 SAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSN 126
++++ EY G L++ LR+ ++ + ++ +D+ A++YL SK ++ DL N
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 130
Query: 127 ILLDENGRTKLCDFGLARKLSD-------ASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
L+++ G K+ DFGL+R + D SK P P PE+
Sbjct: 131 CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP-----------PEVLMYSKFS 179
Query: 180 SYASDLWGLGCVLYECYA-GRPPF 202
S SD+W G +++E Y+ G+ P+
Sbjct: 180 S-KSDIWAFGVLMWEIYSLGKMPY 202
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 8 EAIGRGKYSTVYKG---RKKKTIEYFAIKSVDKSQKSK--VLQEVRMLHSLDHPNVLRFY 62
+ IG G++ V+ G K K AIK++ + S+ ++E ++ L HP +++ Y
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKV----AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
A + LV E+ G L LR Q +++ + D+ + YL +I+ D
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRD 128
Query: 122 LKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPELFEEGGV 178
L N L+ EN K+ DFG+ R + D S+ GT + +PE+F
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-------GTKFPVKWASPEVF-SFSR 180
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
+S SD+W G +++E ++ G+ P+ R +++V+ I
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 98/237 (41%), Gaps = 31/237 (13%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYF--AIKSV----DKSQKSKVLQEVRMLHSL-D 54
N + IG G + V K R KK AIK + K E+ +L L
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED----------------SI 98
HPN++ E +L+L +EY G+L+ LR+ L D +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 99 RDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLP 158
A D+ R + YL K I+ DL NIL+ EN K+ DFGL+R K LP
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 194
Query: 159 QAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
+MA E V++ SD+W G +L+E + G P+ G +L + +
Sbjct: 195 VR------WMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 244
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK--VLQEVRMLHSLDHPNVLRFYSWYET 67
+G G++ V G+ + + AIK + + S+ ++E +++ +L H +++ Y
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 68 SAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSN 126
++++ EY G L++ LR+ ++ + ++ +D+ A++YL SK ++ DL N
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 135
Query: 127 ILLDENGRTKLCDFGLARKLSD-------ASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
L+++ G K+ DFGL+R + D SK P P PE+
Sbjct: 136 CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP-----------PEVLMYSKFS 184
Query: 180 SYASDLWGLGCVLYECYA-GRPPF 202
S SD+W G +++E Y+ G+ P+
Sbjct: 185 S-KSDIWAFGVLMWEIYSLGKMPY 207
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 32/201 (15%)
Query: 36 DKSQK--SKVLQEVRMLHSL-DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD-- 90
D ++K S ++ E+ M+ + H N++ L++++EY G+L LR
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 91 ---------NQLPED--SIRDLAQ---DLVRALQYLHSKGIIYCDLKPSNILLDENGRTK 136
N++PE+ + +DL L R ++YL S+ I+ DL N+L+ EN +
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMR 197
Query: 137 LCDFGLARKLSDAS---KAPSSMLPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVL 192
+ DFGLAR +++ K + LP +MAPE LF+ V+++ SD+W G ++
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVK------WMAPEALFDR--VYTHQSDVWSFGVLM 249
Query: 193 YECYA-GRPPFVGREFTQLVK 212
+E + G P+ G +L K
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK 270
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK--VLQEVRMLHSLDHPNVLRFYSWYET 67
+G G++ V G+ + + AIK + + S+ ++E +++ +L H +++ Y
Sbjct: 16 LGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 68 SAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSN 126
++++ EY G L++ LR+ ++ + ++ +D+ A++YL SK ++ DL N
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 134
Query: 127 ILLDENGRTKLCDFGLARKLSD-------ASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
L+++ G K+ DFGL+R + D SK P P PE+
Sbjct: 135 CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP-----------PEVLMYSKFS 183
Query: 180 SYASDLWGLGCVLYECYA-GRPPF 202
S SD+W G +++E Y+ G+ P+
Sbjct: 184 S-KSDIWAFGVLMWEIYSLGKMPY 206
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK--VLQEVRMLHSLDHPNVLRFYSWYET 67
+G G++ V G+ + + AIK + + S+ ++E +++ +L H +++ Y
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 68 SAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSN 126
++++ EY G L++ LR+ ++ + ++ +D+ A++YL SK ++ DL N
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 150
Query: 127 ILLDENGRTKLCDFGLARKLSD-------ASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
L+++ G K+ DFGL+R + D SK P P PE+
Sbjct: 151 CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP-----------PEVLMYSKFS 199
Query: 180 SYASDLWGLGCVLYECYA-GRPPF 202
S SD+W G +++E Y+ G+ P+
Sbjct: 200 S-KSDIWAFGVLMWEIYSLGKMPY 222
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 12/143 (8%)
Query: 73 LVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLD-E 131
LV EY D L + L + IR +L++AL Y HSKGI++ D+KP N+++D +
Sbjct: 117 LVFEYINNTDFKQLYQI---LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 173
Query: 132 NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCV 191
+ +L D+GLA A + + + + PEL + ++ Y+ D+W LGC+
Sbjct: 174 QKKLRLIDWGLAEFYHPAQEY------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 227
Query: 192 LYECYAGRPPFVGRE--FTQLVK 212
L R PF + + QLV+
Sbjct: 228 LASMIFRREPFFHGQDNYDQLVR 250
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 8 EAIGRGKYSTVYKG---RKKKTIEYFAIKSVDKSQKSK--VLQEVRMLHSLDHPNVLRFY 62
+ IG G++ V+ G K K AIK++ + S+ ++E ++ L HP +++ Y
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKV----AIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLY 88
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
A + LV E+ G L LR Q +++ + D+ + YL +I+ D
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 148
Query: 122 LKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPELFEEGGV 178
L N L+ EN K+ DFG+ R + D S+ GT + +PE+F
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-------GTKFPVKWASPEVF-SFSR 200
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
+S SD+W G +++E ++ G+ P+ R +++V+ I
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK--VLQEVRMLHSLDHPNVLRFYSWYET 67
+G G++ V G+ + + AIK + + S+ ++E +++ +L H +++ Y
Sbjct: 23 LGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 68 SAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSN 126
++++ EY G L++ LR+ ++ + ++ +D+ A++YL SK ++ DL N
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 141
Query: 127 ILLDENGRTKLCDFGLARKLSD-------ASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
L+++ G K+ DFGL+R + D SK P P PE+
Sbjct: 142 CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP-----------PEVLMYSKFS 190
Query: 180 SYASDLWGLGCVLYECYA-GRPPF 202
S SD+W G +++E Y+ G+ P+
Sbjct: 191 S-KSDIWAFGVLMWEIYSLGKMPY 213
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK--VLQEVRMLHSLDHPNVLRFYSWYET 67
+G G++ V G+ + + AIK + + S+ ++E +++ +L H +++ Y
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 68 SAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSN 126
++++ EY G L++ LR+ ++ + ++ +D+ A++YL SK ++ DL N
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 135
Query: 127 ILLDENGRTKLCDFGLARKLSD-------ASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
L+++ G K+ DFGL+R + D SK P P PE+
Sbjct: 136 CLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSP-----------PEVLMYSKFS 184
Query: 180 SYASDLWGLGCVLYECYA-GRPPF 202
S SD+W G +++E Y+ G+ P+
Sbjct: 185 S-KSDIWAFGVLMWEIYSLGKMPY 207
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 39/250 (15%)
Query: 43 VLQEVRML-HSLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIR-- 99
L E+++L S DHPNV+R+Y T L++ LE C +L L+ N + +++++
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKN-VSDENLKLQ 112
Query: 100 ------DLAQDLVRALQYLHSKGIIYCDLKPSNILLD-------------ENGRTKLCDF 140
L + + + +LHS II+ DLKP NIL+ EN R + DF
Sbjct: 113 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172
Query: 141 GLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG------VHSYASDLWGLGCVLYE 194
GL +KL + + L GT + APEL EE + + D++ +GCV Y
Sbjct: 173 GLCKKLDSGQSSFRTNL-NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYY 231
Query: 195 CYA-GRPPF---VGREFTQLVKSI--LXXXXXXXXXXXXXXFANLINSLLVKDPAQRLHW 248
+ G+ PF RE + +++ I L +LI+ ++ DP +R
Sbjct: 232 ILSKGKHPFGDKYSRE-SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 290
Query: 249 SDLCGHA-FW 257
+ H FW
Sbjct: 291 MKVLRHPLFW 300
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 8 EAIGRGKYSTVYKG---RKKKTIEYFAIKSVDKSQKSK--VLQEVRMLHSLDHPNVLRFY 62
+ IG G++ V+ G K K AIK++ + S+ ++E ++ L HP +++ Y
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKV----AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 66
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
A + LV E+ G L LR Q +++ + D+ + YL +I+ D
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 126
Query: 122 LKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPELFEEGGV 178
L N L+ EN K+ DFG+ R + D S+ GT + +PE+F
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-------GTKFPVKWASPEVF-SFSR 178
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
+S SD+W G +++E ++ G+ P+ R +++V+ I
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 8 EAIGRGKYSTVYKG---RKKKTIEYFAIKSVDKSQKSK--VLQEVRMLHSLDHPNVLRFY 62
+ IG G++ V+ G K K AIK++ + S+ ++E ++ L HP +++ Y
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKV----AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
A + LV E+ G L LR Q +++ + D+ + YL +I+ D
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 128
Query: 122 LKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPELFEEGGV 178
L N L+ EN K+ DFG+ R + D S+ GT + +PE+F
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-------GTKFPVKWASPEVF-SFSR 180
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
+S SD+W G +++E ++ G+ P+ R +++V+ I
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 32/201 (15%)
Query: 36 DKSQK--SKVLQEVRMLHSL-DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD-- 90
D ++K S ++ E+ M+ + H N++ L++++EY G+L LR
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 91 ---------NQLPED--SIRDLAQ---DLVRALQYLHSKGIIYCDLKPSNILLDENGRTK 136
N++PE+ + +DL L R ++YL S+ I+ DL N+L+ EN K
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 197
Query: 137 LCDFGLARKLSDAS---KAPSSMLPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVL 192
+ DFGLAR +++ + LP +MAPE LF+ V+++ SD+W G ++
Sbjct: 198 IADFGLARDINNIDYYKNTTNGRLPVK------WMAPEALFDR--VYTHQSDVWSFGVLM 249
Query: 193 YECYA-GRPPFVGREFTQLVK 212
+E + G P+ G +L K
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK 270
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSK--VLQEVRMLHSLDHPNVLRFYSWYET 67
+G G++ V G+ K + A+K + + S+ QE + + L HP +++FY
Sbjct: 16 LGSGQFGVVKLGKWKGQYD-VAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQ-LPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSN 126
+++V EY G L++ LR + L + ++ D+ + +L S I+ DL N
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARN 134
Query: 127 ILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPELFEEGGVHSYAS 183
L+D + K+ DFG+ R + D S GT + APE+F +S S
Sbjct: 135 CLVDRDLCVKVSDFGMTRYVLDDQYVSS-------VGTKFPVKWSAPEVFHYFK-YSSKS 186
Query: 184 DLWGLGCVLYECYA-GRPPF 202
D+W G +++E ++ G+ P+
Sbjct: 187 DVWAFGILMWEVFSLGKMPY 206
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 8 EAIGRGKYSTVYKG---RKKKTIEYFAIKSVDKSQKSK--VLQEVRMLHSLDHPNVLRFY 62
+ IG G++ V+ G K K AIK++ + S+ ++E ++ L HP +++ Y
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKV----AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 71
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
A + LV E+ G L LR Q +++ + D+ + YL +I+ D
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 131
Query: 122 LKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPELFEEGGV 178
L N L+ EN K+ DFG+ R + D S+ GT + +PE+F
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-------GTKFPVKWASPEVF-SFSR 183
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
+S SD+W G +++E ++ G+ P+ R +++V+ I
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHS--LDHPNVLRFYSWY 65
E+IG+G++ V++G+ + E A+K ++ +E + + L H N+L F +
Sbjct: 48 ESIGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 66 E----TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK------ 115
T LWLV +Y G L L + E I+ LA L +LH +
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK-LALSTASGLAHLHMEIVGTQG 164
Query: 116 --GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
I + DLK NIL+ +NG + D GLA + D++ + P + GT YMAPE+
Sbjct: 165 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVR-HDSATDTIDIAPNHRVGTKRYMAPEVL 223
Query: 174 EEG----GVHSYA-SDLWGLGCVLYE 194
++ S+ +D++ +G V +E
Sbjct: 224 DDSINMKHFESFKRADIYAMGLVFWE 249
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRM--LHSLDHPNVLRFYSWYET 67
IG G + VYKG + + + +S + E + L HP+++ + +
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIR-----DLAQDLVRALQYLHSKGIIYCDL 122
+ L+ +Y G+L L + LP S+ ++ R L YLH++ II+ D+
Sbjct: 107 RNEMILIYKYMENGNLKRHL-YGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDV 165
Query: 123 KPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA 182
K NILLDEN K+ DFG+++K ++ + L GT Y+ PE F +G + +
Sbjct: 166 KSINILLDENFVPKITDFGISKK---GTELDQTHLXXVVKGTLGYIDPEYFIKGRL-TEK 221
Query: 183 SDLWGLGCVLYECYAGRPPFV 203
SD++ G VL+E R V
Sbjct: 222 SDVYSFGVVLFEVLCARSAIV 242
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G + I+ A+K+V++S ++ + L E ++ +V+R
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLR-------QDNQLPEDSIRDLAQ---DLVRALQ 110
+V+E GDL S LR + P +++++ Q ++ +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++K ++ DL N ++ + K+ DFG+ R + + K +LP +
Sbjct: 142 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR------W 195
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
MAPE ++ GV + +SD+W G VL+E + P+ G Q++K ++
Sbjct: 196 MAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 243
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWY 65
E +G G++ V+ G + A+KS+ + S L E ++ L H ++R Y+
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 78
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
T ++++ EY G L+ L+ + +L + + D+A + + ++ + I+ DL+
Sbjct: 79 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 138
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPELFEEGGVHS 180
+NIL+ + K+ DFGLAR + D A+ G + APE G +
Sbjct: 139 AANILVSDTLSCKIADFGLARLIEDNEXT-------AREGAKFPIKWTAPEAINY-GTFT 190
Query: 181 YASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
SD+W G +L E GR P+ G ++++++
Sbjct: 191 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 225
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Query: 34 SVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQL 93
S D +++ +E R L P+V+ + + E L++ G DL + LR+ L
Sbjct: 72 SSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPL 131
Query: 94 PEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAP 153
+ + + AL H+ G + D+KP NIL+ + L DFG+A +D
Sbjct: 132 APPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK--- 188
Query: 154 SSMLPQA--KCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFT 208
L Q GT Y APE F E +Y +D++ L CVLYEC G PP+ G + +
Sbjct: 189 ---LTQLGNTVGTLYYXAPERFSESHA-TYRADIYALTCVLYECLTGSPPYQGDQLS 241
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWY 65
E +G G++ V+ G + A+KS+ + S L E ++ L H ++R Y+
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 85
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
T ++++ EY G L+ L+ + +L + + D+A + + ++ + I+ DL+
Sbjct: 86 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 145
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPELFEEGGVHS 180
+NIL+ + K+ DFGLAR + D A+ G + APE G +
Sbjct: 146 AANILVSDTLSCKIADFGLARLIEDNEXT-------AREGAKFPIKWTAPEAINY-GTFT 197
Query: 181 YASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
SD+W G +L E GR P+ G ++++++
Sbjct: 198 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 232
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWY 65
E +G G++ V+ G + A+KS+ + S L E ++ L H ++R Y+
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 77
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
T ++++ EY G L+ L+ + +L + + D+A + + ++ + I+ DL+
Sbjct: 78 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 137
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPELFEEGGVHS 180
+NIL+ + K+ DFGLAR + D A+ G + APE G +
Sbjct: 138 AANILVSDTLSCKIADFGLARLIEDNEXT-------AREGAKFPIKWTAPEAINY-GTFT 189
Query: 181 YASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
SD+W G +L E GR P+ G ++++++
Sbjct: 190 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 224
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 98/237 (41%), Gaps = 31/237 (13%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYF--AIKSV----DKSQKSKVLQEVRMLHSL-D 54
N + IG G + V K R KK AIK + K E+ +L L
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 55 HPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED----------------SI 98
HPN++ E +L+L +EY G+L+ LR+ L D +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 99 RDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLP 158
A D+ R + YL K I+ +L NIL+ EN K+ DFGL+R K LP
Sbjct: 142 LHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 201
Query: 159 QAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
+MA E V++ SD+W G +L+E + G P+ G +L + +
Sbjct: 202 VR------WMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 251
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWY 65
E +G G++ V+ G + A+KS+ + S L E ++ L H ++R Y+
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 76
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
T ++++ EY G L+ L+ + +L + + D+A + + ++ + I+ DL+
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 136
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPELFEEGGVHS 180
+NIL+ + K+ DFGLAR + D A+ G + APE G +
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEXT-------AREGAKFPIKWTAPEAINY-GTFT 188
Query: 181 YASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
SD+W G +L E GR P+ G ++++++
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 32/201 (15%)
Query: 36 DKSQK--SKVLQEVRMLHSL-DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD-- 90
D ++K S ++ E+ M+ + H N++ L++++ Y G+L LR
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRP 137
Query: 91 ---------NQLPED--SIRDLAQ---DLVRALQYLHSKGIIYCDLKPSNILLDENGRTK 136
N++PE+ + +DL L R ++YL S+ I+ DL N+L+ EN K
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 197
Query: 137 LCDFGLARKLSDAS---KAPSSMLPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVL 192
+ DFGLAR +++ K + LP +MAPE LF+ V+++ SD+W G ++
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVK------WMAPEALFDR--VYTHQSDVWSFGVLM 249
Query: 193 YECYA-GRPPFVGREFTQLVK 212
+E + G P+ G +L K
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK 270
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHS--LDHPNVLRFYSWY 65
E+IG+G++ V++G+ + E A+K ++ +E + + L H N+L F +
Sbjct: 35 ESIGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 66 E----TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK------ 115
T LWLV +Y G L L + E I+ LA L +LH +
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK-LALSTASGLAHLHMEIVGTQG 151
Query: 116 --GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
I + DLK NIL+ +NG + D GLA + D++ + P + GT YMAPE+
Sbjct: 152 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVR-HDSATDTIDIAPNHRVGTKRYMAPEVL 210
Query: 174 EEG----GVHSYA-SDLWGLGCVLYE 194
++ S+ +D++ +G V +E
Sbjct: 211 DDSINMKHFESFKRADIYAMGLVFWE 236
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 85/200 (42%), Gaps = 17/200 (8%)
Query: 11 GRGKYSTVYKGRKKKTIEYFAIKS----VDKSQ---KSKVLQEVRMLHSLDHPNVLRFYS 63
G G + VYKG T A+K VD + K + QE+++ H N++
Sbjct: 31 GEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIR---DLAQDLVRALQYLHSKGIIYC 120
+ L LV Y G L+ L + P S +AQ + +LH I+
Sbjct: 89 FSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHR 148
Query: 121 DLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHS 180
D+K +NILLDE K+ DFGLAR + K + GT Y APE G +
Sbjct: 149 DIKSANILLDEAFTAKISDFGLARA---SEKFAQXVXXSRIVGTTAYXAPEALR--GEIT 203
Query: 181 YASDLWGLGCVLYECYAGRP 200
SD++ G VL E G P
Sbjct: 204 PKSDIYSFGVVLLEIITGLP 223
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 102/213 (47%), Gaps = 14/213 (6%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWY 65
E +G G++ V+ G + A+KS+ + S L E ++ L H ++R Y+
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 71
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
T ++++ EY G L+ L+ + +L + + D+A + + ++ + I+ DL+
Sbjct: 72 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 131
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEEGGVHSYA 182
+NIL+ + K+ DFGLAR + D + + P + APE G +
Sbjct: 132 AANILVSDTLSCKIADFGLARLIED-----NEYTAREGAKFPIKWTAPEAINY-GTFTIK 185
Query: 183 SDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
SD+W G +L E GR P+ G ++++++
Sbjct: 186 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 218
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G + I+ A+K+V++S ++ + L E ++ +V+R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLR-------QDNQLPEDSIRDLAQ---DLVRALQ 110
+V+E GDL S LR + P +++++ Q ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++K ++ DL N ++ + K+ DFG+ R + + K +LP +
Sbjct: 145 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR------W 198
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
MAPE ++ GV + +SD+W G VL+E + P+ G Q++K ++
Sbjct: 199 MAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRM--LHSLDHPNVLRFYSWYET 67
IG G + VYKG + + + +S + E + L HP+++ + +
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIR-----DLAQDLVRALQYLHSKGIIYCDL 122
+ L+ +Y G+L L + LP S+ ++ R L YLH++ II+ D+
Sbjct: 107 RNEMILIYKYMENGNLKRHL-YGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDV 165
Query: 123 KPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA 182
K NILLDEN K+ DFG+++K ++ + L GT Y+ PE F +G + +
Sbjct: 166 KSINILLDENFVPKITDFGISKK---GTELGQTHLXXVVKGTLGYIDPEYFIKGRL-TEK 221
Query: 183 SDLWGLGCVLYECYAGRPPFV 203
SD++ G VL+E R V
Sbjct: 222 SDVYSFGVVLFEVLCARSAIV 242
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWY 65
E +G G+ V+ G + A+KS+ + S L E ++ L H ++R Y+
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 76
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
T ++++ EY G L+ L+ + +L + + D+A + + ++ + I+ DL+
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 136
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPELFEEGGVHS 180
+NIL+ + K+ DFGLAR + DA A+ G + APE G +
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDAEXT-------AREGAKFPIKWTAPEAINY-GTFT 188
Query: 181 YASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
SD+W G +L E GR P+ G ++++++
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHS--LDHPNVLRFYSWY 65
E+IG+G++ V++G+ + E A+K ++ +E + + L H N+L F +
Sbjct: 15 ESIGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 66 E----TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK------ 115
T LWLV +Y G L L + E I+ LA L +LH +
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK-LALSTASGLAHLHMEIVGTQG 131
Query: 116 --GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
I + DLK NIL+ +NG + D GLA + D++ + P + GT YMAPE+
Sbjct: 132 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVR-HDSATDTIDIAPNHRVGTKRYMAPEVL 190
Query: 174 EEG----GVHSYA-SDLWGLGCVLYE 194
++ S+ +D++ +G V +E
Sbjct: 191 DDSINMKHFESFKRADIYAMGLVFWE 216
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHS--LDHPNVLRFYSWY 65
E+IG+G++ V++G+ + E A+K ++ +E + + L H N+L F +
Sbjct: 12 ESIGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 66 E----TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK------ 115
T LWLV +Y G L L + E I+ LA L +LH +
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK-LALSTASGLAHLHMEIVGTQG 128
Query: 116 --GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
I + DLK NIL+ +NG + D GLA + D++ + P + GT YMAPE+
Sbjct: 129 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVR-HDSATDTIDIAPNHRVGTKRYMAPEVL 187
Query: 174 EEG----GVHSYA-SDLWGLGCVLYE 194
++ S+ +D++ +G V +E
Sbjct: 188 DDSINMKHFESFKRADIYAMGLVFWE 213
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWY 65
E +G G++ V+ G + A+KS+ + S L E ++ L H ++R Y+
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 84
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
T ++++ EY G L+ L+ + +L + + D+A + + ++ + I+ DL+
Sbjct: 85 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 144
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPELFEEGGVHS 180
+NIL+ + K+ DFGLAR + D A+ G + APE G +
Sbjct: 145 AANILVSDTLSCKIADFGLARLIEDNEXT-------AREGAKFPIKWTAPEAINY-GTFT 196
Query: 181 YASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
SD+W G +L E GR P+ G ++++++
Sbjct: 197 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 231
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHS--LDHPNVLRFYSWY 65
E+IG+G++ V++G+ + E A+K ++ +E + + L H N+L F +
Sbjct: 10 ESIGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 66 E----TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK------ 115
T LWLV +Y G L L + E I+ LA L +LH +
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK-LALSTASGLAHLHMEIVGTQG 126
Query: 116 --GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
I + DLK NIL+ +NG + D GLA + D++ + P + GT YMAPE+
Sbjct: 127 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVR-HDSATDTIDIAPNHRVGTKRYMAPEVL 185
Query: 174 EEG----GVHSYA-SDLWGLGCVLYE 194
++ S+ +D++ +G V +E
Sbjct: 186 DDSINMKHFESFKRADIYAMGLVFWE 211
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHS--LDHPNVLRFYSWY 65
E+IG+G++ V++G+ + E A+K ++ +E + + L H N+L F +
Sbjct: 9 ESIGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 66 E----TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK------ 115
T LWLV +Y G L L + E I+ LA L +LH +
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK-LALSTASGLAHLHMEIVGTQG 125
Query: 116 --GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
I + DLK NIL+ +NG + D GLA + D++ + P + GT YMAPE+
Sbjct: 126 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVR-HDSATDTIDIAPNHRVGTKRYMAPEVL 184
Query: 174 EEG----GVHSYA-SDLWGLGCVLYE 194
++ S+ +D++ +G V +E
Sbjct: 185 DDSINMKHFESFKRADIYAMGLVFWE 210
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G + I+ A+K+V++S ++ + L E ++ +V+R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLR-------QDNQLPEDSIRDLAQ---DLVRALQ 110
+V+E GDL S LR + P +++++ Q ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++K ++ DL N ++ + K+ DFG+ R + + K +LP +
Sbjct: 145 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR------W 198
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
MAPE ++ GV + +SD+W G VL+E + P+ G Q++K ++
Sbjct: 199 MAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWY 65
E +G G++ V+ G + A+KS+ + S L E ++ L H ++R Y+
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 82
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
T ++++ EY G L+ L+ + +L + + D+A + + ++ + I+ DL+
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 142
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPELFEEGGVHS 180
+NIL+ + K+ DFGLAR + D A+ G + APE G +
Sbjct: 143 AANILVSDTLSCKIADFGLARLIEDNEXT-------AREGAKFPIKWTAPEAINY-GTFT 194
Query: 181 YASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
SD+W G +L E GR P+ G ++++++
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWY 65
E +G G++ V+ G + A+KS+ + S L E ++ L H ++R Y+
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 76
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
T ++++ EY G L+ L+ + +L + + D+A + + ++ + I+ DL+
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 136
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPELFEEGGVHS 180
+NIL+ + K+ DFGLAR + D A+ G + APE G +
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEXT-------AREGAKFPIKWTAPEAINY-GTFT 188
Query: 181 YASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
SD+W G +L E GR P+ G ++++++
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 102/213 (47%), Gaps = 14/213 (6%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWY 65
E +G G++ V+ G + A+KS+ + S L E ++ L H ++R Y+
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 82
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
T ++++ EY G L+ L+ + +L + + D+A + + ++ + I+ DL+
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 142
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEEGGVHSYA 182
+NIL+ + K+ DFGLAR + D + + P + APE G +
Sbjct: 143 AANILVSDTLSCKIADFGLARLIED-----NEYTAREGAKFPIKWTAPEAINY-GTFTIK 196
Query: 183 SDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
SD+W G +L E GR P+ G ++++++
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 37/225 (16%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHS--LDHPNVL 59
Q + + IG+G+Y V+ G+ + E A+K ++++ +E + + + H N+L
Sbjct: 37 KQIQMVKQIGKGRYGEVWMGKWRG--EKVAVKVFFTTEEASWFRETEIYQTVLMRHENIL 94
Query: 60 RFY--------SWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQY 111
F SW L+L+ +Y G L L+ L S+ LA V L +
Sbjct: 95 GFIAADIKGTGSW----TQLYLITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGLCH 149
Query: 112 LHSK--------GIIYCDLKPSNILLDENGRTKLCDFGLARK-LSDASKAPSSMLPQAKC 162
LH++ I + DLK NIL+ +NG + D GLA K +SD ++ + P +
Sbjct: 150 LHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEV--DIPPNTRV 207
Query: 163 GTPCYMAPELFEE----GGVHSY-ASDLWGLGCVLYE----CYAG 198
GT YM PE+ +E SY +D++ G +L+E C +G
Sbjct: 208 GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSG 252
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 102/213 (47%), Gaps = 14/213 (6%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWY 65
E +G G++ V+ G + A+KS+ + S L E ++ L H ++R Y+
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 81
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
T ++++ EY G L+ L+ + +L + + D+A + + ++ + I+ DL+
Sbjct: 82 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 141
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEEGGVHSYA 182
+NIL+ + K+ DFGLAR + D + + P + APE G +
Sbjct: 142 AANILVSDTLSCKIADFGLARLIED-----NEYTAREGAKFPIKWTAPEAINY-GTFTIK 195
Query: 183 SDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
SD+W G +L E GR P+ G ++++++
Sbjct: 196 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 228
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 29/211 (13%)
Query: 9 AIGRGKYSTVYKGR-----KKKTIEYFAIKSVDK--SQKSKV--LQEVRMLHSLDHPNVL 59
+G G + VY+G+ + A+K++ + S++ ++ L E ++ L+H N++
Sbjct: 38 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIV 97
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED----SIRDL---AQDLVRALQYL 112
R S +++LE GGDL S LR+ P ++ DL A+D+ QYL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 113 HSKGIIYCDLKPSNILLDENGR---TKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPC 166
I+ D+ N LL G K+ DFG+AR + AS K +MLP
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------ 211
Query: 167 YMAPELFEEGGVHSYASDLWGLGCVLYECYA 197
+M PE F E G+ + +D W G +L+E ++
Sbjct: 212 WMPPEAFME-GIFTSKTDTWSFGVLLWEIFS 241
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 115/238 (48%), Gaps = 43/238 (18%)
Query: 10 IGRGKYSTVYKGR-----KKKTIEYFAIKSVDK----SQKSKVLQEVRML-HSLDHPNVL 59
+GRG + V + K T A+K + + S+ ++ E+++L H H NV+
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 60 RFY-SWYETSAHLWLVLEYCVGGDLMSLLR--QDNQLPEDSIRDLAQDLV---------- 106
+ + L +++E+C G+L + LR ++ +P + DL +D +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 107 ---RALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLS---DASKAPSSMLPQA 160
+ +++L S+ I+ DL NILL E K+CDFGLAR + D + + LP
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 161 KCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG----REFTQLVK 212
+MAPE +F+ V++ SD+W G +L+E ++ G P+ G EF + +K
Sbjct: 216 ------WMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 102/213 (47%), Gaps = 14/213 (6%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWY 65
E +G G++ V+ G + A+KS+ + S L E ++ L H ++R Y+
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 76
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
T ++++ EY G L+ L+ + +L + + D+A + + ++ + I+ DL+
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 136
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEEGGVHSYA 182
+NIL+ + K+ DFGLAR + D + + P + APE G +
Sbjct: 137 AANILVSDTLSCKIADFGLARLIED-----NEYTAREGAKFPIKWTAPEAINY-GTFTIK 190
Query: 183 SDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
SD+W G +L E GR P+ G ++++++
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 38/225 (16%)
Query: 10 IGRGKYSTVYKGR-----KKKTIEYFAIKSVDK----SQKSKVLQEVRML-HSLDHPNVL 59
+GRG + V + K T A+K + + S+ ++ E+++L H H NV+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 60 RFY-SWYETSAHLWLVLEYCVGGDLMSLLR-QDNQL----PEDSIRDL---------AQD 104
+ + L +++E+C G+L + LR + N+ PED +D +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 105 LVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLS---DASKAPSSMLPQAK 161
+ + +++L S+ I+ DL NILL E K+CDFGLAR + D + + LP
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK- 215
Query: 162 CGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG 204
+MAPE +F+ V++ SD+W G +L+E ++ G P+ G
Sbjct: 216 -----WMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 32/201 (15%)
Query: 36 DKSQK--SKVLQEVRMLHSL-DHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD-- 90
D ++K S ++ E+ M+ + H N++ L++++ Y G+L LR
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRP 137
Query: 91 ---------NQLPED--SIRDLAQ---DLVRALQYLHSKGIIYCDLKPSNILLDENGRTK 136
N++PE+ + +DL L R ++YL S+ I+ DL N+L+ EN K
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 197
Query: 137 LCDFGLARKLSDAS---KAPSSMLPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVL 192
+ DFGLAR +++ K + LP +MAPE LF+ V+++ SD+W G ++
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVK------WMAPEALFDR--VYTHQSDVWSFGVLM 249
Query: 193 YECYA-GRPPFVGREFTQLVK 212
+E + G P+ G +L K
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK 270
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 29/211 (13%)
Query: 9 AIGRGKYSTVYKGR-----KKKTIEYFAIKSVDK--SQKSKV--LQEVRMLHSLDHPNVL 59
+G G + VY+G+ + A+K++ + S++ ++ L E ++ L+H N++
Sbjct: 52 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIV 111
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED----SIRDL---AQDLVRALQYL 112
R S +++LE GGDL S LR+ P ++ DL A+D+ QYL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 113 HSKGIIYCDLKPSNILLDENGR---TKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPC 166
I+ D+ N LL G K+ DFG+AR + AS K +MLP
Sbjct: 172 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------ 225
Query: 167 YMAPELFEEGGVHSYASDLWGLGCVLYECYA 197
+M PE F E G+ + +D W G +L+E ++
Sbjct: 226 WMPPEAFME-GIFTSKTDTWSFGVLLWEIFS 255
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 93/203 (45%), Gaps = 15/203 (7%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQ---EVRMLHSLDHPNVLRFYSWYE 66
+GRG + VYKGR + ++ + LQ EV M+ H N+LR +
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97
Query: 67 TSAHLWLVLEYCVGGDLMSLLRQ--DNQLPED--SIRDLAQDLVRALQYLHSK---GIIY 119
T LV Y G + S LR+ ++Q P D + +A R L YLH II+
Sbjct: 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIH 157
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVH 179
D+K +NILLDE + DFGLA KL D + A G ++APE G
Sbjct: 158 RDVKAANILLDEEFEAVVGDFGLA-KLMDYK---DXHVXXAVRGXIGHIAPEYLSTGK-S 212
Query: 180 SYASDLWGLGCVLYECYAGRPPF 202
S +D++G G +L E G+ F
Sbjct: 213 SEKTDVFGYGVMLLELITGQRAF 235
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 8 EAIGRGKYSTVYKG---RKKKTIEYFAIKSVDKSQKSK--VLQEVRMLHSLDHPNVLRFY 62
+ IG G++ V+ G K K AIK++ + S+ ++E ++ L HP +++ Y
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKV----AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 69
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
A + LV E+ G L LR Q +++ + D+ + YL +I+ D
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 129
Query: 122 LKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPELFEEGGV 178
L N L+ EN K+ DFG+ R + D S+ GT + +PE+F
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-------GTKFPVKWASPEVF-SFSR 181
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
+S SD+W G +++E ++ G+ P+ R +++V+ I
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 113/249 (45%), Gaps = 39/249 (15%)
Query: 44 LQEVRML-HSLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIR--- 99
L E+++L S DHPNV+R+Y T L++ LE C +L L+ N + +++++
Sbjct: 56 LMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKN-VSDENLKLQK 113
Query: 100 -----DLAQDLVRALQYLHSKGIIYCDLKPSNILLD-------------ENGRTKLCDFG 141
L + + + +LHS II+ DLKP NIL+ EN R + DFG
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 142 LARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG------VHSYASDLWGLGCVLYEC 195
L +KL D+ + GT + APEL EE + + D++ +GCV Y
Sbjct: 174 LCKKL-DSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 196 YA-GRPPF---VGREFTQLVKSI--LXXXXXXXXXXXXXXFANLINSLLVKDPAQRLHWS 249
+ G+ PF RE + +++ I L +LI+ ++ DP +R
Sbjct: 233 LSKGKHPFGDKYSRE-SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAM 291
Query: 250 DLCGHA-FW 257
+ H FW
Sbjct: 292 KVLRHPLFW 300
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWY 65
E +G G++ V+ G + A+KS+ + S L E ++ L H ++R Y+
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 86
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
T ++++ EY G L+ L+ + +L + + D+A + + ++ + I+ DL+
Sbjct: 87 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 146
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPELFEEGGVHS 180
+NIL+ + K+ DFGLAR + D A+ G + APE G +
Sbjct: 147 AANILVSDTLSCKIADFGLARLIEDNEYT-------AREGAKFPIKWTAPEAINY-GTFT 198
Query: 181 YASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
SD+W G +L E GR P+ G ++++++
Sbjct: 199 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 233
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 71.2 bits (173), Expect = 4e-12, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL-DHPNVLR 60
+ Y + +GRGKYS V++ E A+K + +K K+ +E+++L +L PN++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 61 FYSWYE--TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S LV E+ D L + L + IR ++++AL Y HS GI+
Sbjct: 97 LADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIM 153
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+L+D E+ + +L D+GLA + + + + PEL +
Sbjct: 154 HRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEY------NVRVASRYFKGPELLVDYQ 207
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFV-GRE-FTQLVK 212
++ Y+ D+W LGC+L + PF G + + QLV+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 109/229 (47%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G + I+ A+K+V++S ++ + L E ++ +V+R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLR-------QDNQLPEDSIRDLAQ---DLVRALQ 110
+V+E GDL S LR + P +++++ Q ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++K ++ DL N ++ + K+ DFG+ R + + + K +LP +
Sbjct: 145 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR------W 198
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
MAPE ++ GV + +SD+W G VL+E + P+ G Q++K ++
Sbjct: 199 MAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G + I+ A+K+V++S ++ + L E ++ +V+R
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLR-------QDNQLPEDSIRDLAQ---DLVRALQ 110
+V+E GDL S LR + P +++++ Q ++ +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++K ++ DL N ++ + K+ DFG+ R + + K +LP +
Sbjct: 144 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------W 197
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
MAPE ++ GV + +SD+W G VL+E + P+ G Q++K ++
Sbjct: 198 MAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 245
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 8 EAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKVL---QEVRMLHSLDHPNVLR 60
+ +G+G + +V Y + T E A+K + S + + +E+ +L SL H N+++
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 61 FYS--WYETSAHLWLVLEYCVGGDLMSLLRQDNQ-LPEDSIRDLAQDLVRALQYLHSKGI 117
+ + +L L++EY G L L++ + + + + + ++YL +K
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELFEEG 176
I+ DL NIL++ R K+ DFGL + L + P +P + APE E
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE---SPIFWYAPESLTES 210
Query: 177 GVHSYASDLWGLGCVLYECYA 197
S ASD+W G VLYE +
Sbjct: 211 KF-SVASDVWSFGVVLYELFT 230
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 40/227 (17%)
Query: 10 IGRGKYSTVYKGR-----KKKTIEYFAIKSVDK----SQKSKVLQEVRML-HSLDHPNVL 59
+GRG + V + K T A+K + + S+ ++ E+++L H H NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 60 RFY-SWYETSAHLWLVLEYCVGGDLMSLLR-QDNQL------PEDSIRDL---------A 102
+ + L +++E+C G+L + LR + N+ PED +D +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 103 QDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLS---DASKAPSSMLPQ 159
+ + +++L S+ I+ DL NILL E K+CDFGLAR + D + + LP
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 160 AKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG 204
+MAPE +F+ V++ SD+W G +L+E ++ G P+ G
Sbjct: 206 K------WMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 8 EAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKVL---QEVRMLHSLDHPNVLR 60
+ +G+G + +V Y + T E A+K + S + + +E+ +L SL H N+++
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 61 FYS--WYETSAHLWLVLEYCVGGDLMSLLRQDNQ-LPEDSIRDLAQDLVRALQYLHSKGI 117
+ + +L L++EY G L L++ + + + + + ++YL +K
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 139
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELFEEG 176
I+ DL NIL++ R K+ DFGL + L + P +P + APE E
Sbjct: 140 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE---SPIFWYAPESLTES 196
Query: 177 GVHSYASDLWGLGCVLYECYA 197
S ASD+W G VLYE +
Sbjct: 197 KF-SVASDVWSFGVVLYELFT 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 8 EAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKVL---QEVRMLHSLDHPNVLR 60
+ +G+G + +V Y + T E A+K + S + + +E+ +L SL H N+++
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 61 FYS--WYETSAHLWLVLEYCVGGDLMSLLRQDNQ-LPEDSIRDLAQDLVRALQYLHSKGI 117
+ + +L L++EY G L L++ + + + + + ++YL +K
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELFEEG 176
I+ DL NIL++ R K+ DFGL + L + P +P + APE E
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE---SPIFWYAPESLTES 192
Query: 177 GVHSYASDLWGLGCVLYECYA 197
S ASD+W G VLYE +
Sbjct: 193 KF-SVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 8 EAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKVL---QEVRMLHSLDHPNVLR 60
+ +G+G + +V Y + T E A+K + S + + +E+ +L SL H N+++
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 61 FYS--WYETSAHLWLVLEYCVGGDLMSLLRQDNQ-LPEDSIRDLAQDLVRALQYLHSKGI 117
+ + +L L++EY G L L++ + + + + + ++YL +K
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELFEEG 176
I+ DL NIL++ R K+ DFGL + L + P +P + APE E
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE---SPIFWYAPESLTES 210
Query: 177 GVHSYASDLWGLGCVLYECYA 197
S ASD+W G VLYE +
Sbjct: 211 KF-SVASDVWSFGVVLYELFT 230
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 9 AIGRGKYSTVYKGR-----KKKTIEYFAIKSVDK--SQKSKV--LQEVRMLHSLDHPNVL 59
+G G + VY+G+ + A+K++ + S++ ++ L E ++ +H N++
Sbjct: 37 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 96
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED----SIRDL---AQDLVRALQYL 112
R S +++LE GGDL S LR+ P ++ DL A+D+ QYL
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 113 HSKGIIYCDLKPSNILLDENGR---TKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPC 166
I+ D+ N LL G K+ DFG+AR + AS K +MLP
Sbjct: 157 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------ 210
Query: 167 YMAPELFEEGGVHSYASDLWGLGCVLYECYA 197
+M PE F E G+ + +D W G +L+E ++
Sbjct: 211 WMPPEAFME-GIFTSKTDTWSFGVLLWEIFS 240
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 44/239 (18%)
Query: 10 IGRGKYSTVYKGR-----KKKTIEYFAIKSVDK----SQKSKVLQEVRML-HSLDHPNVL 59
+GRG + V + K T A+K + + S+ ++ E+++L H H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 60 RFY-SWYETSAHLWLVLEYCVGGDLMSLLR-QDNQL------PEDSIRDL---------A 102
+ + L +++E+C G+L + LR + N+ PED +D +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 103 QDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLS---DASKAPSSMLPQ 159
+ + +++L S+ I+ DL NILL E K+CDFGLAR + D + + LP
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 160 AKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG----REFTQLVK 212
+MAPE +F+ V++ SD+W G +L+E ++ G P+ G EF + +K
Sbjct: 215 K------WMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 8 EAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKVL---QEVRMLHSLDHPNVLR 60
+ +G+G + +V Y + T E A+K + S + + +E+ +L SL H N+++
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 61 FYS--WYETSAHLWLVLEYCVGGDLMSLLRQDNQ-LPEDSIRDLAQDLVRALQYLHSKGI 117
+ + +L L++EY G L L++ + + + + + ++YL +K
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 166
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELFEEG 176
I+ DL NIL++ R K+ DFGL + L + P +P + APE E
Sbjct: 167 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE---SPIFWYAPESLTES 223
Query: 177 GVHSYASDLWGLGCVLYECYA 197
S ASD+W G VLYE +
Sbjct: 224 KF-SVASDVWSFGVVLYELFT 243
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G + I+ A+K+V++S ++ + L E ++ +V+R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLR-------QDNQLPEDSIRDLAQ---DLVRALQ 110
+V+E GDL S LR + P +++++ Q ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++K ++ DL N ++ + K+ DFG+ R + + K +LP +
Sbjct: 145 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------W 198
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
MAPE ++ GV + +SD+W G VL+E + P+ G Q++K ++
Sbjct: 199 MAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHS--LDHPNVLR 60
Q + E +G+G+Y V++G + E A+K + +E + ++ L H N+L
Sbjct: 38 QITLLECVGKGRYGEVWRGSWQG--ENVAVKIFSSRDEKSWFRETELYNTVMLRHENILG 95
Query: 61 FYSWYETSAH----LWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK- 115
F + TS H LWL+ Y G L L Q L S + + L +LH +
Sbjct: 96 FIASDMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 116 -------GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
I + DLK NIL+ +NG+ + D GLA + S + + GT YM
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 169 APELFEEG-GVHSYAS----DLWGLGCVLYE 194
APE+ +E V + S D+W G VL+E
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWE 244
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 8 EAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKVL---QEVRMLHSLDHPNVLR 60
+ +G+G + +V Y + T E A+K + S + + +E+ +L SL H N+++
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 61 FYS--WYETSAHLWLVLEYCVGGDLMSLLRQDNQ-LPEDSIRDLAQDLVRALQYLHSKGI 117
+ + +L L++EY G L L++ + + + + + ++YL +K
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 140
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELFEEG 176
I+ DL NIL++ R K+ DFGL + L + P +P + APE E
Sbjct: 141 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE---SPIFWYAPESLTES 197
Query: 177 GVHSYASDLWGLGCVLYECYA 197
S ASD+W G VLYE +
Sbjct: 198 KF-SVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 8 EAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKVL---QEVRMLHSLDHPNVLR 60
+ +G+G + +V Y + T E A+K + S + + +E+ +L SL H N+++
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 61 FYS--WYETSAHLWLVLEYCVGGDLMSLLRQDNQ-LPEDSIRDLAQDLVRALQYLHSKGI 117
+ + +L L++EY G L L++ + + + + + ++YL +K
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELFEEG 176
I+ DL NIL++ R K+ DFGL + L + P +P + APE E
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE---SPIFWYAPESLTES 195
Query: 177 GVHSYASDLWGLGCVLYECYA 197
S ASD+W G VLYE +
Sbjct: 196 KF-SVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 8 EAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKVL---QEVRMLHSLDHPNVLR 60
+ +G+G + +V Y + T E A+K + S + + +E+ +L SL H N+++
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 61 FYS--WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDL--AQDLVRALQYLHSKG 116
+ + +L L++EY G L L Q ++ D I+ L + + ++YL +K
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 117 IIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELFEE 175
I+ DL NIL++ R K+ DFGL + L + P +P + APE E
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE---SPIFWYAPESLTE 191
Query: 176 GGVHSYASDLWGLGCVLYECYA 197
S ASD+W G VLYE +
Sbjct: 192 SKF-SVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 8 EAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKVL---QEVRMLHSLDHPNVLR 60
+ +G+G + +V Y + T E A+K + S + + +E+ +L SL H N+++
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 61 FYS--WYETSAHLWLVLEYCVGGDLMSLLRQDNQ-LPEDSIRDLAQDLVRALQYLHSKGI 117
+ + +L L++EY G L L++ + + + + + ++YL +K
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 141
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELFEEG 176
I+ DL NIL++ R K+ DFGL + L + P +P + APE E
Sbjct: 142 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE---SPIFWYAPESLTES 198
Query: 177 GVHSYASDLWGLGCVLYECYA 197
S ASD+W G VLYE +
Sbjct: 199 KF-SVASDVWSFGVVLYELFT 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 8 EAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKVL---QEVRMLHSLDHPNVLR 60
+ +G+G + +V Y + T E A+K + S + + +E+ +L SL H N+++
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 61 FYS--WYETSAHLWLVLEYCVGGDLMSLLRQDNQ-LPEDSIRDLAQDLVRALQYLHSKGI 117
+ + +L L++EY G L L++ + + + + + ++YL +K
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 134
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELFEEG 176
I+ DL NIL++ R K+ DFGL + L + P +P + APE E
Sbjct: 135 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE---SPIFWYAPESLTES 191
Query: 177 GVHSYASDLWGLGCVLYECYA 197
S ASD+W G VLYE +
Sbjct: 192 KF-SVASDVWSFGVVLYELFT 211
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 8 EAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKVL---QEVRMLHSLDHPNVLR 60
+ +G+G + +V Y + T E A+K + S + + +E+ +L SL H N+++
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 61 FYS--WYETSAHLWLVLEYCVGGDLMSLLRQDNQ-LPEDSIRDLAQDLVRALQYLHSKGI 117
+ + +L L++EY G L L++ + + + + + ++YL +K
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 142
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELFEEG 176
I+ DL NIL++ R K+ DFGL + L + P +P + APE E
Sbjct: 143 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE---SPIFWYAPESLTES 199
Query: 177 GVHSYASDLWGLGCVLYECYA 197
S ASD+W G VLYE +
Sbjct: 200 KF-SVASDVWSFGVVLYELFT 219
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHS--LDHPNVL 59
+Q + E +G+G+Y V++G + E A+K + +E + ++ L H N+L
Sbjct: 8 HQITLLECVGKGRYGEVWRGSWQG--ENVAVKIFSSRDEKSWFRETELYNTVMLRHENIL 65
Query: 60 RFYSWYETSAH----LWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK 115
F + TS H LWL+ Y G L L Q L S + + L +LH +
Sbjct: 66 GFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 116 --------GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY 167
I + DLK NIL+ +NG+ + D GLA + S + + GT Y
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRY 183
Query: 168 MAPELFEEG-GVHSYAS----DLWGLGCVLYE 194
MAPE+ +E V + S D+W G VL+E
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 215
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 9 AIGRGKYSTVYKGR-----KKKTIEYFAIKSVDK--SQKSKV--LQEVRMLHSLDHPNVL 59
+G G + VY+G+ + A+K++ + S++ ++ L E ++ +H N++
Sbjct: 38 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 97
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED----SIRDL---AQDLVRALQYL 112
R S +++LE GGDL S LR+ P ++ DL A+D+ QYL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 113 HSKGIIYCDLKPSNILLDENGR---TKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPC 166
I+ D+ N LL G K+ DFG+AR + AS K +MLP
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------ 211
Query: 167 YMAPELFEEGGVHSYASDLWGLGCVLYECYA 197
+M PE F E G+ + +D W G +L+E ++
Sbjct: 212 WMPPEAFME-GIFTSKTDTWSFGVLLWEIFS 241
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 8 EAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKVL---QEVRMLHSLDHPNVLR 60
+ +G+G + +V Y + T E A+K + S + + +E+ +L SL H N+++
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 61 FYS--WYETSAHLWLVLEYCVGGDLMSLLRQDNQ-LPEDSIRDLAQDLVRALQYLHSKGI 117
+ + +L L++EY G L L++ + + + + + ++YL +K
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 133
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELFEEG 176
I+ DL NIL++ R K+ DFGL + L + P +P + APE E
Sbjct: 134 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE---SPIFWYAPESLTES 190
Query: 177 GVHSYASDLWGLGCVLYECYA 197
S ASD+W G VLYE +
Sbjct: 191 KF-SVASDVWSFGVVLYELFT 210
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 9 AIGRGKYSTVYKGR-----KKKTIEYFAIKSVDK--SQKSKV--LQEVRMLHSLDHPNVL 59
+G G + VY+G+ + A+K++ + S++ ++ L E ++ +H N++
Sbjct: 29 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 88
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED----SIRDL---AQDLVRALQYL 112
R S +++LE GGDL S LR+ P ++ DL A+D+ QYL
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 113 HSKGIIYCDLKPSNILLDENGR---TKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPC 166
I+ D+ N LL G K+ DFG+AR + AS K +MLP
Sbjct: 149 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------ 202
Query: 167 YMAPELFEEGGVHSYASDLWGLGCVLYECYA 197
+M PE F E G+ + +D W G +L+E ++
Sbjct: 203 WMPPEAFME-GIFTSKTDTWSFGVLLWEIFS 232
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 113/239 (47%), Gaps = 44/239 (18%)
Query: 10 IGRGKYSTVYKGR-----KKKTIEYFAIKSVDK----SQKSKVLQEVRML-HSLDHPNVL 59
+GRG + V + K T A+K + + S+ ++ E+++L H H NV+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 60 RFY-SWYETSAHLWLVLEYCVGGDLMSLLRQD-------NQLPEDSIRDL---------A 102
+ + L +++E+C G+L + LR + PED +D +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 103 QDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLAR---KLSDASKAPSSMLPQ 159
+ + +++L S+ I+ DL NILL E K+CDFGLAR K D + + LP
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 216
Query: 160 AKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG----REFTQLVK 212
+MAPE +F+ V++ SD+W G +L+E ++ G P+ G EF + +K
Sbjct: 217 K------WMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 267
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 44/239 (18%)
Query: 10 IGRGKYSTVYKGR-----KKKTIEYFAIKSVDK----SQKSKVLQEVRML-HSLDHPNVL 59
+GRG + V + K T A+K + + S+ ++ E+++L H H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 60 RFY-SWYETSAHLWLVLEYCVGGDLMSLLR-QDNQL------PEDSIRDL---------A 102
+ + L +++E+C G+L + LR + N+ PED +D +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 103 QDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKL---SDASKAPSSMLPQ 159
+ + +++L S+ I+ DL NILL E K+CDFGLAR + D + + LP
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPL 214
Query: 160 AKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG----REFTQLVK 212
+MAPE +F+ V++ SD+W G +L+E ++ G P+ G EF + +K
Sbjct: 215 K------WMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 9 AIGRGKYSTVYKGR-----KKKTIEYFAIKSVDK--SQKSKV--LQEVRMLHSLDHPNVL 59
+G G + VY+G+ + A+K++ + S++ ++ L E ++ +H N++
Sbjct: 54 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 113
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED----SIRDL---AQDLVRALQYL 112
R S +++LE GGDL S LR+ P ++ DL A+D+ QYL
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 113 HSKGIIYCDLKPSNILLDENGR---TKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPC 166
I+ D+ N LL G K+ DFG+AR + AS K +MLP
Sbjct: 174 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------ 227
Query: 167 YMAPELFEEGGVHSYASDLWGLGCVLYECYA 197
+M PE F E G+ + +D W G +L+E ++
Sbjct: 228 WMPPEAFME-GIFTSKTDTWSFGVLLWEIFS 257
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 102/213 (47%), Gaps = 14/213 (6%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWY 65
E +G G++ V+ G + A+KS+ + S L E ++ L H ++R Y+
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 72
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
T ++++ EY G L+ L+ + +L + + D+A + + ++ + I+ +L+
Sbjct: 73 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLR 132
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEEGGVHSYA 182
+NIL+ + K+ DFGLAR + D + + P + APE G +
Sbjct: 133 AANILVSDTLSCKIADFGLARLIED-----NEYTAREGAKFPIKWTAPEAINY-GTFTIK 186
Query: 183 SDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
SD+W G +L E GR P+ G ++++++
Sbjct: 187 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 219
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 36 DKSQKSKVLQEVRMLHSLDHPNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQ 89
+++ + +E+ ++ ++H N++ + + E ++LV+E + +L +++
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQM 121
Query: 90 DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDA 149
+L + + L ++ +++LHS GII+ DLKPSNI++ + K+ DFGLAR
Sbjct: 122 --ELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----- 174
Query: 150 SKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
A +S + T Y APE+ G + D+W +GC++ E + F GR++
Sbjct: 175 -TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 9 AIGRGKYSTVYKGR-----KKKTIEYFAIKSVDKSQKSK----VLQEVRMLHSLDHPNVL 59
+G G + VY+G+ + A+K++ + + L E ++ +H N++
Sbjct: 52 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIV 111
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED----SIRDL---AQDLVRALQYL 112
R S +++LE GGDL S LR+ P ++ DL A+D+ QYL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 113 HSKGIIYCDLKPSNILLDENGR---TKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPC 166
I+ D+ N LL G K+ DFG+AR + AS K +MLP
Sbjct: 172 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------ 225
Query: 167 YMAPELFEEGGVHSYASDLWGLGCVLYECYA 197
+M PE F E G+ + +D W G +L+E ++
Sbjct: 226 WMPPEAFME-GIFTSKTDTWSFGVLLWEIFS 255
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 40/227 (17%)
Query: 10 IGRGKYSTVYKGR-----KKKTIEYFAIKSVDK----SQKSKVLQEVRML-HSLDHPNVL 59
+GRG + V + K T A+K + + S+ ++ E+++L H H NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 60 RFY-SWYETSAHLWLVLEYCVGGDLMSLLR-QDNQL------PEDSIRDL---------A 102
+ + L ++ E+C G+L + LR + N+ PED +D +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 103 QDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLS---DASKAPSSMLPQ 159
+ + +++L S+ I+ DL NILL E K+CDFGLAR + D + + LP
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 160 AKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG 204
+MAPE +F+ V++ SD+W G +L+E ++ G P+ G
Sbjct: 206 K------WMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 9 AIGRGKYSTVYKGR-----KKKTIEYFAIKSVDK--SQKSKV--LQEVRMLHSLDHPNVL 59
+G G + VY+G+ + A+K++ + S++ ++ L E ++ +H N++
Sbjct: 44 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 103
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED----SIRDL---AQDLVRALQYL 112
R S +++LE GGDL S LR+ P ++ DL A+D+ QYL
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 113 HSKGIIYCDLKPSNILLDENGR---TKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPC 166
I+ D+ N LL G K+ DFG+AR + AS K +MLP
Sbjct: 164 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------ 217
Query: 167 YMAPELFEEGGVHSYASDLWGLGCVLYECYA 197
+M PE F E G+ + +D W G +L+E ++
Sbjct: 218 WMPPEAFME-GIFTSKTDTWSFGVLLWEIFS 247
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 40/227 (17%)
Query: 10 IGRGKYSTVYKGR-----KKKTIEYFAIKSVDK----SQKSKVLQEVRML-HSLDHPNVL 59
+GRG + V + K T A+K + + S+ ++ E+++L H H NV+
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 60 RFY-SWYETSAHLWLVLEYCVGGDLMSLLR-QDNQL------PEDSIRDL---------A 102
+ + L +++E+C G+L + LR + N+ PED +D +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 103 QDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKL---SDASKAPSSMLPQ 159
+ + +++L S+ I+ DL NILL E K+CDFGLAR + D + + LP
Sbjct: 192 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 251
Query: 160 AKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG 204
+MAPE +F+ V++ SD+W G +L+E ++ G P+ G
Sbjct: 252 K------WMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPG 290
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 9 AIGRGKYSTVYKGR-----KKKTIEYFAIKSVDK--SQKSKV--LQEVRMLHSLDHPNVL 59
+G G + VY+G+ + A+K++ + S++ ++ L E ++ +H N++
Sbjct: 64 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 123
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED----SIRDL---AQDLVRALQYL 112
R S +++LE GGDL S LR+ P ++ DL A+D+ QYL
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 113 HSKGIIYCDLKPSNILLDENGR---TKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPC 166
I+ D+ N LL G K+ DFG+AR + AS K +MLP
Sbjct: 184 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------ 237
Query: 167 YMAPELFEEGGVHSYASDLWGLGCVLYECYA 197
+M PE F E G+ + +D W G +L+E ++
Sbjct: 238 WMPPEAFME-GIFTSKTDTWSFGVLLWEIFS 267
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 9 AIGRGKYSTVYKGR-----KKKTIEYFAIKSVDK--SQKSKV--LQEVRMLHSLDHPNVL 59
+G G + VY+G+ + A+K++ + S++ ++ L E ++ +H N++
Sbjct: 37 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 96
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED----SIRDL---AQDLVRALQYL 112
R S ++++E GGDL S LR+ P ++ DL A+D+ QYL
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 113 HSKGIIYCDLKPSNILLDENGR---TKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPC 166
I+ D+ N LL G K+ DFG+AR + AS K +MLP
Sbjct: 157 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------ 210
Query: 167 YMAPELFEEGGVHSYASDLWGLGCVLYECYA 197
+M PE F E G+ + +D W G +L+E ++
Sbjct: 211 WMPPEAFME-GIFTSKTDTWSFGVLLWEIFS 240
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVL--QEVRMLHSLDHPNVLRFYSWYET 67
+GRG + V++ K+T A+K V + +V +E+ L P ++ Y
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV----RLEVFRAEELMACAGLTSPRIVPLYGAVRE 156
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNI 127
+ + +E GG L L+++ LPED + L+YLHS+ I++ D+K N+
Sbjct: 157 GPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNV 216
Query: 128 LLDENG-RTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLW 186
LL +G LCDFG A L S + GT +MAPE+ G D+W
Sbjct: 217 LLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVV-LGRSCDAKVDVW 275
Query: 187 GLGCVLYECYAGRPPFV 203
C++ G P+
Sbjct: 276 SSCCMMLHMLNGCHPWT 292
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 8 EAIGRGKYSTVYKGRKK----KTIEYFAIKSVD----KSQKSKVLQEVRMLHSLDHPNVL 59
+ IG G++ VYKG K K AIK++ + Q+ L E ++ H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGII 118
R + ++ EY G L LR+ D + + + + + ++YL + +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV 169
Query: 119 YCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEEGG 177
+ DL NIL++ N K+ DFGL+R L D P + + P + APE
Sbjct: 170 HRDLAARNILVNSNLVCKVSDFGLSRVLED---DPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 178 VHSYASDLWGLGCVLYEC--YAGRP 200
S ASD+W G V++E Y RP
Sbjct: 227 FTS-ASDVWSFGIVMWEVMTYGERP 250
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 110/277 (39%), Gaps = 46/277 (16%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYET 67
+ +G G V + K+T E FA+K + K++ E+ S P+++R YE
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYEN 82
Query: 68 ----SAHLWLVLEYCVGGDLMSLL--RQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
L +V+E GG+L S + R D E ++ + + A+QYLHS I + D
Sbjct: 83 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 142
Query: 122 LKPSNILLDE---NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGV 178
+KP N+L N KL DFG A++ + G
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETT----------------------------GEK 174
Query: 179 HSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFAN------ 232
+ + D+W LG ++Y G PPF + + ++
Sbjct: 175 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 234
Query: 233 -LINSLLVKDPAQRLHWSDLCGHAFWRTKLTPMPLPP 268
LI +LL +P QR+ ++ H W + T +P P
Sbjct: 235 MLIRNLLKTEPTQRMTITEFMNHP-WIMQSTKVPQTP 270
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 5 HIYEAIGRGKYSTVYKG----RKKKTIEYFAIKSVDK----SQKSKVLQEVRMLHSLDHP 56
H IG+G + VY G + + I+ AIKS+ + Q L+E ++ L+HP
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQ-CAIKSLSRITEMQQVEAFLREGLLMRGLNHP 82
Query: 57 NVLRFYSWY---ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQ---DLVRALQ 110
NVL E H+ +L Y GDL+ +R + P +++DL + R ++
Sbjct: 83 NVLALIGIMLPPEGLPHV--LLPYMCHGDLLQFIRSPQRNP--TVKDLISFGLQVARGME 138
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAP 170
YL + ++ DL N +LDE+ K+ DFGLAR + D A+ + A
Sbjct: 139 YLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK-WTAL 197
Query: 171 ELFEEGGVHSYASDLWGLGCVLYECYA-GRPPF 202
E + + SD+W G +L+E G PP+
Sbjct: 198 ESLQTYRF-TTKSDVWSFGVLLWELLTRGAPPY 229
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQK--SKVLQEVRMLHSL-DH 55
Q + EAIG K K + A+K + D ++K S ++ E+ M+ + H
Sbjct: 41 FGQVVLAEAIGLDK-------DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ----------------DNQLPEDSIR 99
N++ L++++EY G+L L+ + QL +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 100 DLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLAR---KLSDASKAPSSM 156
A + R ++YL SK I+ DL N+L+ E+ K+ DFGLAR + K +
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGR 213
Query: 157 LPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVK 212
LP +MAPE LF+ ++++ SD+W G +L+E + G P+ G +L K
Sbjct: 214 LPVK------WMAPEALFDR--IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 36 DKSQKSKVLQEVRMLHSLDHPNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQ 89
+++ + +E+ ++ ++H N++ + + E ++LV+E + +L +++
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQM 121
Query: 90 DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDA 149
+L + + L ++ +++LHS GII+ DLKPSNI++ + K+ DFGLAR
Sbjct: 122 --ELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----- 174
Query: 150 SKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
A +S + T Y APE+ G + D+W +GC++ E + F GR++
Sbjct: 175 -TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 9 AIGRGKYSTVYKGR-----KKKTIEYFAIKSVDK--SQKSKV--LQEVRMLHSLDHPNVL 59
+G G + VY+G+ + A+K++ + S++ ++ L E ++ +H N++
Sbjct: 52 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 111
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED----SIRDL---AQDLVRALQYL 112
R S ++++E GGDL S LR+ P ++ DL A+D+ QYL
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 113 HSKGIIYCDLKPSNILLDENGR---TKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPC 166
I+ D+ N LL G K+ DFG+AR + AS K +MLP
Sbjct: 172 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------ 225
Query: 167 YMAPELFEEGGVHSYASDLWGLGCVLYECYA 197
+M PE F E G+ + +D W G +L+E ++
Sbjct: 226 WMPPEAFME-GIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 44/239 (18%)
Query: 10 IGRGKYSTVYKGR-----KKKTIEYFAIKSVDK----SQKSKVLQEVRML-HSLDHPNVL 59
+GRG + V + K T A+K + + S+ ++ E+++L H H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 60 RFY-SWYETSAHLWLVLEYCVGGDLMSLLR-QDNQL------PEDSIRDL---------A 102
+ + L +++E+C G+L + LR + N+ PED +D +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 103 QDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKL---SDASKAPSSMLPQ 159
+ + +++L S+ I+ DL NILL E K+CDFGLAR + D + + LP
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 214
Query: 160 AKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG----REFTQLVK 212
+MAPE +F+ V++ SD+W G +L+E ++ G P+ G EF + +K
Sbjct: 215 K------WMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 23/206 (11%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHS--LDHPNVLRFYSWY 65
E +G+G+Y V++G + E A+K + +E + ++ L H N+L F +
Sbjct: 14 ECVGKGRYGEVWRGSWQG--ENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 66 ETSAH----LWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK------ 115
TS H LWL+ Y G L L Q L S + + L +LH +
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 116 --GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELF 173
I + DLK NIL+ +NG+ + D GLA + S + + GT YMAPE+
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 174 EE----GGVHSYAS-DLWGLGCVLYE 194
+E SY D+W G VL+E
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWE 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 15/201 (7%)
Query: 8 EAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKVL---QEVRMLHSLDHPNVLR 60
+ +G+G + +V Y + T E A+K + S + + +E+ +L SL H N+++
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 61 FYS--WYETSAHLWLVLEYCVGGDLMSLLR-QDNQLPEDSIRDLAQDLVRALQYLHSKGI 117
+ + +L L++EY G L L+ ++ + + + ++YL +K
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELFEEG 176
I+ DL NIL++ R K+ DFGL + L + P +P + APE E
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE---SPIFWYAPESLTES 195
Query: 177 GVHSYASDLWGLGCVLYECYA 197
S ASD+W G VLYE +
Sbjct: 196 KF-SVASDVWSFGVVLYELFT 215
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 36 DKSQKSKVLQEVRMLHSLDHPNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQ 89
+++ + +E+ ++ ++H N++ + + E ++LV+E + +L +++
Sbjct: 56 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQM 114
Query: 90 DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDA 149
+L + + L ++ +++LHS GII+ DLKPSNI++ + K+ DFGLAR
Sbjct: 115 --ELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----- 167
Query: 150 SKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
A +S + T Y APE+ G + D+W +GC++ E + F GR++
Sbjct: 168 -TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDY 223
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 8 EAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKVL---QEVRMLHSLDHPNVLR 60
+ +G+G + +V Y + T E A+K + S + + +E+ +L SL H N+++
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 61 FYS--WYETSAHLWLVLEYCVGGDLMSLLRQDNQ-LPEDSIRDLAQDLVRALQYLHSKGI 117
+ + +L L++EY G L L++ + + + + + ++YL +K
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELFEEG 176
I+ DL NIL++ R K+ DFGL + L + P +P + APE E
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGE---SPIFWYAPESLTES 192
Query: 177 GVHSYASDLWGLGCVLYECYA 197
S ASD+W G VLYE +
Sbjct: 193 KF-SVASDVWSFGVVLYELFT 212
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 36 DKSQKSKVLQEVRMLHSLDHPNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQ 89
+++ + +E+ ++ ++H N++ + + E ++LV+E + +L +++
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQM 121
Query: 90 DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDA 149
+L + + L ++ +++LHS GII+ DLKPSNI++ + K+ DFGLAR
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----- 174
Query: 150 SKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
A +S + T Y APE+ G + D+W +GC++ E + F GR++
Sbjct: 175 -TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 40/227 (17%)
Query: 10 IGRGKYSTVYKGR-----KKKTIEYFAIKSVDK----SQKSKVLQEVRML-HSLDHPNVL 59
+GRG + V + K T A+K + + S+ ++ E+++L H H NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 60 RFY-SWYETSAHLWLVLEYCVGGDLMSLLR-QDNQL------PEDSIRDL---------A 102
+ + L ++ E+C G+L + LR + N+ PED +D +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 103 QDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLAR---KLSDASKAPSSMLPQ 159
+ + +++L S+ I+ DL NILL E K+CDFGLAR K D + + LP
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 160 AKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG 204
+MAPE +F+ V++ SD+W G +L+E ++ G P+ G
Sbjct: 206 K------WMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL-DHPNVLR 60
+ Y + +GRGKYS V++ E +K + +K K+ +E+++L +L PN++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 61 FYSWYE--TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S LV E+ D L RQ L + IR ++++AL Y HS GI+
Sbjct: 97 LADIVKDPVSRTPALVFEHVNNTDFKQL-RQ--TLTDYDIRFYMYEILKALDYCHSMGIM 153
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D E+ + +L D+GLA + + + + PEL +
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY------NVRVASRYFKGPELLVDYQ 207
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFV-GRE-FTQLVK 212
++ Y+ D+W LGC+L + PF G + + QLV+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 36/234 (15%)
Query: 9 AIGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSL-DHPNVLRFYS 63
A G+ +T Y K A+K S +++ ++ E+++L L +H N++
Sbjct: 51 AFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG 110
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQ------------------LPEDSIRDLAQDL 105
++ EYC GDL++ LR+ L + + + +
Sbjct: 111 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQV 170
Query: 106 VRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTP 165
+ + +L SK I+ DL NILL TK+CDFGLAR + K S+ + + P
Sbjct: 171 AKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDI----KNDSNYVVKGNARLP 226
Query: 166 C-YMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG----REFTQLVK 212
+MAPE +F V+++ SD+W G L+E ++ G P+ G +F +++K
Sbjct: 227 VKWMAPESIFN--CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 278
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 29/211 (13%)
Query: 9 AIGRGKYSTVYKGR-----KKKTIEYFAIKSVDK--SQKSKV--LQEVRMLHSLDHPNVL 59
+G G + VY+G+ + A+K++ + S++ ++ L E ++ +H N++
Sbjct: 55 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 114
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED----SIRDL---AQDLVRALQYL 112
R S +++LE GGDL S LR+ P ++ DL A+D+ QYL
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 113 HSKGIIYCDLKPSNILLDENGR---TKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPC 166
I+ D+ N LL G K+ DFG+AR + A K +MLP
Sbjct: 175 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK------ 228
Query: 167 YMAPELFEEGGVHSYASDLWGLGCVLYECYA 197
+M PE F E G+ + +D W G +L+E ++
Sbjct: 229 WMPPEAFME-GIFTSKTDTWSFGVLLWEIFS 258
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 106/218 (48%), Gaps = 21/218 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+ +Y + IG G V AIK + +++ + +E+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 56 PNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
N++ + + E +++V+E + +L +++ +L + + L ++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
++LHS GII+ DLKPSNI++ + K+ DFGLAR A +S + + + T Y A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMEPEVVTRYYRA 193
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
PE+ G + DLW +GC++ E + F GR++
Sbjct: 194 PEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDY 230
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 29/211 (13%)
Query: 9 AIGRGKYSTVYKGR-----KKKTIEYFAIKSVDK--SQKSKV--LQEVRMLHSLDHPNVL 59
+G G + VY+G+ + A+K++ + S++ ++ L E ++ +H N++
Sbjct: 78 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 137
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED----SIRDL---AQDLVRALQYL 112
R S +++LE GGDL S LR+ P ++ DL A+D+ QYL
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 113 HSKGIIYCDLKPSNILLDENGR---TKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPC 166
I+ D+ N LL G K+ DFG+AR + A K +MLP
Sbjct: 198 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK------ 251
Query: 167 YMAPELFEEGGVHSYASDLWGLGCVLYECYA 197
+M PE F E G+ + +D W G +L+E ++
Sbjct: 252 WMPPEAFME-GIFTSKTDTWSFGVLLWEIFS 281
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 15/199 (7%)
Query: 10 IGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKVL---QEVRMLHSLDHPNVLRFY 62
+G+G + +V Y + T E A+K + S + + +E+ +L SL H N++++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 63 S--WYETSAHLWLVLEYCVGGDLMSLLRQDNQ-LPEDSIRDLAQDLVRALQYLHSKGIIY 119
+ +L L++E+ G L L++ + + + + + ++YL +K I+
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 140
Query: 120 CDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELFEEGGV 178
DL NIL++ R K+ DFGL + L + P +P + APE E
Sbjct: 141 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE---SPIFWYAPESLTESKF 197
Query: 179 HSYASDLWGLGCVLYECYA 197
S ASD+W G VLYE +
Sbjct: 198 -SVASDVWSFGVVLYELFT 215
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 40/227 (17%)
Query: 10 IGRGKYSTVYKGR-----KKKTIEYFAIKSVDK----SQKSKVLQEVRML-HSLDHPNVL 59
+GRG + V + K T A+K + + S+ ++ E+++L H H NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 60 RFY-SWYETSAHLWLVLEYCVGGDLMSLLR-QDNQL------PEDSIRDL---------A 102
+ + L ++ E+C G+L + LR + N+ PED +D +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 103 QDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLAR---KLSDASKAPSSMLPQ 159
+ + +++L S+ I+ DL NILL E K+CDFGLAR K D + + LP
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 160 AKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG 204
+MAPE +F+ V++ SD+W G +L+E ++ G P+ G
Sbjct: 206 K------WMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 32/230 (13%)
Query: 9 AIGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSL-DHPNVLRFYS 63
A G+ +T + K+ + A+K + +K ++ E++++ L H N++
Sbjct: 58 AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 117
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED-----------SIRDL---AQDLVRAL 109
+ ++ EYC GDL++ LR+ +++ E S RDL + + + +
Sbjct: 118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGM 177
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YM 168
+L SK I+ D+ N+LL K+ DFGLAR + + S+ + + P +M
Sbjct: 178 AFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN----DSNYIVKGNARLPVKWM 233
Query: 169 APE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF----VGREFTQLVK 212
APE +F+ V++ SD+W G +L+E ++ G P+ V +F +LVK
Sbjct: 234 APESIFD--CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 281
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 32/230 (13%)
Query: 9 AIGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSL-DHPNVLRFYS 63
A G+ +T + K+ + A+K + +K ++ E++++ L H N++
Sbjct: 58 AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 117
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED-----------SIRDL---AQDLVRAL 109
+ ++ EYC GDL++ LR+ +++ E S RDL + + + +
Sbjct: 118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGM 177
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YM 168
+L SK I+ D+ N+LL K+ DFGLAR + + S+ + + P +M
Sbjct: 178 AFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN----DSNYIVKGNARLPVKWM 233
Query: 169 APE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF----VGREFTQLVK 212
APE +F+ V++ SD+W G +L+E ++ G P+ V +F +LVK
Sbjct: 234 APESIFD--CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 281
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 17/221 (7%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDH 55
+ E +G G + V +G KT+ A+K + S+ ++EV +HSLDH
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHS 114
N++R Y T + +V E G L+ LR+ ++ A + + YL S
Sbjct: 81 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 139
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K I+ DL N+LL K+ DFGL R L ++ + + + APE +
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD--HXVMQEHRKVPFAWCAPESLK 197
Query: 175 EGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
S+ASD W G L+E + G+ P++G +Q++ I
Sbjct: 198 T-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 108/229 (47%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G + I+ A+K+V++S ++ + L E ++ +V+R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLR-------QDNQLPEDSIRDLAQ---DLVRALQ 110
+V+E GDL S LR + P +++++ Q ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++K ++ +L N ++ + K+ DFG+ R + + K +LP +
Sbjct: 145 YLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------W 198
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
MAPE ++ GV + +SD+W G VL+E + P+ G Q++K ++
Sbjct: 199 MAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL-DHPNVLR 60
+ Y + +GRGKYS V++ E +K + +K K+ +E+++L +L PN++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 61 FYSWYE--TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S LV E+ D L + L + IR ++++AL Y HS GI+
Sbjct: 97 LADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIM 153
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D E+ + +L D+GLA + + + + PEL +
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY------NVRVASRYFKGPELLVDYQ 207
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFV-GRE-FTQLVK 212
++ Y+ D+W LGC+L + PF G + + QLV+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 36/234 (15%)
Query: 9 AIGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSL-DHPNVLRFYS 63
A G+ +T Y K A+K S +++ ++ E+++L L +H N++
Sbjct: 35 AFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG 94
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQ------------------LPEDSIRDLAQDL 105
++ EYC GDL++ LR+ L + + + +
Sbjct: 95 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQV 154
Query: 106 VRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTP 165
+ + +L SK I+ DL NILL TK+CDFGLAR + K S+ + + P
Sbjct: 155 AKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDI----KNDSNYVVKGNARLP 210
Query: 166 C-YMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG----REFTQLVK 212
+MAPE +F V+++ SD+W G L+E ++ G P+ G +F +++K
Sbjct: 211 VKWMAPESIFN--CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 262
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL-DHPNVLR 60
+ Y + +GRGKYS V++ E +K + +K K+ +E+++L +L PN++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 61 FYSWYE--TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S LV E+ D L + L + IR ++++AL Y HS GI+
Sbjct: 97 LADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIM 153
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D E+ + +L D+GLA + + + + PEL +
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY------NVRVASRYFKGPELLVDYQ 207
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFV-GRE-FTQLVK 212
++ Y+ D+W LGC+L + PF G + + QLV+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL-DHPNVLR 60
+ Y + +GRGKYS V++ E +K + +K K+ +E+++L +L PN++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 61 FYSWYE--TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S LV E+ D L + L + IR ++++AL Y HS GI+
Sbjct: 97 LADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIM 153
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D E+ + +L D+GLA + + + + PEL +
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY------NVRVASRYFKGPELLVDYQ 207
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFV-GRE-FTQLVK 212
++ Y+ D+W LGC+L + PF G + + QLV+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 17/221 (7%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDH 55
+ E +G G + V +G KT+ A+K + S+ ++EV +HSLDH
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHS 114
N++R Y T + +V E G L+ LR+ ++ A + + YL S
Sbjct: 71 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K I+ DL N+LL K+ DFGL R L ++ + + + APE +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD--HXVMQEHRKVPFAWCAPESLK 187
Query: 175 EGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
S+ASD W G L+E + G+ P++G +Q++ I
Sbjct: 188 T-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL-DHPNVLR 60
+ Y + +GRGKYS V++ E +K + +K K+ +E+++L +L PN++
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 94
Query: 61 FYSWYE--TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S LV E+ D L + L + IR ++++AL Y HS GI+
Sbjct: 95 LADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIM 151
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D E+ + +L D+GLA + + + + PEL +
Sbjct: 152 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY------NVRVASRYFKGPELLVDYQ 205
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFV-GRE-FTQLVK 212
++ Y+ D+W LGC+L + PF G + + QLV+
Sbjct: 206 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 242
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL-DHPNVLR 60
+ Y + +GRGKYS V++ E +K + +K K+ +E+++L +L PN++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 61 FYSWYE--TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S LV E+ D L + L + IR ++++AL Y HS GI+
Sbjct: 97 LADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIM 153
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D E+ + +L D+GLA + + + + PEL +
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY------NVRVASRYFKGPELLVDYQ 207
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFV-GRE-FTQLVK 212
++ Y+ D+W LGC+L + PF G + + QLV+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 108/229 (47%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G + I+ A+K+V++S ++ + L E ++ +V+R
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLR-------QDNQLPEDSIRDLAQ---DLVRALQ 110
+V+E GDL S LR + P +++++ Q ++ +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++K ++ +L N ++ + K+ DFG+ R + + K +LP +
Sbjct: 146 YLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------W 199
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
MAPE ++ GV + +SD+W G VL+E + P+ G Q++K ++
Sbjct: 200 MAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 247
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL-DHPNVLR 60
+ Y + +GRGKYS V++ E +K + +K K+ +E+++L +L PN++
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 95
Query: 61 FYSWYE--TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S LV E+ D L + L + IR ++++AL Y HS GI+
Sbjct: 96 LADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIM 152
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D E+ + +L D+GLA + + + + PEL +
Sbjct: 153 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY------NVRVASRYFKGPELLVDYQ 206
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFV-GRE-FTQLVK 212
++ Y+ D+W LGC+L + PF G + + QLV+
Sbjct: 207 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 243
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL-DHPNVLR 60
+ Y + +GRGKYS V++ E +K + +K K+ +E+++L +L PN++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 61 FYSWYE--TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S LV E+ D L + L + IR ++++AL Y HS GI+
Sbjct: 97 LADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIM 153
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D E+ + +L D+GLA + + + + PEL +
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY------NVRVASRYFKGPELLVDYQ 207
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFV-GRE-FTQLVK 212
++ Y+ D+W LGC+L + PF G + + QLV+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL-DHPNVLR 60
+ Y + +GRGKYS V++ E +K + +K K+ +E+++L +L PN++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 61 FYSWYE--TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S LV E+ D L + L + IR ++++AL Y HS GI+
Sbjct: 97 LADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIM 153
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D E+ + +L D+GLA + + + + PEL +
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY------NVRVASRYFKGPELLVDYQ 207
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFV-GRE-FTQLVK 212
++ Y+ D+W LGC+L + PF G + + QLV+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL-DHPNVLR 60
+ Y + +GRGKYS V++ E +K + +K K+ +E+++L +L PN++
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 95
Query: 61 FYSWYE--TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S LV E+ D L + L + IR ++++AL Y HS GI+
Sbjct: 96 LADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIM 152
Query: 119 YCDLKPSNILLD-ENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D E+ + +L D+GLA + + + + PEL +
Sbjct: 153 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY------NVRVASRYFKGPELLVDYQ 206
Query: 178 VHSYASDLWGLGCVLYECYAGRPPFV-GRE-FTQLVK 212
++ Y+ D+W LGC+L + PF G + + QLV+
Sbjct: 207 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 243
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 9 AIGRGKYSTVYKGR-----KKKTIEYFAIKSVDK--SQKSKV--LQEVRMLHSLDHPNVL 59
+G G + VY+G+ + A+K++ + S++ ++ L E ++ +H N++
Sbjct: 38 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 97
Query: 60 RFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED----SIRDL---AQDLVRALQYL 112
R S +++LE GGDL S LR+ P ++ DL A+D+ QYL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 113 HSKGIIYCDLKPSNILLDENGR---TKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPC 166
I+ D+ N LL G K+ DFG+A+ + AS K +MLP
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK------ 211
Query: 167 YMAPELFEEGGVHSYASDLWGLGCVLYECYA 197
+M PE F E G+ + +D W G +L+E ++
Sbjct: 212 WMPPEAFME-GIFTSKTDTWSFGVLLWEIFS 241
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 41/231 (17%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQK--SKVLQEVRMLHSL-DHPNVLRFY 62
EAIG K K + A+K + D ++K S ++ E+ M+ + H N++
Sbjct: 89 EAIGLDK-------DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLL 141
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQ----------------DNQLPEDSIRDLAQDLV 106
L++++EY G+L L+ + QL + A +
Sbjct: 142 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVA 201
Query: 107 RALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCG 163
R ++YL SK I+ DL N+L+ E+ K+ DFGLAR + K + LP
Sbjct: 202 RGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK--- 258
Query: 164 TPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+MAPE LF+ ++++ SD+W G +L+E + G P+ G +L K
Sbjct: 259 ---WMAPEALFDR--IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 304
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 36 DKSQKSKVLQEVRMLHSLDHPNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQ 89
+++ + +E+ ++ ++H N++ + + E ++LV+E + +L +++
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQM 121
Query: 90 DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDA 149
+L + + L ++ +++LHS GII+ DLKPSNI++ + K+ DFGLAR
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----- 174
Query: 150 SKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
A +S + T Y APE+ G + D+W +GC++ E + F GR++
Sbjct: 175 -TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 8/197 (4%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVL--QEVRMLHSLDHPNVLRFYSWYET 67
+GRG + V++ K+T A+K V + +V +E+ L P ++ Y
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV----RLEVFRAEELMACAGLTSPRIVPLYGAVRE 137
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNI 127
+ + +E GG L L+++ LPED + L+YLHS+ I++ D+K N+
Sbjct: 138 GPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNV 197
Query: 128 LLDENG-RTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLW 186
LL +G LCDFG A L + GT +MAPE+ G D+W
Sbjct: 198 LLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVV-LGRSCDAKVDVW 256
Query: 187 GLGCVLYECYAGRPPFV 203
C++ G P+
Sbjct: 257 SSCCMMLHMLNGCHPWT 273
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 19/222 (8%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDH 55
+ E +G G + V +G KT+ A+K + S+ ++EV +HSLDH
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 74
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHS 114
N++R Y T + +V E G L+ LR+ ++ A + + YL S
Sbjct: 75 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 133
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTP-CYMAPELF 173
K I+ DL N+LL K+ DFGL R L + + Q P + APE
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL---PQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 174 EEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
+ S+ASD W G L+E + G+ P++G +Q++ I
Sbjct: 191 KT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 231
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 28/226 (12%)
Query: 9 AIGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRML-HSLDHPNVLRFYS 63
A G+ +T + K+ + A+K + +K ++ E++++ H H N++
Sbjct: 50 AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 109
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPED-------SIRDL---AQDLVRALQYLH 113
+ ++ EYC GDL++ LR+ + D +RDL + + + + +L
Sbjct: 110 ACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA 169
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE- 171
SK I+ D+ N+LL K+ DFGLAR + + S+ + + P +MAPE
Sbjct: 170 SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN----DSNYIVKGNARLPVKWMAPES 225
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF----VGREFTQLVK 212
+F+ V++ SD+W G +L+E ++ G P+ V +F +LVK
Sbjct: 226 IFD--CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 269
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 17/221 (7%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDH 55
+ E +G G + V +G KT+ A+K + S+ ++EV +HSLDH
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHS 114
N++R Y T + +V E G L+ LR+ ++ A + + YL S
Sbjct: 81 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 139
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K I+ DL N+LL K+ DFGL R L ++ + + + APE +
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD--HYVMQEHRKVPFAWCAPESLK 197
Query: 175 EGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
S+ASD W G L+E + G+ P++G +Q++ I
Sbjct: 198 T-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 21/218 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+ +Y + IG G V AIK + +++ + +E+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 56 PNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
N++ + + E +++V+E + +L +++ +L + + L ++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
++LHS GII+ DLKPSNI++ + K+ DFGLAR A +S + + + T Y A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMEPEVVTRYYRA 193
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
PE+ G + D+W +GC++ E + F GR++
Sbjct: 194 PEVILGMG-YKENVDIWSVGCIMGEMVCHKILFPGRDY 230
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQK--SKVLQEVRMLHSL-DH 55
Q + EAIG K K + A+K + D ++K S ++ E+ M+ + H
Sbjct: 34 FGQVVLAEAIGLDK-------DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ----------------DNQLPEDSIR 99
N++ L++++EY G+L L+ + QL +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 100 DLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSM 156
A + R ++YL SK I+ DL N+L+ E+ K+ DFGLAR + K +
Sbjct: 147 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 206
Query: 157 LPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVK 212
LP +MAPE LF+ ++++ SD+W G +L+E + G P+ G +L K
Sbjct: 207 LPVK------WMAPEALFDR--IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 256
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 14/219 (6%)
Query: 6 IYEAIGRGKYSTVYKGRKK---KTIEYFAIKSVDKS----QKSKVLQEVRMLHSLDHPNV 58
I + IG G++ V GR K K AIK++ Q+ L E ++ DHPN+
Sbjct: 33 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 92
Query: 59 LRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGI 117
+ + ++ EY G L + LR+ D + + + + + ++YL
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSA 152
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEEG 176
++ DL NIL++ N K+ DFG++R L D P + P + APE
Sbjct: 153 VHRDLAARNILVNSNLVCKVSDFGMSRVLED---DPEAAYTTRGGKIPIRWTAPEAIAYR 209
Query: 177 GVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
S ASD+W G V++E + G P+ ++K+I
Sbjct: 210 KFTS-ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 247
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 36/234 (15%)
Query: 9 AIGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSL-DHPNVLRFYS 63
A G+ +T Y K A+K S +++ ++ E+++L L +H N++
Sbjct: 53 AFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG 112
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQ------------------LPEDSIRDLAQDL 105
++ EYC GDL++ LR+ L + + + +
Sbjct: 113 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQV 172
Query: 106 VRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTP 165
+ + +L SK I+ DL NILL TK+CDFGLAR + K S+ + + P
Sbjct: 173 AKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDI----KNDSNYVVKGNARLP 228
Query: 166 C-YMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG----REFTQLVK 212
+MAPE +F V+++ SD+W G L+E ++ G P+ G +F +++K
Sbjct: 229 VKWMAPESIFN--CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 280
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQK--SKVLQEVRMLHSL-DH 55
Q + EAIG K K + A+K + D ++K S ++ E+ M+ + H
Sbjct: 41 FGQVVLAEAIGLDK-------DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ----------------DNQLPEDSIR 99
N++ L++++EY G+L L+ + QL +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 100 DLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSM 156
A + R ++YL SK I+ DL N+L+ E+ K+ DFGLAR + K +
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 157 LPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVK 212
LP +MAPE LF+ ++++ SD+W G +L+E + G P+ G +L K
Sbjct: 214 LPVK------WMAPEALFDR--IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQK--SKVLQEVRMLHSL-DH 55
Q + EAIG K K + A+K + D ++K S ++ E+ M+ + H
Sbjct: 41 FGQVVLAEAIGLDK-------DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ----------------DNQLPEDSIR 99
N++ L++++EY G+L L+ + QL +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 100 DLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSM 156
A + R ++YL SK I+ DL N+L+ E+ K+ DFGLAR + K +
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 157 LPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVK 212
LP +MAPE LF+ ++++ SD+W G +L+E + G P+ G +L K
Sbjct: 214 LPVK------WMAPEALFDR--IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 26/201 (12%)
Query: 10 IGRGKYSTV----YKGRKKKTIEYFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLRF 61
+G G + V Y T E A+K++ +S QE+ +L +L H +++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 62 YSWYETS--AHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRD-----LAQDLVRALQYLHS 114
E + A L LV+EY G L + LP SI AQ + + YLH+
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLR------DYLPRHSIGLAQLLLFAQQICEGMAYLHA 152
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELF 173
+ I+ DL N+LLD + K+ DFGLA+ + + + + +P + APE
Sbjct: 153 QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRV---REDGDSPVFWYAPECL 209
Query: 174 EEGGVHSYASDLWGLGCVLYE 194
+E + YASD+W G LYE
Sbjct: 210 KEYKFY-YASDVWSFGVTLYE 229
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 17/221 (7%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDH 55
+ E +G G + V +G KT+ A+K + S+ ++EV +HSLDH
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHS 114
N++R Y T + +V E G L+ LR+ ++ A + + YL S
Sbjct: 71 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K I+ DL N+LL K+ DFGL R L ++ + + + APE +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD--HYVMQEHRKVPFAWCAPESLK 187
Query: 175 EGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
S+ASD W G L+E + G+ P++G +Q++ I
Sbjct: 188 T-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 14/219 (6%)
Query: 6 IYEAIGRGKYSTVYKGRKK---KTIEYFAIKSVDKS----QKSKVLQEVRMLHSLDHPNV 58
I + IG G++ V GR K K AIK++ Q+ L E ++ DHPN+
Sbjct: 18 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 77
Query: 59 LRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGI 117
+ + ++ EY G L + LR+ D + + + + + ++YL
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 137
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEEG 176
++ DL NIL++ N K+ DFG++R L D P + P + APE
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGMSRVLED---DPEAAYTTRGGKIPIRWTAPEAIAYR 194
Query: 177 GVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
S ASD+W G V++E + G P+ ++K+I
Sbjct: 195 KFTS-ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 232
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQK--SKVLQEVRMLHSL-DH 55
Q + EAIG K K + A+K + D ++K S ++ E+ M+ + H
Sbjct: 33 FGQVVLAEAIGLDK-------DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ----------------DNQLPEDSIR 99
N++ L++++EY G+L L+ + QL +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 100 DLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSM 156
A + R ++YL SK I+ DL N+L+ E+ K+ DFGLAR + K +
Sbjct: 146 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 205
Query: 157 LPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVK 212
LP +MAPE LF+ ++++ SD+W G +L+E + G P+ G +L K
Sbjct: 206 LPVK------WMAPEALFDR--IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 255
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 19/222 (8%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDH 55
+ E +G G + V +G KT+ A+K + S+ ++EV +HSLDH
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 74
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHS 114
N++R Y T + +V E G L+ LR+ ++ A + + YL S
Sbjct: 75 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 133
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTP-CYMAPELF 173
K I+ DL N+LL K+ DFGL R L + + Q P + APE
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL---PQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 174 EEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
+ S+ASD W G L+E + G+ P++G +Q++ I
Sbjct: 191 KT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 231
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQK--SKVLQEVRMLHSL-DH 55
Q + EAIG K K + A+K + D ++K S ++ E+ M+ + H
Sbjct: 26 FGQVVLAEAIGLDK-------DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ----------------DNQLPEDSIR 99
N++ L++++EY G+L L+ + QL +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 100 DLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSM 156
A + R ++YL SK I+ DL N+L+ E+ K+ DFGLAR + K +
Sbjct: 139 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 198
Query: 157 LPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVK 212
LP +MAPE LF+ ++++ SD+W G +L+E + G P+ G +L K
Sbjct: 199 LPVK------WMAPEALFDR--IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 248
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 36/234 (15%)
Query: 9 AIGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSL-DHPNVLRFYS 63
A G+ +T Y K A+K S +++ ++ E+++L L +H N++
Sbjct: 58 AFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG 117
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQ------------------LPEDSIRDLAQDL 105
++ EYC GDL++ LR+ L + + + +
Sbjct: 118 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQV 177
Query: 106 VRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTP 165
+ + +L SK I+ DL NILL TK+CDFGLAR + K S+ + + P
Sbjct: 178 AKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDI----KNDSNYVVKGNARLP 233
Query: 166 C-YMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG----REFTQLVK 212
+MAPE +F V+++ SD+W G L+E ++ G P+ G +F +++K
Sbjct: 234 VKWMAPESIFN--CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 17/221 (7%)
Query: 6 IYEAIGRGKYSTVYKGR----KKKTIEYFAIKSVDKSQKSK------VLQEVRMLHSLDH 55
+ E +G G + V +G KT+ A+K + S+ ++EV +HSLDH
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHS 114
N++R Y T + +V E G L+ LR+ ++ A + + YL S
Sbjct: 71 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFE 174
K I+ DL N+LL K+ DFGL R L ++ + + + APE +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD--HYVMQEHRKVPFAWCAPESLK 187
Query: 175 EGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
S+ASD W G L+E + G+ P++G +Q++ I
Sbjct: 188 T-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 36/234 (15%)
Query: 9 AIGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSL-DHPNVLRFYS 63
A G+ +T Y K A+K S +++ ++ E+++L L +H N++
Sbjct: 58 AFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG 117
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQ------------------LPEDSIRDLAQDL 105
++ EYC GDL++ LR+ L + + + +
Sbjct: 118 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQV 177
Query: 106 VRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTP 165
+ + +L SK I+ DL NILL TK+CDFGLAR + K S+ + + P
Sbjct: 178 AKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHI----KNDSNYVVKGNARLP 233
Query: 166 C-YMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG----REFTQLVK 212
+MAPE +F V+++ SD+W G L+E ++ G P+ G +F +++K
Sbjct: 234 VKWMAPESIFN--CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 12/143 (8%)
Query: 73 LVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLD-E 131
LV E+ D L + L + IR ++++AL Y HS GI++ D+KP N+++D E
Sbjct: 111 LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 132 NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCV 191
+ + +L D+GLA + + + + PEL + ++ Y+ D+W LGC+
Sbjct: 168 HRKLRLIDWGLAEFYHPGQEY------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 221
Query: 192 LYECYAGRPPFV-GRE-FTQLVK 212
L + PF G + + QLV+
Sbjct: 222 LASMIFRKEPFFHGHDNYDQLVR 244
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 32/221 (14%)
Query: 6 IYEAIGRGKYSTVYKGRKKKTIEYFAIK--SVDKSQKSKVLQEVRMLHSLDHPNVLRFYS 63
+ E RG++ V+K + EY A+K + Q + EV L + H N+L+F
Sbjct: 28 LLEVKARGRFGCVWKAQLLN--EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIG 85
Query: 64 WYE----TSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK---- 115
+ LWL+ + G L L+ N + + + +A+ + R L YLH
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 116 ------GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
I + D+K N+LL N + DFGLA K A + + GT YMA
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT---HGQVGTRRYMA 201
Query: 170 PELFEEGGVHSYAS-----DLWGLGCVLYE----CYAGRPP 201
PE+ EG ++ D++ +G VL+E C A P
Sbjct: 202 PEVL-EGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 41/231 (17%)
Query: 8 EAIGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQK--SKVLQEVRMLHSL-DHPNVLRFY 62
EAIG K K + A+K + D ++K S ++ E+ M+ + H N++
Sbjct: 37 EAIGLDK-------DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLL 89
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQ----------------DNQLPEDSIRDLAQDLV 106
L++++EY G+L L+ + QL + A +
Sbjct: 90 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVA 149
Query: 107 RALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCG 163
R ++YL SK I+ DL N+L+ E+ K+ DFGLAR + K + LP
Sbjct: 150 RGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK--- 206
Query: 164 TPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVK 212
+MAPE LF+ ++++ SD+W G +L+E + G P+ G +L K
Sbjct: 207 ---WMAPEALFDR--IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 252
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 8 EAIGRGKYSTV----YKGRKKKTIEYFAIKSVDKSQKSKVL---QEVRMLHSLDHPNVLR 60
+ +G+G + +V Y + T E A+K + S + + +E+ +L SL H N+++
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 61 FYS--WYETSAHLWLVLEYCVGGDLMSLLRQDNQ-LPEDSIRDLAQDLVRALQYLHSKGI 117
+ + +L L++EY G L L++ + + + + + ++YL +K
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 136
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELFEEG 176
I+ +L NIL++ R K+ DFGL + L + P +P + APE E
Sbjct: 137 IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGE---SPIFWYAPESLTES 193
Query: 177 GVHSYASDLWGLGCVLYECYA 197
S ASD+W G VLYE +
Sbjct: 194 KF-SVASDVWSFGVVLYELFT 213
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV--DKSQK--SKVLQEVRMLHSL-DH 55
Q + EAIG K K + A+K + D ++K S ++ E+ M+ + H
Sbjct: 41 FGQVVLAEAIGLDK-------DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 56 PNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ----------------DNQLPEDSIR 99
N++ L++++EY G+L L+ + QL +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 100 DLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSM 156
A + R ++YL SK I+ DL N+L+ E+ K+ DFGLAR + K +
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 157 LPQAKCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVK 212
LP +MAPE LF+ ++++ SD+W G +L+E + G P+ G +L K
Sbjct: 214 LPVK------WMAPEALFDR--IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 28/226 (12%)
Query: 9 AIGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRML-HSLDHPNVLRFYS 63
A G+ +T + K+ + A+K + +K ++ E++++ H H N++
Sbjct: 58 AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 117
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDS-------IRDL---AQDLVRALQYLH 113
+ ++ EYC GDL++ LR+ + D +RDL + + + + +L
Sbjct: 118 ACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA 177
Query: 114 SKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE- 171
SK I+ D+ N+LL K+ DFGLAR + + S+ + + P +MAPE
Sbjct: 178 SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN----DSNYIVKGNARLPVKWMAPES 233
Query: 172 LFEEGGVHSYASDLWGLGCVLYECYA-GRPPF----VGREFTQLVK 212
+F+ V++ SD+W G +L+E ++ G P+ V +F +LVK
Sbjct: 234 IFD--CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 277
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 14/219 (6%)
Query: 6 IYEAIGRGKYSTVYKGRKK---KTIEYFAIKSVDKS----QKSKVLQEVRMLHSLDHPNV 58
I + IG G++ V GR K K AIK++ Q+ L E ++ DHPN+
Sbjct: 12 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 71
Query: 59 LRFYSWYETSAHLWLVLEYCVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGI 117
+ + ++ EY G L + LR+ D + + + + + ++YL
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 131
Query: 118 IYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEEG 176
++ DL NIL++ N K+ DFG++R L D P + P + APE
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGMSRVLED---DPEAAYTTRGGKIPIRWTAPEAIAYR 188
Query: 177 GVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
S ASD+W G V++E + G P+ ++K+I
Sbjct: 189 KFTS-ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 226
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDH-PNVLR 60
+ Y + +GRGKYS V++G E IK + +K K+ +E+++L +L PN+++
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVK 91
Query: 61 FYSWY--ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S L+ EY D L L + IR +L++AL Y HS+GI+
Sbjct: 92 LLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIM 148
Query: 119 YCDLKPSNILLDENGRT-KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D R +L D+GLA + + + + PEL +
Sbjct: 149 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY------NVRVASRYFKGPELLVDLQ 202
Query: 178 VHSYASDLWGLGCVLYE-CYAGRPPFVGRE-FTQLVK 212
+ Y+ D+W LGC+ + P F G + QLVK
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 239
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDH-PNVLR 60
+ Y + +GRGKYS V++G E IK + +K K+ +E+++L +L PN+++
Sbjct: 52 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVK 111
Query: 61 FYSWY--ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S L+ EY D L L + IR +L++AL Y HS+GI+
Sbjct: 112 LLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIM 168
Query: 119 YCDLKPSNILLDENGRT-KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D R +L D+GLA + + + + PEL +
Sbjct: 169 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY------NVRVASRYFKGPELLVDLQ 222
Query: 178 VHSYASDLWGLGCVLYE-CYAGRPPFVGRE-FTQLVK 212
+ Y+ D+W LGC+ + P F G + QLVK
Sbjct: 223 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 259
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 12/143 (8%)
Query: 73 LVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLD-E 131
LV E+ D L + L + IR ++++AL Y HS GI++ D+KP N+++D E
Sbjct: 111 LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 132 NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCV 191
+ + +L D+GLA + + + + PEL + ++ Y+ D+W LGC+
Sbjct: 168 HRKLRLIDWGLAEFYHPGQEY------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 221
Query: 192 LYECYAGRPPFV-GRE-FTQLVK 212
L + PF G + + QLV+
Sbjct: 222 LASMIFRKEPFFHGHDNYDQLVR 244
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 12/143 (8%)
Query: 73 LVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLD-E 131
LV E+ D L + L + IR ++++AL Y HS GI++ D+KP N+++D E
Sbjct: 116 LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 172
Query: 132 NGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCV 191
+ + +L D+GLA + + + + PEL + ++ Y+ D+W LGC+
Sbjct: 173 HRKLRLIDWGLAEFYHPGQEY------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 226
Query: 192 LYECYAGRPPFV-GRE-FTQLVK 212
L + PF G + + QLV+
Sbjct: 227 LASMIFRKEPFFHGHDNYDQLVR 249
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDH-PNVLR 60
+ Y + +GRGKYS V++G E IK + +K K+ +E+++L +L PN+++
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVK 90
Query: 61 FYSWY--ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S L+ EY D L L + IR +L++AL Y HS+GI+
Sbjct: 91 LLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIM 147
Query: 119 YCDLKPSNILLDENGRT-KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D R +L D+GLA + + + + PEL +
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY------NVRVASRYFKGPELLVDLQ 201
Query: 178 VHSYASDLWGLGCVLYE-CYAGRPPFVGRE-FTQLVK 212
+ Y+ D+W LGC+ + P F G + QLVK
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+ +Y + IG G V AIK + +++ + +E+ ++ ++H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 56 PNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
N++ + + E ++LV+E + +L +++ +L + + L ++ +
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQM--ELDHERMSYLLYQMLCGI 140
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
++LHS GII+ DLKPSNI++ + K+ DFGLAR A +S + T Y A
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRA 194
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
PE+ G + D+W +GC++ E + F GR++
Sbjct: 195 PEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDY 231
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+ +Y + IG G V AIK + +++ + +E+ ++ ++H
Sbjct: 22 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 56 PNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
N++ + + E ++LV+E + +L +++ +L + + L ++ +
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQM--ELDHERMSYLLYQMLCGI 138
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
++LHS GII+ DLKPSNI++ + K+ DFGLAR A +S + T Y A
Sbjct: 139 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRA 192
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
PE+ G + D+W +GC++ E + F GR++
Sbjct: 193 PEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDY 229
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDH-PNVLR 60
+ Y + +GRGKYS V++G E IK + +K K+ +E+++L +L PN+++
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVK 90
Query: 61 FYSWY--ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S L+ EY D L L + IR +L++AL Y HS+GI+
Sbjct: 91 LLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQGIM 147
Query: 119 YCDLKPSNILLDENGRT-KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D R +L D+GLA + + + + PEL +
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY------NVRVASRYFKGPELLVDLQ 201
Query: 178 VHSYASDLWGLGCVLYE-CYAGRPPFVGRE-FTQLVK 212
+ Y+ D+W LGC+ + P F G + QLVK
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+ +Y + IG G V AIK + +++ + +E+ ++ ++H
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 56 PNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
N++ + + E ++LV+E + +L +++ +L + + L ++ +
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQM--ELDHERMSYLLYQMLCGI 177
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
++LHS GII+ DLKPSNI++ + K+ DFGLAR A +S + T Y A
Sbjct: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRA 231
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
PE+ G + D+W +GC++ E + F GR++
Sbjct: 232 PEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDY 268
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+ +Y + IG G V AIK + +++ + +E+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 56 PNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
N++ + + E ++LV+E + +L +++ +L + + L ++ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
++LHS GII+ DLKPSNI++ + K+ DFGLAR A +S + T Y A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRA 193
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
PE+ G + D+W +GC++ E + F GR++
Sbjct: 194 PEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+ +Y + IG G V AIK + +++ + +E+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 56 PNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
N++ + + E ++LV+E + +L +++ +L + + L ++ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
++LHS GII+ DLKPSNI++ + K+ DFGLAR A +S + T Y A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRA 193
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
PE+ G + D+W +GC++ E + F GR++
Sbjct: 194 PEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+ +Y + IG G V AIK + +++ + +E+ ++ ++H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 56 PNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
N++ + + E ++LV+E + +L +++ +L + + L ++ +
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQM--ELDHERMSYLLYQMLCGI 140
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
++LHS GII+ DLKPSNI++ + K+ DFGLAR A +S + T Y A
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRA 194
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
PE+ G + D+W +GC++ E + F GR++
Sbjct: 195 PEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDY 231
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+ +Y + IG G V AIK + +++ + +E+ ++ ++H
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 56 PNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
N++ + + E ++LV+E + +L +++ +L + + L ++ +
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQM--ELDHERMSYLLYQMLCGI 132
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
++LHS GII+ DLKPSNI++ + K+ DFGLAR A +S + T Y A
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRA 186
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
PE+ G + D+W +GC++ E + F GR++
Sbjct: 187 PEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDY 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+ +Y + IG G V AIK + +++ + +E+ ++ ++H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 56 PNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
N++ + + E ++LV+E + +L +++ +L + + L ++ +
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQM--ELDHERMSYLLYQMLCGI 133
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
++LHS GII+ DLKPSNI++ + K+ DFGLAR A +S + T Y A
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRA 187
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
PE+ G + D+W +GC++ E + F GR++
Sbjct: 188 PEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDY 224
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL-DHPNVLR 60
+ Y + +GRGKYS V++G E IK + +K K+ +E+++L +L PN+++
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVK 91
Query: 61 FYSWY--ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S L+ EY D L L + IR +L++AL Y HS+GI+
Sbjct: 92 LLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIM 148
Query: 119 YCDLKPSNILLDENGRT-KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D R +L D+GLA + + + + PEL +
Sbjct: 149 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY------NVRVASRYFKGPELLVDLQ 202
Query: 178 VHSYASDLWGLGCVLYE-CYAGRPPFVGRE-FTQLVK 212
+ Y+ D+W LGC+ + P F G + QLVK
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 239
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDH-PNVLR 60
+ Y + +GRGKYS V++G E IK + +K K+ +E+++L +L PN+++
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVK 90
Query: 61 FYSWY--ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S L+ EY D L L + IR +L++AL Y HS+GI+
Sbjct: 91 LLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQGIM 147
Query: 119 YCDLKPSNILLDENGRT-KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D R +L D+GLA + + + + PEL +
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY------NVRVASRYFKGPELLVDLQ 201
Query: 178 VHSYASDLWGLGCVLYE-CYAGRPPFVGRE-FTQLVK 212
+ Y+ D+W LGC+ + P F G + QLVK
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 42/226 (18%)
Query: 10 IGRGKYSTVYKGR-----KKKTIEYFAIKSVDK----SQKSKVLQEVRML-HSLDHPNVL 59
+GRG + V + K T A+K + + S+ ++ E+++L H H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 60 RFY-SWYETSAHLWLVLEYCVGGDLMSLLR--QDNQLPEDSIRDLAQDLV---------- 106
+ + L +++E+C G+L + LR ++ +P +DL +D +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP---YKDLYKDFLTLEHLICYSF 151
Query: 107 ---RALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKL---SDASKAPSSMLPQA 160
+ +++L S+ I+ DL NILL E K+CDFGLAR + D + + LP
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 161 KCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG 204
+MAPE +F+ V++ SD+W G +L+E ++ G P+ G
Sbjct: 212 ------WMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPG 249
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL-DHPNVLR 60
+ Y + +GRGKYS V++G E IK + +K K+ +E+++L +L PN+++
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLMGGPNIVK 90
Query: 61 FYSWY--ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S L+ EY D L L + IR +L++AL Y HS+GI+
Sbjct: 91 LLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQGIM 147
Query: 119 YCDLKPSNILLDENGRT-KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D R +L D+GLA + + + + PEL +
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY------NVRVASRYFKGPELLVDLQ 201
Query: 178 VHSYASDLWGLGCVLYE-CYAGRPPFVGRE-FTQLVK 212
+ Y+ D+W LGC+ + P F G + QLVK
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 23/211 (10%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHS--LDHPNVLR 60
Q + E +G+G+Y V++G E A+K + +E + ++ L H N+L
Sbjct: 9 QVALVECVGKGRYGEVWRGLWHG--ESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILG 66
Query: 61 FYSWYET----SAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSK- 115
F + T S LWL+ Y G L L++ P ++R LA L +LH +
Sbjct: 67 FIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALR-LAVSAACGLAHLHVEI 125
Query: 116 -------GIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYM 168
I + D K N+L+ N + + D GLA S S + + GT YM
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDY-LDIGNNPRVGTKRYM 184
Query: 169 APELFEE----GGVHSYA-SDLWGLGCVLYE 194
APE+ +E SY +D+W G VL+E
Sbjct: 185 APEVLDEQIRTDCFESYKWTDIWAFGLVLWE 215
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+ +Y + IG G V AIK + +++ + +E+ ++ ++H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 56 PNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
N++ + + E ++LV+E + +L +++ +L + + L ++ +
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQM--ELDHERMSYLLYQMLCGI 133
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
++LHS GII+ DLKPSNI++ + K+ DFGLAR A +S + T Y A
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRA 187
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
PE+ G + D+W +GC++ E + F GR++
Sbjct: 188 PEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDY 224
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL-DHPNVLR 60
+ Y + +GRGKYS V++G E IK + +K K+ +E+++L +L PN+++
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVK 90
Query: 61 FYSWY--ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S L+ EY D L L + IR +L++AL Y HS+GI+
Sbjct: 91 LLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQGIM 147
Query: 119 YCDLKPSNILLDENGRT-KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D R +L D+GLA + + + + PEL +
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY------NVRVASRYFKGPELLVDLQ 201
Query: 178 VHSYASDLWGLGCVLYE-CYAGRPPFVGRE-FTQLVK 212
+ Y+ D+W LGC+ + P F G + QLVK
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL-DHPNVLR 60
+ Y + +GRGKYS V++G E IK + +K K+ +E+++L +L PN+++
Sbjct: 33 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVK 92
Query: 61 FYSWY--ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S L+ EY D L L + IR +L++AL Y HS+GI+
Sbjct: 93 LLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIM 149
Query: 119 YCDLKPSNILLDENGRT-KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D R +L D+GLA + + + + PEL +
Sbjct: 150 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY------NVRVASRYFKGPELLVDLQ 203
Query: 178 VHSYASDLWGLGCVLYE-CYAGRPPFVGRE-FTQLVK 212
+ Y+ D+W LGC+ + P F G + QLVK
Sbjct: 204 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 240
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 26/207 (12%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V+EY G L+ L+ + +LP+ + D+A + + Y+ ++ DL+
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPE--LFEEGGV 178
+NIL+ EN K+ DFGLAR + D A+ G + APE L+ G
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEXT-------ARQGAKFPIKWTAPEAALY---GR 191
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVG 204
+ SD+W G +L E GR P+ G
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+ +Y + IG G V AIK + +++ + +E+ ++ ++H
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 56 PNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
N++ + + E ++LV+E + +L +++ +L + + L ++ +
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQM--ELDHERMSYLLYQMLCGI 177
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
++LHS GII+ DLKPSNI++ + K+ DFGLAR A +S + T Y A
Sbjct: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRA 231
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
PE+ G + D+W +GC++ E + F GR++
Sbjct: 232 PEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDY 268
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+ +Y + IG G V AIK + +++ + +E+ ++ ++H
Sbjct: 28 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 56 PNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
N++ + + E +++V+E + +L +++ +L + + L ++ +
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQM--ELDHERMSYLLYQMLCGI 144
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
++LHS GII+ DLKPSNI++ + K+ DFGLAR A +S + T Y A
Sbjct: 145 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRA 198
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
PE+ G + DLW +GC++ E + F GR++
Sbjct: 199 PEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDY 235
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+ +Y + IG G V AIK + +++ + +E+ ++ ++H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 56 PNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
N++ + + E +++V+E + +L +++ +L + + L ++ +
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQM--ELDHERMSYLLYQMLCGI 133
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
++LHS GII+ DLKPSNI++ + K+ DFGLAR A +S + T Y A
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRA 187
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREF 207
PE+ G + DLW +GC++ E + F GR++
Sbjct: 188 PEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDY 224
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 81/185 (43%), Gaps = 20/185 (10%)
Query: 31 AIKSVDKSQKS---------KVLQEVRMLHSLD--HPNVLRFYSWYETSAHLWLVLEYCV 79
AIK V+K + S +V EV +L + V+R W+E L+LE
Sbjct: 80 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 139
Query: 80 G-GDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDEN-GRTKL 137
DL + + L E+ R ++ A+++ H+ G+++ D+K NIL+D N G KL
Sbjct: 140 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 199
Query: 138 CDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYA 197
DFG L D GT Y PE H ++ +W LG +LY+
Sbjct: 200 IDFGSGALLKDTVYTDFD-------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 252
Query: 198 GRPPF 202
G PF
Sbjct: 253 GDIPF 257
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL-DHPNVLR 60
+ Y + +GRGKYS V++G E IK + +K K+ +E+++L +L PN+++
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVK 90
Query: 61 FYSWY--ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGII 118
+ S L+ EY D L L + IR +L++AL Y HS+GI+
Sbjct: 91 LLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIM 147
Query: 119 YCDLKPSNILLDENGRT-KLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGG 177
+ D+KP N+++D R +L D+GLA + + + + PEL +
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY------NVRVASRYFKGPELLVDLQ 201
Query: 178 VHSYASDLWGLGCVLYE-CYAGRPPFVGRE-FTQLVK 212
+ Y+ D+W LGC+ + P F G + QLVK
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 38/237 (16%)
Query: 8 EAIGRGKYSTVYKGR-----KKKTIEYFAIKSVDKSQKSKVLQEVR---MLHS-LDHPNV 58
E +G ++ VYKG + + AIK++ + + +E R ML + L HPNV
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 59 LRFYSWYETSAHLWLVLEYCVGGDLMSLL-----------RQDNQL------PEDSIRDL 101
+ L ++ YC GDL L D++ P D + +
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 102 AQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAP---SSMLP 158
AQ + ++YL S +++ DL N+L+ + K+ D GL R++ A +S+LP
Sbjct: 152 AQ-IAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 159 QAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
+MAPE G S SD+W G VL+E ++ G P+ G +V+ I
Sbjct: 211 IR------WMAPEAIMYGKF-SIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 260
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V EY G L+ L+ + +LP+ + D+A + + Y+ ++ DL+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLR 307
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPE--LFEEGGV 178
+NIL+ EN K+ DFGLAR + D A+ G + APE L+ G
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAALY---GR 357
Query: 179 HSYASDLWGLGCVLYE-CYAGRPPFVG 204
+ SD+W G +L E GR P+ G
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V+EY G L+ L+ + +LP+ + D+A + + Y+ ++ DL+
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE--LFEEGGVHSY 181
+NIL+ EN K+ DFGLAR + D Q + APE L+ G +
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTAR----QGAKFPIKWTAPEAALY---GRFTI 194
Query: 182 ASDLWGLGCVLYECYA-GRPPFVG 204
SD+W G +L E GR P+ G
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 36 DKSQKSKVLQEVRMLHSLDHPNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQ 89
+++ + +E+ ++ ++H N++ + + E +++V+E + +L +++
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQM 121
Query: 90 DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDA 149
+L + + L ++ +++LHS GII+ DLKPSNI++ + K+ DFGLAR
Sbjct: 122 --ELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----- 174
Query: 150 SKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE 206
A +S + T Y APE+ G + D+W +GC++ E G F G +
Sbjct: 175 -TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G K ++ AIK+V+++ ++ + L E ++ + +V+R
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDS----------IRDLAQDLVRALQ 110
+++E GDL S LR E++ + +A ++ +
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++ ++ DL N ++ E+ K+ DFG+ R + + K +LP +
Sbjct: 138 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR------W 191
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
M+PE ++G +Y SD+W G VL+E P+ G Q+++ ++
Sbjct: 192 MSPESLKDGVFTTY-SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 239
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V EY G L+ L+ + +LP+ + D+A + + Y+ ++ DL+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLR 307
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPE--LFEEGGV 178
+NIL+ EN K+ DFGLAR + D A+ G + APE L+ G
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAALY---GR 357
Query: 179 HSYASDLWGLGCVLYE-CYAGRPPFVG 204
+ SD+W G +L E GR P+ G
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 19 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 76
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V EY G L+ L+ + +LP+ + D+A + + Y+ ++ DL+
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLR 134
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE--LFEEGGVHSY 181
+NIL+ EN K+ DFGLAR + D Q + APE L+ G +
Sbjct: 135 AANILVGENLVCKVADFGLARLIEDNEYTAR----QGAKFPIKWTAPEAALY---GRFTI 187
Query: 182 ASDLWGLGCVLYECYA-GRPPFVG 204
SD+W G +L E GR P+ G
Sbjct: 188 KSDVWSFGILLTELTTKGRVPYPG 211
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 275 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 332
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V EY G L+ L+ + +LP+ + D+A + + Y+ ++ DL+
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLR 390
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE--LFEEGGVHS 180
+NIL+ EN K+ DFGLAR + D + + P + APE L+ G +
Sbjct: 391 AANILVGENLVCKVADFGLARLIED-----NEYTARQGAKFPIKWTAPEAALY---GRFT 442
Query: 181 YASDLWGLGCVLYE-CYAGRPPFVG 204
SD+W G +L E GR P+ G
Sbjct: 443 IKSDVWSFGILLTELTTKGRVPYPG 467
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 93 LPEDSIRDLAQDLVRALQYLHS-KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASK 151
+P I+ + + ++ + Y+H+ K I + D+KPSNIL+D+NGR KL DFG + + D
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI 207
Query: 152 APSSMLPQAKCGTPCYMAPELFE-EGGVHSYASDLWGLGCVLYECYAGRPPF 202
S GT +M PE F E + D+W LG LY + PF
Sbjct: 208 KGSR-------GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 38/237 (16%)
Query: 8 EAIGRGKYSTVYKGR-----KKKTIEYFAIKSVDKSQKSKVLQEVR---MLHS-LDHPNV 58
E +G ++ VYKG + + AIK++ + + +E R ML + L HPNV
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 59 LRFYSWYETSAHLWLVLEYCVGGDLMSLL-----------RQDNQL------PEDSIRDL 101
+ L ++ YC GDL L D++ P D + +
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 102 AQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAP---SSMLP 158
AQ + ++YL S +++ DL N+L+ + K+ D GL R++ A +S+LP
Sbjct: 135 AQ-IAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 159 QAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
+MAPE G S SD+W G VL+E ++ G P+ G +V+ I
Sbjct: 194 IR------WMAPEAIMYGKF-SIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 243
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G K ++ AIK+V+++ ++ + L E ++ + +V+R
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDS----------IRDLAQDLVRALQ 110
+++E GDL S LR E++ + +A ++ +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++ ++ DL N ++ E+ K+ DFG+ R + + K +LP +
Sbjct: 147 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR------W 200
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
M+PE ++G +Y SD+W G VL+E P+ G Q+++ ++
Sbjct: 201 MSPESLKDGVFTTY-SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 248
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 8 EAIGRGKYST-VYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLD-HPNVLRFYSWY 65
+ +G G T VY+G A+K + S +EV++L D HPNV+R++
Sbjct: 30 DVLGHGAEGTIVYRGMFDN--RDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTE 87
Query: 66 ETSAHLWLVLEYCVGGDLMSLLRQDN--QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+ ++ +E C L + Q + L + I L Q L +LHS I++ DLK
Sbjct: 88 KDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPI-TLLQQTTSGLAHLHSLNIVHRDLK 145
Query: 124 PSNILL---DENGRTK--LCDFGLARKLSDASKAPS--SMLPQAKCGTPCYMAPELFEEG 176
P NIL+ + +G+ K + DFGL +KL+ + S S +P GT ++APE+ E
Sbjct: 146 PHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP----GTEGWIAPEMLSED 201
Query: 177 GVH--SYASDLWGLGCVLYECYA-GRPPF 202
+Y D++ GCV Y + G PF
Sbjct: 202 CKENPTYTVDIFSAGCVFYYVISEGSHPF 230
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G++ V+ K + A+K++ S L E ++ +L H +++ ++ T
Sbjct: 23 LGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVT 80
Query: 68 SAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPS 125
++++ E+ G L+ L+ D ++ P + D + + + ++ + I+ DL+ +
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAA 140
Query: 126 NILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEEGGVHSYASD 184
NIL+ + K+ DFGLAR + D + + P + APE G + SD
Sbjct: 141 NILVSASLVCKIADFGLARVIED-----NEYTAREGAKFPIKWTAPEAINFGSF-TIKSD 194
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
+W G +L E GR P+ G ++++++
Sbjct: 195 VWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 225
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 14/202 (6%)
Query: 10 IGRGKYSTVYKG---RKKKTIEYFAIK----SVDKSQKSKVLQEVRMLHSLDHPNVLRFY 62
+G G + +V +G +KK I+ AIK +K+ ++++E +++H LD+P ++R
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQID-VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLL-RQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCD 121
+ A L LV+E GG L L + ++P ++ +L + ++YL K ++ D
Sbjct: 77 GVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRD 135
Query: 122 LKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSY 181
L N+LL K+ DFGL++ L A + + K Y APE S
Sbjct: 136 LAARNVLLVNRHYAKISDFGLSKALG-ADDSYYTARSAGKWPLKWY-APECINFRKFSS- 192
Query: 182 ASDLWGLGCVLYECYA-GRPPF 202
SD+W G ++E + G+ P+
Sbjct: 193 RSDVWSYGVTMWEALSYGQKPY 214
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V EY G L+ L+ + +LP+ + D+A + + Y+ ++ DL+
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLR 307
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPE--LFEEGGV 178
+NIL+ EN K+ DFGLAR + D A+ G + APE L+ G
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAALY---GR 357
Query: 179 HSYASDLWGLGCVLYE-CYAGRPPFVG 204
+ SD+W G +L E GR P+ G
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 29/220 (13%)
Query: 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV---DKSQKSKVLQ-------EVRMLH 51
N+ + IG+G + V+KGR K AIKS+ D ++++++ EV ++
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 52 SLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIR-DLAQDLVRALQ 110
+L+HPN+++ Y +V+E+ GDL L + S++ L D+ ++
Sbjct: 79 NLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 111 YLHSKG--IIYCDLKPSNIL---LDENGRT--KLCDFGLARKLSDASKAPSSMLPQAKCG 163
Y+ ++ I++ DL+ NI LDEN K+ DFGL+++ + + S +L G
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ---SVHSVSGLL-----G 188
Query: 164 TPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
+MAPE + E ++ +D + +LY G PF
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 34/232 (14%)
Query: 9 AIGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRML-HSLDHPNVLRFYS 63
A G+ +T + K+ + A+K + +K ++ E++++ H H N++
Sbjct: 58 AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 117
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQD-----------NQLPEDSI--RDL---AQDLVR 107
+ ++ EYC GDL++ LR+ + PE+ + RDL + + +
Sbjct: 118 ACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQ 177
Query: 108 ALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC- 166
+ +L SK I+ D+ N+LL K+ DFGLAR + + S+ + + P
Sbjct: 178 GMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN----DSNYIVKGNARLPVK 233
Query: 167 YMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG----REFTQLVK 212
+MAPE +F+ V++ SD+W G +L+E ++ G P+ G +F +LVK
Sbjct: 234 WMAPESIFD--CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 283
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 36 DKSQKSKVLQEVRMLHSLDHPNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQ 89
+++ + +E+ ++ ++H N++ + + E +++V+E + +L +++
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQM 121
Query: 90 DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDA 149
+L + + L ++ +++LHS GII+ DLKPSNI++ + K+ DFGLAR
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----- 174
Query: 150 SKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE 206
A +S + T Y APE+ G + D+W +GC++ E G F G +
Sbjct: 175 -TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 15 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 72
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V EY G L+ L+ + +LP+ + D+A + + Y+ ++ DL+
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLR 130
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE--LFEEGGVHSY 181
+NIL+ EN K+ DFGLAR + D Q + APE L+ G +
Sbjct: 131 AANILVGENLVCKVADFGLARLIEDNEYTAR----QGAKFPIKWTAPEAALY---GRFTI 183
Query: 182 ASDLWGLGCVLYECYA-GRPPFVG 204
SD+W G +L E GR P+ G
Sbjct: 184 KSDVWSFGILLTELTTKGRVPYPG 207
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 17 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 74
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V EY G L+ L+ + +LP+ + D+A + + Y+ ++ DL+
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLR 132
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE--LFEEGGVHSY 181
+NIL+ EN K+ DFGLAR + D Q + APE L+ G +
Sbjct: 133 AANILVGENLVCKVADFGLARLIEDNEYTAR----QGAKFPIKWTAPEAALY---GRFTI 185
Query: 182 ASDLWGLGCVLYECYA-GRPPFVG 204
SD+W G +L E GR P+ G
Sbjct: 186 KSDVWSFGILLTELTTKGRVPYPG 209
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V+EY G L+ L+ + +LP+ + D+A + + Y+ ++ DL+
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE--LFEEGGVHSY 181
+NIL+ EN K+ DFGLAR + D Q + APE L+ G +
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTAR----QGAKFPIKWTAPEAALY---GRFTI 194
Query: 182 ASDLWGLGCVLYECYA-GRPPFVG 204
SD+W G +L E GR P+ G
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V EY G L+ L+ + +LP+ + D+A + + Y+ ++ DL+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPE--LFEEGGV 178
+NIL+ EN K+ DFGLAR + D A+ G + APE L+ G
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAALY---GR 191
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVG 204
+ SD+W G +L E GR P+ G
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 16 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 73
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+ +V EY G L+ L+ + +LP+ + D+A + + Y+ ++ DL+
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLR 131
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE--LFEEGGVHSY 181
+NIL+ EN K+ DFGLAR + D Q + APE L+ G +
Sbjct: 132 AANILVGENLVCKVADFGLARLIEDNEXTAR----QGAKFPIKWTAPEAALY---GRFTI 184
Query: 182 ASDLWGLGCVLYECYA-GRPPFVG 204
SD+W G +L E GR P+ G
Sbjct: 185 KSDVWSFGILLTELTTKGRVPYPG 208
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 89/177 (50%), Gaps = 16/177 (9%)
Query: 36 DKSQKSKVLQEVRMLHSLDHPNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQ 89
+++ + +E+ +L ++H N++ + + E ++LV+E + +L ++
Sbjct: 61 NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIHM 119
Query: 90 DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDA 149
+L + + L ++ +++LHS GII+ DLKPSNI++ + K+ DFGLAR
Sbjct: 120 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----- 172
Query: 150 SKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE 206
A ++ + T Y APE+ G + D+W +GC++ E G F G +
Sbjct: 173 -TASTNFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTD 227
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 36 DKSQKSKVLQEVRMLHSLDHPNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQ 89
+++ + +E+ ++ ++H N++ + + E +++V+E + +L +++
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQM 121
Query: 90 DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDA 149
+L + + L ++ +++LHS GII+ DLKPSNI++ + K+ DFGLAR
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----- 174
Query: 150 SKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE 206
A +S + T Y APE+ G + D+W +GC++ E G F G +
Sbjct: 175 -TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 12/210 (5%)
Query: 10 IGRGKYSTVYKGRKK-------KTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFY 62
+G G + TV KG + ++ ++ D + K ++L E ++ LD+P ++R
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDL 122
E + + LV+E G L L+Q+ + + +I +L + ++YL ++ DL
Sbjct: 437 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 495
Query: 123 KPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA 182
N+LL K+ DFGL++ L A + K Y APE S
Sbjct: 496 AARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWPVKWY-APECINYYKFSS-K 552
Query: 183 SDLWGLGCVLYECYA-GRPPFVGREFTQLV 211
SD+W G +++E ++ G+ P+ G + +++
Sbjct: 553 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 582
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 20/245 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V EY G L+ L+ + +LP+ + D+A + + Y+ ++ DL+
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE--LFEEGGVHSY 181
+NIL+ EN K+ DFGLAR + D Q + APE L+ G +
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTAR----QGAKFPIKWTAPEAALY---GRFTI 194
Query: 182 ASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVK 240
SD+W G +L E GR P+ G +++ + +L+ K
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 254
Query: 241 DPAQR 245
DP +R
Sbjct: 255 DPEER 259
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAI-------KSVDKSQKSKVLQEVRMLHSLDHPNVLRFY 62
+G G + TV KG + + ++ D + K ++L E ++ LD+P ++R
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDL 122
E + + LV+E G L L+Q+ + + +I +L + ++YL ++ DL
Sbjct: 79 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 137
Query: 123 KPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA 182
N+LL K+ DFGL++ L A + K Y APE S
Sbjct: 138 AARNVLLVTQHYAKISDFGLSKALR-ADENXYKAQTHGKWPVKWY-APECINYYKFSS-K 194
Query: 183 SDLWGLGCVLYECYA-GRPPFVGREFTQLV 211
SD+W G +++E ++ G+ P+ G + +++
Sbjct: 195 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G K ++ AIK+V+++ ++ + L E ++ + +V+R
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDS----------IRDLAQDLVRALQ 110
+++E GDL S LR E++ + +A ++ +
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++ ++ DL N ++ E+ K+ DFG+ R + + K +LP +
Sbjct: 144 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------W 197
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
M+PE ++G +Y SD+W G VL+E P+ G Q+++ ++
Sbjct: 198 MSPESLKDGVFTTY-SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 245
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G K ++ AIK+V+++ ++ + L E ++ + +V+R
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDS----------IRDLAQDLVRALQ 110
+++E GDL S LR E++ + +A ++ +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++ ++ DL N ++ E+ K+ DFG+ R + + K +LP +
Sbjct: 146 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------W 199
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
M+PE ++G +Y SD+W G VL+E P+ G Q+++ ++
Sbjct: 200 MSPESLKDGVFTTY-SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 247
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 47/224 (20%)
Query: 11 GRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYETSAH 70
GR Y+TV K+ + S+ +L E +L ++HP+V++ Y
Sbjct: 49 GRAGYTTVAVKMLKE--------NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100
Query: 71 LWLVLEYCVGGDLMSLLRQDNQL------------------PED---SIRDL---AQDLV 106
L L++EY G L LR+ ++ P++ ++ DL A +
Sbjct: 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS 160
Query: 107 RALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC 166
+ +QYL +++ DL NIL+ E + K+ DFGL+R + + S + +++ P
Sbjct: 161 QGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE----DSXVKRSQGRIPV 216
Query: 167 -YMAPE-LFEEGGVHSYASDLWGLGCVLYEC-------YAGRPP 201
+MA E LF+ +++ SD+W G +L+E Y G PP
Sbjct: 217 KWMAIESLFDH--IYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+ +Y + IG G V AIK + +++ + +E+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 56 PNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
N++ + + E +++V+E + +L +++ +L + + L ++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
++LHS GII+ DLKPSNI++ + K+ DFGLAR A +S + + T Y A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPEVVTRYYRA 193
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE 206
PE+ G + D+W +GC++ E G F G +
Sbjct: 194 PEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G K ++ AIK+V+++ ++ + L E ++ + +V+R
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDS----------IRDLAQDLVRALQ 110
+++E GDL S LR E++ + +A ++ +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++ ++ DL N ++ E+ K+ DFG+ R + + K +LP +
Sbjct: 140 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------W 193
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
M+PE ++G +Y SD+W G VL+E P+ G Q+++ ++
Sbjct: 194 MSPESLKDGVFTTY-SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 241
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G K ++ AIK+V+++ ++ + L E ++ + +V+R
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDS----------IRDLAQDLVRALQ 110
+++E GDL S LR E++ + +A ++ +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++ ++ DL N ++ E+ K+ DFG+ R + + K +LP +
Sbjct: 146 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------W 199
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
M+PE ++G +Y SD+W G VL+E P+ G Q+++ ++
Sbjct: 200 MSPESLKDGVFTTY-SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 247
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 12/210 (5%)
Query: 10 IGRGKYSTVYKGRKK-------KTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFY 62
+G G + TV KG + ++ ++ D + K ++L E ++ LD+P ++R
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDL 122
E + + LV+E G L L+Q+ + + +I +L + ++YL ++ DL
Sbjct: 438 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 496
Query: 123 KPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA 182
N+LL K+ DFGL++ L A + K Y APE S
Sbjct: 497 AARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWPVKWY-APECINYYKFSS-K 553
Query: 183 SDLWGLGCVLYECYA-GRPPFVGREFTQLV 211
SD+W G +++E ++ G+ P+ G + +++
Sbjct: 554 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 583
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAI-------KSVDKSQKSKVLQEVRMLHSLDHPNVLRFY 62
+G G + TV KG + + ++ D + K ++L E ++ LD+P ++R
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDL 122
E + + LV+E G L L+Q+ + + +I +L + ++YL ++ DL
Sbjct: 85 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 143
Query: 123 KPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA 182
N+LL K+ DFGL++ L A + K Y APE S
Sbjct: 144 AARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWPVKWY-APECINYYKFSS-K 200
Query: 183 SDLWGLGCVLYECYA-GRPPFVGREFTQLV 211
SD+W G +++E ++ G+ P+ G + +++
Sbjct: 201 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 230
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 80
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V EY G L+ L+ + +LP+ + D++ + + Y+ ++ DL+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQ--LVDMSAQIASGMAYVERMNYVHRDLR 138
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPE--LFEEGGVHS 180
+NIL+ EN K+ DFGLAR + D + + P + APE L+ G +
Sbjct: 139 AANILVGENLVCKVADFGLARLIED-----NEWTARQGAKFPIKWTAPEAALY---GRFT 190
Query: 181 YASDLWGLGCVLYECYA-GRPPFVG 204
SD+W G +L E GR P+ G
Sbjct: 191 IKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAI-------KSVDKSQKSKVLQEVRMLHSLDHPNVLRFY 62
+G G + TV KG + + ++ D + K ++L E ++ LD+P ++R
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDL 122
E + + LV+E G L L+Q+ + + +I +L + ++YL ++ DL
Sbjct: 95 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 153
Query: 123 KPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA 182
N+LL K+ DFGL++ L A + K Y APE S
Sbjct: 154 AARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWPVKWY-APECINYYKFSS-K 210
Query: 183 SDLWGLGCVLYECYA-GRPPFVGREFTQLV 211
SD+W G +++E ++ G+ P+ G + +++
Sbjct: 211 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAI-------KSVDKSQKSKVLQEVRMLHSLDHPNVLRFY 62
+G G + TV KG + + ++ D + K ++L E ++ LD+P ++R
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDL 122
E + + LV+E G L L+Q+ + + +I +L + ++YL ++ DL
Sbjct: 95 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 153
Query: 123 KPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA 182
N+LL K+ DFGL++ L A + K Y APE S
Sbjct: 154 AARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWPVKWY-APECINYYKFSS-K 210
Query: 183 SDLWGLGCVLYECYA-GRPPFVGREFTQLV 211
SD+W G +++E ++ G+ P+ G + +++
Sbjct: 211 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 80
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V EY G L+ L+ + +LP+ + D++ + + Y+ ++ DL+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQ--LVDMSAQIASGMAYVERMNYVHRDLR 138
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPE--LFEEGGV 178
+NIL+ EN K+ DFGLAR + D A+ G + APE L+ G
Sbjct: 139 AANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAALY---GR 188
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVG 204
+ SD+W G +L E GR P+ G
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 26/201 (12%)
Query: 10 IGRGKYSTV----YKGRKKKTIEYFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLRF 61
+G G + V Y T E A+K++ +S QE+ +L +L H +++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 62 YSWYETSAH--LWLVLEYCVGGDLMSLLRQDNQLPEDSIRD-----LAQDLVRALQYLHS 114
E L LV+EY G L + LP SI AQ + + YLHS
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLR------DYLPRHSIGLAQLLLFAQQICEGMAYLHS 135
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELF 173
+ I+ +L N+LLD + K+ DFGLA+ + + + + +P + APE
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV---REDGDSPVFWYAPECL 192
Query: 174 EEGGVHSYASDLWGLGCVLYE 194
+E + YASD+W G LYE
Sbjct: 193 KEYKFY-YASDVWSFGVTLYE 212
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 47/224 (20%)
Query: 11 GRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYETSAH 70
GR Y+TV K+ + S+ +L E +L ++HP+V++ Y
Sbjct: 49 GRAGYTTVAVKMLKE--------NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100
Query: 71 LWLVLEYCVGGDLMSLLRQDNQL------------------PED---SIRDL---AQDLV 106
L L++EY G L LR+ ++ P++ ++ DL A +
Sbjct: 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS 160
Query: 107 RALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC 166
+ +QYL +++ DL NIL+ E + K+ DFGL+R + + S + +++ P
Sbjct: 161 QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE----DSXVKRSQGRIPV 216
Query: 167 -YMAPE-LFEEGGVHSYASDLWGLGCVLYEC-------YAGRPP 201
+MA E LF+ +++ SD+W G +L+E Y G PP
Sbjct: 217 KWMAIESLFDH--IYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAI-------KSVDKSQKSKVLQEVRMLHSLDHPNVLRFY 62
+G G + TV KG + + ++ D + K ++L E ++ LD+P ++R
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDL 122
E + + LV+E G L L+Q+ + + +I +L + ++YL ++ DL
Sbjct: 73 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 131
Query: 123 KPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA 182
N+LL K+ DFGL++ L A + K Y APE S
Sbjct: 132 AARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWPVKWY-APECINYYKFSS-K 188
Query: 183 SDLWGLGCVLYECYA-GRPPFVGREFTQLV 211
SD+W G +++E ++ G+ P+ G + +++
Sbjct: 189 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 218
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAI-------KSVDKSQKSKVLQEVRMLHSLDHPNVLRFY 62
+G G + TV KG + + ++ D + K ++L E ++ LD+P ++R
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDL 122
E + + LV+E G L L+Q+ + + +I +L + ++YL ++ DL
Sbjct: 93 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 151
Query: 123 KPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA 182
N+LL K+ DFGL++ L A + K Y APE S
Sbjct: 152 AARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWPVKWY-APECINYYKFSS-K 208
Query: 183 SDLWGLGCVLYECYA-GRPPFVGREFTQLV 211
SD+W G +++E ++ G+ P+ G + +++
Sbjct: 209 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 238
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAI-------KSVDKSQKSKVLQEVRMLHSLDHPNVLRFY 62
+G G + TV KG + + ++ D + K ++L E ++ LD+P ++R
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDL 122
E + + LV+E G L L+Q+ + + +I +L + ++YL ++ DL
Sbjct: 75 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 133
Query: 123 KPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA 182
N+LL K+ DFGL++ L A + K Y APE S
Sbjct: 134 AARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWPVKWY-APECINYYKFSS-K 190
Query: 183 SDLWGLGCVLYECYA-GRPPFVG 204
SD+W G +++E ++ G+ P+ G
Sbjct: 191 SDVWSFGVLMWEAFSYGQKPYRG 213
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 111/239 (46%), Gaps = 41/239 (17%)
Query: 9 AIGRGKYSTVYKGRKKKTIEYFAIK----SVDKSQKSKVLQEVRML-HSLDHPNVLRFYS 63
A G+ +T + K+ + A+K + +K ++ E++++ H H N++
Sbjct: 43 AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 102
Query: 64 WYETSAHLWLVLEYCVGGDLMSLLRQD-----------NQLPED---------SIRDL-- 101
+ ++ EYC GDL++ LR+ Q PE +RDL
Sbjct: 103 ACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLH 162
Query: 102 -AQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQA 160
+ + + + +L SK I+ D+ N+LL K+ DFGLAR + + S+ + +
Sbjct: 163 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN----DSNYIVKG 218
Query: 161 KCGTPC-YMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG----REFTQLVK 212
P +MAPE +F+ V++ SD+W G +L+E ++ G P+ G +F +LVK
Sbjct: 219 NARLPVKWMAPESIFD--CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 275
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 35/242 (14%)
Query: 3 QYHIYEAIGRGKYSTVYK----GRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSL----- 53
+Y I +G G + V + R + IK+V+K +++ L E+ +L +
Sbjct: 34 RYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARL-EINVLEKINEKDP 92
Query: 54 DHPNV-LRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPE--DSIRDLAQDLVRALQ 110
D+ N+ ++ + W++ H+ + E +G L+ +N LP +R +A L +A++
Sbjct: 93 DNKNLCVQMFDWFDYHGHMCISFE-LLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVK 151
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCG------- 163
+LH + + DLKP NIL N +L + L +K D S+ + G
Sbjct: 152 FLHDNKLTHTDLKPENILF-VNSDYELT-YNLEKK-RDERSVKSTAVRVVDFGSATFDHE 208
Query: 164 -------TPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFV---GREFTQLVKS 213
T Y APE+ E G S D+W +GC+++E Y G F RE +++
Sbjct: 209 HHSTIVSTRHYRAPEVILELGW-SQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMER 267
Query: 214 IL 215
IL
Sbjct: 268 IL 269
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 47/224 (20%)
Query: 11 GRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYETSAH 70
GR Y+TV K+ + S+ +L E +L ++HP+V++ Y
Sbjct: 49 GRAGYTTVAVKMLKE--------NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100
Query: 71 LWLVLEYCVGGDLMSLLRQDNQL------------------PED---SIRDL---AQDLV 106
L L++EY G L LR+ ++ P++ ++ DL A +
Sbjct: 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS 160
Query: 107 RALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC 166
+ +QYL +++ DL NIL+ E + K+ DFGL+R + + S + +++ P
Sbjct: 161 QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE----DSYVKRSQGRIPV 216
Query: 167 -YMAPE-LFEEGGVHSYASDLWGLGCVLYEC-------YAGRPP 201
+MA E LF+ +++ SD+W G +L+E Y G PP
Sbjct: 217 KWMAIESLFDH--IYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAI-------KSVDKSQKSKVLQEVRMLHSLDHPNVLRFY 62
+G G + TV KG + + ++ D + K ++L E ++ LD+P ++R
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 63 SWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDL 122
E + + LV+E G L L+Q+ + + +I +L + ++YL ++ DL
Sbjct: 79 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 137
Query: 123 KPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYA 182
N+LL K+ DFGL++ L A + K Y APE S
Sbjct: 138 AARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWPVKWY-APECINYYKFSS-K 194
Query: 183 SDLWGLGCVLYECYA-GRPPFVGREFTQLV 211
SD+W G +++E ++ G+ P+ G + +++
Sbjct: 195 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ + H +++ Y+ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYA-VVS 83
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V EY G L+ L+ + +LP+ + D+A + + Y+ ++ DL+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPE--LFEEGGV 178
+NIL+ EN K+ DFGLAR + D A+ G + APE L+ G
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAALY---GR 191
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVG 204
+ SD+W G +L E GR P+ G
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G K ++ AIK+V+++ ++ + L E ++ + +V+R
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDS----------IRDLAQDLVRALQ 110
+++E GDL S LR E++ + +A ++ +
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++ ++ DL N ++ E+ K+ DFG+ R + + K +LP +
Sbjct: 175 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------W 228
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
M+PE ++G +Y SD+W G VL+E P+ G Q+++ ++
Sbjct: 229 MSPESLKDGVFTTY-SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 276
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G G++ V+ K + A+K++ S L E ++ +L H +++ ++ T
Sbjct: 196 LGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVT 253
Query: 68 SAHLWLVLEYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPS 125
++++ E+ G L+ L+ D ++ P + D + + + ++ + I+ DL+ +
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAA 313
Query: 126 NILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC-YMAPELFEEGGVHSYASD 184
NIL+ + K+ DFGLAR + D + + P + APE G + SD
Sbjct: 314 NILVSASLVCKIADFGLARVIED-----NEYTAREGAKFPIKWTAPEAINFGSF-TIKSD 367
Query: 185 LWGLGCVLYECYA-GRPPFVGREFTQLVKSI 214
+W G +L E GR P+ G ++++++
Sbjct: 368 VWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 398
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G K ++ AIK+V+++ ++ + L E ++ + +V+R
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDS----------IRDLAQDLVRALQ 110
+++E GDL S LR E++ + +A ++ +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++ ++ DL N ++ E+ K+ DFG+ R + + K +LP +
Sbjct: 147 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------W 200
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
M+PE ++G +Y SD+W G VL+E P+ G Q+++ ++
Sbjct: 201 MSPESLKDGVFTTY-SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 248
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G K ++ AIK+V+++ ++ + L E ++ + +V+R
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDS----------IRDLAQDLVRALQ 110
+++E GDL S LR E++ + +A ++ +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++ ++ DL N ++ E+ K+ DFG+ R + + K +LP +
Sbjct: 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------W 206
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
M+PE ++G +Y SD+W G VL+E P+ G Q+++ ++
Sbjct: 207 MSPESLKDGVFTTY-SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 254
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G K ++ AIK+V+++ ++ + L E ++ + +V+R
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLR-------QDNQLPEDSIRDLAQ---DLVRALQ 110
+++E GDL S LR + L S+ + Q ++ +
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++ ++ DL N ++ E+ K+ DFG+ R + + K +LP +
Sbjct: 143 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------W 196
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
M+PE ++G +Y SD+W G VL+E P+ G Q+++ ++
Sbjct: 197 MSPESLKDGVFTTY-SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 244
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V EY G L+ L+ + +LP+ + D+A + + Y+ ++ DL
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLA 141
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPE--LFEEGGV 178
+NIL+ EN K+ DFGLAR + D A+ G + APE L+ G
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAALY---GR 191
Query: 179 HSYASDLWGLGCVLYECYA-GRPPFVG 204
+ SD+W G +L E GR P+ G
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 193 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 250
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V EY G L+ L+ + +LP+ + D+A + + Y+ ++ DL+
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLR 308
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPC---YMAPE--LFEEGGV 178
+NIL+ EN K+ DFGL R + D A+ G + APE L+ G
Sbjct: 309 AANILVGENLVCKVADFGLGRLIEDNEYT-------ARQGAKFPIKWTAPEAALY---GR 358
Query: 179 HSYASDLWGLGCVLYE-CYAGRPPFVG 204
+ SD+W G +L E GR P+ G
Sbjct: 359 FTIKSDVWSFGILLTELTTKGRVPYPG 385
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 36 DKSQKSKVLQEVRMLHSLDHPNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQ 89
+++ + +E+ +L ++H N++ + + E ++LV+E + +L ++
Sbjct: 63 NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIHM 121
Query: 90 DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDA 149
+L + + L ++ +++LHS GII+ DLKPSNI++ + K+ DFGLAR
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----- 174
Query: 150 SKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE 206
A ++ + T Y APE+ G ++ D+W +GC++ E G F G +
Sbjct: 175 -TACTNFMMTPYVVTRYYRAPEVILGMG-YAANVDIWSVGCIMGELVKGCVIFQGTD 229
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 42/231 (18%)
Query: 3 QYHIYEAIGRGKYSTVYKGRKKKT----IEYFAIKSVDKSQKSKVLQEVRMLHSLD--HP 56
+Y I + +G G + V + K + +K+VD+ ++ E+++L L+ P
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEA-ARSEIQVLEHLNTTDP 73
Query: 57 N----VLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQDNQLPE--DSIRDLAQDLVRALQ 110
N ++ W+E H+ +V E +G ++++ LP D IR +A + +++
Sbjct: 74 NSTFRCVQMLEWFEHHGHICIVFE-LLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 111 YLHSKGIIYCDLKPSNILL---------------DE----NGRTKLCDFGLARKLSDASK 151
+LHS + + DLKP NIL DE N K+ DFG A + +
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA---TYDDE 189
Query: 152 APSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPF 202
S+++ T Y APE+ G S D+W +GC+L E Y G F
Sbjct: 190 HHSTLV-----STRHYRAPEVILALGW-SQPCDVWSIGCILIEYYLGFTVF 234
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 10 IGRGKYSTVYKGRKKKTIE-----YFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLR 60
+G+G + VY+G K ++ AIK+V+++ ++ + L E ++ + +V+R
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 61 FYSWYETSAHLWLVLEYCVGGDLMSLLR-------QDNQLPEDSIRDLAQ---DLVRALQ 110
+++E GDL S LR + L S+ + Q ++ +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 111 YLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS---KAPSSMLPQAKCGTPCY 167
YL++ ++ DL N ++ E+ K+ DFG+ R + + K +LP +
Sbjct: 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------W 206
Query: 168 MAPELFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSIL 215
M+PE ++G +Y SD+W G VL+E P+ G Q+++ ++
Sbjct: 207 MSPESLKDGVFTTY-SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 254
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 20/245 (8%)
Query: 10 IGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKS--KVLQEVRMLHSLDHPNVLRFYSWYET 67
+G+G + V+ G T AIK++ S LQE +++ L H +++ Y+ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 68 SAHLWLVLEYCVGGDLMSLLRQDN----QLPEDSIRDLAQDLVRALQYLHSKGIIYCDLK 123
+++V EY G L+ L+ + +LP+ + D+A + + Y+ ++ DL+
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 124 PSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMAPE--LFEEGGVHSY 181
+NIL+ EN K+ DFGLAR + D Q + APE L+ G +
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTAR----QGAKFPIKWTAPEAALY---GRFTI 194
Query: 182 ASDLWGLGCVLYECYA-GRPPFVGREFTQLVKSILXXXXXXXXXXXXXXFANLINSLLVK 240
SD+W G +L E GR P+ G +++ + +L+ K
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 254
Query: 241 DPAQR 245
DP +R
Sbjct: 255 DPEER 259
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 28/203 (13%)
Query: 31 AIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYETSAHLWLVLEYCVGGDLMSLLRQD 90
+K + + +E +L +L H ++++FY L +V EY GDL LR
Sbjct: 50 TLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAH 109
Query: 91 -------------NQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKL 137
+L + + +AQ + + YL S+ ++ DL N L+ EN K+
Sbjct: 110 GPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKI 169
Query: 138 CDFGLARKLSDASK---APSSMLPQAKCGTPCYMAPE--LFEEGGVHSYASDLWGLGCVL 192
DFG++R + +MLP +M PE ++ + + SD+W LG VL
Sbjct: 170 GDFGMSRDVYSTDYYRVGGHTMLPIR------WMPPESIMYRK---FTTESDVWSLGVVL 220
Query: 193 YECYA-GRPPFVGREFTQLVKSI 214
+E + G+ P+ ++++ I
Sbjct: 221 WEIFTYGKQPWYQLSNNEVIECI 243
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+ +Y + IG G V AIK + +++ + +E+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 56 PNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
N++ + + E +++V+E + +L +++ +L + + L ++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
++LHS GII+ DLKPSNI++ + K+ DFGLAR A +S + T Y A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRA 193
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE 206
PE+ G + D+W +GC++ E G F G +
Sbjct: 194 PEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 36 DKSQKSKVLQEVRMLHSLDHPNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQ 89
+++ + +E+ ++ ++H N++ + + E +++V+E + +L +++
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQM 121
Query: 90 DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDA 149
+L + + L ++ +++LHS GII+ DLKPSNI++ + K+ DFGLAR
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----- 174
Query: 150 SKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE 206
A +S + T Y APE+ G + D+W +GC++ E G F G +
Sbjct: 175 -TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 36 DKSQKSKVLQEVRMLHSLDHPNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQ 89
+++ + +E+ ++ ++H N++ + + E +++V+E + +L +++
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQM 121
Query: 90 DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDA 149
+L + + L ++ +++LHS GII+ DLKPSNI++ + K+ DFGLAR
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----- 174
Query: 150 SKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE 206
A +S + T Y APE+ G + D+W +GC++ E G F G +
Sbjct: 175 -TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 26/201 (12%)
Query: 10 IGRGKYSTV----YKGRKKKTIEYFAIKSVDKS----QKSKVLQEVRMLHSLDHPNVLRF 61
+G G + V Y T E A+K++ +S QE+ +L +L H +++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 62 YSWYETSAH--LWLVLEYCVGGDLMSLLRQDNQLPEDSIRD-----LAQDLVRALQYLHS 114
E L LV+EY G L + LP SI AQ + + YLH+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLR------DYLPRHSIGLAQLLLFAQQICEGMAYLHA 135
Query: 115 KGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCY-MAPELF 173
+ I+ +L N+LLD + K+ DFGLA+ + + + + +P + APE
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV---REDGDSPVFWYAPECL 192
Query: 174 EEGGVHSYASDLWGLGCVLYE 194
+E + YASD+W G LYE
Sbjct: 193 KEYKFY-YASDVWSFGVTLYE 212
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSV-----DKSQKSKVLQEVRMLHSLDH 55
+ +Y + IG G V AIK + +++ + +E+ ++ ++H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 56 PNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRAL 109
N++ + + E +++V+E + +L +++ +L + + L ++ +
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQM--ELDHERMSYLLYQMLCGI 140
Query: 110 QYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLPQAKCGTPCYMA 169
++LHS GII+ DLKPSNI++ + K+ DFGLAR A +S + T Y A
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRA 194
Query: 170 PELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE 206
PE+ G + D+W +GC++ E G F G +
Sbjct: 195 PEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTD 230
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 89/177 (50%), Gaps = 16/177 (9%)
Query: 36 DKSQKSKVLQEVRMLHSLDHPNVLRFYSWY------ETSAHLWLVLEYCVGGDLMSLLRQ 89
+++ + +E+ ++ ++H N++ + + E +++V+E + +L +++
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQM 121
Query: 90 DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDA 149
+L + + L ++ +++LHS GII+ DLKPSNI++ + K+ DFGLAR
Sbjct: 122 --ELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----- 174
Query: 150 SKAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGRE 206
A +S + T Y APE+ G + D+W +G ++ E G F G +
Sbjct: 175 -TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTD 229
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 42/226 (18%)
Query: 10 IGRGKYSTVYKGR-----KKKTIEYFAIKSVDK----SQKSKVLQEVRML-HSLDHPNVL 59
+GRG + V + K T A+K + + S+ ++ E+++L H H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 60 RFY-SWYETSAHLWLVLEYCVGGDLMSLLR--QDNQLPEDSIRDLAQDLV---------- 106
+ + L +++E+C G+L + LR ++ +P +DL +D +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP---YKDLYKDFLTLEHLIXYSF 151
Query: 107 ---RALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKL---SDASKAPSSMLPQA 160
+ +++L S+ I+ DL NILL E K+ DFGLAR + D + + LP
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 161 KCGTPCYMAPE-LFEEGGVHSYASDLWGLGCVLYECYA-GRPPFVG 204
+MAPE +F+ V++ SD+W G +L+E ++ G P+ G
Sbjct: 212 ------WMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPG 249
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,115,435
Number of Sequences: 62578
Number of extensions: 1368727
Number of successful extensions: 6697
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 3316
Number of HSP's gapped (non-prelim): 1215
length of query: 1335
length of database: 14,973,337
effective HSP length: 110
effective length of query: 1225
effective length of database: 8,089,757
effective search space: 9909952325
effective search space used: 9909952325
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)