BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000717
(1334 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81283|TC159_ARATH Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana
GN=TOC159 PE=1 SV=1
Length = 1503
Score = 1355 bits (3506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 659/866 (76%), Positives = 755/866 (87%), Gaps = 9/866 (1%)
Query: 477 MIFGSSEAAKQFLEELEQAS-GVGSQSG-AESSRDHSQRIDGQIVSDSDEEVDTDEEGEG 534
MIFGSSEAAKQFL ELE+AS G+ + S A S + S RIDGQIV+DSDE+VDT++EGE
Sbjct: 639 MIFGSSEAAKQFLAELEKASSGIEAHSDEANISNNMSDRIDGQIVTDSDEDVDTEDEGEE 698
Query: 535 KELFDSAALAALLKA-AAGADSDGGNITITSQDGSKLFSVERPAGLGTSLRTLKPA--PR 591
K +FD+AALAALLKA G S+GGN TITSQDG+KLFS++RPAGL +SLR LKPA PR
Sbjct: 699 K-MFDTAALAALLKAATGGGSSEGGNFTITSQDGTKLFSMDRPAGLSSSLRPLKPAAAPR 757
Query: 592 PNRTNLFTSSRLATGGETETNLSEEEKTKLEKLQHLRVKFLRLVHRLGYSPEDSLVGQVL 651
NR+N+F++S + ETE NLSEEEK KLEKLQ LRVKFLRL+ RLG+S EDS+ QVL
Sbjct: 758 ANRSNIFSNSNVTMADETEINLSEEEKQKLEKLQSLRVKFLRLLQRLGHSAEDSIAAQVL 817
Query: 652 HRLSLIAGRQTGQLFSLDAAKTTALQLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFG 711
+RL+L+AGRQ GQLFSLDAAK A++ EAE ++L F+LNILVLGK GVGKSATINSI G
Sbjct: 818 YRLALLAGRQAGQLFSLDAAKKKAVESEAEGNEELIFSLNILVLGKAGVGKSATINSILG 877
Query: 712 EEKTSIHAFEPGTTSVKEIVGTVDGVKIRVIDTPGLKSSGVEQGVNRKVLASIKKFTKKC 771
+ SI AF TTSV+EI GTV+GVKI IDTPGLKS+ ++Q N K+L+S+KK KKC
Sbjct: 878 NQIASIDAFGLSTTSVREISGTVNGVKITFIDTPGLKSAAMDQSTNAKMLSSVKKVMKKC 937
Query: 772 APDIVLYVDRLDSQTRDLNDLPLLRSITNALGTQIWRSAIVTLTHAASAPPDGPSGSPLS 831
PDIVLYVDRLD+QTRDLN+LPLLR+IT +LGT IW++AIVTLTHAASAPPDGPSG+PLS
Sbjct: 938 PPDIVLYVDRLDTQTRDLNNLPLLRTITASLGTSIWKNAIVTLTHAASAPPDGPSGTPLS 997
Query: 832 YEIFVAQRSHVVQQSIGQAVGDLRLMNPSLMNPVSLVENHPACRKNRDGQKVLPNGQTWR 891
Y++FVAQ SH+VQQSIGQAVGDLRLMNPSLMNPVSLVENHP CRKNR+G KVLPNGQTWR
Sbjct: 998 YDVFVAQCSHIVQQSIGQAVGDLRLMNPSLMNPVSLVENHPLCRKNREGVKVLPNGQTWR 1057
Query: 892 PQLLLLCYSMKILSEASSLAKPQESFDHRKLFGFRVRSPPLPYLLSWLLQSRTHPKLPTD 951
QLLLLCYS+K+LSE +SL +PQE DHRK+FGFRVRSPPLPYLLSWLLQSR HPKLP D
Sbjct: 1058 SQLLLLCYSLKVLSETNSLLRPQEPLDHRKVFGFRVRSPPLPYLLSWLLQSRAHPKLPGD 1117
Query: 952 QGGDNADSDIELADLSDSDQEE-EEDEYDLLPPFKPLRKAQIAKLSKEQKKAYFEEYDYR 1010
QGGD+ DSDIE+ D+SDS+QE+ E+DEYD LPPFKPLRK Q+AKLS EQ+KAYFEEYDYR
Sbjct: 1118 QGGDSVDSDIEIDDVSDSEQEDGEDDEYDQLPPFKPLRKTQLAKLSNEQRKAYFEEYDYR 1177
Query: 1011 VKLLQKKQWREELRRMREMKKRGNAATE-DYGYVGEDVDQENGSSAAVPVPLPDMVLPQS 1069
VKLLQKKQWREEL+RM+EMKK G E ++GY GE+ D ENG+ AAVPVPLPDMVLP S
Sbjct: 1178 VKLLQKKQWREELKRMKEMKKNGKKLGESEFGYPGEEDDPENGAPAAVPVPLPDMVLPPS 1237
Query: 1070 FDGDNPAYRYRFLEPNSQFLARPVLDGHGWDHDCGYDGVNVEHSLAIASRFPAAVTVQVT 1129
FD DN AYRYR+LEP SQ L RPVLD HGWDHDCGYDGVN EHSLA+ASRFPA TVQVT
Sbjct: 1238 FDSDNSAYRYRYLEPTSQLLTRPVLDTHGWDHDCGYDGVNAEHSLALASRFPATATVQVT 1297
Query: 1130 KDKKEFNLHLDSSIAAKLGENGSSMAGFDIQNVGKQLAYILRGETKFKNFKRNKTAIGAS 1189
KDKKEFN+HLDSS++AK GENGS+MAGFDIQNVGKQLAY++RGETKFKN ++NKT +G S
Sbjct: 1298 KDKKEFNIHLDSSVSAKHGENGSTMAGFDIQNVGKQLAYVVRGETKFKNLRKNKTTVGGS 1357
Query: 1190 VTFLGENVATGLKLEDQIALGKRLMLVGSTGTIRSQGDSAYGANLEMKLREADFPIGQDQ 1249
VTFLGEN+ATG+KLEDQIALGKRL+LVGSTGT+RSQGDSAYGANLE++LREADFPIGQDQ
Sbjct: 1358 VTFLGENIATGVKLEDQIALGKRLVLVGSTGTMRSQGDSAYGANLEVRLREADFPIGQDQ 1417
Query: 1250 SSLGLSLVKWRGDLALGANLQSQFSVGRSSKMAIRAGLNNKLSGQISVRTSSSDQLQIAL 1309
SS GLSLVKWRGDLALGANLQSQ SVGR+SK+A+RAGLNNK+SGQI+VRTSSSDQLQIAL
Sbjct: 1418 SSFGLSLVKWRGDLALGANLQSQVSVGRNSKIALRAGLNNKMSGQITVRTSSSDQLQIAL 1477
Query: 1310 LGILPVAMTIYKSIRPGAS-ENYSMY 1334
ILP+AM+IYKSIRP A+ + YSMY
Sbjct: 1478 TAILPIAMSIYKSIRPEATNDKYSMY 1503
>sp|Q9SLF3|TC132_ARATH Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana
GN=TOC132 PE=1 SV=1
Length = 1206
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/760 (52%), Positives = 526/760 (69%), Gaps = 25/760 (3%)
Query: 578 GLGTSLRTLKPA---PRPNRTNLFTSSRLATGGE--TETNLSEEEKTKLEKLQHLRVKFL 632
GLG + L+PA P+ +R N S E T T E ++T+ EKLQ +RVKFL
Sbjct: 454 GLGRASPLLEPASRAPQQSRVNGNGSHNQFQQAEDSTTTEADEHDETR-EKLQLIRVKFL 512
Query: 633 RLVHRLGYSPEDSLVGQVLHRLSL---IAGRQTGQL--FSLDAAKTTALQLEAEEKDDLN 687
RL HRLG +P + +V QVL+RL L + GR ++ FS D A A QLEA +D L+
Sbjct: 513 RLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGSRVGAFSFDRASAMAEQLEAAGQDPLD 572
Query: 688 FTLNILVLGKTGVGKSATINSIFGEEKTSIHAFEPGTTSVKEIVGTVDGVKIRVIDTPGL 747
F+ I+VLGK+GVGKSATINSIF E K AF+ GT V+++ G V G+K+RVIDTPGL
Sbjct: 573 FSCTIMVLGKSGVGKSATINSIFDEVKFCTDAFQMGTKRVQDVEGLVQGIKVRVIDTPGL 632
Query: 748 KSSGVEQGVNRKVLASIKKFTKKCAPDIVLYVDRLDSQTRDLNDLPLLRSITNALGTQIW 807
S +Q N K+L S+K F KK PDIVLY+DRLD Q+RD D+PLLR+I++ G IW
Sbjct: 633 LPSWSDQAKNEKILNSVKAFIKKNPPDIVLYLDRLDMQSRDSGDMPLLRTISDVFGPSIW 692
Query: 808 RSAIVTLTHAASAPPDGPSGSPLSYEIFVAQRSHVVQQSIGQAVGDLRLMNPSLMNPVSL 867
+AIV LTHAAS PPDGP+G+ SY++FV QRSHV+QQ+I QA GD+RLMNP VSL
Sbjct: 693 FNAIVGLTHAASVPPDGPNGTASSYDMFVTQRSHVIQQAIRQAAGDMRLMNP-----VSL 747
Query: 868 VENHPACRKNRDGQKVLPNGQTWRPQLLLLCYSMKILSEASSLAKPQESFDHRKLFGFRV 927
VENH ACR NR GQ+VLPNGQ W+P LLLL ++ KIL+EA++L K Q++ R F R
Sbjct: 748 VENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDNIPGRP-FAARS 806
Query: 928 RSPPLPYLLSWLLQSRTHPKLPTDQGGDNADSDIELADLSDSDQEEEEDEYDLLPPFKPL 987
++PPLP+LLS LLQSR PKLP Q GD D DL +S +EE EYD LPPFK L
Sbjct: 807 KAPPLPFLLSSLLQSRPQPKLPEQQYGDEEDE----DDLEESSDSDEESEYDQLPPFKSL 862
Query: 988 RKAQIAKLSKEQKKAYFEEYDYRVKLLQKKQWREELRRMREMKKRGNAATEDY--GYVGE 1045
KAQ+A LSK QKK Y +E +YR KLL KKQ +EE R+ R+M K+ A +D GY E
Sbjct: 863 TKAQMATLSKSQKKQYLDEMEYREKLLMKKQMKEE-RKRRKMFKKFAAEIKDLPDGY-SE 920
Query: 1046 DVDQENGSSAAVPVPLPDMVLPQSFDGDNPAYRYRFLEPNSQFLARPVLDGHGWDHDCGY 1105
+V++E+G A+VPVP+PD+ LP SFD DNP +RYR+L+ ++Q+L RPVL+ HGWDHD GY
Sbjct: 921 NVEEESGGPASVPVPMPDLSLPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDHDIGY 980
Query: 1106 DGVNVEHSLAIASRFPAAVTVQVTKDKKEFNLHLDSSIAAKLGENGSSMAGFDIQNVGKQ 1165
+GVN E + + P +V+ QVTKDKK+ N+ L+ + + K GE S+ GFD+Q VGK+
Sbjct: 981 EGVNAERLFVVKEKIPISVSGQVTKDKKDANVQLEMASSVKHGEGKSTSLGFDMQTVGKE 1040
Query: 1166 LAYILRGETKFKNFKRNKTAIGASVTFLGENVATGLKLEDQIALGKRLMLVGSTGTIRSQ 1225
LAY LR ET+F NF+RNK A G SVT LG++V+ GLK+ED+ K +V S G + S+
Sbjct: 1041 LAYTLRSETRFNNFRRNKAAAGLSVTHLGDSVSAGLKVEDKFIASKWFRIVMSGGAMTSR 1100
Query: 1226 GDSAYGANLEMKLREADFPIGQDQSSLGLSLVKWRGDLALGANLQSQFSVGRSSKMAIRA 1285
GD AYG LE +LR+ D+P+G+ ++LGLS++ W GDLA+G N+QSQ +GRSS + RA
Sbjct: 1101 GDFAYGGTLEAQLRDKDYPLGRFLTTLGLSVMDWHGDLAIGGNIQSQVPIGRSSNLIARA 1160
Query: 1286 GLNNKLSGQISVRTSSSDQLQIALLGILPVAMTIYKSIRP 1325
LNN+ +GQ+SVR +SS+QLQ+A++ I+P+ + P
Sbjct: 1161 NLNNRGAGQVSVRVNSSEQLQLAMVAIVPLFKKLLSYYYP 1200
>sp|Q9LUS2|TC120_ARATH Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana
GN=TOC120 PE=1 SV=1
Length = 1089
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/762 (50%), Positives = 517/762 (67%), Gaps = 23/762 (3%)
Query: 575 RPAGLGTSLRTLKPAPR----PNRTNLFTSSRLATGGETETNLSEEEKTKLEKLQHLRVK 630
RPAGLG + L+PAPR P + ++ ++ T ++E EKLQ +RVK
Sbjct: 333 RPAGLGRAAPLLEPAPRVTQQPRVNGNVSHNQPQQAEDSTTAETDEHDETREKLQFIRVK 392
Query: 631 FLRLVHRLGYSPEDSLVGQVLHRLSL---IAGRQTGQL--FSLDAAKTTALQLEAEEKDD 685
FLRL HRLG +P + +V QVL+RL L + GR ++ FS D A A QLEA +D
Sbjct: 393 FLRLSHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGSRVGAFSFDRASAMAEQLEAAAQDP 452
Query: 686 LNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFEPGTTSVKEIVGTVDGVKIRVIDTP 745
L+F+ I+VLGK+GVGKSATINSIF E K S AF+ GT V++I G V G+K+RVIDTP
Sbjct: 453 LDFSCTIMVLGKSGVGKSATINSIFDELKISTDAFQVGTKKVQDIEGFVQGIKVRVIDTP 512
Query: 746 GLKSSGVEQGVNRKVLASIKKFTKKCAPDIVLYVDRLDSQTRDLNDLPLLRSITNALGTQ 805
GL S +Q N K+L S++ F KK PDIVLY+DRLD Q+RD D+PLLR+IT+ G
Sbjct: 513 GLLPSWSDQHKNEKILKSVRAFIKKSPPDIVLYLDRLDMQSRDSGDMPLLRTITDVFGPS 572
Query: 806 IWRSAIVTLTHAASAPPDGPSGSPLSYEIFVAQRSHVVQQSIGQAVGDLRLMNPSLMNPV 865
IW +AIV LTHAASAPPDGP+G+ SY++FV QRSHV+QQ+I QA GD+RLMNP V
Sbjct: 573 IWFNAIVGLTHAASAPPDGPNGTASSYDMFVTQRSHVIQQAIRQAAGDMRLMNP-----V 627
Query: 866 SLVENHPACRKNRDGQKVLPNGQTWRPQLLLLCYSMKILSEASSLAKPQESFDHRKLFGF 925
SLVENH ACR NR GQ+VLPNGQ W+P LLLL ++ KIL+EA++L K Q++ + F
Sbjct: 628 SLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDNIPGGQ-FAT 686
Query: 926 RVRSPPLPYLLSWLLQSRTHPKLPTDQGGDNADSDIELADLSDSDQEEEEDEYDLLPPFK 985
R ++PPLP LLS LLQSR KLP Q D D D ++ E ++ PPFK
Sbjct: 687 RSKAPPLPLLLSSLLQSRPQAKLPEQQYDDEDDEDDLDESSDSEEESEYDEL----PPFK 742
Query: 986 PLRKAQIAKLSKEQKKAYFEEYDYRVKLLQKKQWREELRRMREMKKRGNAATEDY--GYV 1043
L KA++ KLSK QKK Y +E +YR KL K+Q +EE R+ R++ K+ A +D GY
Sbjct: 743 RLTKAEMTKLSKSQKKEYLDEMEYREKLFMKRQMKEE-RKRRKLLKKFAAEIKDMPNGY- 800
Query: 1044 GEDVDQENGSSAAVPVPLPDMVLPQSFDGDNPAYRYRFLEPNSQFLARPVLDGHGWDHDC 1103
E+V++E A+VPVP+PD+ LP SFD DNP +RYR+L+ ++Q+L RPVL+ HGWDHD
Sbjct: 801 SENVEEERSEPASVPVPMPDLSLPASFDSDNPTHRYRYLDTSNQWLVRPVLETHGWDHDI 860
Query: 1104 GYDGVNVEHSLAIASRFPAAVTVQVTKDKKEFNLHLDSSIAAKLGENGSSMAGFDIQNVG 1163
GY+GVN E + + P + + QVTKDKK+ ++ L+ + + K GE S+ GFD+QN G
Sbjct: 861 GYEGVNAERLFVVKDKIPVSFSGQVTKDKKDAHVQLELASSVKHGEGRSTSLGFDMQNAG 920
Query: 1164 KQLAYILRGETKFKNFKRNKTAIGASVTFLGENVATGLKLEDQIALGKRLMLVGSTGTIR 1223
K+LAY +R ET+F F++NK A G SVT LG++V+ GLK+ED++ KR +V S G +
Sbjct: 921 KELAYTIRSETRFNKFRKNKAAAGLSVTLLGDSVSAGLKVEDKLIANKRFRMVMSGGAMT 980
Query: 1224 SQGDSAYGANLEMKLREADFPIGQDQSSLGLSLVKWRGDLALGANLQSQFSVGRSSKMAI 1283
S+GD AYG LE + R+ D+P+G+ S+LGLS++ W GDLA+G N+QSQ +GRSS +
Sbjct: 981 SRGDVAYGGTLEAQFRDKDYPLGRFLSTLGLSVMDWHGDLAIGGNIQSQVPIGRSSNLIA 1040
Query: 1284 RAGLNNKLSGQISVRTSSSDQLQIALLGILPVAMTIYKSIRP 1325
RA LNN+ +GQ+S+R +SS+QLQ+A++ ++P+ + P
Sbjct: 1041 RANLNNRGAGQVSIRVNSSEQLQLAVVALVPLFKKLLTYYSP 1082
>sp|Q6S5G3|TOC90_ARATH Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana
GN=TOC90 PE=1 SV=1
Length = 793
Score = 493 bits (1269), Expect = e-138, Method: Compositional matrix adjust.
Identities = 293/727 (40%), Positives = 428/727 (58%), Gaps = 46/727 (6%)
Query: 608 ETETNLSEEEKTKLEKLQHLRVKFLRLVHRLGYSPEDSLVGQVLHR--LSLIAGRQTGQL 665
++ +L+ ++ L K+ L+V+FLRLV R G S + LV +VL+R L+++ + +L
Sbjct: 79 QSSIDLNGKKHNPLAKIGGLQVQFLRLVQRFGQSQNNILVSKVLYRVHLAMLIRAEESEL 138
Query: 666 FSL----DAAKTTALQLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFE 721
++ D AK A + E+ +L+F+L ILVLGKTGVGKSATINSIFG+ K+ AF
Sbjct: 139 KNVKLRQDRAKALAREQESSGIPELDFSLRILVLGKTGVGKSATINSIFGQPKSETDAFR 198
Query: 722 PGTTSVKEIVGTVDGVKIRVIDTPG---LKSSGVEQGVNRKVLASIKKFTKKCAPDIVLY 778
PGT ++E++GTV GVK+ IDTPG L SS + NRK+L SIK++ KK PD+VLY
Sbjct: 199 PGTDRIEEVMGTVSGVKVTFIDTPGFHPLSSSSTRK--NRKILLSIKRYVKKRPPDVVLY 256
Query: 779 VDRLDSQTRDLNDLPLLRSITNALGTQIWRSAIVTLTHAASAPPDGPSGSPLSYEIFVAQ 838
+DRLD +D LL+ IT G IW + I+ +TH+A A +G +G ++YE +V Q
Sbjct: 257 LDRLDMIDMRYSDFSLLQLITEIFGAAIWLNTILVMTHSA-ATTEGRNGQSVNYESYVGQ 315
Query: 839 RSHVVQQSIGQAVGDLRLMNPSLMNPVSLVENHPACRKNRDGQKVLPNGQTWRPQLLLLC 898
R VVQ I QAV D +L NP L LVENHP+C+KN G+ VLPNG W+PQ + LC
Sbjct: 316 RMDVVQHYIHQAVSDTKLENPVL-----LVENHPSCKKNLAGEYVLPNGVVWKPQFMFLC 370
Query: 899 YSMKILSEASSLAKPQESFDHRKLFGFRVRSPPLPYLLSWLLQSRTHPKLPTDQGGDNAD 958
K+L + SL + ++S + R S LP+LLS L+ R G D +
Sbjct: 371 VCTKVLGDVQSLLRFRDSIGLGQPSSTRTAS--LPHLLSVFLRRRL------SSGADETE 422
Query: 959 SDIELADLSDSDQEEEEDEYDLLPPFKPLRKAQIAKLSKEQKKAYFEEYDYRVKLLQKKQ 1018
+I+ L + D EEE DEYD LP + L K++ KLSK QKK Y +E DYR L KKQ
Sbjct: 423 KEID--KLLNLDLEEE-DEYDQLPTIRILGKSRFEKLSKSQKKEYLDELDYRETLYLKKQ 479
Query: 1019 WREELRRMREMKKRGNAATEDYGYVGEDVDQENGSSAAVPVPLPDMVLPQSFDGDNPAYR 1078
+EE RR R+ K E+ ED +Q + ++ VPLPDM P SFD D PA+R
Sbjct: 480 LKEECRRRRDEK-----LVEEENL--EDTEQRDQAA----VPLPDMAGPDSFDSDFPAHR 528
Query: 1079 YRFLEPNSQFLARPVLDGHGWDHDCGYDGVNVEHSLAIASRFPAAVTVQVTKDKKEFNLH 1138
YR + Q+L RPV D GWD D G+DG+N+E + I A+ T QV++DK+ F +
Sbjct: 529 YRCVSAGDQWLVRPVYDPQGWDRDVGFDGINIETAAKINRNLFASATGQVSRDKQRFTIQ 588
Query: 1139 LDSSIAA--KLGENGSSMAGFDIQNVGKQLAYILRGETKFKNFKRNKTAIGASVTFLGEN 1196
+++ A E S+A D+Q+ G+ L Y +G TK + FK N T +G +T G
Sbjct: 589 SETNAAYTRNFREQTFSVA-VDLQSSGEDLVYSFQGGTKLQTFKHNTTDVGVGLTSFGGK 647
Query: 1197 VATGLKLEDQIALGKRLMLVGSTGTIRSQGDSAYGANLEMKLREADFPIGQDQSSLGLSL 1256
G KLED + +GKR+ L + G +R G +A G + E +R D+P+ +Q L ++
Sbjct: 648 YYVGGKLEDTLLVGKRVKLTANAGQMRGSGQTANGGSFEACIRGRDYPVRNEQIGLTMTA 707
Query: 1257 VKWRGDLALGANLQSQFSVGRSSKMAIRAGLNNKLSGQISVRTSSSDQLQIALLGILPVA 1316
+ ++ +L L LQ+QF R + + + +NN+ G+I+V+ +SS+ +IAL+ A
Sbjct: 708 LSFKRELVLNYGLQTQFRPARGTNIDVNINMNNRKMGKINVKLNSSEHWEIALIS----A 763
Query: 1317 MTIYKSI 1323
+T++K++
Sbjct: 764 LTMFKAL 770
>sp|Q38906|TOC34_ARATH Translocase of chloroplast 34, chloroplastic OS=Arabidopsis
thaliana GN=TOC34 PE=1 SV=2
Length = 313
Score = 137 bits (344), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 128/228 (56%), Gaps = 12/228 (5%)
Query: 670 AAKTTALQLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFEPGTTSVKE 729
A ++ L++ + K++ +L +LV+GK GVGKS+T+NS+ GE+ ++ F+
Sbjct: 19 ATQSKLLEILGKYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTL 78
Query: 730 IVGTVDGVKIRVIDTPGLKSSGVEQGVNRKVLASIKKFTKKCAPDIVLYVDRLDSQTRDL 789
+ T G + +IDTPGL G VN + + IK+F D++LYVDRLD D
Sbjct: 79 VSRTRSGFTLNIIDTPGLIEGGY---VNDQAINIIKRFLLNMTIDVLLYVDRLDVYRVDD 135
Query: 790 NDLPLLRSITNALGTQIWRSAIVTLTHAASAPPDGPSGSPLSYEIFVAQRSHVVQQSI-- 847
D ++ +IT+A G +IW+ + + LTHA +PPDG L+Y FV++RS+ + + I
Sbjct: 136 LDRQVVGAITDAFGKEIWKKSALVLTHAQFSPPDG-----LNYNHFVSKRSNALLKVIQT 190
Query: 848 GQAVGDLRLMNPSLMNPVSLVENHPACRKNRDGQKVLPNGQTWRPQLL 895
G + L S+ PV LVEN C KN +K+LP G +W P L
Sbjct: 191 GAQLKKQDLQGFSI--PVILVENSGRCHKNESDEKILPCGTSWIPNLF 236
>sp|Q41009|TOC34_PEA Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1
Length = 310
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 123/227 (54%), Gaps = 11/227 (4%)
Query: 670 AAKTTALQLEAEEK-DDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFEPGTTSVK 728
A +T L+L K +D+N +L ILV+GK GVGKS+T+NSI GE SI F+
Sbjct: 20 ATQTKLLELLGNLKQEDVN-SLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPV 78
Query: 729 EIVGTVDGVKIRVIDTPGLKSSGVEQGVNRKVLASIKKFTKKCAPDIVLYVDRLDSQTRD 788
+ + G + +IDTPGL G +N L IK F D++LYVDRLD+ D
Sbjct: 79 MVSRSRAGFTLNIIDTPGLIEGGY---INDMALNIIKSFLLDKTIDVLLYVDRLDAYRVD 135
Query: 789 LNDLPLLRSITNALGTQIWRSAIVTLTHAASAPPDGPSGSPLSYEIFVAQRSHVVQQSIG 848
D + ++IT++ G IW AIV LTHA +PPDG L Y+ F ++RS + Q +
Sbjct: 136 NLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDG-----LPYDEFFSKRSEALLQVVR 190
Query: 849 QAVGDLRLMNPSLMNPVSLVENHPACRKNRDGQKVLPNGQTWRPQLL 895
+ S + PV L+EN C KN +KVLPNG W P L+
Sbjct: 191 SGASLKKDAQASDI-PVVLIENSGRCNKNDSDEKVLPNGIAWIPHLV 236
>sp|O23680|TOC33_ARATH Translocase of chloroplast 33, chloroplastic OS=Arabidopsis
thaliana GN=TOC33 PE=1 SV=1
Length = 297
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 117/216 (54%), Gaps = 13/216 (6%)
Query: 682 EKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFEPGTTSVKEIVGTVDGVKIRV 741
++ D+N ++ +LVLGK GVGKS+T+NS+ GE+ + F+ + T+ G I +
Sbjct: 30 KQKDMN-SMTVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTMGGFTINI 88
Query: 742 IDTPGLKSSGVEQGVNRKVLASIKKFTKKCAPDIVLYVDRLDSQTRDLNDLPLLRSITNA 801
IDTPGL +G VN + L IK F D++LYVDRLD D D ++ +IT
Sbjct: 89 IDTPGLVEAGY---VNHQALELIKGFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQT 145
Query: 802 LGTQIWRSAIVTLTHAASAPPDGPSGSPLSYEIFVAQRSHVVQQSI--GQAVGDLRLMNP 859
G +IW ++ LTHA +PPD LSYE F ++RS + ++I G + +
Sbjct: 146 FGKEIWCKTLLVLTHAQFSPPD-----ELSYETFSSKRSDSLLKTIRAGSKMRKQEFEDS 200
Query: 860 SLMNPVSLVENHPACRKNRDGQKVLPNGQTWRPQLL 895
++ V EN C KN +K LPNG+ W P L+
Sbjct: 201 AI--AVVYAENSGRCSKNDKDEKALPNGEAWIPNLV 234
>sp|Q552Z6|GTPA_DICDI GTP-binding protein A OS=Dictyostelium discoideum GN=gtpA PE=3 SV=1
Length = 449
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 137/317 (43%), Gaps = 52/317 (16%)
Query: 691 NILVLGKTGVGKSATINSIFGEEKTSIHAFEPGTTSVKEIVGTVDGVKIRVIDTPGLKSS 750
N+L+LG+TGVGKS+T+N++FG + +H+ E T V+G K+ +IDTPG S
Sbjct: 153 NVLLLGRTGVGKSSTLNTVFGID-IPVHSSESCTQDPFTYSRVVNGFKLNIIDTPGFLDS 211
Query: 751 GVEQGVNRKVLASIKKFTKKCAPDIVLYVDRLDSQTRDLNDLPLLRSITNALGTQIWRSA 810
E V+ + I+++ VL+V++ D ++ T LG Q+WR+A
Sbjct: 212 QGEL-VDSNNMIKIQRYLSGKTIHCVLFVEKFTETRFDGAHQLVINQFTEKLGPQLWRNA 270
Query: 811 IVTLTHAASAPPD------------GPSGSPLSYEIFVAQRSHVVQQSIGQAVGDLRLMN 858
V LT+A S PD GP YE Q + Q D
Sbjct: 271 AVVLTYANSVLPDSCYDGFDEEDDVGPWKK--HYEARALQFRKFFAGILAQLPQDDY--- 325
Query: 859 PSLMNPVSLVENHPACRKNRDGQKVLPNGQTWRPQLLLLCYSMKILSEASSLAKPQESFD 918
P PV +EN C++N GQ+VL +G P L LL +S + P+ +F
Sbjct: 326 PPKHIPVYAMENSRRCKRNEQGQRVLIDGT---PCLHLL------ISGLLKMVDPKTAF- 375
Query: 919 HRKLFGFRVRSPPLPYLLSWLLQSRTHPKLPTDQGGDNADSDIELADLSDSDQEEEEDEY 978
LF +R+ P R H GD D +LS D E +
Sbjct: 376 ---LFMGHLRAKNKP--------GRGH-------RGDQNDR-----ELSIMDNITEILKL 412
Query: 979 DLLPPFKPLRKAQIAKL 995
++PPF L K +AK+
Sbjct: 413 FIVPPFDQLGKGTVAKI 429
>sp|A9B567|DER_HERA2 GTPase Der OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM
785) GN=der PE=3 SV=1
Length = 455
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 681 EEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFEPGTT--SVKEIVGTVDGVK 738
EE++D N +L I ++G+ VGKS+ +N + GEE+ + PGTT S+ + T G+
Sbjct: 175 EEEEDDN-SLKIAIVGRPNVGKSSLLNKLVGEERVVVSNI-PGTTRDSIDTKL-TYKGIP 231
Query: 739 IRVIDTPGLKSSG-VEQGVNRKVLASIKKFTKKCAPDIVL 777
I +IDT G++ G +EQG+ R + K ++C ++L
Sbjct: 232 ITLIDTAGIRRRGSIEQGIERYSVLRTMKAIERCHIALIL 271
>sp|Q96F15|GIMA5_HUMAN GTPase IMAP family member 5 OS=Homo sapiens GN=GIMAP5 PE=1 SV=1
Length = 307
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Query: 679 EAEEKDDLNFT---LNILVLGKTGVGKSATINSIFGEE--KTSIHAFEPGTTSVKEIVGT 733
E +D+L+ T L I+++GKTG GKSAT NSI G+ ++ + A + T + + GT
Sbjct: 14 EGRSEDNLSATPPALRIILVGKTGCGKSATGNSILGQPVFESKLRA-QSVTRTCQVKTGT 72
Query: 734 VDGVKIRVIDTPGLKSSGVEQGVNRKVLASIKKFTKKCAPDIVLYVDRLDSQTRDLNDLP 793
+G K+ V+DTP + S + K + + P ++L V +L T D
Sbjct: 73 WNGRKVLVVDTPSIFESQADTQELYKNIGDCYLLSAP-GPHVLLLVIQLGRFTA--QDTV 129
Query: 794 LLRSITNALGTQIWRSAIVTLTH 816
+R + GT R ++ TH
Sbjct: 130 AIRKVKEVFGTGAMRHVVILFTH 152
>sp|Q8K3L6|GIMA5_RAT GTPase IMAP family member 5 OS=Rattus norvegicus GN=Gimap5 PE=2
SV=1
Length = 326
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 690 LNILVLGKTGVGKSATINSIFGEEKTSIHAFEPG------TTSVKEIVGTVDGVKIRVID 743
L IL++GK+G GKSAT NSI AFE T + + +GT +G V+D
Sbjct: 45 LRILLVGKSGCGKSATGNSILRRP-----AFESRLRGQSVTRTSQAEMGTWEGRSFLVVD 99
Query: 744 TPGLKSSGVEQGVNRKVLASIKKFTKKCA--PDIVLYVDRLDSQTRDLNDLPLLRSITNA 801
TP + S ++ N+ + I CA P ++L V +L T + D +R +
Sbjct: 100 TPPIFESKIQ---NQDMDKDIGNCYLMCAPGPHVLLLVTQLGRYT--VEDAMAVRMVKQI 154
Query: 802 LGTQIWRSAIVTLTH 816
G + R IV TH
Sbjct: 155 FGVGVMRYMIVLFTH 169
>sp|Q7VWL4|DER_BORPE GTPase Der OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589
/ NCTC 13251) GN=der PE=3 SV=1
Length = 451
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 11/92 (11%)
Query: 679 EAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFE-PGTTS-VKEIVGTVDG 736
E E+D ++ + + ++G+ VGKS IN++ GEE+ + AF+ PGTT EI DG
Sbjct: 175 EQLEQDVVDHRIKLAIVGRPNVGKSTLINTLLGEER--VIAFDMPGTTRDAIEIDFERDG 232
Query: 737 VKIRVIDTPGLKSSGVEQGVNRKVLASIKKFT 768
K +IDT GL+ G KV +I+KF+
Sbjct: 233 RKYTLIDTAGLRKRG-------KVFEAIEKFS 257
>sp|Q7W6Q0|DER_BORPA GTPase Der OS=Bordetella parapertussis (strain 12822 / ATCC BAA-587
/ NCTC 13253) GN=der PE=3 SV=1
Length = 451
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 11/92 (11%)
Query: 679 EAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFE-PGTTS-VKEIVGTVDG 736
E E+D ++ + + ++G+ VGKS IN++ GEE+ + AF+ PGTT EI DG
Sbjct: 175 EQLEQDVVDHRIKLAIVGRPNVGKSTLINTLLGEER--VIAFDMPGTTRDAIEIDFERDG 232
Query: 737 VKIRVIDTPGLKSSGVEQGVNRKVLASIKKFT 768
K +IDT GL+ G KV +I+KF+
Sbjct: 233 RKYTLIDTAGLRKRG-------KVFEAIEKFS 257
>sp|Q7WHN4|DER_BORBR GTPase Der OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC
13252 / RB50) GN=der PE=3 SV=1
Length = 451
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 11/92 (11%)
Query: 679 EAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFE-PGTTS-VKEIVGTVDG 736
E E+D ++ + + ++G+ VGKS IN++ GEE+ + AF+ PGTT EI DG
Sbjct: 175 EQLEQDVVDHRIKLAIVGRPNVGKSTLINTLLGEER--VIAFDMPGTTRDAIEIDFERDG 232
Query: 737 VKIRVIDTPGLKSSGVEQGVNRKVLASIKKFT 768
K +IDT GL+ G KV +I+KF+
Sbjct: 233 RKYTLIDTAGLRKRG-------KVFEAIEKFS 257
>sp|B0TFW3|DER_HELMI GTPase Der OS=Heliobacterium modesticaldum (strain ATCC 51547 /
Ice1) GN=der PE=3 SV=1
Length = 442
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 15/126 (11%)
Query: 659 GRQTGQLFSLDAAKTTALQLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIH 718
G TG L LDA A+ E +DD T+ I V+G+ VGKS+ +N+I G+E+ +
Sbjct: 151 GMNTGDL--LDA--VVAVLPENNGEDDDPDTIKIAVIGRPNVGKSSLVNAILGQERVIVS 206
Query: 719 AFEPGTTSVKEIVGTV---DGVKIRVIDTPGLKSSG-VEQGVNR-KVLASIKKFTKKCAP 773
PGTT ++ + T DG + +IDT G++ G +E+ V R V+ S++ +
Sbjct: 207 DI-PGTT--RDAIDTAFDRDGKRYILIDTAGMRRKGRIEEAVERYSVMRSLRAIDRS--- 260
Query: 774 DIVLYV 779
D+VL V
Sbjct: 261 DVVLMV 266
>sp|Q99JY3|GIMA4_MOUSE GTPase IMAP family member 4 OS=Mus musculus GN=Gimap4 PE=1 SV=1
Length = 219
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 690 LNILVLGKTGVGKSATINSIFGEEKTSIHAFEPGTTSVKEI-VGTVDGVKIRVIDTPGLK 748
L I++LGKTG GKS+T NSI GE+ + T V E V T DG ++ V+DTPG+
Sbjct: 31 LRIVLLGKTGAGKSSTGNSILGEKVFNSGICAKSITKVCEKRVSTWDGKELVVVDTPGIF 90
Query: 749 SSGVEQGVNRKVLASIKKFTKKCAPDIVLYVDRLDSQTRDLNDLPLLRSITNALGTQIWR 808
+ V ++ + T P +L V L T + + + I + G Q R
Sbjct: 91 DTEVPDADTQREITRYVALTSP-GPHALLLVVPLGRYT--VEEHKATQKILDMFGKQARR 147
Query: 809 SAIVTLT 815
I+ LT
Sbjct: 148 FMILLLT 154
>sp|B8F4X7|DER_HAEPS GTPase Der OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=der
PE=3 SV=1
Length = 504
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 71/149 (47%), Gaps = 25/149 (16%)
Query: 666 FSLDAAKTTALQLEA-----EEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAF 720
F D + TAL EA EE DD N + I ++G+ VGKS N I GEE+ ++
Sbjct: 189 FDFDNEEDTALLDEALEEDQEETDDKN--IKIAIVGRPNVGKSTLTNRILGEERVVVYDM 246
Query: 721 EPGTTSVKEIVGT-VDGVKIRVIDTPGLKSSGVEQGVNRKVLASIKKF----TKKCAPD- 774
PGTT + DG + +IDT G++ G KV +++KF T + D
Sbjct: 247 -PGTTRDSIYIPMERDGQQYTIIDTAGVRKRG-------KVHLAVEKFSVIKTLQAIQDA 298
Query: 775 --IVLYVDRLDSQTRDLNDLPLLRSITNA 801
++L +D D + DL LL I NA
Sbjct: 299 NVVLLTIDARDGVSD--QDLSLLGFILNA 325
>sp|B3DXK2|DER_METI4 GTPase Der OS=Methylacidiphilum infernorum (isolate V4) GN=der PE=3
SV=2
Length = 460
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 17/119 (14%)
Query: 664 QLFSLDAAKTTALQ--------LEAEEKDDLNF--TLNILVLGKTGVGKSATINSIFGEE 713
++F++ AA + L AEE+++ F + I V+G+ GKS+ INS+ GE
Sbjct: 139 EIFAVSAAHNLGINQLLEKIFSLGAEERENPIFAPSTRIAVIGQPNAGKSSLINSLIGES 198
Query: 714 KTSIHAFEPGTTSVKEIVGT-VDGVKIRVIDTPGLKSS-----GVEQGVNRKVLASIKK 766
+ +H EPGTT VG V GV IDT GLK G+E V+ + + SI +
Sbjct: 199 RLVVHE-EPGTTHDAVEVGIEVCGVPFTFIDTAGLKKKNKLQEGLEIKVSGRTVHSINR 256
>sp|Q4KLG2|GIMA8_RAT GTPase IMAP family member 8 OS=Rattus norvegicus GN=Gimap8 PE=2
SV=1
Length = 688
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 689 TLNILVLGKTGVGKSATINSIFG----EEKTSIHAFEPGTTSVKEIVGTVDGVKIRVIDT 744
TL +L+LGK G GKSAT N+I G E + S H T + +V G ++ VIDT
Sbjct: 48 TLRLLLLGKQGAGKSATGNTILGKAVFESRFSHHMV---TKRCQSESVSVRGKQVIVIDT 104
Query: 745 PGLKSS----GVEQGVNRKVLASIKKFTKKCAPDIVLYVDRLDSQTRDLNDLPLLRSITN 800
P L SS V+Q R+ L + P ++L V + T + D + I
Sbjct: 105 PDLFSSLGCPEVQQQNLRQCLDLLAD------PYVLLLVTPIGHSTEE--DKKTIEGIQG 156
Query: 801 ALGTQIWRSAIVTLTH 816
G Q +R IV T
Sbjct: 157 VFGPQAYRHMIVVFTR 172
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 690 LNILVLGKTGVGKSATINSIFGEEK--TSIHAFEPGTTSVKEIVGTVDGVKIRVIDTPGL 747
LNI++LG++GVGKSAT N+I G + + A +P T+ + T+D I V+DTP L
Sbjct: 475 LNIILLGRSGVGKSATGNTILGRPAFVSQLRA-QPVTSRSQSGRRTLDWQDIVVVDTPSL 533
Query: 748 -KSSGVEQGVNRKVLASIKKFTKKC 771
+ SG E K A +KK K+C
Sbjct: 534 NQMSGTE-----KNPAQLKKEIKQC 553
>sp|A9AH00|DER_BURM1 GTPase Der OS=Burkholderia multivorans (strain ATCC 17616 / 249)
GN=der PE=3 SV=1
Length = 445
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 16/121 (13%)
Query: 677 QLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFE-PGTTSVKEIVGT-V 734
Q E E+ +D + + I ++G+ VGKS +N++ GE++ + AF+ PGTT V
Sbjct: 167 QPEEEDDNDPSRGIKIAIVGRPNVGKSTLVNALIGEDR--VIAFDMPGTTRDSIYVDFER 224
Query: 735 DGVKIRVIDTPGLKSSGVEQGVNRKVLASIKKF----TKKCAPDIVLYVDRLDSQTRDLN 790
+G K +IDT GL+ SG KV +I+KF T + D + + LD+Q +D++
Sbjct: 225 NGKKYTLIDTAGLRRSG-------KVFEAIEKFSVVKTLQSISDANVVILLLDAQ-QDIS 276
Query: 791 D 791
D
Sbjct: 277 D 277
>sp|B4EAW5|DER_BURCJ GTPase Der OS=Burkholderia cepacia (strain J2315 / LMG 16656)
GN=der PE=3 SV=1
Length = 445
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 16/121 (13%)
Query: 677 QLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFE-PGTTSVKEIVGT-V 734
Q E E+DD + + I ++G+ VGKS +N++ GE++ + AF+ PGTT V
Sbjct: 167 QPEEAEEDDPSRGIKIAIVGRPNVGKSTLVNALIGEDR--VIAFDMPGTTRDSIYVDFER 224
Query: 735 DGVKIRVIDTPGLKSSGVEQGVNRKVLASIKKF----TKKCAPDIVLYVDRLDSQTRDLN 790
+G K +IDT GL+ G KV +I+KF T + D + + LD+Q +D++
Sbjct: 225 NGKKYTLIDTAGLRRRG-------KVFEAIEKFSVVKTLQSISDANVVILLLDAQ-QDIS 276
Query: 791 D 791
D
Sbjct: 277 D 277
>sp|Q85FG3|MNME_CYAME Probable tRNA modification GTPase mnmE OS=Cyanidioschyzon merolae
GN=mnmE PE=3 SV=1
Length = 446
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 688 FTLNILVLGKTGVGKSATINSIFGEEKTSIHAFEPGTTSVKEIVGTVDGVKIRVIDTPGL 747
+ + + +LG GKS N++ GEE++ + TT V E + R DT GL
Sbjct: 217 YGIQVALLGPANAGKSTLFNALIGEERSIVTPIAGTTTDVVEATLQWQQICFRFFDTAGL 276
Query: 748 KSSGVEQGVNRKVLASIKKFTKKCAPDIVLYVDRLDSQTRDLNDLPLL 795
K + E + K +A ++ K+C D++L++ +D+ + +L P L
Sbjct: 277 KEASSE--IETKAMAKAQQIAKQC--DLILWI--IDATSPNLPIPPYL 318
>sp|A5EY43|MNME_DICNV tRNA modification GTPase MnmE OS=Dichelobacter nodosus (strain
VCS1703A) GN=mnmE PE=3 SV=1
Length = 450
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 17/125 (13%)
Query: 672 KTTALQLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFEPGTTSVKEIV 731
KT L ++++ LN +++++ GK GKS+ +N++ GEE+ + P + ++IV
Sbjct: 199 KTQQLLAQSQQGQLLNDGIHLVLAGKPNAGKSSLLNALLGEERAIV---TPQAGTTRDIV 255
Query: 732 ---GTVDGVKIRVIDTPGLKSSG--VEQGVNRKVLASIKKFTKKCAPDIVLYVDRLDSQT 786
+DG+ + + DT GL+ S VEQ R+ ++K+ DIVL + D
Sbjct: 256 REDWIIDGIPVHLSDTAGLRESQDLVEQEGIRRSFDAVKR------ADIVLLLA--DGSA 307
Query: 787 RDLND 791
RD ND
Sbjct: 308 RD-ND 311
>sp|A8YV35|DER_LACH4 GTPase Der OS=Lactobacillus helveticus (strain DPC 4571) GN=der
PE=3 SV=1
Length = 435
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 680 AEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFEPGTTSVKEIVGTVDGVKI 739
AE+ N ++ V+G+ VGKS+ +N + GE++ + E T + T DGVK
Sbjct: 165 AEKDSQANDVISFSVIGRPNVGKSSIVNKLLGEDRVIVANEEGTTRDAVDTPFTKDGVKF 224
Query: 740 RVIDTPGLKSSG--VEQGVNRKVLASIKKFTKKCAPDIVLYVDRLDSQT 786
+V+DT G++ G E+ VL ++ + D+VL V LD+ T
Sbjct: 225 KVVDTAGIRRRGKVYEKTEKYSVLRAVAAIERS---DVVLLV--LDAST 268
>sp|P74120|DER_SYNY3 GTPase Der OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=der
PE=3 SV=1
Length = 452
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 652 HRLSLIAGRQTGQLFSLDAAKTTALQLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFG 711
+ +S I G TG L A Q E EE + + + ++G+ VGKS+ +N++ G
Sbjct: 144 YPMSAIHGSGTGDLLDALLEYLPAPQEEPEEDE-----IKVAIVGRPNVGKSSLLNALTG 198
Query: 712 EEKTSIHAFEPGTTSVKEIVGTVDGVKIRVIDTPGLKSS-----GVE-QGVNRKVLASIK 765
E++ + T ++V +G K R+IDT G++ G E G+NR +I+
Sbjct: 199 EQRAIVSPISGTTRDAIDMVVERNGQKYRLIDTAGIRRKKNVDYGAEFFGINR-AFKAIR 257
Query: 766 KFTKKCAPDIVLYV-DRLDSQT 786
+ D+VL+V D LD T
Sbjct: 258 R------ADVVLFVLDVLDGVT 273
>sp|B1L9N6|MNME_THESQ tRNA modification GTPase MnmE OS=Thermotoga sp. (strain RQ2)
GN=mnmE PE=3 SV=1
Length = 450
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 76/160 (47%), Gaps = 30/160 (18%)
Query: 648 GQVLHRLSLIAGRQTGQLFSLDAAKTTALQLEAEEKDDLNFTLNILVLGKTGVGKSATIN 707
G+V+ RL I + T +L DA LN L ++++GK VGKS +N
Sbjct: 182 GEVVTRLERIKEKLTEELKKADAGIL------------LNRGLRMVIVGKPNVGKSTLLN 229
Query: 708 SIFGEEKTSIHAFEPGTTS---VKEIVGTVDGVKIRVIDTPGLKSSG---VEQGVNRKVL 761
+ E++ + PGTT +EIV + G+ R++DT G++S VE+ + L
Sbjct: 230 RLLNEDRAIVTDI-PGTTRDVISEEIV--IRGILFRIVDTAGVRSETNDLVERLGIERTL 286
Query: 762 ASIKKFTKKCAPDIVLYVDRLD-SQTRDLNDLPLLRSITN 800
I+K DIVL+V LD S D D +L I N
Sbjct: 287 QEIEK------ADIVLFV--LDASSPLDEEDRKILERIKN 318
>sp|Q9WYA4|MNME_THEMA tRNA modification GTPase MnmE OS=Thermotoga maritima (strain ATCC
43589 / MSB8 / DSM 3109 / JCM 10099) GN=mnmE PE=1 SV=1
Length = 450
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 76/160 (47%), Gaps = 30/160 (18%)
Query: 648 GQVLHRLSLIAGRQTGQLFSLDAAKTTALQLEAEEKDDLNFTLNILVLGKTGVGKSATIN 707
G+V+ RL I + T +L DA LN L ++++GK VGKS +N
Sbjct: 182 GEVVTRLERIKEKLTEELKKADAGIL------------LNRGLRMVIVGKPNVGKSTLLN 229
Query: 708 SIFGEEKTSIHAFEPGTTS---VKEIVGTVDGVKIRVIDTPGLKSSG---VEQGVNRKVL 761
+ E++ + PGTT +EIV + G+ R++DT G++S VE+ + L
Sbjct: 230 RLLNEDRAIVTDI-PGTTRDVISEEIV--IRGILFRIVDTAGVRSETNDLVERLGIERTL 286
Query: 762 ASIKKFTKKCAPDIVLYVDRLD-SQTRDLNDLPLLRSITN 800
I+K DIVL+V LD S D D +L I N
Sbjct: 287 QEIEK------ADIVLFV--LDASSPLDEEDRKILERIKN 318
>sp|Q39FR3|DER_BURS3 GTPase Der OS=Burkholderia sp. (strain 383) GN=der PE=3 SV=1
Length = 445
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 16/121 (13%)
Query: 677 QLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFE-PGTTSVKEIVGT-V 734
Q E ++DD + + I ++G+ VGKS +N++ GE++ + AF+ PGTT V
Sbjct: 167 QPEEADEDDPSRGIKIAIVGRPNVGKSTLVNALIGEDR--VIAFDMPGTTRDSIYVDFER 224
Query: 735 DGVKIRVIDTPGLKSSGVEQGVNRKVLASIKKF----TKKCAPDIVLYVDRLDSQTRDLN 790
+G K +IDT GL+ G KV +I+KF T + D + + LD+Q +D++
Sbjct: 225 NGKKYTLIDTAGLRRRG-------KVFEAIEKFSVVKTLQSISDANVVILLLDAQ-QDIS 276
Query: 791 D 791
D
Sbjct: 277 D 277
>sp|Q0BEX1|DER_BURCM GTPase Der OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD)
GN=der PE=3 SV=1
Length = 445
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 16/121 (13%)
Query: 677 QLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFE-PGTTSVKEIVGT-V 734
Q E ++DD + + I ++G+ VGKS +N++ GE++ + AF+ PGTT V
Sbjct: 167 QPEEADEDDPSRGIKIAIVGRPNVGKSTLVNALIGEDR--VIAFDMPGTTRDSIYVDFER 224
Query: 735 DGVKIRVIDTPGLKSSGVEQGVNRKVLASIKKF----TKKCAPDIVLYVDRLDSQTRDLN 790
+G K +IDT GL+ G KV +I+KF T + D + + LD+Q +D++
Sbjct: 225 NGKKYTLIDTAGLRRRG-------KVFEAIEKFSVVKTLQSISDANVVILLLDAQ-QDIS 276
Query: 791 D 791
D
Sbjct: 277 D 277
>sp|A0K7T2|DER_BURCH GTPase Der OS=Burkholderia cenocepacia (strain HI2424) GN=der PE=3
SV=1
Length = 445
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 16/121 (13%)
Query: 677 QLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFE-PGTTSVKEIVGT-V 734
Q E ++DD + + I ++G+ VGKS +N++ GE++ + AF+ PGTT V
Sbjct: 167 QPEEADEDDPSRGIKIAIVGRPNVGKSTLVNALIGEDR--VIAFDMPGTTRDSIYVDFER 224
Query: 735 DGVKIRVIDTPGLKSSGVEQGVNRKVLASIKKF----TKKCAPDIVLYVDRLDSQTRDLN 790
+G K +IDT GL+ G KV +I+KF T + D + + LD+Q +D++
Sbjct: 225 NGKKYTLIDTAGLRRRG-------KVFEAIEKFSVVKTLQSISDANVVILLLDAQ-QDIS 276
Query: 791 D 791
D
Sbjct: 277 D 277
>sp|B1JT88|DER_BURCC GTPase Der OS=Burkholderia cenocepacia (strain MC0-3) GN=der PE=3
SV=1
Length = 445
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 16/121 (13%)
Query: 677 QLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFE-PGTTSVKEIVGT-V 734
Q E ++DD + + I ++G+ VGKS +N++ GE++ + AF+ PGTT V
Sbjct: 167 QPEEADEDDPSRGIKIAIVGRPNVGKSTLVNALIGEDR--VIAFDMPGTTRDSIYVDFER 224
Query: 735 DGVKIRVIDTPGLKSSGVEQGVNRKVLASIKKF----TKKCAPDIVLYVDRLDSQTRDLN 790
+G K +IDT GL+ G KV +I+KF T + D + + LD+Q +D++
Sbjct: 225 NGKKYTLIDTAGLRRRG-------KVFEAIEKFSVVKTLQSISDANVVILLLDAQ-QDIS 276
Query: 791 D 791
D
Sbjct: 277 D 277
>sp|Q1BGX0|DER_BURCA GTPase Der OS=Burkholderia cenocepacia (strain AU 1054) GN=der PE=3
SV=1
Length = 445
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 16/121 (13%)
Query: 677 QLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFE-PGTTSVKEIVGT-V 734
Q E ++DD + + I ++G+ VGKS +N++ GE++ + AF+ PGTT V
Sbjct: 167 QPEEADEDDPSRGIKIAIVGRPNVGKSTLVNALIGEDR--VIAFDMPGTTRDSIYVDFER 224
Query: 735 DGVKIRVIDTPGLKSSGVEQGVNRKVLASIKKF----TKKCAPDIVLYVDRLDSQTRDLN 790
+G K +IDT GL+ G KV +I+KF T + D + + LD+Q +D++
Sbjct: 225 NGKKYTLIDTAGLRRRG-------KVFEAIEKFSVVKTLQSISDANVVILLLDAQ-QDIS 276
Query: 791 D 791
D
Sbjct: 277 D 277
>sp|B1IHR9|MNME_CLOBK tRNA modification GTPase MnmE OS=Clostridium botulinum (strain Okra
/ Type B1) GN=mnmE PE=3 SV=1
Length = 461
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 602 RLATGGETETNLSEEEKTKLEKLQHLRVKFLRLVHRLGYS---PEDSLVGQVLHRLSLIA 658
R T ++ L + E T +++ +R + ++++ + + PED L
Sbjct: 141 RSKTDLSMKSALKQAEGTLSKEINSIRNRMIKIIAHIEATVDYPEDDL------------ 188
Query: 659 GRQTGQLFSLDAA----KTTALQLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEK 714
TGQ +D K L +EE L LN +++GK VGKS+ +N++ E K
Sbjct: 189 EEITGQKIKVDLKEIINKIDNLISASEEGKILREGLNTVIVGKPNVGKSSLLNALINENK 248
Query: 715 TSIHAFEPGTT-SVKEIVGTVDGVKIRVIDTPGLKSS 750
+ PGTT V E +DG+ I+++DT G++ +
Sbjct: 249 AIVTEI-PGTTRDVIEEYINIDGIPIKIVDTAGIRET 284
>sp|A5I816|MNME_CLOBH tRNA modification GTPase MnmE OS=Clostridium botulinum (strain Hall
/ ATCC 3502 / NCTC 13319 / Type A) GN=mnmE PE=3 SV=1
Length = 461
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 602 RLATGGETETNLSEEEKTKLEKLQHLRVKFLRLVHRLGYS---PEDSLVGQVLHRLSLIA 658
R T ++ L + E T +++ +R + ++++ + + PED L
Sbjct: 141 RSKTDLSMKSALKQAEGTLSKEINSIRNRMIKIIAHIEATVDYPEDDL------------ 188
Query: 659 GRQTGQLFSLDAA----KTTALQLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEK 714
TGQ +D K L +EE L LN +++GK VGKS+ +N++ E K
Sbjct: 189 EEITGQKIKVDLKEIINKIDNLISASEEGKILREGLNTVIVGKPNVGKSSLLNALINENK 248
Query: 715 TSIHAFEPGTT-SVKEIVGTVDGVKIRVIDTPGLKSS 750
+ PGTT V E +DG+ I+++DT G++ +
Sbjct: 249 AIVTEI-PGTTRDVIEEYINIDGIPIKIVDTAGIRET 284
>sp|A7FPM0|MNME_CLOB1 tRNA modification GTPase MnmE OS=Clostridium botulinum (strain ATCC
19397 / Type A) GN=mnmE PE=3 SV=1
Length = 461
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 602 RLATGGETETNLSEEEKTKLEKLQHLRVKFLRLVHRLGYS---PEDSLVGQVLHRLSLIA 658
R T ++ L + E T +++ +R + ++++ + + PED L
Sbjct: 141 RSKTDLSMKSALKQAEGTLSKEINSIRNRMIKIIAHIEATVDYPEDDL------------ 188
Query: 659 GRQTGQLFSLDAA----KTTALQLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEK 714
TGQ +D K L +EE L LN +++GK VGKS+ +N++ E K
Sbjct: 189 EEITGQKIKVDLKEIINKIDNLISASEEGKILREGLNTVIVGKPNVGKSSLLNALINENK 248
Query: 715 TSIHAFEPGTT-SVKEIVGTVDGVKIRVIDTPGLKSS 750
+ PGTT V E +DG+ I+++DT G++ +
Sbjct: 249 AIVTEI-PGTTRDVIEEYINIDGIPIKIVDTAGIRET 284
>sp|B1KUB2|MNME_CLOBM tRNA modification GTPase MnmE OS=Clostridium botulinum (strain Loch
Maree / Type A3) GN=mnmE PE=3 SV=1
Length = 461
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 602 RLATGGETETNLSEEEKTKLEKLQHLRVKFLRLVHRLGYS---PEDSLVGQVLHRLSLIA 658
R T ++ L + E T +++ +R + ++++ + + PED L
Sbjct: 141 RSKTDLSMKSALKQAEGTLSKEINSIRNRMIKIIAHIEATVDYPEDDL------------ 188
Query: 659 GRQTGQLFSLDAA----KTTALQLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEK 714
TGQ +D K L +EE L LN +++GK VGKS+ +N++ E K
Sbjct: 189 EEITGQKIKVDLKEIINKIDNLISASEEGKILREGLNTVIVGKPNVGKSSLLNALINENK 248
Query: 715 TSIHAFEPGTT-SVKEIVGTVDGVKIRVIDTPGLKSS 750
+ PGTT V E +DG+ I+++DT G++ +
Sbjct: 249 AIVTEI-PGTTRDVIEEYINIDGIPIKIVDTAGIRET 284
>sp|B1YR40|DER_BURA4 GTPase Der OS=Burkholderia ambifaria (strain MC40-6) GN=der PE=3
SV=1
Length = 445
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 16/121 (13%)
Query: 677 QLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFE-PGTTSVKEIVGT-V 734
Q E + DD + + I ++G+ VGKS +N++ GE++ + AF+ PGTT V
Sbjct: 167 QPEEADDDDPSRGIKIAIVGRPNVGKSTLVNALIGEDR--VIAFDMPGTTRDSIYVDFER 224
Query: 735 DGVKIRVIDTPGLKSSGVEQGVNRKVLASIKKF----TKKCAPDIVLYVDRLDSQTRDLN 790
+G K +IDT GL+ G KV +I+KF T + D + + LD+Q +D++
Sbjct: 225 NGKKYTLIDTAGLRRRG-------KVFEAIEKFSVVKTLQSISDANVVILLLDAQ-QDIS 276
Query: 791 D 791
D
Sbjct: 277 D 277
>sp|B8HQE1|DER_CYAP4 GTPase Der OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=der
PE=3 SV=1
Length = 453
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 16/139 (11%)
Query: 654 LSLIAGRQTGQLFSLDAAKTTALQLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEE 713
+S I G TG+L + +A E+D +N+ ++G+ VGKS+ +N++ GE+
Sbjct: 146 ISAIHGNGTGELLDQVVSYLPPTDQQAGEED----IINVAIVGRPNVGKSSLLNAVVGEQ 201
Query: 714 KTSIHAFEPGTTSVKEIVGTVDGVKIRVIDTPGL-KSSGVEQ-----GVNRKVLASIKKF 767
+ + T + + DG + R+IDT G+ K V+ G+NR +I++
Sbjct: 202 RAIVSPISGTTRDAIDTLVERDGQRYRLIDTAGIRKQKNVDYGPEFFGINRA-FKAIQR- 259
Query: 768 TKKCAPDIVLYVDRLDSQT 786
A ++L +D LD T
Sbjct: 260 ----AEVVLLVLDALDGVT 274
>sp|Q8EC36|DER_SHEON GTPase Der OS=Shewanella oneidensis (strain MR-1) GN=der PE=3 SV=1
Length = 487
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 668 LDAAKTTALQLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFEPGTTSV 727
+D + T + EAE+K + + + ++GK VGKS N I GEE+ ++ EPGTT
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYD-EPGTTRD 235
Query: 728 KEIVGT-VDGVKIRVIDTPGLKSSGVEQGVNRKVLASIKKFT 768
+ DG + +IDT G++ KV I+KF+
Sbjct: 236 SIYIPMERDGREYVIIDTAGVRRRS-------KVHEVIEKFS 270
>sp|Q0HX53|DER_SHESR GTPase Der OS=Shewanella sp. (strain MR-7) GN=der PE=3 SV=1
Length = 488
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 668 LDAAKTTALQLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFEPGTTSV 727
+D + T + EAE+K + + + ++GK VGKS N I GEE+ ++ EPGTT
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYD-EPGTTRD 235
Query: 728 KEIVGT-VDGVKIRVIDTPGLKSSGVEQGVNRKVLASIKKFT 768
+ DG + +IDT G++ KV I+KF+
Sbjct: 236 SIYIPMERDGREYVIIDTAGVRRRS-------KVHEVIEKFS 270
>sp|Q0HKV5|DER_SHESM GTPase Der OS=Shewanella sp. (strain MR-4) GN=der PE=3 SV=1
Length = 488
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 668 LDAAKTTALQLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFEPGTTSV 727
+D + T + EAE+K + + + ++GK VGKS N I GEE+ ++ EPGTT
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYD-EPGTTRD 235
Query: 728 KEIVGT-VDGVKIRVIDTPGLKSSGVEQGVNRKVLASIKKFT 768
+ DG + +IDT G++ KV I+KF+
Sbjct: 236 SIYIPMERDGREYVIIDTAGVRRRS-------KVHEVIEKFS 270
>sp|A0KUJ9|DER_SHESA GTPase Der OS=Shewanella sp. (strain ANA-3) GN=der PE=3 SV=1
Length = 488
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 668 LDAAKTTALQLEAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFEPGTTSV 727
+D + T + EAE+K + + + ++GK VGKS N I GEE+ ++ EPGTT
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYD-EPGTTRD 235
Query: 728 KEIVGT-VDGVKIRVIDTPGLKSSGVEQGVNRKVLASIKKFT 768
+ DG + +IDT G++ KV I+KF+
Sbjct: 236 SIYIPMERDGREYVIIDTAGVRRRS-------KVHEVIEKFS 270
>sp|P47254|MNME_MYCGE tRNA modification GTPase MnmE OS=Mycoplasma genitalium (strain ATCC
33530 / G-37 / NCTC 10195) GN=mnmE PE=3 SV=1
Length = 442
Score = 43.9 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 690 LNILVLGKTGVGKSATINSIFGEEKTSIHAFEPGTTSVKEIVGTVDGVKIRVIDTPGLK- 748
I ++G+T VGKS+ +N++ ++K + + T V E ++G I+++DT G++
Sbjct: 218 FKIAIIGETNVGKSSLLNALLNQDKAIVSNIKGSTRDVVEGDFNLNGYLIKILDTAGIRK 277
Query: 749 -SSGVEQGVNRKVLASIKK 766
SG+E+ +K SIK+
Sbjct: 278 HKSGLEKAGIKKSFESIKQ 296
>sp|Q5FKF4|DER_LACAC GTPase Der OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56
/ N2 / NCFM) GN=der PE=3 SV=1
Length = 435
Score = 43.1 bits (100), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 679 EAEEKDDLNFTLNILVLGKTGVGKSATINSIFGEEKTSIHAFEPGTTSVKEIVGTVDGVK 738
++E D ++F++ +G+ VGKS+ +N + GE++ + E T + T DG+K
Sbjct: 168 DSEADDVISFSM----IGRPNVGKSSLVNKLLGEDRVIVANEEGTTRDAVDTPFTKDGIK 223
Query: 739 IRVIDTPGLKSSG--VEQGVNRKVLASIKKFTKKCAPDIVLYVDRLDSQT 786
+V+DT G++ G E+ VL ++ + D+VL V LD+ T
Sbjct: 224 FKVVDTAGIRRRGKVYEKTEKYSVLRAMSAIERS---DVVLLV--LDAST 268
>sp|Q1J8C9|DER_STRPF GTPase Der OS=Streptococcus pyogenes serotype M4 (strain MGAS10750)
GN=der PE=3 SV=1
Length = 436
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
Query: 652 HRLSLIAGRQTGQLFSLDAAKTTALQLEAEEKDDL-NFTLNILVLGKTGVGKSATINSIF 710
+ +S + G TG + LDA EAEE DD+ F+L +G+ VGKS+ IN+I
Sbjct: 142 YPVSSVHGIGTGDV--LDAIVENLPVEEAEENDDIIRFSL----IGRPNVGKSSLINAIL 195
Query: 711 GEEKTSIHAFEPGTT--SVKEIVGTVDGVKIRVIDTPGLKSSG 751
GE++ I + GTT ++ DG + +IDT G++ SG
Sbjct: 196 GEDRV-IASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSG 237
>sp|Q1JIH4|DER_STRPD GTPase Der OS=Streptococcus pyogenes serotype M2 (strain MGAS10270)
GN=der PE=3 SV=1
Length = 436
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
Query: 652 HRLSLIAGRQTGQLFSLDAAKTTALQLEAEEKDDL-NFTLNILVLGKTGVGKSATINSIF 710
+ +S + G TG + LDA EAEE DD+ F+L +G+ VGKS+ IN+I
Sbjct: 142 YPVSSVHGIGTGDV--LDAIVENLPVEEAEENDDIIRFSL----IGRPNVGKSSLINAIL 195
Query: 711 GEEKTSIHAFEPGTT--SVKEIVGTVDGVKIRVIDTPGLKSSG 751
GE++ I + GTT ++ DG + +IDT G++ SG
Sbjct: 196 GEDRV-IASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSG 237
>sp|B5XJW0|DER_STRPZ GTPase Der OS=Streptococcus pyogenes serotype M49 (strain NZ131)
GN=der PE=3 SV=1
Length = 436
Score = 42.4 bits (98), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
Query: 652 HRLSLIAGRQTGQLFSLDAAKTTALQLEAEEKDDL-NFTLNILVLGKTGVGKSATINSIF 710
+ +S + G TG + LDA EAEE DD+ F+L +G+ VGKS+ IN+I
Sbjct: 142 YPVSSVHGIGTGDV--LDAIVENLPVEEAEENDDIIRFSL----IGRPNVGKSSLINAIL 195
Query: 711 GEEKTSIHAFEPGTT--SVKEIVGTVDGVKIRVIDTPGLKSSG 751
GE++ I + GTT ++ DG + +IDT G++ SG
Sbjct: 196 GEDRV-IASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSG 237
>sp|P0DA91|DER_STRPQ GTPase Der OS=Streptococcus pyogenes serotype M3 (strain SSI-1)
GN=der PE=3 SV=1
Length = 436
Score = 42.4 bits (98), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
Query: 652 HRLSLIAGRQTGQLFSLDAAKTTALQLEAEEKDDL-NFTLNILVLGKTGVGKSATINSIF 710
+ +S + G TG + LDA EAEE DD+ F+L +G+ VGKS+ IN+I
Sbjct: 142 YPVSSVHGIGTGDV--LDAIVENLPVEEAEENDDIIRFSL----IGRPNVGKSSLINAIL 195
Query: 711 GEEKTSIHAFEPGTT--SVKEIVGTVDGVKIRVIDTPGLKSSG 751
GE++ I + GTT ++ DG + +IDT G++ SG
Sbjct: 196 GEDRV-IASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSG 237
>sp|Q1JNC4|DER_STRPC GTPase Der OS=Streptococcus pyogenes serotype M12 (strain MGAS9429)
GN=der PE=3 SV=1
Length = 436
Score = 42.4 bits (98), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
Query: 652 HRLSLIAGRQTGQLFSLDAAKTTALQLEAEEKDDL-NFTLNILVLGKTGVGKSATINSIF 710
+ +S + G TG + LDA EAEE DD+ F+L +G+ VGKS+ IN+I
Sbjct: 142 YPVSSVHGIGTGDV--LDAIVENLPVEEAEENDDIIRFSL----IGRPNVGKSSLINAIL 195
Query: 711 GEEKTSIHAFEPGTT--SVKEIVGTVDGVKIRVIDTPGLKSSG 751
GE++ I + GTT ++ DG + +IDT G++ SG
Sbjct: 196 GEDRV-IASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSG 237
>sp|Q1JDF1|DER_STRPB GTPase Der OS=Streptococcus pyogenes serotype M12 (strain MGAS2096)
GN=der PE=3 SV=1
Length = 436
Score = 42.4 bits (98), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
Query: 652 HRLSLIAGRQTGQLFSLDAAKTTALQLEAEEKDDL-NFTLNILVLGKTGVGKSATINSIF 710
+ +S + G TG + LDA EAEE DD+ F+L +G+ VGKS+ IN+I
Sbjct: 142 YPVSSVHGIGTGDV--LDAIVENLPVEEAEENDDIIRFSL----IGRPNVGKSSLINAIL 195
Query: 711 GEEKTSIHAFEPGTT--SVKEIVGTVDGVKIRVIDTPGLKSSG 751
GE++ I + GTT ++ DG + +IDT G++ SG
Sbjct: 196 GEDRV-IASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSG 237
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.128 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 501,389,814
Number of Sequences: 539616
Number of extensions: 23019888
Number of successful extensions: 120078
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 1733
Number of HSP's that attempted gapping in prelim test: 102183
Number of HSP's gapped (non-prelim): 12354
length of query: 1334
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1204
effective length of database: 121,419,379
effective search space: 146188932316
effective search space used: 146188932316
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 68 (30.8 bits)