Query 000715
Match_columns 1335
No_of_seqs 324 out of 2426
Neff 4.3
Searched_HMMs 29240
Date Tue Mar 26 15:53:41 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000715.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_488-491//hhsearch_pdb/000715hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9d_A Serine/threonine-protei 1.0 1 1 462.0 23.5 254 1-260 23-283 (350)
2 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 453.6 26.6 255 2-261 32-298 (311)
3 4fie_A Serine/threonine-protei 1.0 1 1 453.3 29.8 253 2-261 151-408 (423)
4 4fih_A Serine/threonine-protei 1.0 1 1 453.3 28.1 253 2-261 74-331 (346)
5 3hyh_A Carbon catabolite-derep 1.0 1 1 444.5 27.2 252 1-260 12-269 (275)
6 4g3f_A NF-kappa-beta-inducing 1.0 1 1 443.9 22.2 257 1-260 57-329 (336)
7 3v5w_A G-protein coupled recep 1.0 1 1 440.7 28.1 253 1-261 188-457 (689)
8 3ubd_A Ribosomal protein S6 ki 1.0 1 1 440.4 22.4 252 2-260 24-288 (304)
9 4b99_A Mitogen-activated prote 1.0 1 1 436.7 28.7 259 2-262 54-353 (398)
10 3uto_A Twitchin; kinase, muscl 1.0 1 1 432.2 26.0 256 1-263 156-420 (573)
No 1
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=462.01 Aligned_cols=254 Identities=30% Similarity=0.568 Sum_probs=232.3
Q ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCH-----HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE
Q ss_conf 98589997870169579999999788709999981711-----0799999999999189998004899998289799999
Q 000715 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS-----QKSKVLQEVRMLHSLDHPNVLRFYSWYETSAHLWLVL 75 (1335)
Q Consensus 1 IekYeIlK~LGkGsFGtVYkAkdk~TGk~VAIKiIdKs-----q~eeIlrEIkILkkLkHPNIVkLlevfed~~~LyLVM 75 (1335)
|++|++++.||+|+||.||+|+++.+++.||+|++.+. ..+.+.+|++++++++|||||++++++++.+.+|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEE
T ss_conf 12558847970277939999998899989999998658789799999999999998779989891999999899999999
Q ss_pred EECCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 604899978999838--999999999999999999999998797014789997477799975540356210035789998
Q 000715 76 EYCVGGDLMSLLRQD--NQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAP 153 (1335)
Q Consensus 76 EyieGGSL~dlIkk~--g~LSEeeIr~IL~QILeALkYLHskGIVHRDIKPeNILIDedG~IKLiDFGLAr~l~~~~~~~ 153 (1335)
|||+||+|.+++... ..+++.+++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-- 180 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE-- 180 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH--
T ss_pred ECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEECCCCCCEEECCCCC--
T ss_conf 488998399999973899997899999999999999999989915135978997987899989764652144068854--
Q ss_pred CCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH
Q ss_conf 98888875699987995000027999940249999999999980999999997899999983599999999999569999
Q 000715 154 SSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILSDPSPPLPGNPSRPFANL 233 (1335)
Q Consensus 154 ss~l~~t~vGTp~YlAPEVL~~~~~yS~KSDIWSLGVILYELLTGkpPF~g~d~~eLikkIl~~~~~plp~~iS~eL~DL 233 (1335)
.....+||+.|||||++. +..|+.++||||+||++|+|++|++||.+.+..+++.++..+..++.+..+++++.+|
T Consensus 181 ---~~~~~~GT~~YmAPE~l~-~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~l 256 (350)
T 4b9d_A 181 ---LARACIGTPYYLSPEICE-NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSL 256 (350)
T ss_dssp ---HHHHHHSCCTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHH
T ss_pred ---CCCCCCCCCCCCCHHHHC-CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH
T ss_conf ---101457883603999987-9998959999999999999997879989969999999998089999975579999999
Q ss_pred HHHHCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 998312598999999889629232365
Q 000715 234 INSLLVKDPAQRLHWSDLCGHAFWRTK 260 (1335)
Q Consensus 234 IkkLLskDPekRPTAeEILkHPFFq~~ 260 (1335)
|.+||.+||.+|||++|+++||||++.
T Consensus 257 i~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 257 VSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHCCCCHHHCCCHHHHHCCHHHHCC
T ss_conf 999855896679089999639976167
No 2
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=453.60 Aligned_cols=255 Identities=33% Similarity=0.562 Sum_probs=232.5
Q ss_pred CCEEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCH------HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE
Q ss_conf 8589997870169579999999788709999981711------0799999999999189998004899998289799999
Q 000715 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS------QKSKVLQEVRMLHSLDHPNVLRFYSWYETSAHLWLVL 75 (1335)
Q Consensus 2 ekYeIlK~LGkGsFGtVYkAkdk~TGk~VAIKiIdKs------q~eeIlrEIkILkkLkHPNIVkLlevfed~~~LyLVM 75 (1335)
++|++.+.||+|+||+||+|+++.+++.||+|++.+. ..+.+.+|++++++++||||++++++|++.+.+|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE
T ss_conf 23689889831648499999999999899999988888779789999999999998679989891999997389899999
Q ss_pred EECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf 60489997899983899999999999999999999999879701478999747779997554035621003578999898
Q 000715 76 EYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSS 155 (1335)
Q Consensus 76 EyieGGSL~dlIkk~g~LSEeeIr~IL~QILeALkYLHskGIVHRDIKPeNILIDedG~IKLiDFGLAr~l~~~~~~~ss 155 (1335)
|||+||+|.+++.+.+.+++.+++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.+......
T Consensus 112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~--- 188 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--- 188 (311)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC---
T ss_pred ECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCCCCC---
T ss_conf 64899899999987499999999999999999999999887826878789969858988899876875025778776---
Q ss_pred CCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
Q ss_conf 88887569998799500002799994024999999999998099999999789999998359999999999956999999
Q 000715 156 MLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILSDPSPPLPGNPSRPFANLIN 235 (1335)
Q Consensus 156 ~l~~t~vGTp~YlAPEVL~~~~~yS~KSDIWSLGVILYELLTGkpPF~g~d~~eLikkIl~~~~~plp~~iS~eL~DLIk 235 (1335)
....+.+||+.|||||++.+ ..|+.++||||+||++|+|++|++||.+.+..+++.++.... ..+|..+++++.+||.
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dli~ 266 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE-YDFPEKFFPKARDLVE 266 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHH-SCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-CCCCTTCCHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHCC-CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC-CCCCCCCCHHHHHHHH
T ss_conf 54367556803079989768-999968989989999999974989989979999999997199-9999656999999999
Q ss_pred HHCCCCCCCCCCHHH------HHCCCCCCCCC
Q ss_conf 831259899999988------96292323657
Q 000715 236 SLLVKDPAQRLHWSD------LCGHAFWRTKL 261 (1335)
Q Consensus 236 kLLskDPekRPTAeE------ILkHPFFq~~l 261 (1335)
+||.+||.+|+|++| +++||||++..
T Consensus 267 ~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~id 298 (311)
T 4aw0_A 267 KLLVLDATKRLGCEEMEGYGPLKAHPFFESVT 298 (311)
T ss_dssp HHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred HHCCCCHHHCCCHHHHCCCHHHHCCCCCCCCC
T ss_conf 97628975780967975877987798758989
No 3
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=453.33 Aligned_cols=253 Identities=28% Similarity=0.504 Sum_probs=228.4
Q ss_pred CCEEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCH---HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEEC
Q ss_conf 8589997870169579999999788709999981711---0799999999999189998004899998289799999604
Q 000715 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS---QKSKVLQEVRMLHSLDHPNVLRFYSWYETSAHLWLVLEYC 78 (1335)
Q Consensus 2 ekYeIlK~LGkGsFGtVYkAkdk~TGk~VAIKiIdKs---q~eeIlrEIkILkkLkHPNIVkLlevfed~~~LyLVMEyi 78 (1335)
++|++.+.||+|+||.||+|+++.+++.||+|++... ..+.+.+|+.++++++|||||+++++|.+.+.+|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECC
T ss_conf 84386169624818489999999999899999986255468999999999998579989871689999899999999698
Q ss_pred CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89997899983899999999999999999999999879701478999747779997554035621003578999898888
Q 000715 79 VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLP 158 (1335)
Q Consensus 79 eGGSL~dlIkk~g~LSEeeIr~IL~QILeALkYLHskGIVHRDIKPeNILIDedG~IKLiDFGLAr~l~~~~~~~ss~l~ 158 (1335)
+||+|.+++.. +.+++.+++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.+...... .
T Consensus 231 ~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~-----~ 304 (423)
T 4fie_A 231 EGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-----R 304 (423)
T ss_dssp TTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC-----B
T ss_pred CCCCHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEECCCCCEECCCCCCC-----C
T ss_conf 99828988761-69899999999999999999999889044657877789858999898037265477788764-----3
Q ss_pred CCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHH
Q ss_conf 8756999879950000279999402499999999999809999999978999999835999--99999999569999998
Q 000715 159 QAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILSDPS--PPLPGNPSRPFANLINS 236 (1335)
Q Consensus 159 ~t~vGTp~YlAPEVL~~~~~yS~KSDIWSLGVILYELLTGkpPF~g~d~~eLikkIl~~~~--~plp~~iS~eL~DLIkk 236 (1335)
...+||++|||||++. +..|+.++||||+||++|||++|++||.+.+..+++..+..... ...+..+++++.+||.+
T Consensus 305 ~~~~GTp~YmAPEvl~-~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 383 (423)
T 4fie_A 305 KSLVGTPYWMAPELIS-RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 383 (423)
T ss_dssp CCCEECTTTCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHC-CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 4666474727999977-999996899999999999999787998986999999999727998876501299999999999
Q ss_pred HCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 3125989999998896292323657
Q 000715 237 LLVKDPAQRLHWSDLCGHAFWRTKL 261 (1335)
Q Consensus 237 LLskDPekRPTAeEILkHPFFq~~l 261 (1335)
||.+||.+|+|+.|+++||||++..
T Consensus 384 ~L~~dP~~R~ta~ell~Hp~~~~~~ 408 (423)
T 4fie_A 384 LLVRDPAQRATAAELLKHPFLAKAG 408 (423)
T ss_dssp HSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf 8678956890999996098756899
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=453.32 Aligned_cols=253 Identities=29% Similarity=0.517 Sum_probs=228.0
Q ss_pred CCEEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCH---HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEEC
Q ss_conf 8589997870169579999999788709999981711---0799999999999189998004899998289799999604
Q 000715 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS---QKSKVLQEVRMLHSLDHPNVLRFYSWYETSAHLWLVLEYC 78 (1335)
Q Consensus 2 ekYeIlK~LGkGsFGtVYkAkdk~TGk~VAIKiIdKs---q~eeIlrEIkILkkLkHPNIVkLlevfed~~~LyLVMEyi 78 (1335)
++|++.++||+|+||.||+|+++.+++.||+|+++.. ..+.+.+|++++++++|||||+++++|.+.+.+|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECC
T ss_conf 75387079602728299999998999899999985276568999999999998679989991999999899999999698
Q ss_pred CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89997899983899999999999999999999999879701478999747779997554035621003578999898888
Q 000715 79 VGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPSSMLP 158 (1335)
Q Consensus 79 eGGSL~dlIkk~g~LSEeeIr~IL~QILeALkYLHskGIVHRDIKPeNILIDedG~IKLiDFGLAr~l~~~~~~~ss~l~ 158 (1335)
+||+|.+++.+ +.+++.+++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.+...... .
T Consensus 154 ~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~-----~ 227 (346)
T 4fih_A 154 EGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-----R 227 (346)
T ss_dssp TTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC-----B
T ss_pred CCCCHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEECCCCCEECCCCCCC-----C
T ss_conf 99808999871-89899999999999999999999888355627889978879998899027575366788775-----3
Q ss_pred CCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC--CCCCCCCHHHHHHHHH
Q ss_conf 87569998799500002799994024999999999998099999999789999998359999--9999999569999998
Q 000715 159 QAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILSDPSP--PLPGNPSRPFANLINS 236 (1335)
Q Consensus 159 ~t~vGTp~YlAPEVL~~~~~yS~KSDIWSLGVILYELLTGkpPF~g~d~~eLikkIl~~~~~--plp~~iS~eL~DLIkk 236 (1335)
.+.+||++|||||++. +..|+.++||||+||++|||++|++||.+.+..+++..+.....+ +.+..+++++.+||.+
T Consensus 228 ~~~~GTp~YmAPEvl~-~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 306 (346)
T 4fih_A 228 KSLVGTPYWMAPELIS-RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 306 (346)
T ss_dssp CCCCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHC-CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 4656275827999977-999996899999999999999787998985999999999717999887502299999999999
Q ss_pred HCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 3125989999998896292323657
Q 000715 237 LLVKDPAQRLHWSDLCGHAFWRTKL 261 (1335)
Q Consensus 237 LLskDPekRPTAeEILkHPFFq~~l 261 (1335)
||.+||++|||+.|+++||||++..
T Consensus 307 ~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 307 LLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp HSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf 8679956890999996098656899
No 5
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=444.52 Aligned_cols=252 Identities=28% Similarity=0.541 Sum_probs=230.7
Q ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCH------HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEE
Q ss_conf 98589997870169579999999788709999981711------079999999999918999800489999828979999
Q 000715 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS------QKSKVLQEVRMLHSLDHPNVLRFYSWYETSAHLWLV 74 (1335)
Q Consensus 1 IekYeIlK~LGkGsFGtVYkAkdk~TGk~VAIKiIdKs------q~eeIlrEIkILkkLkHPNIVkLlevfed~~~LyLV 74 (1335)
+++|++.+.||+|+||.||+|+++.+++.||+|++.+. ....+.+|++++++++||||+++++++++.+.+|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred EECEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEE
T ss_conf 33868999982176819999999999989999998378867878999999999999877998999299999989989999
Q ss_pred EEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCC
Q ss_conf 96048999789998389999999999999999999999987970147899974777999755403562100357899989
Q 000715 75 LEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAPS 154 (1335)
Q Consensus 75 MEyieGGSL~dlIkk~g~LSEeeIr~IL~QILeALkYLHskGIVHRDIKPeNILIDedG~IKLiDFGLAr~l~~~~~~~s 154 (1335)
|||+ +|+|.+++.+++.+++.+++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+|+.......
T Consensus 92 mEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~--- 167 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF--- 167 (275)
T ss_dssp EECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-----------
T ss_pred EECC-CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCCCC---
T ss_conf 9278-997899998749999999999999999999999988930666875876887999899945477726678874---
Q ss_pred CCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Q ss_conf 88888756999879950000279999402499999999999809999999978999999835999999999995699999
Q 000715 155 SMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILSDPSPPLPGNPSRPFANLI 234 (1335)
Q Consensus 155 s~l~~t~vGTp~YlAPEVL~~~~~yS~KSDIWSLGVILYELLTGkpPF~g~d~~eLikkIl~~~~~plp~~iS~eL~DLI 234 (1335)
..+.+||+.|||||++.+..+++.++||||+||++|+|++|++||.+.+...+...+..+. .++|..+++++.+||
T Consensus 168 ---~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li 243 (275)
T 3hyh_A 168 ---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV-YTLPKFLSPGAAGLI 243 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-CCCCTTSCHHHHHHH
T ss_pred ---CCCEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC-CCCCCCCCHHHHHHH
T ss_conf ---6770289352774550689888983656878999999998879989989999999997499-999877999999999
Q ss_pred HHHCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 98312598999999889629232365
Q 000715 235 NSLLVKDPAQRLHWSDLCGHAFWRTK 260 (1335)
Q Consensus 235 kkLLskDPekRPTAeEILkHPFFq~~ 260 (1335)
.+||++||++|||++|+++||||+..
T Consensus 244 ~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 244 KRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp HHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred HHHCCCCHHHCCCHHHHHCCCCCCCC
T ss_conf 99865896689199999719200658
No 6
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=443.91 Aligned_cols=257 Identities=26% Similarity=0.376 Sum_probs=226.9
Q ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEECCC
Q ss_conf 98589997870169579999999788709999981711079999999999918999800489999828979999960489
Q 000715 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRMLHSLDHPNVLRFYSWYETSAHLWLVLEYCVG 80 (1335)
Q Consensus 1 IekYeIlK~LGkGsFGtVYkAkdk~TGk~VAIKiIdKsq~eeIlrEIkILkkLkHPNIVkLlevfed~~~LyLVMEyieG 80 (1335)
++.|++.++||+|+||.||+|+++.+++.||+|++.++.. ..+|+.++++++|||||++++++.+.+.+|+|||||+|
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 134 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG 134 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred HHHEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHH--HHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECCCC
T ss_conf 3351768685138780999999889998999999788886--99999999857998999399999989999999966599
Q ss_pred CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCC-CEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99789998389999999999999999999999987970147899974777999-75540356210035789998988888
Q 000715 81 GDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENG-RTKLCDFGLARKLSDASKAPSSMLPQ 159 (1335)
Q Consensus 81 GSL~dlIkk~g~LSEeeIr~IL~QILeALkYLHskGIVHRDIKPeNILIDedG-~IKLiDFGLAr~l~~~~~~~ss~l~~ 159 (1335)
|+|.+++++.+.+++.+++.|+.|++.||.|||++||+||||||+|||++.+| .+||+|||+|+.+.............
T Consensus 135 g~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~ 214 (336)
T 4g3f_A 135 GSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214 (336)
T ss_dssp CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------C
T ss_pred CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEECCCCEEEEEECCCCEECCCCCCCCCEECCC
T ss_conf 86999998769999999999999999999999988904261677887995899979996278776856787654022178
Q ss_pred CCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC--CCCCCCCHHHHHHHHHH
Q ss_conf 7569998799500002799994024999999999998099999999789999998359999--99999995699999983
Q 000715 160 AKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILSDPSP--PLPGNPSRPFANLINSL 237 (1335)
Q Consensus 160 t~vGTp~YlAPEVL~~~~~yS~KSDIWSLGVILYELLTGkpPF~g~d~~eLikkIl~~~~~--plp~~iS~eL~DLIkkL 237 (1335)
..+||+.|||||++. +..|+.++||||+||++|+|++|++||.+.+..++..++.....+ .++..+++.+.+||.+|
T Consensus 215 ~~~GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~ 293 (336)
T 4g3f_A 215 YIPGTETHMAPEVVM-GKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEG 293 (336)
T ss_dssp CCCCCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHC-CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHH
T ss_conf 545580200899988-9998908999999999999997869989989999999998089980025866799999999997
Q ss_pred CCCCCCCCCCHHHH-------------HCCCCCCCC
Q ss_conf 12598999999889-------------629232365
Q 000715 238 LVKDPAQRLHWSDL-------------CGHAFWRTK 260 (1335)
Q Consensus 238 LskDPekRPTAeEI-------------LkHPFFq~~ 260 (1335)
|.+||.+|||+.|+ ++|||+.+.
T Consensus 294 L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~ 329 (336)
T 4g3f_A 294 LRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEY 329 (336)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred CCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 628976895999999999999754432169876777
No 7
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=440.71 Aligned_cols=253 Identities=32% Similarity=0.557 Sum_probs=223.4
Q ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCHH------HHHHHHH---HHHHHHCCCCCCCEEEEEEEECCEE
Q ss_conf 985899978701695799999997887099999817110------7999999---9999918999800489999828979
Q 000715 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQ------KSKVLQE---VRMLHSLDHPNVLRFYSWYETSAHL 71 (1335)
Q Consensus 1 IekYeIlK~LGkGsFGtVYkAkdk~TGk~VAIKiIdKsq------~eeIlrE---IkILkkLkHPNIVkLlevfed~~~L 71 (1335)
|++|++.+.||+|+||.||+|+++.+++.||+|++.+.. ...+.+| +.+++.++||||++++++|++.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred HHHEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEE
T ss_conf 68928888983164839999999999989999997578825255689999999999999648999871799999989988
Q ss_pred EEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCC
Q ss_conf 99996048999789998389999999999999999999999987970147899974777999755403562100357899
Q 000715 72 WLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASK 151 (1335)
Q Consensus 72 yLVMEyieGGSL~dlIkk~g~LSEeeIr~IL~QILeALkYLHskGIVHRDIKPeNILIDedG~IKLiDFGLAr~l~~~~~ 151 (1335)
|+||||++||+|.+++.+.+.+++..++.|+.||+.||.|||++||+||||||+|||++.+|++||+|||+|+.+....
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~- 346 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK- 346 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC-
T ss_pred EEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEEECCCCEEEECCCCC-
T ss_conf 9999468998299999866999999999999999999999997885416886687598089988964565566637898-
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC---CHHHHHHHHHCCCCCCCCCCCCH
Q ss_conf 989888887569998799500002799994024999999999998099999999---78999999835999999999995
Q 000715 152 APSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGR---EFTQLVKSILSDPSPPLPGNPSR 228 (1335)
Q Consensus 152 ~~ss~l~~t~vGTp~YlAPEVL~~~~~yS~KSDIWSLGVILYELLTGkpPF~g~---d~~eLikkIl~~~~~plp~~iS~ 228 (1335)
..+.|||+.|||||++..+..|+.++||||+||++|+|++|++||.+. +...+...+... ...+|..+++
T Consensus 347 ------~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~-~~~~p~~~S~ 419 (689)
T 3v5w_A 347 ------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM-AVELPDSFSP 419 (689)
T ss_dssp ------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC-CCCCCTTSCH
T ss_pred ------CCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC-CCCCCCCCCH
T ss_conf ------777657867318899847999995999999999999998687999999867799999850579-8888766999
Q ss_pred HHHHHHHHHCCCCCCCCCC-----HHHHHCCCCCCCCC
Q ss_conf 6999999831259899999-----98896292323657
Q 000715 229 PFANLINSLLVKDPAQRLH-----WSDLCGHAFWRTKL 261 (1335)
Q Consensus 229 eL~DLIkkLLskDPekRPT-----AeEILkHPFFq~~l 261 (1335)
++.+||.+||.+||.+|++ ++++++||||++..
T Consensus 420 ~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~id 457 (689)
T 3v5w_A 420 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457 (689)
T ss_dssp HHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCC
T ss_pred HHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCC
T ss_conf 99999999760898687999888999996691504789
No 8
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=440.38 Aligned_cols=252 Identities=32% Similarity=0.600 Sum_probs=228.0
Q ss_pred CCEEEEEEEECCCCEEEEEEEEC---CCCEEEEEEECCCH-----HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEE
Q ss_conf 85899978701695799999997---88709999981711-----07999999999991899980048999982897999
Q 000715 2 NQYHIYEAIGRGKYSTVYKGRKK---KTIEYFAIKSVDKS-----QKSKVLQEVRMLHSLDHPNVLRFYSWYETSAHLWL 73 (1335)
Q Consensus 2 ekYeIlK~LGkGsFGtVYkAkdk---~TGk~VAIKiIdKs-----q~eeIlrEIkILkkLkHPNIVkLlevfed~~~LyL 73 (1335)
++|++.+.||+|+||+||+|++. .+++.||+|++.+. ....+.+|++++++++||||+++++++++.+.+|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred CCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEE
T ss_conf 56589889721888399999985588789799999981577684789999999999987799799909999998999999
Q ss_pred EEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 99604899978999838999999999999999999999998797014789997477799975540356210035789998
Q 000715 74 VLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDASKAP 153 (1335)
Q Consensus 74 VMEyieGGSL~dlIkk~g~LSEeeIr~IL~QILeALkYLHskGIVHRDIKPeNILIDedG~IKLiDFGLAr~l~~~~~~~ 153 (1335)
|||||+||+|.+++.+.+.+++.+++.|+.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+........
T Consensus 104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~- 182 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK- 182 (304)
T ss_dssp EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CC-
T ss_pred EEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCCCCEECCCCCCC-
T ss_conf 9975799888999975599999999999999999999999779958888789957868998876236634332688763-
Q ss_pred CCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH
Q ss_conf 98888875699987995000027999940249999999999980999999997899999983599999999999569999
Q 000715 154 SSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILSDPSPPLPGNPSRPFANL 233 (1335)
Q Consensus 154 ss~l~~t~vGTp~YlAPEVL~~~~~yS~KSDIWSLGVILYELLTGkpPF~g~d~~eLikkIl~~~~~plp~~iS~eL~DL 233 (1335)
..+.+||+.|||||++. +..|+.++||||+||++|+|++|++||.+.+..++...+.... .++|..+++++.+|
T Consensus 183 ----~~~~~GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~l 256 (304)
T 3ubd_A 183 ----AYSFCGTVEYMAPEVVN-RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK-LGMPQFLSPEAQSL 256 (304)
T ss_dssp ----CCSCCCCGGGCCHHHHH-TSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHH
T ss_pred ----CCCCCCCCCCCCHHHHC-CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC-CCCCCCCCHHHHHH
T ss_conf ----04544181507999965-6887877763611999999985989989849999999997189-99987689999999
Q ss_pred HHHHCCCCCCCCCC-----HHHHHCCCCCCCC
Q ss_conf 99831259899999-----9889629232365
Q 000715 234 INSLLVKDPAQRLH-----WSDLCGHAFWRTK 260 (1335)
Q Consensus 234 IkkLLskDPekRPT-----AeEILkHPFFq~~ 260 (1335)
|.+||++||++||| ++|+++||||++.
T Consensus 257 i~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 257 LRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp HHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCC
T ss_conf 99986469878799986789999769040378
No 9
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=436.74 Aligned_cols=259 Identities=28% Similarity=0.483 Sum_probs=224.5
Q ss_pred CCEEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCH-----HHHHHHHHHHHHHHCCCCCCCEEEEEEEE------CCE
Q ss_conf 8589997870169579999999788709999981711-----07999999999991899980048999982------897
Q 000715 2 NQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS-----QKSKVLQEVRMLHSLDHPNVLRFYSWYET------SAH 70 (1335)
Q Consensus 2 ekYeIlK~LGkGsFGtVYkAkdk~TGk~VAIKiIdKs-----q~eeIlrEIkILkkLkHPNIVkLlevfed------~~~ 70 (1335)
++|++++.||+|+||.||+|+++.+|+.||+|++.+. ..+.+.+|+++++.++||||+++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCE
T ss_conf 97489889842608499999998999899999987400346889999999999986679995417655520355466887
Q ss_pred EEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCC
Q ss_conf 99999604899978999838999999999999999999999998797014789997477799975540356210035789
Q 000715 71 LWLVLEYCVGGDLMSLLRQDNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDENGRTKLCDFGLARKLSDAS 150 (1335)
Q Consensus 71 LyLVMEyieGGSL~dlIkk~g~LSEeeIr~IL~QILeALkYLHskGIVHRDIKPeNILIDedG~IKLiDFGLAr~l~~~~ 150 (1335)
+|+||||++ |+|.+++.+.+.+++.+++.|++||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.+....
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~ 212 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 212 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC----
T ss_pred EEEEEECCC-CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCC
T ss_conf 999983799-9889999865999999999999999999999998867678737133542788877872214342134675
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCC---------
Q ss_conf 99898888875699987995000027999940249999999999980999999997899999983599999---------
Q 000715 151 KAPSSMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILSDPSPP--------- 221 (1335)
Q Consensus 151 ~~~ss~l~~t~vGTp~YlAPEVL~~~~~yS~KSDIWSLGVILYELLTGkpPF~g~d~~eLikkIl~~~~~p--------- 221 (1335)
.... ....+.+||++|||||++.+..+|+.++||||+||++|||++|++||.+.+..+++..|......+
T Consensus 213 ~~~~-~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~ 291 (398)
T 4b99_A 213 AEHQ-YFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG 291 (398)
T ss_dssp ---C-CCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC---
T ss_pred CCCC-CCCCCCEECHHHCCHHHHCCCCCCCCHHHEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 4566-665662558676487876278889972221116899999997889989889899999999703899867763310
Q ss_pred ---------------------CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCC
Q ss_conf ---------------------99999956999999831259899999988962923236579
Q 000715 222 ---------------------LPGNPSRPFANLINSLLVKDPAQRLHWSDLCGHAFWRTKLT 262 (1335)
Q Consensus 222 ---------------------lp~~iS~eL~DLIkkLLskDPekRPTAeEILkHPFFq~~l~ 262 (1335)
.....++++.+||.+||.+||.+|||+.|+++||||++...
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 353 (398)
T 4b99_A 292 AERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 353 (398)
T ss_dssp --CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCC
T ss_pred HHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCC
T ss_conf 02345555307876887889858799999999999977499557918999965972386889
No 10
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=1.00 E-value=1 Score=432.22 Aligned_cols=256 Identities=26% Similarity=0.464 Sum_probs=228.5
Q ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCH---HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEE
Q ss_conf 98589997870169579999999788709999981711---079999999999918999800489999828979999960
Q 000715 1 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKS---QKSKVLQEVRMLHSLDHPNVLRFYSWYETSAHLWLVLEY 77 (1335)
Q Consensus 1 IekYeIlK~LGkGsFGtVYkAkdk~TGk~VAIKiIdKs---q~eeIlrEIkILkkLkHPNIVkLlevfed~~~LyLVMEy 77 (1335)
+++|++.+.||+|+||.||+|.++.+|+.||+|++.+. ..+.+.+|+++|+.++||||++++++|++...+|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEE
T ss_conf 53618988996164849999999889989999999152420599999999999868998989499999989988999860
Q ss_pred CCCCCHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCC--CCEEECCCCCCCCCCCCCCCCC
Q ss_conf 489997899983-8999999999999999999999998797014789997477799--9755403562100357899989
Q 000715 78 CVGGDLMSLLRQ-DNQLPEDSIRDLAQDLVRALQYLHSKGIIYCDLKPSNILLDEN--GRTKLCDFGLARKLSDASKAPS 154 (1335)
Q Consensus 78 ieGGSL~dlIkk-~g~LSEeeIr~IL~QILeALkYLHskGIVHRDIKPeNILIDed--G~IKLiDFGLAr~l~~~~~~~s 154 (1335)
|+||+|++++.. .+.+++.+++.|+.||+.||.|||++||+||||||+|||++.+ +.+||+|||+++.+.....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~--- 312 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS--- 312 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE---
T ss_pred CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEEEEECCCEEECCCCCC---
T ss_conf 69995999999867999999999999999999999998892305687655121478889789940663068569982---
Q ss_pred CCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC---CCCCCCCCHHHH
Q ss_conf 88888756999879950000279999402499999999999809999999978999999835999---999999995699
Q 000715 155 SMLPQAKCGTPCYMAPELFEEGGVHSYASDLWGLGCVLYECYAGRPPFVGREFTQLVKSILSDPS---PPLPGNPSRPFA 231 (1335)
Q Consensus 155 s~l~~t~vGTp~YlAPEVL~~~~~yS~KSDIWSLGVILYELLTGkpPF~g~d~~eLikkIl~~~~---~plp~~iS~eL~ 231 (1335)
....+||++|||||++. +..|+.++||||+||++|+|++|++||.+.+..+++..+..... ...+..+++++.
T Consensus 313 ---~~~~~GT~~y~APEv~~-~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 388 (573)
T 3uto_A 313 ---VKVTTGTAEFAAPEVAE-GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 388 (573)
T ss_dssp ---EEEECSSGGGCCHHHHT-TCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHH
T ss_pred ---EEEEEECCCCCCHHHHC-CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf ---32347794514999968-99989699999999999999978799798699999999984899989532468999999
Q ss_pred HHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCC
Q ss_conf 99998312598999999889629232365799
Q 000715 232 NLINSLLVKDPAQRLHWSDLCGHAFWRTKLTP 263 (1335)
Q Consensus 232 DLIkkLLskDPekRPTAeEILkHPFFq~~l~~ 263 (1335)
+||.+||.+||.+|||+.|+++||||+....+
T Consensus 389 dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~ 420 (573)
T 3uto_A 389 DFIRKLLLADPNTRMTIHQALEHPWLTPGNAP 420 (573)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCT
T ss_pred HHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCC
T ss_conf 99998864895689299999539574879898
Done!