BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000726
(1329 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 181 bits (460), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/271 (39%), Positives = 158/271 (58%), Gaps = 19/271 (7%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
DL +++G+G+FGTV+ +W G+DVA+K + + F ER+ EF RE I+ +L
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDF-----HAERVN-EFLREVAIMKRL 91
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--ERHLDRRKRLIIAMDAAFG 1160
HPN+V F G V P L+ VTE++ GSL +L LD R+RL +A D A G
Sbjct: 92 RHPNIVLFMGAVTQPPN--LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 1161 MEYLHSKN--IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG-GVRGTLPW 1217
M YLH++N IVH +LK NLLV+ K + KV DFGLS++K +T ++ GT W
Sbjct: 150 MNYLHNRNPPIVHRNLKSPNLLVDKKYTV----KVCDFGLSRLKASTFLSSKSAAGTPEW 205
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
MAPE+L S +EK DV+SFG++LWE+ T ++P+ N++ ++ + R +P
Sbjct: 206 MAPEVLRDEPS--NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRN 263
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
+ + ++E CW +P RPSF I LR
Sbjct: 264 LNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 180 bits (456), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 157/271 (57%), Gaps = 19/271 (7%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
DL +++G+G+FGTV+ +W G+DVA+K + + F ER+ EF RE I+ +L
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDF-----HAERVN-EFLREVAIMKRL 91
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--ERHLDRRKRLIIAMDAAFG 1160
HPN+V F G V P L+ VTE++ GSL +L LD R+RL +A D A G
Sbjct: 92 RHPNIVLFMGAVTQPPN--LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 1161 MEYLHSKN--IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT-LVTGGVRGTLPW 1217
M YLH++N IVH DLK NLLV+ K + KV DFGLS++K + L + GT W
Sbjct: 150 MNYLHNRNPPIVHRDLKSPNLLVDKKYTV----KVCDFGLSRLKASXFLXSKXAAGTPEW 205
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
MAPE+L S +EK DV+SFG++LWE+ T ++P+ N++ ++ + R +P
Sbjct: 206 MAPEVLRDEPS--NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRN 263
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
+ + ++E CW +P RPSF I LR
Sbjct: 264 LNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp
From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 151/284 (53%), Gaps = 14/284 (4%)
Query: 1031 FDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRG--TDVAIKRIKKSCFTGRSSEQERL 1088
F S L + + ++E K++G G FG V+ G+ + VAIK + G + E+
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 1089 TLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR 1148
EF RE I+S L+HPN+V YG++ + P V EF+ G L H LL K +
Sbjct: 68 Q-EFQREVFIMSNLNHPNIVKLYGLMHNPP----RMVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 1149 KRLIIAMDAAFGMEYLHSKN--IVHFDLKCDNLLVNLKDPIRPIC-KVGDFGLSKIKRNT 1205
+L + +D A G+EY+ ++N IVH DL+ N+ + D P+C KV DFGLS+ ++
Sbjct: 123 VKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSV 180
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAI--IG 1263
G+ G WMAPE + +EK D +SF ++L+ ILTGE P+ YG I I
Sbjct: 181 HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240
Query: 1264 GIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
I LRP +P C R ++E CW+ DP RP F+ I + L
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 150/284 (52%), Gaps = 14/284 (4%)
Query: 1031 FDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRG--TDVAIKRIKKSCFTGRSSEQERL 1088
F S L + + ++E K++G G FG V+ G+ + VAIK + G + E+
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 1089 TLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR 1148
EF RE I+S L+HPN+V YG++ + P V EF+ G L H LL K +
Sbjct: 68 Q-EFQREVFIMSNLNHPNIVKLYGLMHNPP----RMVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 1149 KRLIIAMDAAFGMEYLHSKN--IVHFDLKCDNLLVNLKDPIRPIC-KVGDFGLSKIKRNT 1205
+L + +D A G+EY+ ++N IVH DL+ N+ + D P+C KV DFG S+ ++
Sbjct: 123 VKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSV 180
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAI--IG 1263
G+ G WMAPE + +EK D +SF ++L+ ILTGE P+ YG I I
Sbjct: 181 HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240
Query: 1264 GIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
I LRP +P C R ++E CW+ DP RP F+ I + L
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
Length = 287
Score = 165 bits (417), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 150/284 (52%), Gaps = 14/284 (4%)
Query: 1031 FDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRG--TDVAIKRIKKSCFTGRSSEQERL 1088
F S L + + ++E K++G G FG V+ G+ + VAIK + G + E+
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 1089 TLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR 1148
EF RE I+S L+HPN+V YG++ + P V EF+ G L H LL K +
Sbjct: 68 Q-EFQREVFIMSNLNHPNIVKLYGLMHNPP----RMVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 1149 KRLIIAMDAAFGMEYLHSKN--IVHFDLKCDNLLVNLKDPIRPIC-KVGDFGLSKIKRNT 1205
+L + +D A G+EY+ ++N IVH DL+ N+ + D P+C KV DF LS+ ++
Sbjct: 123 VKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSV 180
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAI--IG 1263
G+ G WMAPE + +EK D +SF ++L+ ILTGE P+ YG I I
Sbjct: 181 HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240
Query: 1264 GIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
I LRP +P C R ++E CW+ DP RP F+ I + L
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 146 bits (368), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 140/272 (51%), Gaps = 22/272 (8%)
Query: 1044 LEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLH 1103
LEE+ +G G FG VY W G +VA+K + S E + +EA++ + L
Sbjct: 11 LEEI--IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVR----QEAKLFAMLK 64
Query: 1104 HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEY 1163
HPN++A GV P L V EF G L VL K D A+ A GM Y
Sbjct: 65 HPNIIALRGVCLKEP--NLCLVMEFARGGPLNRVLSGKRIPPDILVNW--AVQIARGMNY 120
Query: 1164 LHSKNIV---HFDLKCDNLLVNLK----DPIRPICKVGDFGLSK-IKRNTLVTGGVRGTL 1215
LH + IV H DLK N+L+ K D I K+ DFGL++ R T ++ G
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA--GAY 178
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
WMAPE++ +S S+ DV+S+G++LWE+LTGE P+ + A+ G+ N L P+P
Sbjct: 179 AWMAPEVIR--ASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP 236
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C + LME CW PDP RPSFT I +L
Sbjct: 237 STCPEPFAKLMEDCWNPDPHSRPSFTNILDQL 268
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 137 bits (345), Expect = 4e-32, Method: Composition-based stats.
Identities = 95/271 (35%), Positives = 147/271 (54%), Gaps = 26/271 (9%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGT-DVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+K E++ LKELGSG FG V GKW+G DVA+K IK+ G SE E F++EA+
Sbjct: 5 LKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKE----GSMSEDE-----FFQEAQ 55
Query: 1098 ILSKLHHPNVVAFYGVV-QDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
+ KL HP +V FYGV ++ P + VTE++ NG L + L S + L+ + L + D
Sbjct: 56 TMMKLSHPKLVKFYGVCSKEYP---IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYD 112
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPIC-KVGDFGLSK--IKRNTLVTGGVRG 1213
GM +L S +H DL N LV+ R +C KV DFG+++ + + + G +
Sbjct: 113 VCEGMAFLESHQFIHRDLAARNCLVD-----RDLCVKVSDFGMTRYVLDDQYVSSVGTKF 167
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE+ + K S K DV++FGI++WE+ + G+ PY +++ + + V+ R
Sbjct: 168 PVKWSAPEVFH--YFKYSSKSDVWAFGILMWEVFSLGKMPY-DLYTNSEVVLKVSQGHRL 224
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
P +M CW P RP+F ++
Sbjct: 225 YRPHLASDTIYQIMYSCWHELPEKRPTFQQL 255
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 143/266 (53%), Gaps = 26/266 (9%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
+ +GSG+FGTVY GKW G DVA+K + + T + + F E +L K H N+
Sbjct: 18 QRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNI 70
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ F G LA VT++ SL H L + E + +K + IA A GM+YLH+K
Sbjct: 71 LLFMGY---STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 127
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGG-----VRGTLPWMAPEL 1222
+I+H DLK +N+ ++ + + K+GDFGL+ +K +G + G++ WMAPE+
Sbjct: 128 SIIHRDLKSNNIFLHEDNTV----KIGDFGLATVKSRW--SGSHQFEQLSGSILWMAPEV 181
Query: 1223 LNGSSSK-VSEKVDVFSFGIVLWEILTGEEPYANM-HYGAIIGGIVNNTLRP---PVPGF 1277
+ S S + DV++FGIVL+E++TG+ PY+N+ + II + +L P V
Sbjct: 182 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSN 241
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEI 1303
C + LM +C RPSF I
Sbjct: 242 CPKRMKRLMAECLKKKRDERPSFPRI 267
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 136 bits (343), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/277 (35%), Positives = 143/277 (51%), Gaps = 27/277 (9%)
Query: 1035 TLQIIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWR 1094
+L +I +++E + +G G FG V KWR DVAIK+I+ SE ER F
Sbjct: 2 SLHMIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE--------SESERKA--FIV 51
Query: 1095 EAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKER--HLDRRKRLI 1152
E LS+++HPN+V YG + + V E+ GSL +VL E + +
Sbjct: 52 ELRQLSRVNHPNIVKLYGACLN----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 107
Query: 1153 IAMDAAFGMEYLHS---KNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ + G+ YLHS K ++H DLK NLL+ + IC DFG + T +T
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC---DFG-TACDIQTHMTN 163
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAI-IGGIVNN 1268
+G+ WMAPE+ GS+ SEK DVFS+GI+LWE++T +P+ + A I V+N
Sbjct: 164 N-KGSAAWMAPEVFEGSN--YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN 220
Query: 1269 TLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
RPP+ LM +CW+ DP RPS EI +
Sbjct: 221 GTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 25/277 (9%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFW 1093
I+ E +E + +G G FG V+ G + + VAIK K +C + E+ F
Sbjct: 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREK------FL 439
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
+EA + + HP++V GV+ + P + + E G LR L ++ LD ++
Sbjct: 440 QEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKFSLDLASLILY 496
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
A + + YL SK VH D+ N+LV+ D + K+GDFGLS+ ++ +G
Sbjct: 497 AYQLSTALAYLESKRFVHRDIAARNVLVSATDCV----KLGDFGLSRYMEDSTYYKASKG 552
Query: 1214 TLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTL 1270
LP WMAPE +N + + DV+ FG+ +WEIL G +P+ + +IG I N
Sbjct: 553 KLPIKWMAPESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 609
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P+P C LM +CWA DP RP FTE+ +L
Sbjct: 610 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 646
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 143/278 (51%), Gaps = 24/278 (8%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKWRG--TDVAIKRIKKSCFTGRSSEQERLTLEFWRE 1095
++ +EDL +++G G FG V+ G+ R T VA+K SC R + L +F +E
Sbjct: 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVK----SC---RETLPPDLKAKFLQE 162
Query: 1096 AEILSKLHHPNVVAFYGVV-QDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIA 1154
A IL + HPN+V GV Q P + V E + G L ++ L + L +
Sbjct: 163 ARILKQYSHPNIVRLIGVCTQKQP---IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMV 219
Query: 1155 MDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTL--VTGGVR 1212
DAA GMEYL SK +H DL N LV K+ + K+ DFG+S+ + + + +GG+R
Sbjct: 220 GDAAAGMEYLESKCCIHRDLAARNCLVTEKN----VLKISDFGMSREEADGVXAASGGLR 275
Query: 1213 GT-LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTL 1270
+ W APE LN + S + DV+SFGI+LWE + G PY N+ V
Sbjct: 276 QVPVKWTAPEALN--YGRYSSESDVWSFGILLWETFSLGASPYPNLS-NQQTREFVEKGG 332
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
R P P C LMEQCWA +P RPSF+ I + L+
Sbjct: 333 RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 143/278 (51%), Gaps = 24/278 (8%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKWRG--TDVAIKRIKKSCFTGRSSEQERLTLEFWRE 1095
++ +EDL +++G G FG V+ G+ R T VA+K SC R + L +F +E
Sbjct: 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVK----SC---RETLPPDLKAKFLQE 162
Query: 1096 AEILSKLHHPNVVAFYGVV-QDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIA 1154
A IL + HPN+V GV Q P + V E + G L ++ L + L +
Sbjct: 163 ARILKQYSHPNIVRLIGVCTQKQP---IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMV 219
Query: 1155 MDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTL--VTGGVR 1212
DAA GMEYL SK +H DL N LV K+ + K+ DFG+S+ + + + +GG+R
Sbjct: 220 GDAAAGMEYLESKCCIHRDLAARNCLVTEKN----VLKISDFGMSREEADGVYAASGGLR 275
Query: 1213 GT-LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTL 1270
+ W APE LN + S + DV+SFGI+LWE + G PY N+ V
Sbjct: 276 QVPVKWTAPEALN--YGRYSSESDVWSFGILLWETFSLGASPYPNLS-NQQTREFVEKGG 332
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
R P P C LMEQCWA +P RPSF+ I + L+
Sbjct: 333 RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its
Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/277 (35%), Positives = 143/277 (51%), Gaps = 27/277 (9%)
Query: 1035 TLQIIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWR 1094
+L +I +++E + +G G FG V KWR DVAIK+I+ SE ER F
Sbjct: 1 SLHMIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE--------SESERKA--FIV 50
Query: 1095 EAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKER--HLDRRKRLI 1152
E LS+++HPN+V YG + + V E+ GSL +VL E + +
Sbjct: 51 ELRQLSRVNHPNIVKLYGACLN----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 106
Query: 1153 IAMDAAFGMEYLHS---KNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ + G+ YLHS K ++H DLK NLL+ + IC DFG + T +T
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC---DFG-TACDIQTHMTN 162
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAI-IGGIVNN 1268
+G+ WMAPE+ GS+ SEK DVFS+GI+LWE++T +P+ + A I V+N
Sbjct: 163 N-KGSAAWMAPEVFEGSN--YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN 219
Query: 1269 TLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
RPP+ LM +CW+ DP RPS EI +
Sbjct: 220 GTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 25/277 (9%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFW 1093
I+ E +E + +G G FG V+ G + + VAIK K +C + E+ F
Sbjct: 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREK------FL 439
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
+EA + + HP++V GV+ + P + + E G LR L ++ LD ++
Sbjct: 440 QEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKFSLDLASLILY 496
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
A + + YL SK VH D+ N+LV+ D + K+GDFGLS+ ++ +G
Sbjct: 497 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV----KLGDFGLSRYMEDSTYYKASKG 552
Query: 1214 TLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTL 1270
LP WMAPE +N + + DV+ FG+ +WEIL G +P+ + +IG I N
Sbjct: 553 KLPIKWMAPESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 609
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P+P C LM +CWA DP RP FTE+ +L
Sbjct: 610 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 646
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
Length = 289
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 142/266 (53%), Gaps = 26/266 (9%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
+ +GSG+FGTVY GKW G DVA+K + + T + + F E +L K H N+
Sbjct: 30 QRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNI 82
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ F G LA VT++ SL H L + E + +K + IA A GM+YLH+K
Sbjct: 83 LLFMGY---STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGG-----VRGTLPWMAPEL 1222
+I+H DLK +N+ ++ + + K+GDFGL+ K +G + G++ WMAPE+
Sbjct: 140 SIIHRDLKSNNIFLHEDNTV----KIGDFGLATEKSRW--SGSHQFEQLSGSILWMAPEV 193
Query: 1223 LNGSSSK-VSEKVDVFSFGIVLWEILTGEEPYANM-HYGAIIGGIVNNTLRP---PVPGF 1277
+ S S + DV++FGIVL+E++TG+ PY+N+ + II + +L P V
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSN 253
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEI 1303
C + LM +C RPSF I
Sbjct: 254 CPKRMKRLMAECLKKKRDERPSFPRI 279
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 134/265 (50%), Gaps = 15/265 (5%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
K +G+G FG VY G + T K + + T ++ E+ ++F EA I+ + H N+
Sbjct: 50 KVIGAGEFGEVYKGMLK-TSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ GV+ + +TE+M NG+L L K+ + + + A GM+YL +
Sbjct: 109 IRLEGVISKYK--PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWMAPELL 1223
N VH DL N+LVN +CKV DFGLS++ + T T G + + W APE +
Sbjct: 167 NYVHRDLAARNILVNSN----LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 1224 NGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEW 1282
S K + DV+SFGIV+WE++T GE PY + ++ I N+ R P P C S
Sbjct: 223 --SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI-NDGFRLPTPMDCPSAI 279
Query: 1283 RLLMEQCWAPDPVVRPSFTEIARRL 1307
LM QCW + RP F +I L
Sbjct: 280 YQLMMQCWQQERARRPKFADIVSIL 304
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
Length = 292
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 142/266 (53%), Gaps = 26/266 (9%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
+ +GSG+FGTVY GKW G DVA+K + + T + + F E +L K H N+
Sbjct: 30 QRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNI 82
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ F G LA VT++ SL H L + E + +K + IA A GM+YLH+K
Sbjct: 83 LLFMGY---STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGG-----VRGTLPWMAPEL 1222
+I+H DLK +N+ ++ + + K+GDFGL+ K +G + G++ WMAPE+
Sbjct: 140 SIIHRDLKSNNIFLHEDNTV----KIGDFGLATEKSRW--SGSHQFEQLSGSILWMAPEV 193
Query: 1223 LNGSSSK-VSEKVDVFSFGIVLWEILTGEEPYANM-HYGAIIGGIVNNTLRP---PVPGF 1277
+ S S + DV++FGIVL+E++TG+ PY+N+ + II + +L P V
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSN 253
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEI 1303
C + LM +C RPSF I
Sbjct: 254 CPKRMKRLMAECLKKKRDERPSFPRI 279
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 25/277 (9%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFW 1093
I+ E +E + +G G FG V+ G + + VAIK K +C + E+ F
Sbjct: 9 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREK------FL 61
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
+EA + + HP++V GV+ + P + + E G LR L ++ LD ++
Sbjct: 62 QEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILY 118
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
A + + YL SK VH D+ N+LV+ D + K+GDFGLS+ ++ +G
Sbjct: 119 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV----KLGDFGLSRYMEDSTYYKASKG 174
Query: 1214 TLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTL 1270
LP WMAPE +N + + DV+ FG+ +WEIL G +P+ + +IG I N
Sbjct: 175 KLPIKWMAPESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 231
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P+P C LM +CWA DP RP FTE+ +L
Sbjct: 232 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 268
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 25/277 (9%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFW 1093
I+ E +E + +G G FG V+ G + + VAIK K +C + E+ F
Sbjct: 10 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREK------FL 62
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
+EA + + HP++V GV+ + P + + E G LR L ++ LD ++
Sbjct: 63 QEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILY 119
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
A + + YL SK VH D+ N+LV+ D + K+GDFGLS+ ++ +G
Sbjct: 120 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV----KLGDFGLSRYMEDSTYYKASKG 175
Query: 1214 TLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTL 1270
LP WMAPE +N + + DV+ FG+ +WEIL G +P+ + +IG I N
Sbjct: 176 KLPIKWMAPESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 232
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P+P C LM +CWA DP RP FTE+ +L
Sbjct: 233 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 269
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 134 bits (337), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 25/277 (9%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFW 1093
I+ E +E + +G G FG V+ G + + VAIK K +C + E+ F
Sbjct: 35 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREK------FL 87
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
+EA + + HP++V GV+ + P + + E G LR L ++ LD ++
Sbjct: 88 QEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILY 144
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
A + + YL SK VH D+ N+LV+ D + K+GDFGLS+ ++ +G
Sbjct: 145 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV----KLGDFGLSRYMEDSTYYKASKG 200
Query: 1214 TLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTL 1270
LP WMAPE +N + + DV+ FG+ +WEIL G +P+ + +IG I N
Sbjct: 201 KLPIKWMAPESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 257
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P+P C LM +CWA DP RP FTE+ +L
Sbjct: 258 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 294
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 134 bits (337), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 25/277 (9%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFW 1093
I+ E +E + +G G FG V+ G + + VAIK K +C + E+ F
Sbjct: 4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREK------FL 56
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
+EA + + HP++V GV+ + P + + E G LR L ++ LD ++
Sbjct: 57 QEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILY 113
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
A + + YL SK VH D+ N+LV+ D + K+GDFGLS+ ++ +G
Sbjct: 114 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV----KLGDFGLSRYMEDSTYYKASKG 169
Query: 1214 TLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTL 1270
LP WMAPE +N + + DV+ FG+ +WEIL G +P+ + +IG I N
Sbjct: 170 KLPIKWMAPESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 226
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P+P C LM +CWA DP RP FTE+ +L
Sbjct: 227 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 263
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 25/277 (9%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFW 1093
I+ E +E + +G G FG V+ G + + VAIK K +C + E+ F
Sbjct: 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREK------FL 64
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
+EA + + HP++V GV+ + P + + E G LR L ++ LD ++
Sbjct: 65 QEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILY 121
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
A + + YL SK VH D+ N+LV+ D + K+GDFGLS+ ++ +G
Sbjct: 122 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV----KLGDFGLSRYMEDSTYYKASKG 177
Query: 1214 TLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTL 1270
LP WMAPE +N + + DV+ FG+ +WEIL G +P+ + +IG I N
Sbjct: 178 KLPIKWMAPESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 234
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P+P C LM +CWA DP RP FTE+ +L
Sbjct: 235 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 271
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 134 bits (336), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 25/277 (9%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFW 1093
I+ E +E + +G G FG V+ G + + VAIK K +C + E+ F
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREK------FL 59
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
+EA + + HP++V GV+ + P + + E G LR L ++ LD ++
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILY 116
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
A + + YL SK VH D+ N+LV+ D + K+GDFGLS+ ++ +G
Sbjct: 117 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV----KLGDFGLSRYMEDSTYYKASKG 172
Query: 1214 TLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTL 1270
LP WMAPE +N + + DV+ FG+ +WEIL G +P+ + +IG I N
Sbjct: 173 KLPIKWMAPESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 229
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P+P C LM +CWA DP RP FTE+ +L
Sbjct: 230 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 25/277 (9%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFW 1093
I+ E +E + +G G FG V+ G + + VAIK K +C + E+ F
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREK------FL 59
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
+EA + + HP++V GV+ + P + + E G LR L ++ LD ++
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILY 116
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
A + + YL SK VH D+ N+LV+ D + K+GDFGLS+ ++ +G
Sbjct: 117 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV----KLGDFGLSRYMEDSTYYKASKG 172
Query: 1214 TLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTL 1270
LP WMAPE +N + + DV+ FG+ +WEIL G +P+ + +IG I N
Sbjct: 173 KLPIKWMAPESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 229
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P+P C LM +CWA DP RP FTE+ +L
Sbjct: 230 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 25/277 (9%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFW 1093
I+ E +E + +G G FG V+ G + + VAIK K +C + E+ F
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREK------FL 59
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
+EA + + HP++V GV+ + P + + E G LR L ++ LD ++
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKFSLDLASLILY 116
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
A + + YL SK VH D+ N+LV+ D + K+GDFGLS+ ++ +G
Sbjct: 117 AYQLSTALAYLESKRFVHRDIAARNVLVSATDCV----KLGDFGLSRYMEDSTYYKASKG 172
Query: 1214 TLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTL 1270
LP WMAPE +N + + DV+ FG+ +WEIL G +P+ + +IG I N
Sbjct: 173 KLPIKWMAPESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 229
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P+P C LM +CWA DP RP FTE+ +L
Sbjct: 230 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase
Domain Of Focal Adhesion Kinase With A Phosphorylated
Activation Loop
Length = 276
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 25/277 (9%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFW 1093
I+ E +E + +G G FG V+ G + + VAIK K +C + E+ F
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREK------FL 59
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
+EA + + HP++V GV+ + P + + E G LR L ++ LD ++
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKFSLDLASLILY 116
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
A + + YL SK VH D+ N+LV+ D + K+GDFGLS+ ++ +G
Sbjct: 117 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV----KLGDFGLSRYMEDSTXXKASKG 172
Query: 1214 TLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTL 1270
LP WMAPE +N + + DV+ FG+ +WEIL G +P+ + +IG I N
Sbjct: 173 KLPIKWMAPESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 229
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P+P C LM +CWA DP RP FTE+ +L
Sbjct: 230 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 131/267 (49%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L+ +K LG+G FG V+ G W G T VAIK +K + S F EA+
Sbjct: 6 IPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES---------FLEEAQ 56
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLIIAMD 1156
I+ KL H +V Y VV + P + VTE+M GSL L E R L + +A
Sbjct: 57 IMKKLKHDKLVQLYAVVSEEP---IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQ 113
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRGT 1214
A GM Y+ N +H DL+ N+LV ICK+ DFGL+++ + T G +
Sbjct: 114 VAAGMAYIERMNYIHRDLRSANILVGNGL----ICKIADFGLARLIEDNEXTARQGAKFP 169
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ W APE + + K DV+SFGI+L E++T G PY M+ ++ V R P
Sbjct: 170 IKWTAPE--AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQ-VERGYRMP 226
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P C LM CW DP RP+F
Sbjct: 227 CPQDCPISLHELMIHCWKKDPEERPTF 253
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 130/267 (48%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I +DL LKELG+G FG V +GKWRG DVAIK IK+ G SE E F EA+
Sbjct: 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE----GSMSEDE-----FIEEAK 71
Query: 1098 ILSKLHHPNVVAFYGVV-QDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
++ L H +V YGV + P + +TE+M NG L + L ++ L + D
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRP---IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 128
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLP 1216
MEYL SK +H DL N LVN + + KV DFGLS+ + T V P
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQG----VVKVSDFGLSRYVLDDEYTSSVGSKFP 184
Query: 1217 --WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
W PE+L SK S K D+++FG+++WEI + G+ PY I LR
Sbjct: 185 VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLY 241
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P + +M CW RP+F
Sbjct: 242 RPHLASEKVYTIMYSCWHEKADERPTF 268
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 131/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 314
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + VTE+M GSL L + R +L+ +A
Sbjct: 315 VMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 371
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL+++ + T G +
Sbjct: 372 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLARLIEDNEYTARQGAK 425
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 426 FPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 482
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW +P RP+F
Sbjct: 483 MPCPPECPESLHDLMCQCWRKEPEERPTF 511
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 130/267 (48%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I +DL LKELG+G FG V +GKWRG DVAIK IK+ G SE E F EA+
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE----GSMSEDE-----FIEEAK 51
Query: 1098 ILSKLHHPNVVAFYGVV-QDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
++ L H +V YGV + P + +TE+M NG L + L ++ L + D
Sbjct: 52 VMMNLSHEKLVQLYGVCTKQRP---IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 108
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLP 1216
MEYL SK +H DL N LVN + + KV DFGLS+ + T V P
Sbjct: 109 VCEAMEYLESKQFLHRDLAARNCLVN----DQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 164
Query: 1217 --WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
W PE+L SK S K D+++FG+++WEI + G+ PY I LR
Sbjct: 165 VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLY 221
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P + +M CW RP+F
Sbjct: 222 RPHLASEKVYTIMYSCWHEKADERPTF 248
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 143/281 (50%), Gaps = 24/281 (8%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
+I +L ++E+GSG FG V+ G W D VAIK I++ G SE++ F EA
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE----GAMSEED-----FIEEA 53
Query: 1097 EILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAM 1155
E++ KL HP +V YGV ++ P + V EFM +G L L ++ L + +
Sbjct: 54 EVMMKLSHPKLVQLYGVCLEQAP---ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 110
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRG 1213
D GM YL +++H DL N LV I KV DFG+++ + T G +
Sbjct: 111 DVCEGMAYLEEASVIHRDLAARNCLVGENQVI----KVSDFGMTRFVLDDQYTSSTGTKF 166
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W +PE+ S S+ S K DV+SFG+++WE+ + G+ PY N ++ I + R
Sbjct: 167 PVKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-STGFRL 223
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAA 1313
P + +M CW P RP+F+ + R+L ++A+
Sbjct: 224 YKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-4-
Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-8-
Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 130/267 (48%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I +DL LKELG+G FG V +GKWRG DVAIK IK+ G SE E F EA+
Sbjct: 12 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE----GSMSEDE-----FIEEAK 62
Query: 1098 ILSKLHHPNVVAFYGVV-QDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
++ L H +V YGV + P + +TE+M NG L + L ++ L + D
Sbjct: 63 VMMNLSHEKLVQLYGVCTKQRP---IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 119
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLP 1216
MEYL SK +H DL N LVN + + KV DFGLS+ + T V P
Sbjct: 120 VCEAMEYLESKQFLHRDLAARNCLVN----DQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 175
Query: 1217 --WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
W PE+L SK S K D+++FG+++WEI + G+ PY I LR
Sbjct: 176 VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLY 232
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P + +M CW RP+F
Sbjct: 233 RPHLASEKVYTIMYSCWHEKADERPTF 259
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 130/267 (48%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I +DL LKELG+G FG V +GKWRG DVAIK IK+ G SE E F EA+
Sbjct: 5 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE----GSMSEDE-----FIEEAK 55
Query: 1098 ILSKLHHPNVVAFYGVV-QDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
++ L H +V YGV + P + +TE+M NG L + L ++ L + D
Sbjct: 56 VMMNLSHEKLVQLYGVCTKQRP---IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 112
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLP 1216
MEYL SK +H DL N LVN + + KV DFGLS+ + T V P
Sbjct: 113 VCEAMEYLESKQFLHRDLAARNCLVN----DQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 168
Query: 1217 --WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
W PE+L SK S K D+++FG+++WEI + G+ PY I LR
Sbjct: 169 VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLY 225
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P + +M CW RP+F
Sbjct: 226 RPHLASEKVYTIMYSCWHEKADERPTF 252
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 130/267 (48%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I +DL LKELG+G FG V +GKWRG DVAIK IK+ G SE E F EA+
Sbjct: 6 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE----GSMSEDE-----FIEEAK 56
Query: 1098 ILSKLHHPNVVAFYGVV-QDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
++ L H +V YGV + P + +TE+M NG L + L ++ L + D
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRP---IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 113
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLP 1216
MEYL SK +H DL N LVN + + KV DFGLS+ + T V P
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVN----DQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 169
Query: 1217 --WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
W PE+L SK S K D+++FG+++WEI + G+ PY I LR
Sbjct: 170 VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLY 226
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P + +M CW RP+F
Sbjct: 227 RPHLASEKVYTIMYSCWHEKADERPTF 253
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of Activation
For Tec Family Kinases
Length = 283
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 130/267 (48%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I +DL LKELG+G FG V +GKWRG DVAIK IK+ G SE E F EA+
Sbjct: 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE----GSMSEDE-----FIEEAK 71
Query: 1098 ILSKLHHPNVVAFYGVV-QDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
++ L H +V YGV + P + +TE+M NG L + L ++ L + D
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRP---IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 128
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLP 1216
MEYL SK +H DL N LVN + + KV DFGLS+ + T V P
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQG----VVKVSDFGLSRYVLDDEETSSVGSKFP 184
Query: 1217 --WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
W PE+L SK S K D+++FG+++WEI + G+ PY I LR
Sbjct: 185 VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLY 241
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P + +M CW RP+F
Sbjct: 242 RPHLASEKVYTIMYSCWHEKADERPTF 268
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 130 bits (328), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 136/268 (50%), Gaps = 22/268 (8%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK 1101
++L+ L+ +G G FG V G +RG VA+K C ++ Q F EA ++++
Sbjct: 21 KELKLLQTIGKGEFGDVMLGDYRGNKVAVK-----CIKNDATAQ-----AFLAEASVMTQ 70
Query: 1102 LHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAMDAAFG 1160
L H N+V GV+ + GG L VTE+M GSL L S+ R L L ++D
Sbjct: 71 LRHSNLVQLLGVIVEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 129
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAP 1220
MEYL N VH DL N+LV+ + + KV DFGL+K +T TG + + W AP
Sbjct: 130 MEYLEGNNFVHRDLAARNVLVSEDN----VAKVSDFGLTKEASSTQDTGKL--PVKWTAP 183
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
E L K S K DV+SFGI+LWEI + G PY + ++ V + P C
Sbjct: 184 EALR--EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-VEKGYKMDAPDGCP 240
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+M+ CW D +RPSF ++ +L
Sbjct: 241 PAVYEVMKNCWHLDAAMRPSFLQLREQL 268
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With
Imidazo[1,5-A]quinoxaline
Length = 267
Score = 130 bits (326), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 139/275 (50%), Gaps = 24/275 (8%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
+I +L ++E+GSG FG V+ G W D VAIK I++ G SE++ F EA
Sbjct: 4 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE----GAMSEED-----FIEEA 54
Query: 1097 EILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAM 1155
E++ KL HP +V YGV ++ P + VTEFM +G L L ++ L + +
Sbjct: 55 EVMMKLSHPKLVQLYGVCLEQAP---ICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL 111
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRG 1213
D GM YL ++H DL N LV I KV DFG+++ + T G +
Sbjct: 112 DVCEGMAYLEEACVIHRDLAARNCLVGENQVI----KVSDFGMTRFVLDDQYTSSTGTKF 167
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W +PE+ S S+ S K DV+SFG+++WE+ + G+ PY N ++ I + R
Sbjct: 168 PVKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-STGFRL 224
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
P + +M CW P RP+F+ + R+L
Sbjct: 225 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 130 bits (326), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 131/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 65
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + VTE+M GSL L + R +L+ +A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL+++ + T G +
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLARLIEDNEYTARQGAK 176
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 177 FPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 233
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW DP RP+F
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 129 bits (325), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 131/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 6 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 56
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + VTE+M GSL L + R +L+ +A
Sbjct: 57 VMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 113
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL+++ + T G +
Sbjct: 114 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLARLIEDNEYTARQGAK 167
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 168 FPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 224
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW DP RP+F
Sbjct: 225 MPCPPECPESLHDLMCQCWRKDPEERPTF 253
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 129 bits (325), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 136/268 (50%), Gaps = 22/268 (8%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK 1101
++L+ L+ +G G FG V G +RG VA+K C ++ Q F EA ++++
Sbjct: 6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVK-----CIKNDATAQ-----AFLAEASVMTQ 55
Query: 1102 LHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAMDAAFG 1160
L H N+V GV+ + GG L VTE+M GSL L S+ R L L ++D
Sbjct: 56 LRHSNLVQLLGVIVEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAP 1220
MEYL N VH DL N+LV+ + + KV DFGL+K +T TG + + W AP
Sbjct: 115 MEYLEGNNFVHRDLAARNVLVSEDN----VAKVSDFGLTKEASSTQDTGKL--PVKWTAP 168
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
E L K S K DV+SFGI+LWEI + G PY + ++ V + P C
Sbjct: 169 EALR--EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-VEKGYKMDAPDGCP 225
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+M+ CW D +RPSF ++ +L
Sbjct: 226 PAVYEVMKNCWHLDAAMRPSFLQLREQL 253
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 129 bits (325), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 131/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 231
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + VTE+M GSL L + R +L+ +A
Sbjct: 232 VMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL+++ + T G +
Sbjct: 289 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLARLIEDNEYTARQGAK 342
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 343 FPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 399
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW +P RP+F
Sbjct: 400 MPCPPECPESLHDLMCQCWRKEPEERPTF 428
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src, In
Complex With Amp-pnp
Length = 452
Score = 129 bits (325), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 131/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 231
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + VTE+M GSL L + R +L+ +A
Sbjct: 232 VMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL+++ + T G +
Sbjct: 289 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLARLIEDNEYTARQGAK 342
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 343 FPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 399
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW +P RP+F
Sbjct: 400 MPCPPECPESLHDLMCQCWRKEPEERPTF 428
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 131/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K G S + F +EA+
Sbjct: 182 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP----GNMSPEA-----FLQEAQ 232
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + VTE+M GSL L + R +L+ +A
Sbjct: 233 VMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 289
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL ++ + T G +
Sbjct: 290 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLGRLIEDNEYTARQGAK 343
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 344 FPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 400
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW DP RP+F
Sbjct: 401 MPCPPECPESLHDLMCQCWRKDPEERPTF 429
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
Length = 275
Score = 129 bits (324), Expect = 1e-29, Method: Composition-based stats.
Identities = 96/269 (35%), Positives = 131/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 4 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 54
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + VTE+M GSL L + R +L+ +A
Sbjct: 55 VMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 111
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL+++ + T G +
Sbjct: 112 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLARLIEDNEYTARQGAK 165
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 166 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 222
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW DP RP+F
Sbjct: 223 MPCPPECPESLHDLMCQCWRKDPEERPTF 251
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
Length = 286
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 131/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 65
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ K+ H +V Y VV + P + VTE+M GSL L + R +L+ +A
Sbjct: 66 VMKKIRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL+++ + T G +
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLARLIEDNEYTARQGAK 176
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 177 FPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 233
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW DP RP+F
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 130/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 65
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + VTE+M GSL L + R +L+ +A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL N+LV NL +CKV DFGL+++ + T G +
Sbjct: 123 IASGMAYVERMNYVHRDLAAANILVGENL------VCKVADFGLARLIEDNEYTARQGAK 176
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 177 FPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 233
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW DP RP+F
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
Length = 450
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 135/268 (50%), Gaps = 22/268 (8%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK 1101
++L+ L+ +G G FG V G +RG VA+K C ++ Q F EA ++++
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRGNKVAVK-----CIKNDATAQ-----AFLAEASVMTQ 242
Query: 1102 LHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAMDAAFG 1160
L H N+V GV+ + GG L VTE+M GSL L S+ R L L ++D
Sbjct: 243 LRHSNLVQLLGVIVEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 301
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAP 1220
MEYL N VH DL N+LV+ + + KV DFGL+K +T TG + + W AP
Sbjct: 302 MEYLEGNNFVHRDLAARNVLVSEDN----VAKVSDFGLTKEASSTQDTGKL--PVKWTAP 355
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
E L K S K DV+SFGI+LWEI + G PY + ++ V + P C
Sbjct: 356 EALR--EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-VEKGYKMDAPDGCP 412
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+M+ CW D RP+F ++ +L
Sbjct: 413 PAVYDVMKNCWHLDAATRPTFLQLREQL 440
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
Length = 266
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 138/275 (50%), Gaps = 24/275 (8%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
+I +L ++E+GSG FG V+ G W D VAIK I++ G SE++ F EA
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE----GAMSEED-----FIEEA 53
Query: 1097 EILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAM 1155
E++ KL HP +V YGV ++ P + V EFM +G L L ++ L + +
Sbjct: 54 EVMMKLSHPKLVQLYGVCLEQAP---ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 110
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRG 1213
D GM YL ++H DL N LV I KV DFG+++ + T G +
Sbjct: 111 DVCEGMAYLEEACVIHRDLAARNCLVGENQVI----KVSDFGMTRFVLDDQYTSSTGTKF 166
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W +PE+ S S+ S K DV+SFG+++WE+ + G+ PY N ++ I + R
Sbjct: 167 PVKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-STGFRL 223
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
P + +M CW P RP+F+ + R+L
Sbjct: 224 YKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 131/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 5 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 55
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + VTE+M GSL L + R +L+ +A
Sbjct: 56 VMKKLRHEKLVQLYAVVSEEP---IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 112
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL+++ + T G +
Sbjct: 113 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLARLIEDNEXTARQGAK 166
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 167 FPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 223
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW +P RP+F
Sbjct: 224 MPCPPECPESLHDLMCQCWRKEPEERPTF 252
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 138/275 (50%), Gaps = 24/275 (8%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
+I +L ++E+GSG FG V+ G W D VAIK I++ G SE++ F EA
Sbjct: 1 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE----GAMSEED-----FIEEA 51
Query: 1097 EILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAM 1155
E++ KL HP +V YGV ++ P + V EFM +G L L ++ L + +
Sbjct: 52 EVMMKLSHPKLVQLYGVCLEQAP---ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 108
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRG 1213
D GM YL ++H DL N LV I KV DFG+++ + T G +
Sbjct: 109 DVCEGMAYLEEACVIHRDLAARNCLVGENQVI----KVSDFGMTRFVLDDQYTSSTGTKF 164
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W +PE+ S S+ S K DV+SFG+++WE+ + G+ PY N ++ I + R
Sbjct: 165 PVKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-STGFRL 221
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
P + +M CW P RP+F+ + R+L
Sbjct: 222 YKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 136/268 (50%), Gaps = 22/268 (8%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK 1101
++L+ L+ +G G FG V G +RG VA+K C ++ Q F EA ++++
Sbjct: 12 KELKLLQTIGKGEFGDVMLGDYRGNKVAVK-----CIKNDATAQ-----AFLAEASVMTQ 61
Query: 1102 LHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAMDAAFG 1160
L H N+V GV+ + GG L VTE+M GSL L S+ R L L ++D
Sbjct: 62 LRHSNLVQLLGVIVEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 120
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAP 1220
MEYL N VH DL N+LV+ + + KV DFGL+K +T TG + + W AP
Sbjct: 121 MEYLEGNNFVHRDLAARNVLVSEDN----VAKVSDFGLTKEASSTQDTGKL--PVKWTAP 174
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
E L + S K DV+SFGI+LWEI + G PY + ++ V + P C
Sbjct: 175 EALR--EAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-VEKGYKMDAPDGCP 231
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+M+ CW D +RPSF ++ +L
Sbjct: 232 PAVYEVMKNCWHLDAAMRPSFLQLREQL 259
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 137/276 (49%), Gaps = 24/276 (8%)
Query: 1037 QIIKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWRE 1095
+I +L ++E+GSG FG V+ G W D VAIK IK+ G SE + F E
Sbjct: 22 MVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKE----GSMSEDD-----FIEE 72
Query: 1096 AEILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIA 1154
AE++ KL HP +V YGV ++ P + V EFM +G L L ++ L +
Sbjct: 73 AEVMMKLSHPKLVQLYGVCLEQAP---ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 129
Query: 1155 MDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
+D GM YL ++H DL N LV I KV DFG+++ + T G +
Sbjct: 130 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVI----KVSDFGMTRFVLDDQYTSSTGTK 185
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W +PE+ S S+ S K DV+SFG+++WE+ + G+ PY N ++ I + R
Sbjct: 186 FPVKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-STGFR 242
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
P + +M CW P RP+F+ + R+L
Sbjct: 243 LYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 129/267 (48%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I +DL LKELG+G FG V +GKWRG DVAIK IK+ G SE E F EA+
Sbjct: 6 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE----GSMSEDE-----FIEEAK 56
Query: 1098 ILSKLHHPNVVAFYGVV-QDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
++ L H +V YGV + P + +TE+M NG L + L ++ L + D
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRP---IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 113
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLP 1216
MEYL SK +H DL N LVN + + KV DFGLS+ + T P
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVN----DQGVVKVSDFGLSRYVLDDEYTSSRGSKFP 169
Query: 1217 --WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
W PE+L SK S K D+++FG+++WEI + G+ PY I LR
Sbjct: 170 VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLY 226
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P + +M CW RP+F
Sbjct: 227 RPHLASEKVYTIMYSCWHEKADERPTF 253
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 131/273 (47%), Gaps = 28/273 (10%)
Query: 1050 LGSGTFGTVYHGKW-----RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G+G FG V G R VAIK +K +G + +Q R +F EA I+ + H
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLK----SGYTEKQRR---DFLSEASIMGQFDH 93
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYL 1164
PNV+ GVV + +TEFM NGSL L + + + + A GM+YL
Sbjct: 94 PNVIHLEGVVTKS--TPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 151
Query: 1165 HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRGTLP--WM 1218
N VH DL N+LVN +CKV DFGLS+ + T + G +P W
Sbjct: 152 ADMNYVHRDLAARNILVNSN----LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 207
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
APE + K + DV+S+GIV+WE+++ GE PY +M +I I + PP P
Sbjct: 208 APEAIQ--YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP-PMD 264
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
C S LM CW D RP F +I L M
Sbjct: 265 CPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 130/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 65
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + V E+M GSL L + R +L+ +A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEP---IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL+++ + T G +
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLARLIEDNEXTARQGAK 176
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 177 FPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 233
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW DP RP+F
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 130/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 65
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + V E+M GSL L + R +L+ +A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEP---IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL+++ + T G +
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLARLIEDNEYTARQGAK 176
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 177 FPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 233
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW DP RP+F
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 130/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 65
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + V E+M GSL L + R +L+ +A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEP---IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL+++ + T G +
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLARLIEDNEYTARQGAK 176
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 177 FPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 233
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW DP RP+F
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 127 bits (320), Expect = 3e-29, Method: Composition-based stats.
Identities = 95/269 (35%), Positives = 131/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 8 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 58
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + VTE+M GSL L + R +L+ +A
Sbjct: 59 VMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 115
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL+++ + T G +
Sbjct: 116 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLARLIEDNEYTARQGAK 169
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 170 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 226
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW +P RP+F
Sbjct: 227 MPCPPECPESLHDLMCQCWRKEPEERPTF 255
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 138/275 (50%), Gaps = 24/275 (8%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
+I +L ++E+GSG FG V+ G W D VAIK I++ G SE++ F EA
Sbjct: 6 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE----GAMSEED-----FIEEA 56
Query: 1097 EILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAM 1155
E++ KL HP +V YGV ++ P + V EFM +G L L ++ L + +
Sbjct: 57 EVMMKLSHPKLVQLYGVCLEQAP---ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 113
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRG 1213
D GM YL ++H DL N LV I KV DFG+++ + T G +
Sbjct: 114 DVCEGMAYLEEACVIHRDLAARNCLVGENQVI----KVSDFGMTRFVLDDQYTSSTGTKF 169
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W +PE+ S S+ S K DV+SFG+++WE+ + G+ PY N ++ I + R
Sbjct: 170 PVKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-STGFRL 226
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
P + +M CW P RP+F+ + R+L
Sbjct: 227 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 142/274 (51%), Gaps = 26/274 (9%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
+ +GSG+FGTVY GKW G DVA+K + + T + + F E +L K H N+
Sbjct: 41 QRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNI 93
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ F G LA VT++ SL H L E + K + IA A GM+YLH+K
Sbjct: 94 LLFMGY---STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 150
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGG-----VRGTLPWMAPEL 1222
+I+H DLK +N+ ++ + K+GDFGL+ +K +G + G++ WMAPE+
Sbjct: 151 SIIHRDLKSNNIFLHEDLTV----KIGDFGLATVKSRW--SGSHQFEQLSGSILWMAPEV 204
Query: 1223 LNGSSSK-VSEKVDVFSFGIVLWEILTGEEPYANM-HYGAIIGGIVNNTLRP---PVPGF 1277
+ S + DV++FGIVL+E++TG+ PY+N+ + II + L P V
Sbjct: 205 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 264
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 1311
C + LM +C RP F +I + +++
Sbjct: 265 CPKAMKRLMAECLKKKRDERPLFPQILASIELLA 298
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 127 bits (319), Expect = 5e-29, Method: Composition-based stats.
Identities = 95/269 (35%), Positives = 130/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 65
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + VTE+M G L L + R +L+ +A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL+++ + T G +
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLARLIEDNEYTARQGAK 176
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 177 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 233
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW DP RP+F
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime Furopyridine
Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime Furopyridine
Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In Complex
With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In Complex
With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 142/274 (51%), Gaps = 26/274 (9%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
+ +GSG+FGTVY GKW G DVA+K + + T + + F E +L K H N+
Sbjct: 42 QRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNI 94
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ F G LA VT++ SL H L E + K + IA A GM+YLH+K
Sbjct: 95 LLFMGY---STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 151
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGG-----VRGTLPWMAPEL 1222
+I+H DLK +N+ ++ + K+GDFGL+ +K +G + G++ WMAPE+
Sbjct: 152 SIIHRDLKSNNIFLHEDLTV----KIGDFGLATVKSRW--SGSHQFEQLSGSILWMAPEV 205
Query: 1223 LNGSSSK-VSEKVDVFSFGIVLWEILTGEEPYANM-HYGAIIGGIVNNTLRP---PVPGF 1277
+ S + DV++FGIVL+E++TG+ PY+N+ + II + L P V
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 265
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 1311
C + LM +C RP F +I + +++
Sbjct: 266 CPKAMKRLMAECLKKKRDERPLFPQILASIELLA 299
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 256 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 306
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R ++ L +A
Sbjct: 307 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 364
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRG 1213
+ MEYL KN +H +L N LV + KV DFGLS++ T G +
Sbjct: 365 QISSAMEYLEKKNFIHRNLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKF 420
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 421 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 477
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 478 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 143/274 (52%), Gaps = 26/274 (9%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
+ +GSG+FGTVY GKW G DVA+K + + T + + F E +L K H N+
Sbjct: 14 QRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNI 66
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ F G LA VT++ SL H L E + K + IA A GM+YLH+K
Sbjct: 67 LLFMGY---STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGG-----VRGTLPWMAPEL 1222
+I+H DLK +N+ ++ + K+GDFGL+ +K +G + G++ WMAPE+
Sbjct: 124 SIIHRDLKSNNIFLHEDLTV----KIGDFGLATVKSRW--SGSHQFEQLSGSILWMAPEV 177
Query: 1223 LNGS-SSKVSEKVDVFSFGIVLWEILTGEEPYANM-HYGAIIGGIVNNTLRP---PVPGF 1277
+ + S + DV++FGIVL+E++TG+ PY+N+ + II + L P V
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 1311
C + LM +C RP F +I + +++
Sbjct: 238 CPKAMKRLMAECLKKKRDERPLFPQILASIELLA 271
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant)
In Complex With N6-Benzyl Adp
Length = 452
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 130/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 231
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + V E+M GSL L + R +L+ +A
Sbjct: 232 VMKKLRHEKLVQLYAVVSEEP---IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL+++ + T G +
Sbjct: 289 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLARLIEDNEYTARQGAK 342
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 343 FPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 399
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW +P RP+F
Sbjct: 400 MPCPPECPESLHDLMCQCWRKEPEERPTF 428
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 131/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 12 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 62
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + VTE+M GSL L + R +L+ ++
Sbjct: 63 VMKKLRHEKLVQLYAVVSEEP---IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ 119
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL+++ + T G +
Sbjct: 120 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLARLIEDNEYTARQGAK 173
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 174 FPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 230
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW +P RP+F
Sbjct: 231 MPCPPECPESLHDLMCQCWRKEPEERPTF 259
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 214 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 264
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R ++ L +A
Sbjct: 265 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 322
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRG 1213
+ MEYL KN +H +L N LV + KV DFGLS++ T G +
Sbjct: 323 QISSAMEYLEKKNFIHRNLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKF 378
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 379 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 435
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 436 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 127 bits (318), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 143/274 (52%), Gaps = 26/274 (9%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
+ +GSG+FGTVY GKW G DVA+K + + T + + F E +L K H N+
Sbjct: 19 QRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNI 71
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ F G LA VT++ SL H L E + K + IA A GM+YLH+K
Sbjct: 72 LLFMGY---STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 128
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGG-----VRGTLPWMAPEL 1222
+I+H DLK +N+ ++ + K+GDFGL+ +K +G + G++ WMAPE+
Sbjct: 129 SIIHRDLKSNNIFLHEDLTV----KIGDFGLATVKSRW--SGSHQFEQLSGSILWMAPEV 182
Query: 1223 LNGS-SSKVSEKVDVFSFGIVLWEILTGEEPYANM-HYGAIIGGIVNNTLRP---PVPGF 1277
+ + S + DV++FGIVL+E++TG+ PY+N+ + II + L P V
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 242
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 1311
C + LM +C RP F +I + +++
Sbjct: 243 CPKAMKRLMAECLKKKRDERPLFPQILASIELLA 276
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A
[1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With A
[1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 143/274 (52%), Gaps = 26/274 (9%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
+ +GSG+FGTVY GKW G DVA+K + + T + + F E +L K H N+
Sbjct: 19 QRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNI 71
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ F G LA VT++ SL H L E + K + IA A GM+YLH+K
Sbjct: 72 LLFMGY---STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 128
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGG-----VRGTLPWMAPEL 1222
+I+H DLK +N+ ++ + K+GDFGL+ +K +G + G++ WMAPE+
Sbjct: 129 SIIHRDLKSNNIFLHEDLTV----KIGDFGLATVKSRW--SGSHQFEQLSGSILWMAPEV 182
Query: 1223 LNGS-SSKVSEKVDVFSFGIVLWEILTGEEPYANM-HYGAIIGGIVNNTLRP---PVPGF 1277
+ + S + DV++FGIVL+E++TG+ PY+N+ + II + L P V
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 242
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 1311
C + LM +C RP F +I + +++
Sbjct: 243 CPKAMKRLMAECLKKKRDERPLFPQILASIELLA 276
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 132/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 267
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R + L +A
Sbjct: 268 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 325
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRG 1213
+ MEYL KN +H +L N LV + KV DFGLS++ T G +
Sbjct: 326 QISSAMEYLEKKNFIHRNLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKF 381
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 382 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 438
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene
Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene
Inhibitor
Length = 282
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 143/274 (52%), Gaps = 26/274 (9%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
+ +GSG+FGTVY GKW G DVA+K + + T + + F E +L K H N+
Sbjct: 16 QRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNI 68
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ F G LA VT++ SL H L E + K + IA A GM+YLH+K
Sbjct: 69 LLFMGY---STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 125
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGG-----VRGTLPWMAPEL 1222
+I+H DLK +N+ ++ + K+GDFGL+ +K +G + G++ WMAPE+
Sbjct: 126 SIIHRDLKSNNIFLHEDLTV----KIGDFGLATVKSRW--SGSHQFEQLSGSILWMAPEV 179
Query: 1223 LNGS-SSKVSEKVDVFSFGIVLWEILTGEEPYANM-HYGAIIGGIVNNTLRP---PVPGF 1277
+ + S + DV++FGIVL+E++TG+ PY+N+ + II + L P V
Sbjct: 180 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 239
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 1311
C + LM +C RP F +I + +++
Sbjct: 240 CPKAMKRLMAECLKKKRDERPLFPQILASIELLA 273
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
Length = 293
Score = 126 bits (316), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 65
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R ++ L +A
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 180 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 236
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 126 bits (316), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 143/274 (52%), Gaps = 26/274 (9%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
+ +GSG+FGTVY GKW G DVA+K + + T + + F E +L K H N+
Sbjct: 14 QRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNI 66
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ F G LA VT++ SL H L E + K + IA A GM+YLH+K
Sbjct: 67 LLFMGY---STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGG-----VRGTLPWMAPEL 1222
+I+H DLK +N+ ++ + K+GDFGL+ +K +G + G++ WMAPE+
Sbjct: 124 SIIHRDLKSNNIFLHEDLTV----KIGDFGLATVKSRW--SGSHQFEQLSGSILWMAPEV 177
Query: 1223 LNGS-SSKVSEKVDVFSFGIVLWEILTGEEPYANM-HYGAIIGGIVNNTLRP---PVPGF 1277
+ + S + DV++FGIVL+E++TG+ PY+N+ + II + L P V
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 1311
C + LM +C RP F +I + +++
Sbjct: 238 CPKAMKRLMAECLKKKRDERPLFPQILASIELLA 271
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl
Mutant In Complex With The Aurora Kinase Inhibitor Vx-680
Length = 287
Score = 126 bits (316), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 11 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 61
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R ++ L +A
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAPAGAKF 175
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 176 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 232
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 233 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 131/269 (48%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 12 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 62
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + VTE+M GSL L + R +L+ ++
Sbjct: 63 VMKKLRHEKLVQLYAVVSEEP---IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ 119
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL+++ + T G +
Sbjct: 120 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLARLIEDNEWTARQGAK 173
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 174 FPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 230
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW +P RP+F
Sbjct: 231 MPCPPECPESLHDLMCQCWRKEPEERPTF 259
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
Length = 287
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 62
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R ++ L +A
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAPAGAKF 176
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 177 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 233
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 234 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 62
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R ++ L +A
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKF 176
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 177 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 233
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 234 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 62
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R ++ L +A
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKF 176
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 177 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 233
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 234 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
Length = 293
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 132/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 65
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R + L +A
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 123
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 180 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 236
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dp- 987
Length = 277
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 65
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R ++ L +A
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 180 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 236
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 23 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 73
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R ++ L +A
Sbjct: 74 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 131
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 132 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKF 187
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 188 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 244
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 245 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 65
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R ++ L +A
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTXTAHAGAKF 179
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 180 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 236
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 14 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 64
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R ++ L +A
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 122
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 123 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKF 178
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 179 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 235
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 236 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out
Inhibitor Ap24534
Length = 284
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 132/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 60
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R + L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 175 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 231
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 125 bits (314), Expect = 2e-28, Method: Composition-based stats.
Identities = 94/269 (34%), Positives = 129/269 (47%), Gaps = 28/269 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L +LG G FG V+ G W GT VAIK +K + + F +EA+
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---------FLQEAQ 65
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ KL H +V Y VV + P + V E+M G L L + R +L+ +A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEP---IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRNTLVTG--GVR 1212
A GM Y+ N VH DL+ N+LV NL +CKV DFGL+++ + T G +
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENL------VCKVADFGLARLIEDNEYTARQGAK 176
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLR 1271
+ W APE + + K DV+SFGI+L E+ T G PY M ++ V R
Sbjct: 177 FPIKWTAPEA--ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYR 233
Query: 1272 PPVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P P C LM QCW DP RP+F
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 128/272 (47%), Gaps = 30/272 (11%)
Query: 1048 KELGSGTFGTVYHGKWR-----GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +GSG G V +G+ R VAIK +K G + Q R +F EA I+ +
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK----AGYTERQRR---DFLSEASIMGQF 107
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV G + VTE+M NGSL L + + + + + GM
Sbjct: 108 DHPNIIRLEGVVTRGRLAMI--VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 1163 YLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLP 1216
YL VH DL N+LV NL +CKV DFGLS++ + T G + +
Sbjct: 166 YLSDLGYVHRDLAARNVLVDSNL------VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR 219
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVP 1275
W APE + + S DV+SFG+V+WE+L GE PY NM +I V R P P
Sbjct: 220 WTAPEAI--AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS-VEEGYRLPAP 276
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C LM CW D RP F++I L
Sbjct: 277 MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 132/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 60
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R + L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 175 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 231
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 130/273 (47%), Gaps = 28/273 (10%)
Query: 1050 LGSGTFGTVYHGKW-----RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G+G FG V G R VAIK +K +G + +Q R +F EA I+ + H
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLK----SGYTEKQRR---DFLSEASIMGQFDH 67
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYL 1164
PNV+ GVV + +TEFM NGSL L + + + + A GM+YL
Sbjct: 68 PNVIHLEGVVTKST--PVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 125
Query: 1165 HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRGTLP--WM 1218
N VH L N+LVN +CKV DFGLS+ + T + G +P W
Sbjct: 126 ADMNYVHRALAARNILVNSN----LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 181
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
APE + K + DV+S+GIV+WE+++ GE PY +M +I I + PP P
Sbjct: 182 APEAIQ--YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP-PMD 238
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
C S LM CW D RP F +I L M
Sbjct: 239 CPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 128/272 (47%), Gaps = 30/272 (11%)
Query: 1048 KELGSGTFGTVYHGKWR-----GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +GSG G V +G+ R VAIK +K G + Q R +F EA I+ +
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK----AGYTERQRR---DFLSEASIMGQF 107
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV G + VTE+M NGSL L + + + + + GM
Sbjct: 108 DHPNIIRLEGVVTRGRLAMI--VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 1163 YLHSKNIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLP 1216
YL VH DL N+LV NL +CKV DFGLS++ + T G + +
Sbjct: 166 YLSDLGYVHRDLAARNVLVDSNL------VCKVSDFGLSRVLEDDPDAAXTTTGGKIPIR 219
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVP 1275
W APE + + S DV+SFG+V+WE+L GE PY NM +I V R P P
Sbjct: 220 WTAPEAI--AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS-VEEGYRLPAP 276
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C LM CW D RP F++I L
Sbjct: 277 MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 132/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G FG VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 8 MERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 58
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R + L +A
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 173 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY-ELLEKDYRM 229
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 141/274 (51%), Gaps = 26/274 (9%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
+ +GSG+FGTVY GKW G DVA+K + + T + + F E +L K H N+
Sbjct: 42 QRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNI 94
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ F G LA VT++ SL H L E + K + IA A GM+YLH+K
Sbjct: 95 LLFMGY---STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 151
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGG-----VRGTLPWMAPEL 1222
+I+H DLK +N+ ++ + K+GDFGL+ K +G + G++ WMAPE+
Sbjct: 152 SIIHRDLKSNNIFLHEDLTV----KIGDFGLATEKSRW--SGSHQFEQLSGSILWMAPEV 205
Query: 1223 LNGSSSK-VSEKVDVFSFGIVLWEILTGEEPYANM-HYGAIIGGIVNNTLRP---PVPGF 1277
+ S + DV++FGIVL+E++TG+ PY+N+ + II + L P V
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 265
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 1311
C + LM +C RP F +I + +++
Sbjct: 266 CPKAMKRLMAECLKKKRDERPLFPQILASIELLA 299
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 60
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R ++ L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 175 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 231
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 141/274 (51%), Gaps = 26/274 (9%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
+ +GSG+FGTVY GKW G DVA+K + + T + + F E +L K H N+
Sbjct: 34 QRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNI 86
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ F G LA VT++ SL H L E + K + IA A GM+YLH+K
Sbjct: 87 LLFMGY---STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 143
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGG-----VRGTLPWMAPEL 1222
+I+H DLK +N+ ++ + K+GDFGL+ K +G + G++ WMAPE+
Sbjct: 144 SIIHRDLKSNNIFLHEDLTV----KIGDFGLATEKSRW--SGSHQFEQLSGSILWMAPEV 197
Query: 1223 LNGSSSK-VSEKVDVFSFGIVLWEILTGEEPYANM-HYGAIIGGIVNNTLRP---PVPGF 1277
+ S + DV++FGIVL+E++TG+ PY+N+ + II + L P V
Sbjct: 198 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 257
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 1311
C + LM +C RP F +I + +++
Sbjct: 258 CPKAMKRLMAECLKKKRDERPLFPQILASIELLA 291
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 132/270 (48%), Gaps = 24/270 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKW-RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L+ K+LG+G FG V+ + + T VA+K +K + + F EA
Sbjct: 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---------FLAEAN 235
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ L H +V + VV P + +TEFM GSL L S E +LI +
Sbjct: 236 VMKTLQHDKLVKLHAVVTKEP---IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 292
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRGT 1214
A GM ++ +N +H DL+ N+LV+ +CK+ DFGL+++ + T G +
Sbjct: 293 IAEGMAFIEQRNYIHRDLRAANILVSAS----LVCKIADFGLARVIEDNEYTAREGAKFP 348
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ W APE +N S + K DV+SFGI+L EI+T G PY M +I + R P
Sbjct: 349 IKWTAPEAINFGSFTI--KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL-ERGYRMP 405
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
P C E +M +CW P RP+F I
Sbjct: 406 RPENCPEELYNIMMRCWKNRPEERPTFEYI 435
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 124 bits (311), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 60
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R ++ L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 175 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 231
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ L++LG G FG+V ++ G VA+K+++ S + E R +F RE E
Sbjct: 15 LKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----TEEHLR---DFEREIE 66
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L H N+V + GV L + EF+ GSLR L + +D K L
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQI 126
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GMEYL +K +H DL N+LV ++ + K+GDFGL+K+ K V
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRV----KIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----------------GEEPYANMH 1257
+ W APE L + SK S DV+SFG+VL+E+ T G + M
Sbjct: 183 PIFWYAPESL--TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 240
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+I + NN R P P C E ++M +CW + RPSF ++A R+
Sbjct: 241 VFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 289
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 132/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 8 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 58
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P +TEFM G+L L R + L +A
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTFTAHAGAKF 172
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 173 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY-ELLEKDYRM 229
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 142/274 (51%), Gaps = 26/274 (9%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
+ +GSG+FGTVY GKW G DVA+K + + T + + F E +L K H N+
Sbjct: 14 QRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQ------AFKNEVGVLRKTRHVNI 66
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ F G LA VT++ SL H L E + K + IA A GM+YLH+K
Sbjct: 67 LLFMGY---STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGG-----VRGTLPWMAPEL 1222
+I+H DLK +N+ ++ + K+GDFGL+ K +G + G++ WMAPE+
Sbjct: 124 SIIHRDLKSNNIFLHEDLTV----KIGDFGLATEKSRW--SGSHQFEQLSGSILWMAPEV 177
Query: 1223 LNGS-SSKVSEKVDVFSFGIVLWEILTGEEPYANM-HYGAIIGGIVNNTLRP---PVPGF 1277
+ + S + DV++FGIVL+E++TG+ PY+N+ + II + L P V
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 1311
C + LM +C RP F +I + +++
Sbjct: 238 CPKAMKRLMAECLKKKRDERPLFPQILASIELLA 271
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 132/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 65
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P + EFM G+L L R ++ L +A
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREP--PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 180 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 236
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 123 bits (308), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 132/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 11 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 61
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P + EFM G+L L R ++ L +A
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREP--PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTXTAHAGAKF 175
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 176 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 232
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 233 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 123 bits (308), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 131/273 (47%), Gaps = 28/273 (10%)
Query: 1050 LGSGTFGTVYHGKWRG-----TDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G+G FG V G+ + + VAIK +K G + Q R EF EA I+ + H
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKG----GYTERQRR---EFLSEASIMGQFEH 76
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYL 1164
PN++ GVV + + +TEFM NG+L L + + + + A GM YL
Sbjct: 77 PNIIRLEGVVTN--SMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 134
Query: 1165 HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRGTLP--WM 1218
+ VH DL N+LVN +CKV DFGLS+ + T + G +P W
Sbjct: 135 AEMSYVHRDLAARNILVNSN----LVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT 190
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
APE + + K + D +S+GIV+WE+++ GE PY +M +I I + PP P
Sbjct: 191 APEAI--AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPD- 247
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
C + LM CW D RP F ++ L M
Sbjct: 248 CPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 126/265 (47%), Gaps = 26/265 (9%)
Query: 1050 LGSGTFGTVYHGKW-----RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G+G FG V G+ R VAIK +K G + +Q R +F EA I+ + H
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLK----VGYTEKQRR---DFLCEASIMGQFDH 103
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYL 1164
PNVV GVV G + V EFM NG+L L + + + + A GM YL
Sbjct: 104 PNVVHLEGVVTRGK--PVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL 161
Query: 1165 HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWMAP 1220
VH DL N+LVN +CKV DFGLS++ + T G + + W AP
Sbjct: 162 ADMGYVHRDLAARNILVNSN----LVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAP 217
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
E + K + DV+S+GIV+WE+++ GE PY +M +I I R P P C
Sbjct: 218 EAIQ--YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI-EEGYRLPAPMDCP 274
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEIA 1304
+ LM CW + RP F +I
Sbjct: 275 AGLHQLMLDCWQKERAERPKFEQIV 299
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 131/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 60
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P + EFM G+L L R + L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREP--PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 175 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 231
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 131/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 60
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P + EFM G+L L R + L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREP--PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 175 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRM 231
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 122 bits (307), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 130/268 (48%), Gaps = 30/268 (11%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKW-RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L+ K+LG+G FG V+ + + T VA+K +K + + F EA
Sbjct: 179 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---------FLAEAN 229
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ L H +V + VV P + +TEFM GSL L S E +LI +
Sbjct: 230 VMKTLQHDKLVKLHAVVTKEP---IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 286
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLP 1216
A GM ++ +N +H DL+ N+LV+ +CK+ DFGL+++ G + +
Sbjct: 287 IAEGMAFIEQRNYIHRDLRAANILVSAS----LVCKIADFGLARV--------GAKFPIK 334
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVP 1275
W APE +N S + K DV+SFGI+L EI+T G PY M +I + R P P
Sbjct: 335 WTAPEAINFGSFTI--KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL-ERGYRMPRP 391
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
C E +M +CW P RP+F I
Sbjct: 392 ENCPEELYNIMMRCWKNRPEERPTFEYI 419
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 131/273 (47%), Gaps = 28/273 (10%)
Query: 1050 LGSGTFGTVYHGKWRG-----TDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G+G FG V G+ + + VAIK +K G + Q R EF EA I+ + H
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKG----GYTERQRR---EFLSEASIMGQFEH 74
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYL 1164
PN++ GVV + + +TEFM NG+L L + + + + A GM YL
Sbjct: 75 PNIIRLEGVVTN--SMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 132
Query: 1165 HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRGTLP--WM 1218
+ VH DL N+LVN +CKV DFGLS+ + T + G +P W
Sbjct: 133 AEMSYVHRDLAARNILVNSN----LVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT 188
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
APE + + K + D +S+GIV+WE+++ GE PY +M +I I + PP P
Sbjct: 189 APEAI--AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPD- 245
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
C + LM CW D RP F ++ L M
Sbjct: 246 CPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ L++LG G FG+V ++ G VA+K+++ S + E R +F RE E
Sbjct: 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----TEEHLR---DFEREIE 94
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L H N+V + GV L + E++ GSLR L + +D K L
Sbjct: 95 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 154
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GMEYL +K +H DL N+LV ++ + K+GDFGL+K+ K V
Sbjct: 155 CKGMEYLGTKRYIHRDLATRNILVENENRV----KIGDFGLTKVLPQDKEXXKVKEPGES 210
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----------------GEEPYANMH 1257
+ W APE L + SK S DV+SFG+VL+E+ T G + M
Sbjct: 211 PIFWYAPESL--TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 268
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+I + NN R P P C E ++M +CW + RPSF ++A R+
Sbjct: 269 VFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 317
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ L++LG G FG+V ++ G VA+K+++ S + E R +F RE E
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----TEEHLR---DFEREIE 66
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L H N+V + GV L + E++ GSLR L + +D K L
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 126
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GMEYL +K +H DL N+LV ++ + K+GDFGL+K+ K V
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRV----KIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----------------GEEPYANMH 1257
+ W APE L + SK S DV+SFG+VL+E+ T G + M
Sbjct: 183 PIFWYAPESL--TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 240
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+I + NN R P P C E ++M +CW + RPSF ++A R+
Sbjct: 241 VFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 289
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ L++LG G FG+V ++ G VA+K+++ S + E R +F RE E
Sbjct: 19 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----TEEHLR---DFEREIE 70
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L H N+V + GV L + E++ GSLR L + +D K L
Sbjct: 71 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 130
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GMEYL +K +H DL N+LV ++ + K+GDFGL+K+ K V
Sbjct: 131 CKGMEYLGTKRYIHRDLATRNILVENENRV----KIGDFGLTKVLPQDKEXXKVKEPGES 186
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----------------GEEPYANMH 1257
+ W APE L + SK S DV+SFG+VL+E+ T G + M
Sbjct: 187 PIFWYAPESL--TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 244
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+I + NN R P P C E ++M +CW + RPSF ++A R+
Sbjct: 245 VFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 293
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ L++LG G FG+V ++ G VA+K+++ S + E R +F RE E
Sbjct: 17 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----TEEHLR---DFEREIE 68
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L H N+V + GV L + E++ GSLR L + +D K L
Sbjct: 69 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 128
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GMEYL +K +H DL N+LV ++ + K+GDFGL+K+ K V
Sbjct: 129 CKGMEYLGTKRYIHRDLATRNILVENENRV----KIGDFGLTKVLPQDKEXXKVKEPGES 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----------------GEEPYANMH 1257
+ W APE L + SK S DV+SFG+VL+E+ T G + M
Sbjct: 185 PIFWYAPESL--TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 242
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+I + NN R P P C E ++M +CW + RPSF ++A R+
Sbjct: 243 VFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 291
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 132/270 (48%), Gaps = 24/270 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKW-RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E L+ K+LG+G FG V+ + + T VA+K +K + + F EA
Sbjct: 12 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---------FLAEAN 62
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMD 1156
++ L H +V + VV P + +TEFM GSL L S E +LI +
Sbjct: 63 VMKTLQHDKLVKLHAVVTKEP---IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 119
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRGT 1214
A GM ++ +N +H DL+ N+LV+ +CK+ DFGL+++ + T G +
Sbjct: 120 IAEGMAFIEQRNYIHRDLRAANILVSASL----VCKIADFGLARVIEDNEYTAREGAKFP 175
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ W APE +N S + K DV+SFGI+L EI+T G PY M +I + R P
Sbjct: 176 IKWTAPEAINFGSFTI--KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL-ERGYRMP 232
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
P C E +M +CW P RP+F I
Sbjct: 233 RPENCPEELYNIMMRCWKNRPEERPTFEYI 262
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ L++LG G FG+V ++ G VA+K+++ S + E R +F RE E
Sbjct: 18 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----TEEHLR---DFEREIE 69
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L H N+V + GV L + E++ GSLR L + +D K L
Sbjct: 70 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 129
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GMEYL +K +H DL N+LV ++ + K+GDFGL+K+ K V
Sbjct: 130 CKGMEYLGTKRYIHRDLATRNILVENENRV----KIGDFGLTKVLPQDKEXXKVKEPGES 185
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----------------GEEPYANMH 1257
+ W APE L + SK S DV+SFG+VL+E+ T G + M
Sbjct: 186 PIFWYAPESL--TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 243
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+I + NN R P P C E ++M +CW + RPSF ++A R+
Sbjct: 244 VFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 292
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl
Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl
Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ L++LG G FG+V ++ G VA+K+++ S + E R +F RE E
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----TEEHLR---DFEREIE 63
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L H N+V + GV L + E++ GSLR L + +D K L
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GMEYL +K +H DL N+LV ++ + K+GDFGL+K+ K V
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRV----KIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----------------GEEPYANMH 1257
+ W APE L + SK S DV+SFG+VL+E+ T G + M
Sbjct: 180 PIFWYAPESL--TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 237
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+I + NN R P P C E ++M +CW + RPSF ++A R+
Sbjct: 238 VFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ L++LG G FG+V ++ G VA+K+++ S + E R +F RE E
Sbjct: 11 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----TEEHLR---DFEREIE 62
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L H N+V + GV L + E++ GSLR L + +D K L
Sbjct: 63 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 122
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GMEYL +K +H DL N+LV ++ + K+GDFGL+K+ K V
Sbjct: 123 CKGMEYLGTKRYIHRDLATRNILVENENRV----KIGDFGLTKVLPQDKEXXKVKEPGES 178
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----------------GEEPYANMH 1257
+ W APE L + SK S DV+SFG+VL+E+ T G + M
Sbjct: 179 PIFWYAPESL--TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 236
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+I + NN R P P C E ++M +CW + RPSF ++A R+
Sbjct: 237 VFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 285
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor
Length = 301
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ L++LG G FG+V ++ G VA+K+++ S + E R +F RE E
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----TEEHLR---DFEREIE 63
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L H N+V + GV L + E++ GSLR L + +D K L
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GMEYL +K +H DL N+LV ++ + K+GDFGL+K+ K V
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRV----KIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----------------GEEPYANMH 1257
+ W APE L + SK S DV+SFG+VL+E+ T G + M
Sbjct: 180 PIFWYAPESL--TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 237
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+I + NN R P P C E ++M +CW + RPSF ++A R+
Sbjct: 238 VFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ L++LG G FG+V ++ G VA+K+++ S + E R +F RE E
Sbjct: 10 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----TEEHLR---DFEREIE 61
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L H N+V + GV L + E++ GSLR L + +D K L
Sbjct: 62 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 121
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GMEYL +K +H DL N+LV ++ + K+GDFGL+K+ K V
Sbjct: 122 CKGMEYLGTKRYIHRDLATRNILVENENRV----KIGDFGLTKVLPQDKEXXKVKEPGES 177
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----------------GEEPYANMH 1257
+ W APE L + SK S DV+SFG+VL+E+ T G + M
Sbjct: 178 PIFWYAPESL--TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 235
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+I + NN R P P C E ++M +CW + RPSF ++A R+
Sbjct: 236 VFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 284
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ L++LG G FG+V ++ G VA+K+++ S + E R +F RE E
Sbjct: 16 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----TEEHLR---DFEREIE 67
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L H N+V + GV L + E++ GSLR L + +D K L
Sbjct: 68 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 127
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GMEYL +K +H DL N+LV ++ + K+GDFGL+K+ K V
Sbjct: 128 CKGMEYLGTKRYIHRDLATRNILVENENRV----KIGDFGLTKVLPQDKEXXKVKEPGES 183
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----------------GEEPYANMH 1257
+ W APE L + SK S DV+SFG+VL+E+ T G + M
Sbjct: 184 PIFWYAPESL--TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 241
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+I + NN R P P C E ++M +CW + RPSF ++A R+
Sbjct: 242 VFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 290
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ L++LG G FG+V ++ G VA+K+++ S + E R +F RE E
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----TEEHLR---DFEREIE 66
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L H N+V + GV L + E++ GSLR L + +D K L
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQI 126
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GMEYL +K +H DL N+LV ++ + K+GDFGL+K+ K V
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRV----KIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----------------GEEPYANMH 1257
+ W APE L + SK S DV+SFG+VL+E+ T G + M
Sbjct: 183 PIFWYAPESL--TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 240
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+I + NN R P P C E ++M +CW + RPSF ++A R+
Sbjct: 241 VFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 289
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ L++LG G FG+V ++ G VA+K+++ S + E R +F RE E
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----TEEHLR---DFEREIE 81
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L H N+V + GV L + E++ GSLR L + +D K L
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 141
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GMEYL +K +H DL N+LV ++ + K+GDFGL+K+ K V
Sbjct: 142 CKGMEYLGTKRYIHRDLATRNILVENENRV----KIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----------------GEEPYANMH 1257
+ W APE L + SK S DV+SFG+VL+E+ T G + M
Sbjct: 198 PIFWYAPESL--TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 255
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+I + NN R P P C E ++M +CW + RPSF ++A R+
Sbjct: 256 VFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 304
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ L++LG G FG+V ++ G VA+K+++ S + E R +F RE E
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----TEEHLR---DFEREIE 81
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L H N+V + GV L + E++ GSLR L + +D K L
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 141
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GMEYL +K +H DL N+LV ++ + K+GDFGL+K+ K V
Sbjct: 142 CKGMEYLGTKRYIHRDLATRNILVENENRV----KIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----------------GEEPYANMH 1257
+ W APE L + SK S DV+SFG+VL+E+ T G + M
Sbjct: 198 PIFWYAPESL--TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 255
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+I + NN R P P C E ++M +CW + RPSF ++A R+
Sbjct: 256 VFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 304
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 1048 KELGSGTFGTVYHGKWR-----GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +G+G FG V G+ + VAIK +K G + +Q R +F EA I+ +
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRR---DFLGEASIMGQF 103
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV + VTE+M NGSL L + + + + A GM+
Sbjct: 104 DHPNIIRLEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWM 1218
YL VH DL N+L+N +CKV DFGLS++ + T G + + W
Sbjct: 162 YLSDMGFVHRDLAARNILINSN----LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
+PE + + K + DV+S+GIVLWE+++ GE PY M +I V+ R P P
Sbjct: 218 SPEAI--AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLPPPMD 274
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C + LM CW D RP F +I L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+ E L+ ++ LG+G FG V+ G + G T VA+K +K+ + + F EA
Sbjct: 20 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---------FLAEAN 70
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLIIAMD 1156
++ +L H +V Y VV P + +TE+M NGSL L + L K L +A
Sbjct: 71 LMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 127
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRGT 1214
A GM ++ +N +H DL+ N+LV+ D + CK+ DFGL+++ + T G +
Sbjct: 128 IAEGMAFIEERNYIHRDLRAANILVS--DTLS--CKIADFGLARLIEDNEYTAREGAKFP 183
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ W APE +N + + K DV+SFGI+L EI+T G PY M +I + R
Sbjct: 184 IKWTAPEAINYGTFTI--KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMV 240
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P C E LM CW P RP+F
Sbjct: 241 RPDNCPEELYQLMRLCWKERPEDRPTF 267
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 131/278 (47%), Gaps = 24/278 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ D+ +LG G +G VY G W+ VA+K +K+ + E E EF +EA
Sbjct: 8 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVE----EFLKEA 58
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAM 1155
++ ++ HPN+V GV P + EFM G+L L R + L +A
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREP--PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRG 1213
+ MEYL KN +H DL N LV + KV DFGLS++ T G +
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE L + +K S K DV++FG++LWEI T G PY + + ++ R
Sbjct: 173 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY-ELLEKDYRM 229
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
P C + LM CW +P RPSF EI + M
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Phosphorylated,
Amp-pnp Bound
Length = 373
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 1048 KELGSGTFGTVYHGKWR-----GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +G+G FG V G+ + VAIK +K G + +Q R +F EA I+ +
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRR---DFLGEASIMGQF 103
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV + VTE+M NGSL L + + + + A GM+
Sbjct: 104 DHPNIIRLEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWM 1218
YL VH DL N+L+N +CKV DFGLS++ + T G + + W
Sbjct: 162 YLSDMGYVHRDLAARNILINSN----LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
+PE + + K + DV+S+GIVLWE+++ GE PY M +I V+ R P P
Sbjct: 218 SPEAI--AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLPPPMD 274
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C + LM CW D RP F +I L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
Length = 285
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+ E L+ ++ LG+G FG V+ G + G T VA+K +K+ + + F EA
Sbjct: 16 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---------FLAEAN 66
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLIIAMD 1156
++ +L H +V Y VV P + +TE+M NGSL L + L K L +A
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 123
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRGT 1214
A GM ++ +N +H DL+ N+LV+ D + CK+ DFGL+++ + T G +
Sbjct: 124 IAEGMAFIEERNYIHRDLRAANILVS--DTLS--CKIADFGLARLIEDNEXTAREGAKFP 179
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ W APE +N + + K DV+SFGI+L EI+T G PY M +I + R
Sbjct: 180 IKWTAPEAINYGTFTI--KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMV 236
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P C E LM CW P RP+F
Sbjct: 237 RPDNCPEELYQLMRLCWKERPEDRPTF 263
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor
Nvp-Bbt594
Length = 295
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ L++LG G FG+V ++ G VA+K+++ S + E R +F RE E
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----TEEHLR---DFEREIE 63
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L H N+V + GV L + E++ GSLR L + +D K L
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GMEYL +K +H DL N+LV ++ + K+GDFGL+K+ K V
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRV----KIGDFGLTKVLPQDKEFFKVKEPGES 179
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----------------GEEPYANMH 1257
+ W APE L + SK S DV+SFG+VL+E+ T G + M
Sbjct: 180 PIFWYAPESL--TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 237
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+I + NN R P P C E ++M +CW + RPSF ++A R+
Sbjct: 238 VFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+ E L+ ++ LG+G FG V+ G + G T VA+K +K+ + + F EA
Sbjct: 18 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---------FLAEAN 68
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLIIAMD 1156
++ +L H +V Y VV P + +TE+M NGSL L + L K L +A
Sbjct: 69 LMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 125
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRGT 1214
A GM ++ +N +H DL+ N+LV+ D + CK+ DFGL+++ + T G +
Sbjct: 126 IAEGMAFIEERNYIHRDLRAANILVS--DTLS--CKIADFGLARLIEDNEXTAREGAKFP 181
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ W APE +N + + K DV+SFGI+L EI+T G PY M +I + R
Sbjct: 182 IKWTAPEAINYGTFTI--KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMV 238
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P C E LM CW P RP+F
Sbjct: 239 RPDNCPEELYQLMRLCWKERPEDRPTF 265
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 1048 KELGSGTFGTVYHGKWR-----GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +G+G FG V G+ + VAIK +K G + +Q R +F EA I+ +
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRR---DFLGEASIMGQF 101
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV + VTE+M NGSL L + + + + A GM+
Sbjct: 102 DHPNIIRLEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 159
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWM 1218
YL VH DL N+L+N +CKV DFGLS++ + T G + + W
Sbjct: 160 YLSDMGYVHRDLAARNILINSN----LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 215
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
+PE + + K + DV+S+GIVLWE+++ GE PY M +I V+ R P P
Sbjct: 216 SPEAI--AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLPPPMD 272
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C + LM CW D RP F +I L
Sbjct: 273 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 1048 KELGSGTFGTVYHGKWR-----GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +G+G FG V G+ + VAIK +K G + +Q R +F EA I+ +
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRR---DFLGEASIMGQF 103
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV + VTE+M NGSL L + + + + A GM+
Sbjct: 104 DHPNIIRLEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWM 1218
YL VH DL N+L+N +CKV DFGLS++ + T G + + W
Sbjct: 162 YLSDMGYVHRDLAARNILINSN----LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
+PE + + K + DV+S+GIVLWE+++ GE PY M +I V+ R P P
Sbjct: 218 SPEAI--AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLPPPMD 274
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C + LM CW D RP F +I L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 1048 KELGSGTFGTVYHGKWR-----GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +G+G FG V G+ + VAIK +K G + +Q R +F EA I+ +
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRR---DFLGEASIMGQF 103
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV + VTE+M NGSL L + + + + A GM+
Sbjct: 104 DHPNIIRLEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWM 1218
YL VH DL N+L+N +CKV DFGLS++ + T G + + W
Sbjct: 162 YLSDMGYVHRDLAARNILINSN----LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
+PE + + K + DV+S+GIVLWE+++ GE PY M +I V+ R P P
Sbjct: 218 SPEAI--AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLPPPMD 274
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C + LM CW D RP F +I L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 1048 KELGSGTFGTVYHGKWR-----GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +G+G FG V G+ + VAIK +K G + +Q R +F EA I+ +
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRR---DFLGEASIMGQF 74
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV + VTE+M NGSL L + + + + A GM+
Sbjct: 75 DHPNIIRLEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWM 1218
YL VH DL N+L+N +CKV DFGLS++ + T G + + W
Sbjct: 133 YLSDMGYVHRDLAARNILINSN----LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
+PE + + K + DV+S+GIVLWE+++ GE PY M +I V+ R P P
Sbjct: 189 SPEAI--AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLPPPMD 245
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C + LM CW D RP F +I L
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 1048 KELGSGTFGTVYHGKWR-----GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +G+G FG V G+ + VAIK +K G + +Q R +F EA I+ +
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRR---DFLGEASIMGQF 103
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV + VTE+M NGSL L + + + + A GM+
Sbjct: 104 DHPNIIRLEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWM 1218
YL VH DL N+L+N +CKV DFGLS++ + T G + + W
Sbjct: 162 YLSDMGYVHRDLAARNILINSN----LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
+PE + + K + DV+S+GIVLWE+++ GE PY M +I V+ R P P
Sbjct: 218 SPEAI--AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLPPPMD 274
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C + LM CW D RP F +I L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii-
38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 1048 KELGSGTFGTVYHGKWR-----GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +G+G FG V G+ + VAIK +K G + +Q R +F EA I+ +
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRR---DFLGEASIMGQF 91
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV + VTE+M NGSL L + + + + A GM+
Sbjct: 92 DHPNIIRLEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 149
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWM 1218
YL VH DL N+L+N +CKV DFGLS++ + T G + + W
Sbjct: 150 YLSDMGYVHRDLAARNILINSN----LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 205
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
+PE + + K + DV+S+GIVLWE+++ GE PY M +I V+ R P P
Sbjct: 206 SPEAI--AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLPPPMD 262
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C + LM CW D RP F +I L
Sbjct: 263 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 140/269 (52%), Gaps = 22/269 (8%)
Query: 1050 LGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVA 1109
+GSG+FGTVY GKW G DVA+K +K + EQ + F E +L K H N++
Sbjct: 44 IGSGSFGTVYKGKWHG-DVAVKILK---VVDPTPEQFQ---AFRNEVAVLRKTRHVNILL 96
Query: 1110 FYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKNI 1169
F G + LA VT++ SL L +E + + IA A GM+YLH+KNI
Sbjct: 97 FMGYMTKD---NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNI 153
Query: 1170 VHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR---GTLPWMAPELLNGS 1226
+H D+K +N+ ++ + K+GDFGL+ +K + V G++ WMAPE++
Sbjct: 154 IHRDMKSNNIFLHEGLTV----KIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQ 209
Query: 1227 -SSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP----VPGFCDSE 1281
++ S + DV+S+GIVL+E++TGE PY++++ I +V P + C
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKA 269
Query: 1282 WRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
+ L+ C RP F +I + ++
Sbjct: 270 MKRLVADCVKKVKEERPLFPQILSSIELL 298
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 131/282 (46%), Gaps = 28/282 (9%)
Query: 1049 ELGSGTFGTVYHGKWR----GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
ELG G FG+V G +R DVAIK +K+ T ++ +E + REA+I+ +L +
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMM-----REAQIMHQLDN 69
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYL 1164
P +V GV Q L V E G L L+ K + + + GM+YL
Sbjct: 70 PYIVRLIGVCQ---AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 126
Query: 1165 HSKNIVHFDLKCDN-LLVNLKDPIRPICKVGDFGLSKI--KRNTLVTGGVRGTLP--WMA 1219
KN VH DL N LLVN R K+ DFGLSK ++ T G P W A
Sbjct: 127 EEKNFVHRDLAARNVLLVN-----RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA 181
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFC 1278
PE +N K S + DV+S+G+ +WE L+ G++PY M G + + R P C
Sbjct: 182 PECIN--FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-GPEVMAFIEQGKRMECPPEC 238
Query: 1279 DSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAACQTKSHG 1320
E LM CW RP F + +R+R + +K G
Sbjct: 239 PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEG 280
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 120 bits (301), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+ E L+ ++ LG+G FG V+ G + G T VA+K +K+ + + F EA
Sbjct: 5 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---------FLAEAN 55
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLIIAMD 1156
++ +L H +V Y VV P + +TE+M NGSL L + L K L +A
Sbjct: 56 LMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 112
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRGT 1214
A GM ++ +N +H DL+ N+LV+ D + CK+ DFGL+++ + T G +
Sbjct: 113 IAEGMAFIEERNYIHRDLRAANILVS--DTLS--CKIADFGLARLIEDNEYTAREGAKFP 168
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ W APE +N + + K DV+SFGI+L EI+T G PY M +I + R
Sbjct: 169 IKWTAPEAINYGTFTI--KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMV 225
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P C E LM CW P RP+F
Sbjct: 226 RPDNCPEELYQLMRLCWKERPEDRPTF 252
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 120 bits (301), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+ E L+ ++ LG+G FG V+ G + G T VA+K +K+ + + F EA
Sbjct: 16 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---------FLAEAN 66
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLIIAMD 1156
++ +L H +V Y VV P + +TE+M NGSL L + L K L +A
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 123
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRGT 1214
A GM ++ +N +H DL+ N+LV+ D + CK+ DFGL+++ + T G +
Sbjct: 124 IAEGMAFIEERNYIHRDLRAANILVS--DTLS--CKIADFGLARLIEDNEYTAREGAKFP 179
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ W APE +N + + K DV+SFGI+L EI+T G PY M +I + R
Sbjct: 180 IKWTAPEAINYGTFTI--KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMV 236
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P C E LM CW P RP+F
Sbjct: 237 RPDNCPEELYQLMRLCWKERPEDRPTF 263
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 120 bits (301), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+ E L+ ++ LG+G FG V+ G + G T VA+K +K+ + + F EA
Sbjct: 15 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---------FLAEAN 65
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLIIAMD 1156
++ +L H +V Y VV P + +TE+M NGSL L + L K L +A
Sbjct: 66 LMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 122
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRGT 1214
A GM ++ +N +H DL+ N+LV+ D + CK+ DFGL+++ + T G +
Sbjct: 123 IAEGMAFIEERNYIHRDLRAANILVS--DTLS--CKIADFGLARLIEDNEYTAREGAKFP 178
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ W APE +N + + K DV+SFGI+L EI+T G PY M +I + R
Sbjct: 179 IKWTAPEAINYGTFTI--KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMV 235
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P C E LM CW P RP+F
Sbjct: 236 RPDNCPEELYQLMRLCWKERPEDRPTF 262
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,6-Difluorophenyl)-1h-1,
2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 120 bits (300), Expect = 6e-27, Method: Composition-based stats.
Identities = 96/299 (32%), Positives = 137/299 (45%), Gaps = 34/299 (11%)
Query: 1024 VDLALGNFDISTLQIIKNE--DLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFT 1079
VDL N ++ + E D+ +LG G +G VY G W+ VA+K +K+
Sbjct: 12 VDLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKED--- 68
Query: 1080 GRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLL 1139
+ E E EF +EA ++ ++ HPN+V GV P VTE+M G+L L
Sbjct: 69 --TMEVE----EFLKEAAVMKEIKHPNLVQLLGVCTLEP--PFYIVTEYMPYGNLLDYL- 119
Query: 1140 SKERHLDRRK-----RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVG 1194
R +R + L +A + MEYL KN +H DL N LV + KV
Sbjct: 120 ---RECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH----VVKVA 172
Query: 1195 DFGLSKIKRNTLVT--GGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEE 1251
DFGLS++ T G + + W APE L + + S K DV++FG++LWEI T G
Sbjct: 173 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESL--AYNTFSIKSDVWAFGVLLWEIATYGMS 230
Query: 1252 PYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
PY + + ++ R P C + LM CW P RPSF E + M
Sbjct: 231 PYPGIDLSQVY-DLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+ E L+ ++ LG+G FG V+ G + G T VA+K +K+ + + F EA
Sbjct: 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---------FLAEAN 60
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLIIAMD 1156
++ +L H +V Y VV P + +TE+M NGSL L + L K L +A
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRGT 1214
A GM ++ +N +H DL+ N+LV+ D + CK+ DFGL+++ + T G +
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVS--DTLS--CKIADFGLARLIEDNEXTAREGAKFP 173
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ W APE +N + + K DV+SFGI+L EI+T G PY M +I + R
Sbjct: 174 IKWTAPEAINYGTFTI--KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMV 230
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P C E LM CW P RP+F
Sbjct: 231 RPDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 120 bits (300), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+ E L+ ++ LG+G FG V+ G + G T VA+K +K+ + + F EA
Sbjct: 19 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---------FLAEAN 69
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLIIAMD 1156
++ +L H +V Y VV P + +TE+M NGSL L + L K L +A
Sbjct: 70 LMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 126
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRGT 1214
A GM ++ +N +H DL+ N+LV+ D + CK+ DFGL+++ + T G +
Sbjct: 127 IAEGMAFIEERNYIHRDLRAANILVS--DTLS--CKIADFGLARLIEDNEXTAREGAKFP 182
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ W APE +N + + K DV+SFGI+L EI+T G PY M +I + R
Sbjct: 183 IKWTAPEAINYGTFTI--KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMV 239
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P C E LM CW P RP+F
Sbjct: 240 RPDNCPEELYQLMRLCWKERPEDRPTF 266
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 120 bits (300), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ L++LG G FG+V ++ G VA+K+++ S + E R +F RE E
Sbjct: 13 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----TEEHLR---DFEREIE 64
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L H N+V + GV L + E++ GSLR L + +D K L
Sbjct: 65 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 124
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GMEYL +K +H +L N+LV ++ + K+GDFGL+K+ K V
Sbjct: 125 CKGMEYLGTKRYIHRNLATRNILVENENRV----KIGDFGLTKVLPQDKEYYKVKEPGES 180
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----------------GEEPYANMH 1257
+ W APE L + SK S DV+SFG+VL+E+ T G + M
Sbjct: 181 PIFWYAPESL--TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 238
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+I + NN R P P C E ++M +CW + RPSF ++A R+
Sbjct: 239 VFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 287
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 120 bits (300), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 1048 KELGSGTFGTVYHGKWR-----GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +G+G FG V G+ + VAIK +K G + +Q R +F EA I+ +
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRR---DFLGEASIMGQF 103
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV + VTE+M NGSL L + + + + A GM+
Sbjct: 104 DHPNIIRLEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWM 1218
YL VH DL N+L+N +CKV DFGL+++ + T G + + W
Sbjct: 162 YLSDMGYVHRDLAARNILINSN----LVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWT 217
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
+PE + + K + DV+S+GIVLWE+++ GE PY M +I V+ R P P
Sbjct: 218 SPEAI--AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLPPPMD 274
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C + LM CW D RP F +I L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 119 bits (299), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 124/271 (45%), Gaps = 14/271 (5%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+I +DL L++LG G+FG V G+W + C Q +F RE
Sbjct: 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 73
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
+ L H N++ YGVV P + VTE GSL L + H A+
Sbjct: 74 AMHSLDHRNLIRLYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 130
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRN---TLVTGGVRG 1213
A GM YL SK +H DL NLL+ +D + K+GDFGL + + +N ++ +
Sbjct: 131 AEGMGYLESKRFIHRDLAARNLLLATRD----LVKIGDFGLMRALPQNDDHXVMQEHRKV 186
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
W APE L + S D + FG+ LWE+ T G+EP+ ++ I+ I R
Sbjct: 187 PFAWCAPESLK--TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 244
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
P P C + +M QCWA P RP+F +
Sbjct: 245 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 275
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 119 bits (299), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 131/282 (46%), Gaps = 28/282 (9%)
Query: 1049 ELGSGTFGTVYHGKWR----GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
ELG G FG+V G +R DVAIK +K+ T ++ +E + REA+I+ +L +
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMM-----REAQIMHQLDN 395
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYL 1164
P +V GV Q L V E G L L+ K + + + GM+YL
Sbjct: 396 PYIVRLIGVCQ---AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 452
Query: 1165 HSKNIVHFDLKCDN-LLVNLKDPIRPICKVGDFGLSKI--KRNTLVTGGVRGTLP--WMA 1219
KN VH +L N LLVN R K+ DFGLSK ++ T G P W A
Sbjct: 453 EEKNFVHRNLAARNVLLVN-----RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA 507
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFC 1278
PE +N K S + DV+S+G+ +WE L+ G++PY M G + + R P C
Sbjct: 508 PECIN--FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-GPEVMAFIEQGKRMECPPEC 564
Query: 1279 DSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAACQTKSHG 1320
E LM CW RP F + +R+R + +K G
Sbjct: 565 PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEG 606
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 119 bits (299), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 124/271 (45%), Gaps = 14/271 (5%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+I +DL L++LG G+FG V G+W + C Q +F RE
Sbjct: 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 73
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
+ L H N++ YGVV P + VTE GSL L + H A+
Sbjct: 74 AMHSLDHRNLIRLYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 130
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRN---TLVTGGVRG 1213
A GM YL SK +H DL NLL+ +D + K+GDFGL + + +N ++ +
Sbjct: 131 AEGMGYLESKRFIHRDLAARNLLLATRD----LVKIGDFGLMRALPQNDDHYVMQEHRKV 186
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
W APE L + S D + FG+ LWE+ T G+EP+ ++ I+ I R
Sbjct: 187 PFAWCAPESLK--TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 244
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
P P C + +M QCWA P RP+F +
Sbjct: 245 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 275
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
Length = 341
Score = 119 bits (299), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 124/271 (45%), Gaps = 14/271 (5%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+I +DL L++LG G+FG V G+W + C Q +F RE
Sbjct: 8 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 67
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
+ L H N++ YGVV P + VTE GSL L + H A+
Sbjct: 68 AMHSLDHRNLIRLYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 124
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRN---TLVTGGVRG 1213
A GM YL SK +H DL NLL+ +D + K+GDFGL + + +N ++ +
Sbjct: 125 AEGMGYLESKRFIHRDLAARNLLLATRD----LVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
W APE L + S D + FG+ LWE+ T G+EP+ ++ I+ I R
Sbjct: 181 PFAWCAPESLK--TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 238
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
P P C + +M QCWA P RP+F +
Sbjct: 239 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+ E L+ ++ LG+G FG V+ G + G T VA+K +K+ + + F EA
Sbjct: 12 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---------FLAEAN 62
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLIIAMD 1156
++ +L H +V Y VV P + +TE+M NGSL L + L K L +A
Sbjct: 63 LMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 119
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRGT 1214
A GM ++ +N +H DL+ N+LV+ D + CK+ DFGL+++ + T G +
Sbjct: 120 IAEGMAFIEERNYIHRDLRAANILVS--DTLS--CKIADFGLARLIEDNEXTAREGAKFP 175
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ W APE +N + + K DV+SFGI+L EI+T G PY M +I + R
Sbjct: 176 IKWTAPEAINYGTFTI--KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMV 232
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P C E LM CW P RP+F
Sbjct: 233 RPDNCPEELYQLMRLCWKERPEDRPTF 259
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+ E L+ ++ LG+G FG V+ G + G T VA+K +K+ + + F EA
Sbjct: 11 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---------FLAEAN 61
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLIIAMD 1156
++ +L H +V Y VV P + +TE+M NGSL L + L K L +A
Sbjct: 62 LMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 118
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRGT 1214
A GM ++ +N +H DL+ N+LV+ D + CK+ DFGL+++ + T G +
Sbjct: 119 IAEGMAFIEERNYIHRDLRAANILVS--DTLS--CKIADFGLARLIEDNEXTAREGAKFP 174
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ W APE +N + + K DV+SFGI+L EI+T G PY M +I + R
Sbjct: 175 IKWTAPEAINYGTFTI--KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMV 231
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P C E LM CW P RP+F
Sbjct: 232 RPDNCPEELYQLMRLCWKERPEDRPTF 258
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g
Triple Mutant
Length = 373
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 129/270 (47%), Gaps = 26/270 (9%)
Query: 1048 KELGSGTFGTVYHGKWR-----GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +G+G FG V G+ + VAIK +K G + +Q R +F EA I+ +
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRR---DFLGEASIMGQF 103
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV + VTE+M NGSL L + + + + A GM+
Sbjct: 104 DHPNIIRLEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWM 1218
YL VH DL N+L+N +CKV DFGL ++ + T G + + W
Sbjct: 162 YLSDMGYVHRDLAARNILINSN----LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
+PE + + K + DV+S+GIVLWE+++ GE PY M +I V+ R P P
Sbjct: 218 SPEAI--AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLPPPMD 274
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C + LM CW D RP F +I L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+ E L+ ++ LG+G FG V+ G + G T VA+K +K+ + + F EA
Sbjct: 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---------FLAEAN 60
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLIIAMD 1156
++ +L H +V Y VV P + +TE+M NGSL L + L K L +A
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRGT 1214
A GM ++ +N +H DL+ N+LV+ D + CK+ DFGL+++ + T G +
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVS--DTLS--CKIADFGLARLIEDNEXTAREGAKFP 173
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ W APE +N + + K DV+SFGI+L EI+T G PY M +I + R
Sbjct: 174 IKWTAPEAINYGTFTI--KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMV 230
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P C E LM CW P RP+F
Sbjct: 231 RPDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+ E L+ ++ LG+G FG V+ G + G T VA+K +K+ + + F EA
Sbjct: 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---------FLAEAN 60
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLIIAMD 1156
++ +L H +V Y VV P + +TE+M NGSL L + L K L +A
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRGT 1214
A GM ++ +N +H DL+ N+LV+ D + CK+ DFGL+++ + T G +
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVS--DTLS--CKIADFGLARLIEDNEYTAREGAKFP 173
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ W APE +N + + K DV+SFGI+L EI+T G PY M +I + R
Sbjct: 174 IKWTAPEAINYGTFTI--KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMV 230
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P C E LM CW P RP+F
Sbjct: 231 RPDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 129/270 (47%), Gaps = 26/270 (9%)
Query: 1048 KELGSGTFGTVYHGKWR-----GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +G+G FG V G+ + VAIK +K G + +Q R +F EA I+ +
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRR---DFLGEASIMGQF 103
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV + VTE M NGSL L + + + + A GM+
Sbjct: 104 DHPNIIRLEGVVTKSK--PVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWM 1218
YL VH DL N+L+N +CKV DFGLS++ + T G + + W
Sbjct: 162 YLSDMGYVHRDLAARNILINSN----LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
+PE + + K + DV+S+GIVLWE+++ GE PY M +I V+ R P P
Sbjct: 218 SPEAI--AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLPPPMD 274
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C + LM CW D RP F +I L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 129/270 (47%), Gaps = 26/270 (9%)
Query: 1048 KELGSGTFGTVYHGKWR-----GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +G+G FG V G+ + VAIK +K G + +Q R +F EA I+ +
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRR---DFLGEASIMGQF 74
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV + VTE M NGSL L + + + + A GM+
Sbjct: 75 DHPNIIRLEGVVTKSK--PVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWM 1218
YL VH DL N+L+N +CKV DFGLS++ + T G + + W
Sbjct: 133 YLSDMGYVHRDLAARNILINSN----LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
+PE + + K + DV+S+GIVLWE+++ GE PY M +I V+ R P P
Sbjct: 189 SPEAI--AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLPPPMD 245
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C + LM CW D RP F +I L
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 128/268 (47%), Gaps = 26/268 (9%)
Query: 1050 LGSGTFGTVYHGKW-----RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G+G FG V G+ R VAIK +K G + +Q R +F EA I+ + H
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLK----VGYTEKQRR---DFLGEASIMGQFDH 82
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYL 1164
PN++ GVV + VTE+M NGSL L + + + + + GM+YL
Sbjct: 83 PNIIHLEGVVTKSK--PVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYL 140
Query: 1165 HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWMAP 1220
VH DL N+L+N +CKV DFGLS++ + T G + + W AP
Sbjct: 141 SDMGYVHRDLAARNILINSN----LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAP 196
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
E + + K + DV+S+GIV+WE+++ GE PY M +I V R P P C
Sbjct: 197 EAI--AFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKA-VEEGYRLPSPMDCP 253
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ LM CW + RP F EI L
Sbjct: 254 AALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 129/270 (47%), Gaps = 26/270 (9%)
Query: 1048 KELGSGTFGTVYHGKWR-----GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +G+G FG V G+ + VAIK +K G + +Q R +F EA I+ +
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----VGYTEKQRR---DFLGEASIMGQF 103
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV + VTE M NGSL L + + + + A GM+
Sbjct: 104 DHPNIIRLEGVVTKSK--PVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWM 1218
YL VH DL N+L+N +CKV DFGLS++ + T G + + W
Sbjct: 162 YLSDMGAVHRDLAARNILINSN----LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
+PE + + K + DV+S+GIVLWE+++ GE PY M +I V+ R P P
Sbjct: 218 SPEAI--AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLPPPMD 274
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C + LM CW D RP F +I L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 124/271 (45%), Gaps = 14/271 (5%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+I +DL L++LG G+FG V G+W + C Q +F RE
Sbjct: 8 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 67
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
+ L H N++ YGVV P + VTE GSL L + H A+
Sbjct: 68 AMHSLDHRNLIRLYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 124
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRN---TLVTGGVRG 1213
A GM YL SK +H DL NLL+ +D + K+GDFGL + + +N ++ +
Sbjct: 125 AEGMGYLESKRFIHRDLAARNLLLATRD----LVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
W APE L + S D + FG+ LWE+ T G+EP+ ++ I+ I R
Sbjct: 181 PFAWCAPESLK--TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 238
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
P P C + +M QCWA P RP+F +
Sbjct: 239 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 124/271 (45%), Gaps = 14/271 (5%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+I +DL L++LG G+FG V G+W + C Q +F RE
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
+ L H N++ YGVV P + VTE GSL L + H A+
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 120
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRN---TLVTGGVRG 1213
A GM YL SK +H DL NLL+ +D + K+GDFGL + + +N ++ +
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRD----LVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
W APE L + S D + FG+ LWE+ T G+EP+ ++ I+ I R
Sbjct: 177 PFAWCAPESLK--TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
P P C + +M QCWA P RP+F +
Sbjct: 235 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 152/309 (49%), Gaps = 43/309 (13%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
I + L+ + +LG G FG+V ++ G VA+K+++ S +Q+R +
Sbjct: 6 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-----GPDQQR---D 57
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPG-GTLATVTEFMVNGSLRHVLLSKERHLDRRKR 1150
F RE +IL LH +V + GV GPG +L V E++ +G LR L LD +
Sbjct: 58 FQREIQILKALHSDFIVKYRGVSY-GPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL 116
Query: 1151 LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTL 1206
L+ + GMEYL S+ VH DL N+LV + + K+ DFGL+K+ K +
Sbjct: 117 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV----KIADFGLAKLLPLDKDYYV 172
Query: 1207 VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYA--NMHYGAIIGG 1264
V + + W APE L S + S + DV+SFG+VL+E+ T + + + ++G
Sbjct: 173 VREPGQSPIFWYAPESL--SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGS 230
Query: 1265 ------------IVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM-- 1310
++ R P P C +E LM+ CWAP P RPSF+ + +L ++
Sbjct: 231 ERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 290
Query: 1311 -SAACQTKS 1318
S C+T +
Sbjct: 291 GSRGCETHA 299
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 148/309 (47%), Gaps = 43/309 (13%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
I + L+ + +LG G FG+V ++ G VA+K+++ S +Q+R +
Sbjct: 7 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-----GPDQQR---D 58
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPG-GTLATVTEFMVNGSLRHVLLSKERHLDRRKR 1150
F RE +IL LH +V + GV GPG +L V E++ +G LR L LD +
Sbjct: 59 FQREIQILKALHSDFIVKYRGVSY-GPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL 117
Query: 1151 LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTL 1206
L+ + GMEYL S+ VH DL N+LV + + K+ DFGL+K+ K +
Sbjct: 118 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV----KIADFGLAKLLPLDKDYYV 173
Query: 1207 VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT--------GEEPYANMHY 1258
V + + W APE L S + S + DV+SFG+VL+E+ T E M
Sbjct: 174 VREPGQSPIFWYAPESL--SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGC 231
Query: 1259 GAIIGGIVNNTL------RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM-- 1310
+ + R P P C +E LM+ CWAP P RPSF+ + +L ++
Sbjct: 232 ERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 291
Query: 1311 -SAACQTKS 1318
S C+T +
Sbjct: 292 GSRGCETHA 300
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+ E L+ ++ LG+G FG V+ G + G T VA+K +K+ + + F EA
Sbjct: 6 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---------FLAEAN 56
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLIIAMD 1156
++ +L H +V Y VV P + +TE+M NGSL L + L K L +A
Sbjct: 57 LMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 113
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRGT 1214
A GM ++ +N +H +L+ N+LV+ D + CK+ DFGL+++ + T G +
Sbjct: 114 IAEGMAFIEERNYIHRNLRAANILVS--DTLS--CKIADFGLARLIEDNEYTAREGAKFP 169
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ W APE +N + + K DV+SFGI+L EI+T G PY M +I + R
Sbjct: 170 IKWTAPEAINYGTFTI--KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMV 226
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P C E LM CW P RP+F
Sbjct: 227 RPDNCPEELYQLMRLCWKERPEDRPTF 253
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 118 bits (295), Expect = 2e-26, Method: Composition-based stats.
Identities = 84/258 (32%), Positives = 132/258 (51%), Gaps = 18/258 (6%)
Query: 1050 LGSGTFGTVYHGKWRGTDVAIKRIKKSCFT-GRSSEQERLTLEFWREAEILSKLHHPNVV 1108
+G G FG VYHG++ D A RI+ + + R +E +++ F RE ++ L+HPNV+
Sbjct: 29 IGKGHFGVVYHGEY--IDQAQNRIQCAIKSLSRITEMQQVE-AFLREGLLMRGLNHPNVL 85
Query: 1109 AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKN 1168
A G++ P G + +M +G L + S +R+ + + + A GMEYL +
Sbjct: 86 ALIGIMLP-PEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK 144
Query: 1169 IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IKRNTLVTGGVR-GTLP--WMAPELL 1223
VH DL N +++ + KV DFGL++ + R R LP W A E L
Sbjct: 145 FVHRDLAARNCMLDESFTV----KVADFGLARDILDREYYSVQQHRHARLPVKWTALESL 200
Query: 1224 NGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEW 1282
+ + + K DV+SFG++LWE+LT G PY ++ + + R P P +C
Sbjct: 201 Q--TYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR-RLPQPEYCPDSL 257
Query: 1283 RLLMEQCWAPDPVVRPSF 1300
+M+QCW DP VRP+F
Sbjct: 258 YQVMQQCWEADPAVRPTF 275
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 124/271 (45%), Gaps = 14/271 (5%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+I +DL L++LG G+FG V G+W + C Q +F RE
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
+ L H N++ YGVV P + VTE GSL L + H A+
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 120
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRN---TLVTGGVRG 1213
A GM YL SK +H DL NLL+ +D + K+GDFGL + + +N ++ +
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRD----LVKIGDFGLMRALPQNDDHXVMQEHRKV 176
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
W APE L + S D + FG+ LWE+ T G+EP+ ++ I+ I R
Sbjct: 177 PFAWCAPESLK--TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
P P C + +M QCWA P RP+F +
Sbjct: 235 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 152/309 (49%), Gaps = 43/309 (13%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
I + L+ + +LG G FG+V ++ G VA+K+++ S +Q+R +
Sbjct: 19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-----GPDQQR---D 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPG-GTLATVTEFMVNGSLRHVLLSKERHLDRRKR 1150
F RE +IL LH +V + GV GPG +L V E++ +G LR L LD +
Sbjct: 71 FQREIQILKALHSDFIVKYRGV-SYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL 129
Query: 1151 LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTL 1206
L+ + GMEYL S+ VH DL N+LV + + K+ DFGL+K+ K +
Sbjct: 130 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV----KIADFGLAKLLPLDKDYYV 185
Query: 1207 VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYA--NMHYGAIIGG 1264
V + + W APE L S + S + DV+SFG+VL+E+ T + + + ++G
Sbjct: 186 VREPGQSPIFWYAPESL--SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGC 243
Query: 1265 ------------IVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM-- 1310
++ R P P C +E LM+ CWAP P RPSF+ + +L ++
Sbjct: 244 ERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303
Query: 1311 -SAACQTKS 1318
S C+T +
Sbjct: 304 GSRGCETHA 312
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 133/278 (47%), Gaps = 27/278 (9%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHG-----KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFW 1093
I ED+ + LG G FG VY G K +VA+K KK C T + E+ F
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEK------FM 73
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
EA I+ L HP++V G++++ P + E G L H L + L ++
Sbjct: 74 SEAVIMKNLDHPHIVKLIGIIEEEPTWI---IMELYPYGELGHYLERNKNSLKVLTLVLY 130
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPIC-KVGDFGLSK-IKRNTLVTGGV 1211
++ M YL S N VH D+ N+LV P C K+GDFGLS+ I+ V
Sbjct: 131 SLQICKAMAYLESINCVHRDIAVRNILVA-----SPECVKLGDFGLSRYIEDEDYYKASV 185
Query: 1212 -RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNT 1269
R + WM+PE +N + + DV+ F + +WEIL+ G++P+ + +IG ++
Sbjct: 186 TRLPIKWMSPESIN--FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG-VLEKG 242
Query: 1270 LRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P P C LM +CW DP RP FTE+ L
Sbjct: 243 DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 280
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 133/278 (47%), Gaps = 27/278 (9%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHG-----KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFW 1093
I ED+ + LG G FG VY G K +VA+K KK C T + E+ F
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEK------FM 61
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
EA I+ L HP++V G++++ P + E G L H L + L ++
Sbjct: 62 SEAVIMKNLDHPHIVKLIGIIEEEPTWI---IMELYPYGELGHYLERNKNSLKVLTLVLY 118
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPIC-KVGDFGLSK-IKRNTLVTGGV 1211
++ M YL S N VH D+ N+LV P C K+GDFGLS+ I+ V
Sbjct: 119 SLQICKAMAYLESINCVHRDIAVRNILVA-----SPECVKLGDFGLSRYIEDEDYYKASV 173
Query: 1212 -RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNT 1269
R + WM+PE +N + + DV+ F + +WEIL+ G++P+ + +IG ++
Sbjct: 174 TRLPIKWMSPESIN--FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG-VLEKG 230
Query: 1270 LRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P P C LM +CW DP RP FTE+ L
Sbjct: 231 DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 268
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 128/270 (47%), Gaps = 26/270 (9%)
Query: 1048 KELGSGTFGTVYHGKW-----RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +G G FG V G+ R VAIK +K G + +Q R +F EA I+ +
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLK----AGYTDKQRR---DFLSEASIMGQF 72
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV + +TE+M NGSL L + + + + GM+
Sbjct: 73 DHPNIIHLEGVVTKCK--PVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMK 130
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWM 1218
YL + VH DL N+LVN +CKV DFG+S++ + T G + + W
Sbjct: 131 YLSDMSYVHRDLAARNILVNSN----LVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT 186
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
APE + + K + DV+S+GIV+WE+++ GE PY +M +I I PP P
Sbjct: 187 APEAI--AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPP-PMD 243
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C LM CW + RP F +I L
Sbjct: 244 CPIALHQLMLDCWQKERSDRPKFGQIVNML 273
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 133/278 (47%), Gaps = 27/278 (9%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-----TDVAIKRIKKSCFTGRSSEQERLTLEFW 1093
I ED+ + LG G FG VY G + +VA+K KK C T + E+ F
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEK------FM 57
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
EA I+ L HP++V G++++ P + E G L H L + L ++
Sbjct: 58 SEAVIMKNLDHPHIVKLIGIIEEEPTWI---IMELYPYGELGHYLERNKNSLKVLTLVLY 114
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPIC-KVGDFGLSK-IKRNTLVTGGV 1211
++ M YL S N VH D+ N+LV P C K+GDFGLS+ I+ V
Sbjct: 115 SLQICKAMAYLESINCVHRDIAVRNILVA-----SPECVKLGDFGLSRYIEDEDYYKASV 169
Query: 1212 -RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNT 1269
R + WM+PE +N + + DV+ F + +WEIL+ G++P+ + +IG ++
Sbjct: 170 TRLPIKWMSPESIN--FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG-VLEKG 226
Query: 1270 LRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P P C LM +CW DP RP FTE+ L
Sbjct: 227 DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 264
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 124/271 (45%), Gaps = 14/271 (5%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+I +DL L++LG G+FG V G+W + C Q +F RE
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
+ L H N++ YGVV P + VTE GSL L + H A+
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 120
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRN---TLVTGGVRG 1213
A GM YL SK +H DL NLL+ +D + K+GDFGL + + +N ++ +
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRD----LVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
W APE L + S D + FG+ LWE+ T G+EP+ ++ I+ I R
Sbjct: 177 PFAWCAPESLK--TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
P P C + +M QCWA P RP+F +
Sbjct: 235 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 128/270 (47%), Gaps = 26/270 (9%)
Query: 1048 KELGSGTFGTVYHGKW-----RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +G G FG V G+ R VAIK +K G + +Q R +F EA I+ +
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLK----AGYTDKQRR---DFLSEASIMGQF 87
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV + +TE+M NGSL L + + + + GM+
Sbjct: 88 DHPNIIHLEGVVTKCK--PVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMK 145
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWM 1218
YL + VH DL N+LVN +CKV DFG+S++ + T G + + W
Sbjct: 146 YLSDMSAVHRDLAARNILVNSN----LVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT 201
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
APE + + K + DV+S+GIV+WE+++ GE PY +M +I I PP P
Sbjct: 202 APEAI--AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPP-PMD 258
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C LM CW + RP F +I L
Sbjct: 259 CPIALHQLMLDCWQKERSDRPKFGQIVNML 288
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 138/293 (47%), Gaps = 32/293 (10%)
Query: 1033 ISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQ 1085
IS L+ + +++ ++ LG G FG VY G+ G VA+K + + C SEQ
Sbjct: 22 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-----SEQ 76
Query: 1086 ERLTLEFWREAEILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLL----- 1139
+ L +F EA I+SKL+H N+V GV +Q P L E M G L+ L
Sbjct: 77 DEL--DFLMEALIISKLNHQNIVRCIGVSLQSLPRFIL---LELMAGGDLKSFLRETRPR 131
Query: 1140 -SKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL 1198
S+ L L +A D A G +YL + +H D+ N L+ P R + K+GDFG+
Sbjct: 132 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR-VAKIGDFGM 190
Query: 1199 SK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYA 1254
++ I R + G LP WM PE + K D +SFG++LWEI + G PY
Sbjct: 191 ARDIYRASYYRKGGCAMLPVKWMPPEAF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 248
Query: 1255 NMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ + + P P C +M QCW P RP+F I R+
Sbjct: 249 SKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 146/289 (50%), Gaps = 29/289 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K +L+ +K LGSG FGTVY G W VAIK + ++ TG +
Sbjct: 7 AQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET--TGPKA---- 60
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
+EF EA I++ + HP++V GV T+ VT+ M +G L + + ++
Sbjct: 61 -NVEFMDEALIMASMDHPHLVRLLGVCL---SPTIQLVTQLMPHGCLLEYVHEHKDNIGS 116
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + + K+ DFGL+++ ++
Sbjct: 117 QLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHV----KITDFGLARLLEGDEK 172
Query: 1204 NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAII 1262
GG + + WMA E ++ K + + DV+S+G+ +WE++T G +PY + I
Sbjct: 173 EYNADGG-KMPIKWMALECIH--YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE-I 228
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 1311
++ R P P C + ++M +CW D RP F E+A M+
Sbjct: 229 PDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA 277
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf
12058
Length = 285
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 128/270 (47%), Gaps = 26/270 (9%)
Query: 1048 KELGSGTFGTVYHGKW-----RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K +G G FG V G+ R VAIK +K G + +Q R +F EA I+ +
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLK----AGYTDKQRR---DFLSEASIMGQF 66
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ GVV + +TE+M NGSL L + + + + GM+
Sbjct: 67 DHPNIIHLEGVVTKCK--PVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMK 124
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN----TLVTGGVRGTLPWM 1218
YL + VH DL N+LVN +CKV DFG+S++ + T G + + W
Sbjct: 125 YLSDMSYVHRDLAARNILVNSN----LVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT 180
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
APE + + K + DV+S+GIV+WE+++ GE PY +M +I I PP P
Sbjct: 181 APEAI--AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPP-PMD 237
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C LM CW + RP F +I L
Sbjct: 238 CPIALHQLMLDCWQKERSDRPKFGQIVNML 267
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 138/293 (47%), Gaps = 32/293 (10%)
Query: 1033 ISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQ 1085
IS L+ + +++ ++ LG G FG VY G+ G VA+K + + C SEQ
Sbjct: 36 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-----SEQ 90
Query: 1086 ERLTLEFWREAEILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLL----- 1139
+ L +F EA I+SKL+H N+V GV +Q P L E M G L+ L
Sbjct: 91 DEL--DFLMEALIISKLNHQNIVRCIGVSLQSLPRFIL---LELMAGGDLKSFLRETRPR 145
Query: 1140 -SKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL 1198
S+ L L +A D A G +YL + +H D+ N L+ P R + K+GDFG+
Sbjct: 146 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR-VAKIGDFGM 204
Query: 1199 SK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYA 1254
++ I R + G LP WM PE + K D +SFG++LWEI + G PY
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 262
Query: 1255 NMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ + + P P C +M QCW P RP+F I R+
Sbjct: 263 SKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In
Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 133/267 (49%), Gaps = 24/267 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-TDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
+ E L+ ++ LG+G G V+ G + G T VA+K +K+ + + F EA
Sbjct: 10 VPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA---------FLAEAN 60
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE-RHLDRRKRLIIAMD 1156
++ +L H +V Y VV P + +TE+M NGSL L + L K L +A
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRGT 1214
A GM ++ +N +H DL+ N+LV+ D + CK+ DFGL+++ + T G +
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVS--DTLS--CKIADFGLARLIEDAEXTAREGAKFP 173
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ W APE +N + + K DV+SFGI+L EI+T G PY M +I + R
Sbjct: 174 IKWTAPEAINYGTFTI--KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMV 230
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P C E LM CW P RP+F
Sbjct: 231 RPDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 137/293 (46%), Gaps = 32/293 (10%)
Query: 1033 ISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQ 1085
IS L+ + +++ ++ LG G FG VY G+ G VA+K + + C SEQ
Sbjct: 48 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-----SEQ 102
Query: 1086 ERLTLEFWREAEILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLL----- 1139
+ L +F EA I+SK +H N+V GV +Q P L E M G L+ L
Sbjct: 103 DEL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL---LELMAGGDLKSFLRETRPR 157
Query: 1140 -SKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL 1198
S+ L L +A D A G +YL + +H D+ N L+ P R + K+GDFG+
Sbjct: 158 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR-VAKIGDFGM 216
Query: 1199 SK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYA 1254
++ I R + G LP WM PE + K D +SFG++LWEI + G PY
Sbjct: 217 ARDIYRASYYRKGGCAMLPVKWMPPEAF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 274
Query: 1255 NMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ + + P P C +M QCW P RP+F I R+
Sbjct: 275 SKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 326
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 154/318 (48%), Gaps = 49/318 (15%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + +ELG G+FG VY G +G T VAIK + ++ +S +ER +E
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-----ASMRER--IE 74
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR--- 1148
F EA ++ + + +VV GVV G TL + E M G L+ L S ++
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQG-QPTL-VIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 1149 ------KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
K + +A + A GM YL++ VH DL N +V + K+GDFG+++ I
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV----KIGDFGMTRDI 188
Query: 1202 KRNTLVTGGVRGTLP--WMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
G +G LP WM+PE L +G + S DV+SFG+VLWEI T E+PY +
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLS 245
Query: 1258 YGAII-----GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR-VMS 1311
++ GG+++ P C LM CW +P +RPSF EI ++ M
Sbjct: 246 NEQVLRFVMEGGLLDK------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299
Query: 1312 AACQTKSHGHQVQNQVPK 1329
+ S + +N++P+
Sbjct: 300 PGFREVSFYYSEENKLPE 317
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 116 bits (290), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 137/293 (46%), Gaps = 32/293 (10%)
Query: 1033 ISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQ 1085
IS L+ + +++ ++ LG G FG VY G+ G VA+K + + C SEQ
Sbjct: 36 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-----SEQ 90
Query: 1086 ERLTLEFWREAEILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLL----- 1139
+ L +F EA I+SK +H N+V GV +Q P L E M G L+ L
Sbjct: 91 DEL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL---MELMAGGDLKSFLRETRPR 145
Query: 1140 -SKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL 1198
S+ L L +A D A G +YL + +H D+ N L+ P R + K+GDFG+
Sbjct: 146 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR-VAKIGDFGM 204
Query: 1199 SK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYA 1254
++ I R + G LP WM PE + K D +SFG++LWEI + G PY
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 262
Query: 1255 NMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ + + P P C +M QCW P RP+F I R+
Sbjct: 263 SKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 116 bits (290), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 146/289 (50%), Gaps = 29/289 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K +L+ +K LGSG FGTVY G W VAIK + ++ TG +
Sbjct: 30 AQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET--TGPKA---- 83
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
+EF EA I++ + HP++V GV T+ VT+ M +G L + + ++
Sbjct: 84 -NVEFMDEALIMASMDHPHLVRLLGVCLS---PTIQLVTQLMPHGCLLEYVHEHKDNIGS 139
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + + K+ DFGL+++ ++
Sbjct: 140 QLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHV----KITDFGLARLLEGDEK 195
Query: 1204 NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAII 1262
GG + + WMA E ++ K + + DV+S+G+ +WE++T G +PY + I
Sbjct: 196 EYNADGG-KMPIKWMALECIH--YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE-I 251
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 1311
++ R P P C + ++M +CW D RP F E+A M+
Sbjct: 252 PDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA 300
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase
In Complex With Ch5424802
Length = 344
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 137/293 (46%), Gaps = 32/293 (10%)
Query: 1033 ISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQ 1085
IS L+ + +++ ++ LG G FG VY G+ G VA+K + + C SEQ
Sbjct: 38 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-----SEQ 92
Query: 1086 ERLTLEFWREAEILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLL----- 1139
+ L +F EA I+SK +H N+V GV +Q P L E M G L+ L
Sbjct: 93 DEL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL---LELMAGGDLKSFLRETRPR 147
Query: 1140 -SKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL 1198
S+ L L +A D A G +YL + +H D+ N L+ P R + K+GDFG+
Sbjct: 148 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR-VAKIGDFGM 206
Query: 1199 SK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYA 1254
++ I R + G LP WM PE + K D +SFG++LWEI + G PY
Sbjct: 207 ARDIYRASYYRKGGCAMLPVKWMPPEAF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 264
Query: 1255 NMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ + + P P C +M QCW P RP+F I R+
Sbjct: 265 SKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 316
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 137/293 (46%), Gaps = 32/293 (10%)
Query: 1033 ISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQ 1085
IS L+ + +++ ++ LG G FG VY G+ G VA+K + + C SEQ
Sbjct: 28 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-----SEQ 82
Query: 1086 ERLTLEFWREAEILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLL----- 1139
+ L +F EA I+SK +H N+V GV +Q P L E M G L+ L
Sbjct: 83 DEL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL---LELMAGGDLKSFLRETRPR 137
Query: 1140 -SKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL 1198
S+ L L +A D A G +YL + +H D+ N L+ P R + K+GDFG+
Sbjct: 138 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR-VAKIGDFGM 196
Query: 1199 SK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYA 1254
++ I R + G LP WM PE + K D +SFG++LWEI + G PY
Sbjct: 197 ARDIYRASYYRKGGCAMLPVKWMPPEAF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 254
Query: 1255 NMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ + + P P C +M QCW P RP+F I R+
Sbjct: 255 SKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 306
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 137/293 (46%), Gaps = 32/293 (10%)
Query: 1033 ISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQ 1085
IS L+ + +++ ++ LG G FG VY G+ G VA+K + + C SEQ
Sbjct: 22 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-----SEQ 76
Query: 1086 ERLTLEFWREAEILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLL----- 1139
+ L +F EA I+SK +H N+V GV +Q P L E M G L+ L
Sbjct: 77 DEL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL---LELMAGGDLKSFLRETRPR 131
Query: 1140 -SKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL 1198
S+ L L +A D A G +YL + +H D+ N L+ P R + K+GDFG+
Sbjct: 132 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR-VAKIGDFGM 190
Query: 1199 SK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYA 1254
++ I R + G LP WM PE + K D +SFG++LWEI + G PY
Sbjct: 191 ARDIYRASYYRKGGCAMLPVKWMPPEAF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 248
Query: 1255 NMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ + + P P C +M QCW P RP+F I R+
Sbjct: 249 SKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 137/293 (46%), Gaps = 32/293 (10%)
Query: 1033 ISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQ 1085
IS L+ + +++ ++ LG G FG VY G+ G VA+K + + C SEQ
Sbjct: 22 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-----SEQ 76
Query: 1086 ERLTLEFWREAEILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLL----- 1139
+ L +F EA I+SK +H N+V GV +Q P L E M G L+ L
Sbjct: 77 DEL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL---LELMAGGDLKSFLRETRPR 131
Query: 1140 -SKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL 1198
S+ L L +A D A G +YL + +H D+ N L+ P R + K+GDFG+
Sbjct: 132 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR-VAKIGDFGM 190
Query: 1199 SK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYA 1254
++ I R + G LP WM PE + K D +SFG++LWEI + G PY
Sbjct: 191 AQDIYRASYYRKGGCAMLPVKWMPPEAF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 248
Query: 1255 NMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ + + P P C +M QCW P RP+F I R+
Sbjct: 249 SKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 137/293 (46%), Gaps = 32/293 (10%)
Query: 1033 ISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQ 1085
IS L+ + +++ ++ LG G FG VY G+ G VA+K + + C SEQ
Sbjct: 21 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-----SEQ 75
Query: 1086 ERLTLEFWREAEILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLL----- 1139
+ L +F EA I+SK +H N+V GV +Q P L E M G L+ L
Sbjct: 76 DEL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL---MELMAGGDLKSFLRETRPR 130
Query: 1140 -SKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL 1198
S+ L L +A D A G +YL + +H D+ N L+ P R + K+GDFG+
Sbjct: 131 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR-VAKIGDFGM 189
Query: 1199 SK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYA 1254
++ I R + G LP WM PE + K D +SFG++LWEI + G PY
Sbjct: 190 ARDIYRASYYRKGGCAMLPVKWMPPEAF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 247
Query: 1255 NMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ + + P P C +M QCW P RP+F I R+
Sbjct: 248 SKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex
With Crizotinib (Pf-02341066)
Length = 327
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 137/293 (46%), Gaps = 32/293 (10%)
Query: 1033 ISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQ 1085
IS L+ + +++ ++ LG G FG VY G+ G VA+K + + C SEQ
Sbjct: 21 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-----SEQ 75
Query: 1086 ERLTLEFWREAEILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLL----- 1139
+ L +F EA I+SK +H N+V GV +Q P L E M G L+ L
Sbjct: 76 DEL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL---LELMAGGDLKSFLRETRPR 130
Query: 1140 -SKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL 1198
S+ L L +A D A G +YL + +H D+ N L+ P R + K+GDFG+
Sbjct: 131 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR-VAKIGDFGM 189
Query: 1199 SK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYA 1254
++ I R + G LP WM PE + K D +SFG++LWEI + G PY
Sbjct: 190 ARDIYRASYYRKGGCAMLPVKWMPPEAF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 247
Query: 1255 NMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ + + P P C +M QCW P RP+F I R+
Sbjct: 248 SKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 136/293 (46%), Gaps = 32/293 (10%)
Query: 1033 ISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQ 1085
IS L+ + +++ ++ LG G FG VY G+ G VA+K + + C SEQ
Sbjct: 62 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-----SEQ 116
Query: 1086 ERLTLEFWREAEILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLL----- 1139
+ L +F EA I+SK +H N+V GV +Q P L E M G L+ L
Sbjct: 117 DEL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL---LELMAGGDLKSFLRETRPR 171
Query: 1140 -SKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL 1198
S+ L L +A D A G +YL + +H D+ N L+ P R + K+GDFG+
Sbjct: 172 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR-VAKIGDFGM 230
Query: 1199 SK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYA 1254
++ I R G LP WM PE + K D +SFG++LWEI + G PY
Sbjct: 231 ARDIYRAGYYRKGGCAMLPVKWMPPEAF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 288
Query: 1255 NMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ + + P P C +M QCW P RP+F I R+
Sbjct: 289 SKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 340
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 136/293 (46%), Gaps = 32/293 (10%)
Query: 1033 ISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQ 1085
IS L+ + +++ ++ LG G FG VY G+ G VA+K + + C SEQ
Sbjct: 39 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-----SEQ 93
Query: 1086 ERLTLEFWREAEILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLL----- 1139
+ L +F EA I+SK +H N+V GV +Q P L E M G L+ L
Sbjct: 94 DEL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL---LELMAGGDLKSFLRETRPR 148
Query: 1140 -SKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL 1198
S+ L L +A D A G +YL + +H D+ N L+ P R + K+GDFG+
Sbjct: 149 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR-VAKIGDFGM 207
Query: 1199 SK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYA 1254
++ I R G LP WM PE + K D +SFG++LWEI + G PY
Sbjct: 208 ARDIYRAGYYRKGGCAMLPVKWMPPEAF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 265
Query: 1255 NMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ + + P P C +M QCW P RP+F I R+
Sbjct: 266 SKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 317
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With
A Staurosporine Analogue
Length = 290
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 142/298 (47%), Gaps = 40/298 (13%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
I + L+ + +LG G FG+V ++ G VA+K+++ S +Q+R +
Sbjct: 3 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-----GPDQQR---D 54
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGT-LATVTEFMVNGSLRHVLLSKERHLDRRKR 1150
F RE +IL LH +V + GV GPG L V E++ +G LR L LD +
Sbjct: 55 FQREIQILKALHSDFIVKYRGV-SYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRL 113
Query: 1151 LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTL 1206
L+ + GMEYL S+ VH DL N+LV + + K+ DFGL+K+ K +
Sbjct: 114 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV----KIADFGLAKLLPLDKDXXV 169
Query: 1207 VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT--------GEEPYANMHY 1258
V + + W APE L S + S + DV+SFG+VL+E+ T E M
Sbjct: 170 VREPGQSPIFWYAPESL--SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGC 227
Query: 1259 GAIIGGIVNNTL------RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
+ + R P P C +E LM+ CWAP P RPSF+ + +L ++
Sbjct: 228 ERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 285
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 137/293 (46%), Gaps = 32/293 (10%)
Query: 1033 ISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQ 1085
IS L+ + +++ ++ LG G FG VY G+ G VA+K + + C SEQ
Sbjct: 13 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-----SEQ 67
Query: 1086 ERLTLEFWREAEILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLL----- 1139
+ L +F EA I+SK +H N+V GV +Q P L E M G L+ L
Sbjct: 68 DEL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL---LELMAGGDLKSFLRETRPR 122
Query: 1140 -SKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL 1198
S+ L L +A D A G +YL + +H D+ N L+ P R + K+GDFG+
Sbjct: 123 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR-VAKIGDFGM 181
Query: 1199 SK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYA 1254
++ I R + G LP WM PE + K D +SFG++LWEI + G PY
Sbjct: 182 ARDIYRASYYRKGGCAMLPVKWMPPEAF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 239
Query: 1255 NMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ + + P P C +M QCW P RP+F I R+
Sbjct: 240 SKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 291
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 153/318 (48%), Gaps = 49/318 (15%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + +ELG G+FG VY G +G T VAIK + ++ +S +ER +E
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-----ASMRER--IE 74
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHL------ 1145
F EA ++ + + +VV GVV G TL + E M G L+ L S +
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQG-QPTL-VIMELMTRGDLKSYLRSLRPAMANNPVL 132
Query: 1146 ---DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
K + +A + A GM YL++ VH DL N +V + K+GDFG+++ I
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV----KIGDFGMTRDI 188
Query: 1202 KRNTLVTGGVRGTLP--WMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
G +G LP WM+PE L +G + S DV+SFG+VLWEI T E+PY +
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLS 245
Query: 1258 YGAII-----GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR-VMS 1311
++ GG+++ P C LM CW +P +RPSF EI ++ M
Sbjct: 246 NEQVLRFVMEGGLLDK------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299
Query: 1312 AACQTKSHGHQVQNQVPK 1329
+ S + +N++P+
Sbjct: 300 PGFREVSFYYSEENKLPE 317
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 138/295 (46%), Gaps = 46/295 (15%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + L+ELG G+FG VY G R T VA+K + +S +S +ER +E
Sbjct: 13 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES-----ASLRER--IE 65
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR---- 1147
F EA ++ +VV GVV G V E M +G L+ L S +
Sbjct: 66 FLNEASVMKGFTCHHVVRLLGVVSKGQ--PTLVVMELMAHGDLKSYLRSLRPEAENNPGR 123
Query: 1148 -----RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
++ + +A + A GM YL++K VH DL N +V + K+GDFG+++ I
Sbjct: 124 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV----KIGDFGMTRDI 179
Query: 1202 KRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHY 1258
G +G LP WMAPE L S D++SFG+VLWEI + E+PY +
Sbjct: 180 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSS--DMWSFGVVLWEITSLAEQPYQGLSN 237
Query: 1259 GAII-----GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ GG ++ P C LM CW +P +RP+F EI L+
Sbjct: 238 EQVLKFVMDGGYLDQ------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 140/291 (48%), Gaps = 38/291 (13%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + +ELG G+FG VY G +G T VAIK + ++ +S +ER +E
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-----ASMRER--IE 68
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR--- 1148
F EA ++ + + +VV GVV G + E M G L+ L S ++
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQ--PTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 1149 ------KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
K + +A + A GM YL++ VH DL N +V + K+GDFG+++ I
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV----KIGDFGMTRDI 182
Query: 1202 KRNTLVTGGVRGTLP--WMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
G +G LP WM+PE L +G + S DV+SFG+VLWEI T E+PY +
Sbjct: 183 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLS 239
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ ++ L P C LM CW +P +RPSF EI ++
Sbjct: 240 NEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 142/291 (48%), Gaps = 38/291 (13%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + +ELG G+FG VY G +G T VAIK + ++ +S +ER +E
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-----ASMRER--IE 67
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR--- 1148
F EA ++ + + +VV GVV G TL + E M G L+ L S ++
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQG-QPTL-VIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 1149 ------KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
K + +A + A GM YL++ VH DL N +V + K+GDFG+++ I
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV----KIGDFGMTRDI 181
Query: 1202 KRNTLVTGGVRGTLP--WMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
G +G LP WM+PE L +G + S DV+SFG+VLWEI T E+PY +
Sbjct: 182 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLS 238
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ ++ L P C LM CW +P +RPSF EI ++
Sbjct: 239 NEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
Length = 308
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 140/291 (48%), Gaps = 38/291 (13%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + +ELG G+FG VY G +G T VAIK + ++ +S +ER +E
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-----ASMRER--IE 68
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR--- 1148
F EA ++ + + +VV GVV G + E M G L+ L S ++
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQ--PTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 1149 ------KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
K + +A + A GM YL++ VH DL N +V + K+GDFG+++ I
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV----KIGDFGMTRDI 182
Query: 1202 KRNTLVTGGVRGTLP--WMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
G +G LP WM+PE L +G + S DV+SFG+VLWEI T E+PY +
Sbjct: 183 XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLS 239
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ ++ L P C LM CW +P +RPSF EI ++
Sbjct: 240 NEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 140/291 (48%), Gaps = 38/291 (13%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + +ELG G+FG VY G +G T VAIK + ++ +S +ER +E
Sbjct: 7 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-----ASMRER--IE 59
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR--- 1148
F EA ++ + + +VV GVV G + E M G L+ L S ++
Sbjct: 60 FLNEASVMKEFNCHHVVRLLGVVSQGQ--PTLVIMELMTRGDLKSYLRSLRPEMENNPVL 117
Query: 1149 ------KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
K + +A + A GM YL++ VH DL N +V + K+GDFG+++ I
Sbjct: 118 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV----KIGDFGMTRDI 173
Query: 1202 KRNTLVTGGVRGTLP--WMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
G +G LP WM+PE L +G + S DV+SFG+VLWEI T E+PY +
Sbjct: 174 XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLS 230
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ ++ L P C LM CW +P +RPSF EI ++
Sbjct: 231 NEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 280
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 139/295 (47%), Gaps = 46/295 (15%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + L+ELG G+FG VY G R T VA+K + +S +S +ER +E
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES-----ASLRER--IE 66
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR---- 1147
F EA ++ +VV GVV G + V E M +G L+ L S +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLV--VMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 1148 -----RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
++ + +A + A GM YL++K VH DL N +V + K+GDFG+++ I
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV----KIGDFGMTRDI 180
Query: 1202 KRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHY 1258
G +G LP WMAPE L S D++SFG+VLWEI + E+PY +
Sbjct: 181 YETAYYRKGGKGLLPVRWMAPESLKDGVFTTSS--DMWSFGVVLWEITSLAEQPYQGLSN 238
Query: 1259 GAII-----GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ GG ++ P C LM CW +P +RP+F EI L+
Sbjct: 239 EQVLKFVMDGGYLDQ------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (34)
Length = 307
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 142/291 (48%), Gaps = 38/291 (13%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + +ELG G+FG VY G +G T VAIK + ++ +S +ER +E
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-----ASMRER--IE 67
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR--- 1148
F EA ++ + + +VV GVV G TL + E M G L+ L S ++
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQ-PTL-VIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 1149 ------KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
K + +A + A GM YL++ VH DL N +V + K+GDFG+++ I
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV----KIGDFGMTRDI 181
Query: 1202 KRNTLVTGGVRGTLP--WMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
G +G LP WM+PE L +G + S DV+SFG+VLWEI T E+PY +
Sbjct: 182 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLS 238
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ ++ L P C LM CW +P +RPSF EI ++
Sbjct: 239 NEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
Length = 301
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 140/291 (48%), Gaps = 38/291 (13%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + +ELG G+FG VY G +G T VAIK + ++ +S +ER +E
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-----ASMRER--IE 61
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR--- 1148
F EA ++ + + +VV GVV G + E M G L+ L S ++
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQ--PTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 1149 ------KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
K + +A + A GM YL++ VH DL N +V + K+GDFG+++ I
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV----KIGDFGMTRDI 175
Query: 1202 KRNTLVTGGVRGTLP--WMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
G +G LP WM+PE L +G + S DV+SFG+VLWEI T E+PY +
Sbjct: 176 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLS 232
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ ++ L P C LM CW +P +RPSF EI ++
Sbjct: 233 NEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With
An Hydantoin Inhibitor
Length = 305
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 142/291 (48%), Gaps = 38/291 (13%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + +ELG G+FG VY G +G T VAIK + ++ +S +ER +E
Sbjct: 13 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-----ASMRER--IE 65
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR--- 1148
F EA ++ + + +VV GVV G TL + E M G L+ L S ++
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQ-PTL-VIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 1149 ------KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
K + +A + A GM YL++ VH DL N +V + K+GDFG+++ I
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV----KIGDFGMTRDI 179
Query: 1202 KRNTLVTGGVRGTLP--WMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
G +G LP WM+PE L +G + S DV+SFG+VLWEI T E+PY +
Sbjct: 180 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLS 236
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ ++ L P C LM CW +P +RPSF EI ++
Sbjct: 237 NEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 286
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 114 bits (285), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 132/268 (49%), Gaps = 25/268 (9%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR-GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E ++ +K LG+G FG V+ G + T VA+K +K + ++ F EA
Sbjct: 10 IPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA---------FLEEAN 60
Query: 1098 ILSKLHHPNVVAFYGVV-QDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAM 1155
++ L H +V Y VV ++ P + +TE+M GSL L S E +LI +
Sbjct: 61 LMKTLQHDKLVRLYAVVTREEP---IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA 117
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRG 1213
A GM Y+ KN +H DL+ N+LV+ +CK+ DFGL+++ + T G +
Sbjct: 118 QIAEGMAYIERKNYIHRDLRAANVLVSES----LMCKIADFGLARVIEDNEYTAREGAKF 173
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE +N + K DV+SFGI+L+EI+T G+ PY ++ + P
Sbjct: 174 PIKWTAPEAINFGCFTI--KSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMP 231
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
V C E +M+ CW RP+F
Sbjct: 232 RVEN-CPDELYDIMKMCWKEKAEERPTF 258
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 114 bits (285), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 138/295 (46%), Gaps = 46/295 (15%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + L+ELG G+FG VY G R T VA+K + +S +S +ER +E
Sbjct: 11 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES-----ASLRER--IE 63
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR---- 1147
F EA ++ +VV GVV G V E M +G L+ L S +
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSK--GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 121
Query: 1148 -----RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
++ + +A + A GM YL++K VH DL N +V + K+GDFG+++ I
Sbjct: 122 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV----KIGDFGMTRDI 177
Query: 1202 KRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHY 1258
G +G LP WMAPE L S D++SFG+VLWEI + E+PY +
Sbjct: 178 XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSS--DMWSFGVVLWEITSLAEQPYQGLSN 235
Query: 1259 GAII-----GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ GG ++ P C LM CW +P +RP+F EI L+
Sbjct: 236 EQVLKFVMDGGYLDQ------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 134/268 (50%), Gaps = 25/268 (9%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWR-GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
I E ++ +K+LG+G FG V+ G + T VA+K +K + ++ F EA
Sbjct: 9 IPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA---------FLEEAN 59
Query: 1098 ILSKLHHPNVVAFYGVV-QDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAM 1155
++ L H +V Y VV ++ P + +TEFM GSL L S E +LI +
Sbjct: 60 LMKTLQHDKLVRLYAVVTKEEP---IYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSA 116
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG--GVRG 1213
A GM Y+ KN +H DL+ N+LV+ +CK+ DFGL+++ + T G +
Sbjct: 117 QIAEGMAYIERKNYIHRDLRAANVLVSES----LMCKIADFGLARVIEDNEYTAREGAKF 172
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRP 1272
+ W APE +N + K +V+SFGI+L+EI+T G+ PY ++ + + R
Sbjct: 173 PIKWTAPEAINFGCFTI--KSNVWSFGILLYEIVTYGKIPYPGRTNADVMSAL-SQGYRM 229
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSF 1300
P C E +M+ CW RP+F
Sbjct: 230 PRMENCPDELYDIMKMCWKEKAEERPTF 257
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Phosphopeptide
Length = 306
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 138/295 (46%), Gaps = 46/295 (15%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + L+ELG G+FG VY G R T VA+K + +S +S +ER +E
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES-----ASLRER--IE 66
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR---- 1147
F EA ++ +VV GVV G V E M +G L+ L S +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSK--GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 1148 -----RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
++ + +A + A GM YL++K VH DL N +V + K+GDFG+++ I
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV----KIGDFGMTRDI 180
Query: 1202 KRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHY 1258
G +G LP WMAPE L S D++SFG+VLWEI + E+PY +
Sbjct: 181 XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSS--DMWSFGVVLWEITSLAEQPYQGLSN 238
Query: 1259 GAII-----GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ GG ++ P C LM CW +P +RP+F EI L+
Sbjct: 239 EQVLKFVMDGGYLDQ------PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 142/291 (48%), Gaps = 38/291 (13%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + +ELG G+FG VY G +G T VAIK + ++ +S +ER +E
Sbjct: 44 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-----ASMRER--IE 96
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR--- 1148
F EA ++ + + +VV GVV G TL + E M G L+ L S ++
Sbjct: 97 FLNEASVMKEFNCHHVVRLLGVVSQGQ-PTL-VIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 1149 ------KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
K + +A + A GM YL++ VH DL N +V + K+GDFG+++ I
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV----KIGDFGMTRDI 210
Query: 1202 KRNTLVTGGVRGTLP--WMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
G +G LP WM+PE L +G + S DV+SFG+VLWEI T E+PY +
Sbjct: 211 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLS 267
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ ++ L P C LM CW +P +RPSF EI ++
Sbjct: 268 NEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 317
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With A Bisubstrate Inhibitor
Length = 306
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 138/295 (46%), Gaps = 46/295 (15%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + L+ELG G+FG VY G R T VA+K + +S +S +ER +E
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES-----ASLRER--IE 66
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR---- 1147
F EA ++ +VV GVV G V E M +G L+ L S +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSK--GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 1148 -----RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
++ + +A + A GM YL++K VH DL N +V + K+GDFG+++ I
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV----KIGDFGMTRDI 180
Query: 1202 KRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHY 1258
G +G LP WMAPE L S D++SFG+VLWEI + E+PY +
Sbjct: 181 XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSS--DMWSFGVVLWEITSLAEQPYQGLSN 238
Query: 1259 GAII-----GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ GG ++ P C LM CW +P +RP+F EI L+
Sbjct: 239 EQVLKFVMDGGYLDQ------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human
Insulin Receptor
Length = 306
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 138/295 (46%), Gaps = 46/295 (15%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + L+ELG G+FG VY G R T VA+K + +S +S +ER +E
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES-----ASLRER--IE 66
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR---- 1147
F EA ++ +VV GVV G V E M +G L+ L S +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSK--GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 1148 -----RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
++ + +A + A GM YL++K VH DL N +V + K+GDFG+++ I
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV----KIGDFGMTRDI 180
Query: 1202 KRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHY 1258
G +G LP WMAPE L S D++SFG+VLWEI + E+PY +
Sbjct: 181 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSS--DMWSFGVVLWEITSLAEQPYQGLSN 238
Query: 1259 GAII-----GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ GG ++ P C LM CW +P +RP+F EI L+
Sbjct: 239 EQVLKFVMDGGYLDQ------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine
Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 113 bits (283), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 133/282 (47%), Gaps = 39/282 (13%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
+ LG G FG+V + + D VA+K +K E EF REA + +
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIE------EFLREAACMKEF 82
Query: 1103 HHPNVVAFYGV-VQDGPGGTL---ATVTEFMVNGSLRHVLLSKE-----RHLDRRKRLII 1153
HP+V GV ++ G L + FM +G L LL+ +L + +
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLVTGGVR 1212
+D A GMEYL S+N +H DL N ++ +D +C V DFGLS KI G
Sbjct: 143 MVDIACGMEYLSSRNFIHRDLAARNCMLA-ED--MTVC-VADFGLSRKIYSGDYYRQGCA 198
Query: 1213 GTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH----YGAIIGGI 1265
LP W+A E L + V DV++FG+ +WEI+T G+ PYA + Y +IGG
Sbjct: 199 SKLPVKWLALESLADNLYTVHS--DVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG- 255
Query: 1266 VNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
N +PP C E LM QCW+ DP RPSFT + L
Sbjct: 256 -NRLKQPPE---CMEEVYDLMYQCWSADPKQRPSFTCLRMEL 293
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 113 bits (282), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 134/287 (46%), Gaps = 36/287 (12%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQERLTLEFWRE 1095
+L+ K LG+G FG V G VA+K +K T + E+E L E
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS---TAHADEKEALM----SE 99
Query: 1096 AEILSKL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL-------LSKE--RHL 1145
+I+S L H N+V G G G + +TE+ G L + L L KE R L
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHG--GPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 157
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI---K 1202
+ R L + A GM +L SKN +H D+ N+L+ + K+GDFGL++
Sbjct: 158 ELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH----VAKIGDFGLARDIMND 213
Query: 1203 RNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAI 1261
N +V G R + WMAPE + V DV+S+GI+LWEI + G PY + +
Sbjct: 214 SNYIVKGNARLPVKWMAPESIFDCVYTVQS--DVWSYGILLWEIFSLGLNPYPGILVNSK 271
Query: 1262 IGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
+V + + P F +M+ CWA +P RP+F +I L+
Sbjct: 272 FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 318
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 113 bits (282), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 141/291 (48%), Gaps = 38/291 (13%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + +ELG G+FG VY G +G T VAIK + ++ +S +ER +E
Sbjct: 12 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-----ASMRER--IE 64
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHL------ 1145
F EA ++ + + +VV GVV G TL + E M G L+ L S +
Sbjct: 65 FLNEASVMKEFNCHHVVRLLGVVSQGQ-PTL-VIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 1146 ---DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
K + +A + A GM YL++ VH DL N +V + K+GDFG+++ I
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV----KIGDFGMTRDI 178
Query: 1202 KRNTLVTGGVRGTLP--WMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
G +G LP WM+PE L +G + S DV+SFG+VLWEI T E+PY +
Sbjct: 179 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLS 235
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ ++ L P C LM CW +P +RPSF EI ++
Sbjct: 236 NEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 285
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 113 bits (282), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 134/287 (46%), Gaps = 36/287 (12%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQERLTLEFWRE 1095
+L+ K LG+G FG V G VA+K +K T + E+E L E
Sbjct: 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS---TAHADEKEALM----SE 91
Query: 1096 AEILSKL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL-------LSKE--RHL 1145
+I+S L H N+V G G G + +TE+ G L + L L KE R L
Sbjct: 92 LKIMSHLGQHENIVNLLGACTHG--GPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 149
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI---K 1202
+ R L + A GM +L SKN +H D+ N+L+ + K+GDFGL++
Sbjct: 150 ELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH----VAKIGDFGLARDIMND 205
Query: 1203 RNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAI 1261
N +V G R + WMAPE + V DV+S+GI+LWEI + G PY + +
Sbjct: 206 SNYIVKGNARLPVKWMAPESIFDCVYTVQS--DVWSYGILLWEIFSLGLNPYPGILVNSK 263
Query: 1262 IGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
+V + + P F +M+ CWA +P RP+F +I L+
Sbjct: 264 FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 310
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 139/291 (47%), Gaps = 38/291 (13%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + +ELG G+FG VY G +G T VAIK + ++ +S +ER +E
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-----ASMRER--IE 61
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR--- 1148
F EA ++ + + +VV GVV G + E M G L+ L S ++
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQ--PTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 1149 ------KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
K + +A + A GM YL++ VH DL N V + K+GDFG+++ I
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTV----KIGDFGMTRDI 175
Query: 1202 KRNTLVTGGVRGTLP--WMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
G +G LP WM+PE L +G + S DV+SFG+VLWEI T E+PY +
Sbjct: 176 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLS 232
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ ++ L P C LM CW +P +RPSF EI ++
Sbjct: 233 NEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 141/308 (45%), Gaps = 51/308 (16%)
Query: 1036 LQIIKNEDLEELKELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERL 1088
+Q IK D+ +ELG G FG V+ + VA+K +K R
Sbjct: 9 VQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARK------ 62
Query: 1089 TLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK------- 1141
+F REAE+L+ L H ++V FYGV G G L V E+M +G L L +
Sbjct: 63 --DFQREAELLTNLQHEHIVKFYGVC--GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMIL 118
Query: 1142 --------ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPIC 1191
+ L + L IA A GM YL S++ VH DL N LV NL +
Sbjct: 119 VDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL------LV 172
Query: 1192 KVGDFGLSKIKRNT---LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
K+GDFG+S+ +T V G + WM PE + K + + DV+SFG++LWEI T
Sbjct: 173 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI--MYRKFTTESDVWSFGVILWEIFT 230
Query: 1249 -GEEPYANMHYGAIIGGIVNNTL--RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
G++P+ + +I I + RP V C E +M CW +P R + EI +
Sbjct: 231 YGKQPWFQLSNTEVIECITQGRVLERPRV---CPKEVYDVMLGCWQREPQQRLNIKEIYK 287
Query: 1306 RLRVMSAA 1313
L + A
Sbjct: 288 ILHALGKA 295
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase In
Complex With An Mk-2461 Analog
Length = 307
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 129/270 (47%), Gaps = 28/270 (10%)
Query: 1050 LGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G G FG VYHG D A+K + + G S+ F E I+ H
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-------FLTEGIIMKDFSH 89
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEY 1163
PNV++ G+ G L V +M +G LR+ + E H K LI + A GM+Y
Sbjct: 90 PNVLSLLGICLRSEGSPLV-VLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKY 147
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRGTLP--WM 1218
L SK VH DL N +++ K + KV DFGL++ K V LP WM
Sbjct: 148 LASKKFVHRDLAARNCMLDEKFTV----KVADFGLARDMYDKEXXSVHNKTGAKLPVKWM 203
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
A E L + K + K DV+SFG++LWE++T G PY +++ I ++ R P +
Sbjct: 204 ALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEY 260
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C +M +CW P +RPSF+E+ R+
Sbjct: 261 CPDPLYEVMLKCWHPKAEMRPSFSELVSRI 290
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin
Receptor Tyrosine Kinase
Length = 306
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 138/295 (46%), Gaps = 46/295 (15%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + L+ELG G+FG VY G R T VA+K + +S +S +ER +E
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES-----ASLRER--IE 66
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR---- 1147
F EA ++ +VV GVV G V E M +G L+ L S +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSK--GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 1148 -----RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
++ + +A + A GM YL++K VH +L N +V + K+GDFG+++ I
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTV----KIGDFGMTRDI 180
Query: 1202 KRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHY 1258
G +G LP WMAPE L S D++SFG+VLWEI + E+PY +
Sbjct: 181 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSS--DMWSFGVVLWEITSLAEQPYQGLSN 238
Query: 1259 GAII-----GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ GG ++ P C LM CW +P +RP+F EI L+
Sbjct: 239 EQVLKFVMDGGYLDQ------PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 138/295 (46%), Gaps = 46/295 (15%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ E + L+ELG G+FG VY G R T VA+K + +S +S +ER +E
Sbjct: 15 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES-----ASLRER--IE 67
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR---- 1147
F EA ++ +VV GVV G V E M +G L+ L S +
Sbjct: 68 FLNEASVMKGFTCHHVVRLLGVVSK--GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 125
Query: 1148 -----RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
++ + +A + A GM YL++K VH +L N +V + K+GDFG+++ I
Sbjct: 126 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTV----KIGDFGMTRDI 181
Query: 1202 KRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHY 1258
G +G LP WMAPE L S D++SFG+VLWEI + E+PY +
Sbjct: 182 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSS--DMWSFGVVLWEITSLAEQPYQGLSN 239
Query: 1259 GAII-----GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ GG ++ P C LM CW +P +RP+F EI L+
Sbjct: 240 EQVLKFVMDGGYLDQ------PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase In
Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase In
Complex With Arq 197
Length = 318
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 129/270 (47%), Gaps = 28/270 (10%)
Query: 1050 LGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G G FG VYHG D A+K + + G S+ F E I+ H
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-------FLTEGIIMKDFSH 108
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEY 1163
PNV++ G+ G L V +M +G LR+ + E H K LI + A GM+Y
Sbjct: 109 PNVLSLLGICLRSEGSPLV-VLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKY 166
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRGTLP--WM 1218
L SK VH DL N +++ K + KV DFGL++ K V LP WM
Sbjct: 167 LASKKFVHRDLAARNCMLDEKFTV----KVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 222
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
A E L + K + K DV+SFG++LWE++T G PY +++ I ++ R P +
Sbjct: 223 ALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEY 279
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C +M +CW P +RPSF+E+ R+
Sbjct: 280 CPDPLYEVMLKCWHPKAEMRPSFSELVSRI 309
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 136/293 (46%), Gaps = 32/293 (10%)
Query: 1033 ISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQ 1085
IS L+ + +++ ++ LG G FG VY G+ G VA+K + + SEQ
Sbjct: 36 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-----YSEQ 90
Query: 1086 ERLTLEFWREAEILSKLHHPNVVAFYGV-VQDGPGGTLATVTEFMVNGSLRHVLL----- 1139
+ L +F EA I+SK +H N+V GV +Q P L E M G L+ L
Sbjct: 91 DEL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL---LELMAGGDLKSFLRETRPR 145
Query: 1140 -SKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL 1198
S+ L L +A D A G +YL + +H D+ N L+ P R + K+GDFG+
Sbjct: 146 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR-VAKIGDFGM 204
Query: 1199 SK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYA 1254
++ I R + G LP WM PE + K D +SFG++LWEI + G PY
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 262
Query: 1255 NMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ + + P P C +M QCW P RP+F I R+
Sbjct: 263 SKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 129/270 (47%), Gaps = 28/270 (10%)
Query: 1050 LGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G G FG VYHG D A+K + + G S+ F E I+ H
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-------FLTEGIIMKDFSH 90
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEY 1163
PNV++ G+ G L V +M +G LR+ + E H K LI + A GM+Y
Sbjct: 91 PNVLSLLGICLRSEGSPLV-VLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKY 148
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRGTLP--WM 1218
L SK VH DL N +++ K + KV DFGL++ K V LP WM
Sbjct: 149 LASKKFVHRDLAARNCMLDEKFTV----KVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
A E L + K + K DV+SFG++LWE++T G PY +++ I ++ R P +
Sbjct: 205 ALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEY 261
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C +M +CW P +RPSF+E+ R+
Sbjct: 262 CPDPLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 129/270 (47%), Gaps = 28/270 (10%)
Query: 1050 LGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G G FG VYHG D A+K + + G S+ F E I+ H
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-------FLTEGIIMKDFSH 90
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEY 1163
PNV++ G+ G L V +M +G LR+ + E H K LI + A GM+Y
Sbjct: 91 PNVLSLLGICLRSEGSPLV-VLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKY 148
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRGTLP--WM 1218
L SK VH DL N +++ K + KV DFGL++ K V LP WM
Sbjct: 149 LASKKFVHRDLAARNCMLDEKFTV----KVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
A E L + K + K DV+SFG++LWE++T G PY +++ I ++ R P +
Sbjct: 205 ALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEY 261
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C +M +CW P +RPSF+E+ R+
Sbjct: 262 CPDPLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor
13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 129/270 (47%), Gaps = 28/270 (10%)
Query: 1050 LGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G G FG VYHG D A+K + + G S+ F E I+ H
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-------FLTEGIIMKDFSH 89
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEY 1163
PNV++ G+ G L V +M +G LR+ + E H K LI + A GM+Y
Sbjct: 90 PNVLSLLGICLRSEGSPLV-VLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKY 147
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRGTLP--WM 1218
L SK VH DL N +++ K + KV DFGL++ K V LP WM
Sbjct: 148 LASKKFVHRDLAARNCMLDEKFTV----KVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 203
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
A E L + K + K DV+SFG++LWE++T G PY +++ I ++ R P +
Sbjct: 204 ALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEY 260
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C +M +CW P +RPSF+E+ R+
Sbjct: 261 CPDPLYEVMLKCWHPKAEMRPSFSELVSRI 290
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide
Inhibitor
Length = 333
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 132/291 (45%), Gaps = 40/291 (13%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQERLTLEFWRE 1095
+L+ K LG+G FG V G VA+K +K T + E+E L E
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS---TAHADEKEALM----SE 99
Query: 1096 AEILSKL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR------- 1147
+I+S L H N+V G G G + +TE+ G L + L K R L+
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHG--GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 1148 ------RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI 1201
R L + A GM +L SKN +H D+ N+L+ + K+GDFGL++
Sbjct: 158 NSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH----VAKIGDFGLARD 213
Query: 1202 ---KRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
N +V G R + WMAPE + V DV+S+GI+LWEI + G PY +
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS--DVWSYGILLWEIFSLGLNPYPGIL 271
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
+ +V + + P F +M+ CWA +P RP+F +I L+
Sbjct: 272 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 129/270 (47%), Gaps = 28/270 (10%)
Query: 1050 LGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G G FG VYHG D A+K + + G S+ F E I+ H
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-------FLTEGIIMKDFSH 109
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEY 1163
PNV++ G+ G L V +M +G LR+ + E H K LI + A GM+Y
Sbjct: 110 PNVLSLLGICLRSEGSPLV-VLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKY 167
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRGTLP--WM 1218
L SK VH DL N +++ K + KV DFGL++ K V LP WM
Sbjct: 168 LASKKFVHRDLAARNCMLDEKFTV----KVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 223
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
A E L + K + K DV+SFG++LWE++T G PY +++ I ++ R P +
Sbjct: 224 ALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEY 280
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C +M +CW P +RPSF+E+ R+
Sbjct: 281 CPDPLYEVMLKCWHPKAEMRPSFSELVSRI 310
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 132/291 (45%), Gaps = 40/291 (13%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQERLTLEFWRE 1095
+L+ K LG+G FG V G VA+K +K T + E+E L E
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS---TAHADEKEALM----SE 99
Query: 1096 AEILSKL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR------- 1147
+I+S L H N+V G G G + +TE+ G L + L K R L+
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHG--GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 1148 ------RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI 1201
R L + A GM +L SKN +H D+ N+L+ + K+GDFGL++
Sbjct: 158 NSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH----VAKIGDFGLARD 213
Query: 1202 ---KRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
N +V G R + WMAPE + V DV+S+GI+LWEI + G PY +
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS--DVWSYGILLWEIFSLGLNPYPGIL 271
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
+ +V + + P F +M+ CWA +P RP+F +I L+
Sbjct: 272 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1
Length = 302
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 129/270 (47%), Gaps = 28/270 (10%)
Query: 1050 LGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G G FG VYHG D A+K + + G S+ F E I+ H
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-------FLTEGIIMKDFSH 88
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEY 1163
PNV++ G+ G L V +M +G LR+ + E H K LI + A GM+Y
Sbjct: 89 PNVLSLLGICLRSEGSPLV-VLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKY 146
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRGTLP--WM 1218
L SK VH DL N +++ K + KV DFGL++ K V LP WM
Sbjct: 147 LASKKFVHRDLAARNCMLDEKFTV----KVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 202
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
A E L + K + K DV+SFG++LWE++T G PY +++ I ++ R P +
Sbjct: 203 ALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEY 259
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C +M +CW P +RPSF+E+ R+
Sbjct: 260 CPDPLYEVMLKCWHPKAEMRPSFSELVSRI 289
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 129/270 (47%), Gaps = 28/270 (10%)
Query: 1050 LGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G G FG VYHG D A+K + + G S+ F E I+ H
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-------FLTEGIIMKDFSH 85
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEY 1163
PNV++ G+ G L V +M +G LR+ + E H K LI + A GM+Y
Sbjct: 86 PNVLSLLGICLRSEGSPLV-VLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKY 143
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRGTLP--WM 1218
L SK VH DL N +++ K + KV DFGL++ K V LP WM
Sbjct: 144 LASKKFVHRDLAARNCMLDEKFTV----KVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 199
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
A E L + K + K DV+SFG++LWE++T G PY +++ I ++ R P +
Sbjct: 200 ALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEY 256
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C +M +CW P +RPSF+E+ R+
Sbjct: 257 CPDPLYEVMLKCWHPKAEMRPSFSELVSRI 286
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of
C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain Of
C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With 4-(
3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With 4-(
(6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 129/270 (47%), Gaps = 28/270 (10%)
Query: 1050 LGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G G FG VYHG D A+K + + G S+ F E I+ H
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-------FLTEGIIMKDFSH 87
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEY 1163
PNV++ G+ G L V +M +G LR+ + E H K LI + A GM+Y
Sbjct: 88 PNVLSLLGICLRSEGSPLV-VLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKY 145
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRGTLP--WM 1218
L SK VH DL N +++ K + KV DFGL++ K V LP WM
Sbjct: 146 LASKKFVHRDLAARNCMLDEKFTV----KVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 201
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
A E L + K + K DV+SFG++LWE++T G PY +++ I ++ R P +
Sbjct: 202 ALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEY 258
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C +M +CW P +RPSF+E+ R+
Sbjct: 259 CPDPLYEVMLKCWHPKAEMRPSFSELVSRI 288
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An Arylamide
Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 131/293 (44%), Gaps = 42/293 (14%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQERLTLEFWRE 1095
+L+ K LG+G FG V G VA+K +K T + E+E L E
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS---TAHADEKEALM----SE 99
Query: 1096 AEILSKL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK------------- 1141
+I+S L H N+V G G G + +TE+ G L + L K
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHG--GPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSH 157
Query: 1142 --ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS 1199
E L R L + A GM +L SKN +H D+ N+L+ + K+GDFGL+
Sbjct: 158 NPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH----VAKIGDFGLA 213
Query: 1200 KI---KRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYAN 1255
+ N +V G R + WMAPE + V DV+S+GI+LWEI + G PY
Sbjct: 214 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS--DVWSYGILLWEIFSLGLNPYPG 271
Query: 1256 MHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
+ + +V + + P F +M+ CWA +P RP+F +I L+
Sbjct: 272 ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 324
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 129/270 (47%), Gaps = 28/270 (10%)
Query: 1050 LGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G G FG VYHG D A+K + + G S+ F E I+ H
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-------FLTEGIIMKDFSH 82
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEY 1163
PNV++ G+ G L V +M +G LR+ + E H K LI + A GM+Y
Sbjct: 83 PNVLSLLGICLRSEGSPLV-VLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKY 140
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRGTLP--WM 1218
L SK VH DL N +++ K + KV DFGL++ K V LP WM
Sbjct: 141 LASKKFVHRDLAARNCMLDEKFTV----KVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 196
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
A E L + K + K DV+SFG++LWE++T G PY +++ I ++ R P +
Sbjct: 197 ALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEY 253
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
C +M +CW P +RPSF+E+ R+
Sbjct: 254 CPDPLYEVMLKCWHPKAEMRPSFSELVSRI 283
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Pyrrolotriazine Based Inhibitor
Length = 373
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 130/274 (47%), Gaps = 36/274 (13%)
Query: 1050 LGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G G FG VYHG D A+K + + G S+ F E I+ H
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-------FLTEGIIMKDFSH 149
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEY 1163
PNV++ G+ G L V +M +G LR+ + E H K LI + A GM++
Sbjct: 150 PNVLSLLGICLRSEGSPL-VVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKF 207
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---------IKRNTLVTGGVRGT 1214
L SK VH DL N +++ K + KV DFGL++ + T G +
Sbjct: 208 LASKKFVHRDLAARNCMLDEKFTV----KVADFGLARDMYDKEFDSVHNKT----GAKLP 259
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ WMA E L + K + K DV+SFG++LWE++T G PY +++ I ++ R
Sbjct: 260 VKWMALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLL 316
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
P +C +M +CW P +RPSF+E+ R+
Sbjct: 317 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 350
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 137/299 (45%), Gaps = 48/299 (16%)
Query: 1037 QIIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
+I + DL + LG G FG R T + + K R E+ + T F +E
Sbjct: 5 RIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVM--VMKELI--RFDEETQRT--FLKEV 58
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
+++ L HPNV+ F GV+ L +TE++ G+LR ++ S + +R+ A D
Sbjct: 59 KVMRCLEHPNVLKFIGVLYKD--KRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKD 116
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------------- 1201
A GM YLHS NI+H DL N LV + V DFGL+++
Sbjct: 117 IASGMAYLHSMNIIHRDLNSHNCLVRENKNV----VVADFGLARLMVDEKTQPEGLRSLK 172
Query: 1202 -----KRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEIL---TGEEPY 1253
KR T+V G WMAPE++NG S EKVDVFSFGIVL EI+ + Y
Sbjct: 173 KPDRKKRYTVV-----GNPYWMAPEMINGRSY--DEKVDVFSFGIVLCEIIGRVNADPDY 225
Query: 1254 A--NMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
M +G + G ++ P C + + +C DP RPSF ++ L +
Sbjct: 226 LPRTMDFGLNVRGFLDRY----CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL 280
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 109 bits (273), Expect = 8e-24, Method: Composition-based stats.
Identities = 96/300 (32%), Positives = 135/300 (45%), Gaps = 42/300 (14%)
Query: 1039 IKNEDLEELKELGSGTFGTVY----HGKWRGTD---VAIKRIKKSCFTGRSSEQERLTLE 1091
IK D+ ELG G FG V+ H D VA+K +K++ + R +
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ--------D 66
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH------- 1144
F REAE+L+ L H ++V F+GV +G L V E+M +G L L S
Sbjct: 67 FQREAELLTMLQHQHIVRFFGVCTEGR--PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 124
Query: 1145 -------LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFG 1197
L + L +A A GM YL + VH DL N LV + K+GDFG
Sbjct: 125 EDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQG----LVVKIGDFG 180
Query: 1198 LSK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPY 1253
+S+ I G R LP WM PE + K + + DV+SFG+VLWEI T G++P+
Sbjct: 181 MSRDIYSTDYYRVGGRTMLPIRWMPPESI--LYRKFTTESDVWSFGVVLWEIFTYGKQPW 238
Query: 1254 ANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAA 1313
+ I I P C E +M CW +P R S ++ RL+ ++ A
Sbjct: 239 YQLSNTEAIDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 297
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 109 bits (273), Expect = 8e-24, Method: Composition-based stats.
Identities = 96/300 (32%), Positives = 135/300 (45%), Gaps = 42/300 (14%)
Query: 1039 IKNEDLEELKELGSGTFGTVY----HGKWRGTD---VAIKRIKKSCFTGRSSEQERLTLE 1091
IK D+ ELG G FG V+ H D VA+K +K++ + R +
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ--------D 60
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH------- 1144
F REAE+L+ L H ++V F+GV +G L V E+M +G L L S
Sbjct: 61 FQREAELLTMLQHQHIVRFFGVCTEGR--PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 118
Query: 1145 -------LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFG 1197
L + L +A A GM YL + VH DL N LV + K+GDFG
Sbjct: 119 EDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQG----LVVKIGDFG 174
Query: 1198 LSK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPY 1253
+S+ I G R LP WM PE + K + + DV+SFG+VLWEI T G++P+
Sbjct: 175 MSRDIYSTDYYRVGGRTMLPIRWMPPESI--LYRKFTTESDVWSFGVVLWEIFTYGKQPW 232
Query: 1254 ANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAA 1313
+ I I P C E +M CW +P R S ++ RL+ ++ A
Sbjct: 233 YQLSNTEAIDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 291
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 109 bits (273), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 130/274 (47%), Gaps = 36/274 (13%)
Query: 1050 LGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G G FG VYHG D A+K + + G S+ F E I+ H
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-------FLTEGIIMKDFSH 91
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEY 1163
PNV++ G+ G L V +M +G LR+ + E H K LI + A GM++
Sbjct: 92 PNVLSLLGICLRSEGSPLV-VLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKF 149
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---------IKRNTLVTGGVRGT 1214
L SK VH DL N +++ K + KV DFGL++ + T G +
Sbjct: 150 LASKKFVHRDLAARNCMLDEKFTV----KVADFGLARDMYDKEFDSVHNKT----GAKLP 201
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ WMA E L + K + K DV+SFG++LWE++T G PY +++ I ++ R
Sbjct: 202 VKWMALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLL 258
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
P +C +M +CW P +RPSF+E+ R+
Sbjct: 259 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 292
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 109 bits (273), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 130/274 (47%), Gaps = 36/274 (13%)
Query: 1050 LGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G G FG VYHG D A+K + + G S+ F E I+ H
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-------FLTEGIIMKDFSH 91
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEY 1163
PNV++ G+ G L V +M +G LR+ + E H K LI + A GM++
Sbjct: 92 PNVLSLLGICLRSEGSPLV-VLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKF 149
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---------IKRNTLVTGGVRGT 1214
L SK VH DL N +++ K + KV DFGL++ + T G +
Sbjct: 150 LASKKFVHRDLAARNCMLDEKFTV----KVADFGLARDMLDKEFDSVHNKT----GAKLP 201
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ WMA E L + K + K DV+SFG++LWE++T G PY +++ I ++ R
Sbjct: 202 VKWMALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLL 258
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
P +C +M +CW P +RPSF+E+ R+
Sbjct: 259 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 292
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 109 bits (273), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 130/274 (47%), Gaps = 36/274 (13%)
Query: 1050 LGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G G FG VYHG D A+K + + G S+ F E I+ H
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-------FLTEGIIMKDFSH 95
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEY 1163
PNV++ G+ G L V +M +G LR+ + E H K LI + A GM++
Sbjct: 96 PNVLSLLGICLRSEGSPLV-VLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKF 153
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---------IKRNTLVTGGVRGT 1214
L SK VH DL N +++ K + KV DFGL++ + T G +
Sbjct: 154 LASKKFVHRDLAARNCMLDEKFTV----KVADFGLARDMYDKEFDSVHNKT----GAKLP 205
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ WMA E L + K + K DV+SFG++LWE++T G PY +++ I ++ R
Sbjct: 206 VKWMALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLL 262
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
P +C +M +CW P +RPSF+E+ R+
Sbjct: 263 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 296
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 109 bits (273), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 130/274 (47%), Gaps = 36/274 (13%)
Query: 1050 LGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G G FG VYHG D A+K + + G S+ F E I+ H
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-------FLTEGIIMKDFSH 88
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEY 1163
PNV++ G+ G L V +M +G LR+ + E H K LI + A GM++
Sbjct: 89 PNVLSLLGICLRSEGSPLV-VLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKF 146
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---------IKRNTLVTGGVRGT 1214
L SK VH DL N +++ K + KV DFGL++ + T G +
Sbjct: 147 LASKKFVHRDLAARNCMLDEKFTV----KVADFGLARDMYDKEFDSVHNKT----GAKLP 198
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ WMA E L + K + K DV+SFG++LWE++T G PY +++ I ++ R
Sbjct: 199 VKWMALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLL 255
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
P +C +M +CW P +RPSF+E+ R+
Sbjct: 256 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 289
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepat
Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 130/274 (47%), Gaps = 36/274 (13%)
Query: 1050 LGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G G FG VYHG D A+K + + G S+ F E I+ H
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-------FLTEGIIMKDFSH 90
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEY 1163
PNV++ G+ G L V +M +G LR+ + E H K LI + A GM++
Sbjct: 91 PNVLSLLGICLRSEGSPLV-VLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKF 148
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---------IKRNTLVTGGVRGT 1214
L SK VH DL N +++ K + KV DFGL++ + T G +
Sbjct: 149 LASKKFVHRDLAARNCMLDEKFTV----KVADFGLARDMYDKEFDSVHNKT----GAKLP 200
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ WMA E L + K + K DV+SFG++LWE++T G PY +++ I ++ R
Sbjct: 201 VKWMALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLL 257
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
P +C +M +CW P +RPSF+E+ R+
Sbjct: 258 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 1046 ELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
E KELGSG FGTV G ++ V + L E EA ++ +L +P
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKT--VAVKILKNEANDPALKDELLAEANVMQQLDNP 431
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
+V G+ + + V E G L L + RH+ + + + + GM+YL
Sbjct: 432 YIVRMIGICE---AESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLE 487
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR--NTLVTGGVRGTLP--WMAPE 1221
N VH DL N+L+ + K+ DFGLSK R G P W APE
Sbjct: 488 ESNFVHRDLAARNVLLVTQH----YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 543
Query: 1222 LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDS 1280
+N K S K DV+SFG+++WE + G++PY M G+ + ++ R P C
Sbjct: 544 CIN--YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-GSEVTAMLEKGERMGCPAGCPR 600
Query: 1281 EWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
E LM CW D RP F + RLR
Sbjct: 601 EMYDLMNLCWTYDVENRPGFAAVELRLR 628
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 130/274 (47%), Gaps = 36/274 (13%)
Query: 1050 LGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+G G FG VYHG D A+K + + G S+ F E I+ H
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-------FLTEGIIMKDFSH 90
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEY 1163
PNV++ G+ G L V +M +G LR+ + E H K LI + A GM++
Sbjct: 91 PNVLSLLGICLRSEGSPLV-VLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKF 148
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---------IKRNTLVTGGVRGT 1214
L SK VH DL N +++ K + KV DFGL++ + T G +
Sbjct: 149 LASKKFVHRDLAARNCMLDEKFTV----KVADFGLARDMYDKEFDSVHNKT----GAKLP 200
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPP 1273
+ WMA E L + K + K DV+SFG++LWE++T G PY +++ I ++ R
Sbjct: 201 VKWMALESLQ--TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLL 257
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
P +C +M +CW P +RPSF+E+ R+
Sbjct: 258 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 1046 ELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
E KELGSG FGTV G ++ V + L E EA ++ +L +P
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKT--VAVKILKNEANDPALKDELLAEANVMQQLDNP 430
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
+V G+ + + V E G L L + RH+ + + + + GM+YL
Sbjct: 431 YIVRMIGICE---AESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLE 486
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR--NTLVTGGVRGTLP--WMAPE 1221
N VH DL N+L+ + K+ DFGLSK R G P W APE
Sbjct: 487 ESNFVHRDLAARNVLLVTQH----YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 542
Query: 1222 LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDS 1280
+N K S K DV+SFG+++WE + G++PY M G+ + ++ R P C
Sbjct: 543 CIN--YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-GSEVTAMLEKGERMGCPAGCPR 599
Query: 1281 EWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
E LM CW D RP F + RLR
Sbjct: 600 EMYDLMNLCWTYDVENRPGFAAVELRLR 627
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine
Derivatives As Potent, Selective Tie-2 Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of Triazine
Derivatives As Potent, Selective Tie-2 Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent 2-(Pyridin-2-Yl)-
1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent 2-(Pyridin-2-Yl)-
1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 137/305 (44%), Gaps = 43/305 (14%)
Query: 1030 NFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRG----TDVAIKRIKKSCFTGRSSEQ 1085
N D + ++ D++ +G G FG V + + D AIKR+K+ S +
Sbjct: 3 NPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA----SKDD 58
Query: 1086 ERLTLEFWREAEILSKL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH 1144
R +F E E+L KL HHPN++ G + G L E+ +G+L L K R
Sbjct: 59 HR---DFAGELEVLCKLGHHPNIINLLGACEHR--GYLYLAIEYAPHGNLLD-FLRKSRV 112
Query: 1145 LDR----------------RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIR 1188
L+ ++ L A D A GM+YL K +H DL N+LV
Sbjct: 113 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN---- 168
Query: 1189 PICKVGDFGLSKIKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEI 1246
+ K+ DFGLS+ + + G LP WMA E LN S + DV+S+G++LWEI
Sbjct: 169 YVAKIADFGLSRGQE--VYVKKTMGRLPVRWMAIESLNYSVYTTNS--DVWSYGVLLWEI 224
Query: 1247 LT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
++ G PY M + + R P CD E LM QCW P RPSF +I
Sbjct: 225 VSLGGTPYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 283
Query: 1306 RLRVM 1310
L M
Sbjct: 284 SLNRM 288
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 137/305 (44%), Gaps = 43/305 (14%)
Query: 1030 NFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRG----TDVAIKRIKKSCFTGRSSEQ 1085
N D + ++ D++ +G G FG V + + D AIKR+K+ S +
Sbjct: 13 NPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA----SKDD 68
Query: 1086 ERLTLEFWREAEILSKL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH 1144
R +F E E+L KL HHPN++ G + G L E+ +G+L L K R
Sbjct: 69 HR---DFAGELEVLCKLGHHPNIINLLGACEHR--GYLYLAIEYAPHGNLLD-FLRKSRV 122
Query: 1145 LDR----------------RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIR 1188
L+ ++ L A D A GM+YL K +H DL N+LV
Sbjct: 123 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN---- 178
Query: 1189 PICKVGDFGLSKIKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEI 1246
+ K+ DFGLS+ + + G LP WMA E LN S + DV+S+G++LWEI
Sbjct: 179 YVAKIADFGLSRGQE--VYVKKTMGRLPVRWMAIESLNYSVYTTNS--DVWSYGVLLWEI 234
Query: 1247 LT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
++ G PY M + + R P CD E LM QCW P RPSF +I
Sbjct: 235 VSLGGTPYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 293
Query: 1306 RLRVM 1310
L M
Sbjct: 294 SLNRM 298
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 137/308 (44%), Gaps = 42/308 (13%)
Query: 1031 FDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSS 1083
F + + IK D+ ELG G FG V+ + VA+K +K++ + R
Sbjct: 30 FSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ- 88
Query: 1084 EQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLS--- 1140
+F REAE+L+ L H ++V F+GV +G L V E+M +G L L S
Sbjct: 89 -------DFQREAELLTMLQHQHIVRFFGVCTEGR--PLLMVFEYMRHGDLNRFLRSHGP 139
Query: 1141 -----------KERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRP 1189
L + L +A A GM YL + VH DL N LV
Sbjct: 140 DAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQG----L 195
Query: 1190 ICKVGDFGLSK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEI 1246
+ K+GDFG+S+ I G R LP WM PE + K + + DV+SFG+VLWEI
Sbjct: 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESI--LYRKFTTESDVWSFGVVLWEI 253
Query: 1247 LT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
T G++P+ + I I P C E +M CW +P R S ++
Sbjct: 254 FTYGKQPWYQLSNTEAIDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHA 312
Query: 1306 RLRVMSAA 1313
RL+ ++ A
Sbjct: 313 RLQALAQA 320
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain
Of Csf-1r
Length = 324
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQERLTLEFWRE 1095
+L+ K LG+G FG V G VA+K +K T + E+E L E
Sbjct: 32 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS---TAHADEKEALM----SE 84
Query: 1096 AEILSKL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL---------------- 1138
+I+S L H N+V G G G + +TE+ G L + L
Sbjct: 85 LKIMSHLGQHENIVNLLGACTHG--GPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQ 142
Query: 1139 ----LSKE--RHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICK 1192
L KE R L+ R L + A GM +L SKN +H D+ N+L+ + K
Sbjct: 143 DPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH----VAK 198
Query: 1193 VGDFGLSKI---KRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT- 1248
+GDFGL++ N +V G R + WMAPE + V DV+S+GI+LWEI +
Sbjct: 199 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS--DVWSYGILLWEIFSL 256
Query: 1249 GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
G PY + + +V + + P F +M+ CWA +P RP+F +I L+
Sbjct: 257 GLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 316
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 141/282 (50%), Gaps = 31/282 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 17 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 74
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ +T+ M G L + + ++
Sbjct: 75 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGS 126
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 127 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 182
Query: 1204 NTLVTGGVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAI 1261
GG + + WMA E +L+ + S DV+S+G+ +WE++T G +PY + +
Sbjct: 183 EYHAEGG-KVPIKWMALESILHRIYTHQS---DVWSYGVTVWELMTFGSKPYDGIP-ASE 237
Query: 1262 IGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I I+ R P P C + ++M +CW D RP F E+
Sbjct: 238 ISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 279
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 136/285 (47%), Gaps = 21/285 (7%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ L+I+K + +++K LGSG FGTVY G W G V I K R + + E
Sbjct: 32 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL---REATSPKANKE 88
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRL 1151
EA +++ + +P+V G+ T+ +T+ M G L + + ++ + L
Sbjct: 89 ILDEAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLL 145
Query: 1152 IIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLV 1207
+ A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 146 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEKEYHA 201
Query: 1208 TGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIV 1266
GG + + WMA E + + + DV+S+G+ +WE++T G +PY + + I I+
Sbjct: 202 EGG-KVPIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEISSIL 257
Query: 1267 NNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 1311
R P P C + ++M +CW D RP F E+ M+
Sbjct: 258 EKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 302
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 107 bits (268), Expect = 3e-23, Method: Composition-based stats.
Identities = 85/268 (31%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 1046 ELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
E KELGSG FGTV G ++ V K + L E EA ++ +L +P
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVK--ILKNEANDPALKDELLAEANVMQQLDNP 68
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
+V G+ + + V E G L L + RH+ + + + + GM+YL
Sbjct: 69 YIVRMIGICE---AESWMLVMEMAELGPLNK-YLQQNRHVKDKNIIELVHQVSMGMKYLE 124
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR--NTLVTGGVRGTLP--WMAPE 1221
N VH DL N+L+ + K+ DFGLSK R G P W APE
Sbjct: 125 ESNFVHRDLAARNVLLVTQH----YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 180
Query: 1222 LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDS 1280
+N K S K DV+SFG+++WE + G++PY M G+ + ++ R P C
Sbjct: 181 CIN--YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-GSEVTAMLEKGERMGCPAGCPR 237
Query: 1281 EWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
E LM CW D RP F + RLR
Sbjct: 238 EMYDLMNLCWTYDVENRPGFAAVELRLR 265
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 139/281 (49%), Gaps = 29/281 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 67
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ +T+ M G L + + ++
Sbjct: 68 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGS 119
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 175
Query: 1204 NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAII 1262
GG + + WMA E + + + DV+S+G+ +WE++T G +PY + + I
Sbjct: 176 EYHAEGG-KVPIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEI 231
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I+ R P P C + ++M +CW D RP F E+
Sbjct: 232 SSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 272
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 119/266 (44%), Gaps = 18/266 (6%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
KELGSG FGTV G ++ V K + L E EA ++ +L +P +
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVK--ILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
V G+ + + V E G L L + RH+ + + + + GM+YL
Sbjct: 91 VRMIGICE---AESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEES 146
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR--NTLVTGGVRGTLP--WMAPELL 1223
N VH DL N+L+ + K+ DFGLSK R G P W APE +
Sbjct: 147 NFVHRDLAARNVLL----VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 1224 NGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEW 1282
N K S K DV+SFG+++WE + G++PY M G+ + ++ R P C E
Sbjct: 203 N--YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-GSEVTAMLEKGERMGCPAGCPREM 259
Query: 1283 RLLMEQCWAPDPVVRPSFTEIARRLR 1308
LM CW D RP F + RLR
Sbjct: 260 YDLMNLCWTYDVENRPGFAAVELRLR 285
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 119/266 (44%), Gaps = 18/266 (6%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
KELGSG FGTV G ++ V K + L E EA ++ +L +P +
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVK--ILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
V G+ + + V E G L L + RH+ + + + + GM+YL
Sbjct: 91 VRMIGICE---AESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEES 146
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR--NTLVTGGVRGTLP--WMAPELL 1223
N VH DL N+L+ + K+ DFGLSK R G P W APE +
Sbjct: 147 NFVHRDLAARNVLL----VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 1224 NGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEW 1282
N K S K DV+SFG+++WE + G++PY M G+ + ++ R P C E
Sbjct: 203 N--YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-GSEVTAMLEKGERMGCPAGCPREM 259
Query: 1283 RLLMEQCWAPDPVVRPSFTEIARRLR 1308
LM CW D RP F + RLR
Sbjct: 260 YDLMNLCWTYDVENRPGFAAVELRLR 285
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 107 bits (268), Expect = 4e-23, Method: Composition-based stats.
Identities = 85/268 (31%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 1046 ELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
E KELGSG FGTV G ++ V K + L E EA ++ +L +P
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVK--ILKNEANDPALKDELLAEANVMQQLDNP 72
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
+V G+ + + V E G L L + RH+ + + + + GM+YL
Sbjct: 73 YIVRMIGICE---AESWMLVMEMAELGPLNK-YLQQNRHVKDKNIIELVHQVSMGMKYLE 128
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR--NTLVTGGVRGTLP--WMAPE 1221
N VH DL N+L+ + K+ DFGLSK R G P W APE
Sbjct: 129 ESNFVHRDLAARNVLLVTQH----YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 184
Query: 1222 LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDS 1280
+N K S K DV+SFG+++WE + G++PY M G+ + ++ R P C
Sbjct: 185 CIN--YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-GSEVTAMLEKGERMGCPAGCPR 241
Query: 1281 EWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
E LM CW D RP F + RLR
Sbjct: 242 EMYDLMNLCWTYDVENRPGFAAVELRLR 269
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 119/266 (44%), Gaps = 18/266 (6%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
KELGSG FGTV G ++ V K + L E EA ++ +L +P +
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVK--ILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
V G+ + + V E G L L + RH+ + + + + GM+YL
Sbjct: 89 VRMIGICE---AESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEES 144
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR--NTLVTGGVRGTLP--WMAPELL 1223
N VH DL N+L+ + K+ DFGLSK R G P W APE +
Sbjct: 145 NFVHRDLAARNVLL----VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 200
Query: 1224 NGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEW 1282
N K S K DV+SFG+++WE + G++PY M G+ + ++ R P C E
Sbjct: 201 N--YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-GSEVTAMLEKGERMGCPAGCPREM 257
Query: 1283 RLLMEQCWAPDPVVRPSFTEIARRLR 1308
LM CW D RP F + RLR
Sbjct: 258 YDLMNLCWTYDVENRPGFAAVELRLR 283
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 142/305 (46%), Gaps = 44/305 (14%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQE 1086
+ +Q IK ++ +ELG G FG V+ + VA+K +K + R
Sbjct: 5 TFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARK---- 60
Query: 1087 RLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL-------- 1138
+F REAE+L+ L H ++V FYGV + G L V E+M +G L L
Sbjct: 61 ----DFHREAELLTNLQHEHIVKFYGVCVE--GDPLIMVFEYMKHGDLNKFLRAHGPDAV 114
Query: 1139 LSKE----RHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPICK 1192
L E L + + L IA A GM YL S++ VH DL N LV NL + K
Sbjct: 115 LMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL------LVK 168
Query: 1193 VGDFGLSKIKRNT---LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT- 1248
+GDFG+S+ +T V G + WM PE + K + + DV+S G+VLWEI T
Sbjct: 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI--MYRKFTTESDVWSLGVVLWEIFTY 226
Query: 1249 GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
G++P+ + +I I + P C E LM CW +P +R + I L+
Sbjct: 227 GKQPWYQLSNNEVIECITQGRVLQR-PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285
Query: 1309 VMSAA 1313
++ A
Sbjct: 286 NLAKA 290
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain With
4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 21/277 (7%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ L+I+K + +++K LGSG FGTVY G W G V I K R + + E
Sbjct: 13 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL---REATSPKANKE 69
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRL 1151
EA +++ + +P+V G+ T+ +T+ M G L + + ++ + L
Sbjct: 70 ILDEAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLL 126
Query: 1152 IIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLV 1207
+ A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 127 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEKEYHA 182
Query: 1208 TGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIV 1266
GG + + WMA E + + + DV+S+G+ +WE++T G +PY + + I I+
Sbjct: 183 EGG-KVPIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEISSIL 238
Query: 1267 NNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R P P C + ++M +CW D RP F E+
Sbjct: 239 EKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 275
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 136/276 (49%), Gaps = 19/276 (6%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFW 1093
+ L+I+K + +++K LGSG FGTVY G W +K I + R + + E
Sbjct: 41 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVK-IPVAIMELREATSPKANKEIL 99
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
EA +++ + +P+V G+ T+ +T+ M G L + + ++ + L
Sbjct: 100 DEAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 156
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTG 1209
+ A GM YL + +VH DL N+LV + K+ DFGL+K+ ++ G
Sbjct: 157 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEKEYHAEG 212
Query: 1210 GVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVN 1267
G + + WMA E +L+ + S DV+S+G+ +WE++T G +PY + + I I+
Sbjct: 213 G-KVPIKWMALESILHRIYTHQS---DVWSYGVTVWELMTFGSKPYDGIP-ASEISSILE 267
Query: 1268 NTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R P P C + ++M +CW D RP F E+
Sbjct: 268 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 303
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into
Receptor Autoregulation
Length = 343
Score = 107 bits (267), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 135/305 (44%), Gaps = 54/305 (17%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLEFWRE 1095
++E ++++G G FG V+ + G T VA+K +K+ + +F RE
Sbjct: 48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-------ASADMQADFQRE 100
Query: 1096 AEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH---------LD 1146
A ++++ +PN+V GV G + + E+M G L L S H L
Sbjct: 101 AALMAEFDNPNIVKLLGVC--AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 158
Query: 1147 RRKR--------------LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLV--NLKDPIRPI 1190
R R L IA A GM YL + VH DL N LV N+ +
Sbjct: 159 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM------V 212
Query: 1191 CKVGDFGLSK-IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEIL 1247
K+ DFGLS+ I +P WM PE + ++ + + DV+++G+VLWEI
Sbjct: 213 VKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI--FYNRYTTESDVWAYGVVLWEIF 270
Query: 1248 T-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARR 1306
+ G +PY M + +I + + + P C E LM CW+ P RPSF I R
Sbjct: 271 SYGLQPYYGMAHEEVIYYVRDGNILA-CPENCPLELYNLMRLCWSKLPADRPSFCSIHRI 329
Query: 1307 LRVMS 1311
L+ M
Sbjct: 330 LQRMC 334
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 107 bits (267), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 139/281 (49%), Gaps = 29/281 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 66
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ +T+ M G L + + ++
Sbjct: 67 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGS 118
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 174
Query: 1204 NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAII 1262
GG + + WMA E + + + DV+S+G+ +WE++T G +PY + + I
Sbjct: 175 EYHAEGG-KVPIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEI 230
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I+ R P P C + ++M +CW D RP F E+
Sbjct: 231 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 271
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 107 bits (267), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 139/281 (49%), Gaps = 29/281 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 67
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ +T+ M G L + + ++
Sbjct: 68 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGS 119
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 175
Query: 1204 NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAII 1262
GG + + WMA E + + + DV+S+G+ +WE++T G +PY + + I
Sbjct: 176 EYHAEGG-KVPIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEI 231
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I+ R P P C + ++M +CW D RP F E+
Sbjct: 232 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 272
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 107 bits (267), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 139/281 (49%), Gaps = 29/281 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 67
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ +T+ M G L + + ++
Sbjct: 68 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGS 119
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 175
Query: 1204 NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAII 1262
GG + + WMA E + + + DV+S+G+ +WE++T G +PY + + I
Sbjct: 176 EYHAEGG-KVPIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEI 231
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I+ R P P C + ++M +CW D RP F E+
Sbjct: 232 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 272
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 107 bits (266), Expect = 5e-23, Method: Composition-based stats.
Identities = 85/268 (31%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 1046 ELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
E KELGSG FGTV G ++ V K + L E EA ++ +L +P
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVK--ILKNEANDPALKDELLAEANVMQQLDNP 78
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
+V G+ + + V E G L L + RH+ + + + + GM+YL
Sbjct: 79 YIVRMIGICE---AESWMLVMEMAELGPLNK-YLQQNRHVKDKNIIELVHQVSMGMKYLE 134
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR--NTLVTGGVRGTLP--WMAPE 1221
N VH DL N+L+ + K+ DFGLSK R G P W APE
Sbjct: 135 ESNFVHRDLAARNVLLVTQH----YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 190
Query: 1222 LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDS 1280
+N K S K DV+SFG+++WE + G++PY M G+ + ++ R P C
Sbjct: 191 CIN--YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-GSEVTAMLEKGERMGCPAGCPR 247
Query: 1281 EWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
E LM CW D RP F + RLR
Sbjct: 248 EMYDLMNLCWTYDVENRPGFAAVELRLR 275
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 21/277 (7%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ L+I+K + +++K LGSG FGTVY G W G V I K R + + E
Sbjct: 14 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL---REATSPKANKE 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRL 1151
EA +++ + +P+V G+ T+ +T+ M G L + + ++ + L
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLL 127
Query: 1152 IIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLV 1207
+ A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 128 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEKEYHA 183
Query: 1208 TGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIV 1266
GG + + WMA E + + + DV+S+G+ +WE++T G +PY + + I I+
Sbjct: 184 EGG-KVPIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEISSIL 239
Query: 1267 NNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R P P C + ++M +CW D RP F E+
Sbjct: 240 EKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With Amp-
Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 141/282 (50%), Gaps = 31/282 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 64
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ +T+ M G L + + ++
Sbjct: 65 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGS 116
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 172
Query: 1204 NTLVTGGVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAI 1261
GG + + WMA E +L+ + S DV+S+G+ +WE++T G +PY + +
Sbjct: 173 EYHAEGG-KVPIKWMALESILHRIYTHQS---DVWSYGVTVWELMTFGSKPYDGIP-ASE 227
Query: 1262 IGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I I+ R P P C + ++M +CW D RP F E+
Sbjct: 228 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 135/300 (45%), Gaps = 49/300 (16%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT-------DVAIKRIKKSCFTGRSSEQERLTLEFWR 1094
E+LE K LGSG FG V + G VA+K +K+ SSE+E L
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEK---ADSSEREALM----S 97
Query: 1095 EAEILSKL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK-------ERHLD 1146
E +++++L H N+V G G + + E+ G L + L SK E +
Sbjct: 98 ELKMMTQLGSHENIVNLLGACT--LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 155
Query: 1147 RRKRL---------------IIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPIC 1191
+KRL A A GME+L K+ VH DL N+LV +
Sbjct: 156 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG----KVV 211
Query: 1192 KVGDFGLSK---IKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
K+ DFGL++ N +V G R + WMAPE L + K DV+S+GI+LWEI +
Sbjct: 212 KICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI--KSDVWSYGILLWEIFS 269
Query: 1249 -GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
G PY + A ++ N + P + E ++M+ CWA D RPSF + L
Sbjct: 270 LGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 142/283 (50%), Gaps = 31/283 (10%)
Query: 1033 ISTLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQE 1086
++ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 3 MALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKE 60
Query: 1087 RLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLD 1146
L EA +++ + +P+V G+ T+ +T+ M G L + + ++
Sbjct: 61 ILD-----EAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIG 112
Query: 1147 RRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----K 1202
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ +
Sbjct: 113 SQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEE 168
Query: 1203 RNTLVTGGVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGA 1260
+ GG + + WMA E +L+ + S DV+S+G+ +WE++T G +PY + +
Sbjct: 169 KEYHAEGG-KVPIKWMALESILHRIYTHQS---DVWSYGVTVWELMTFGSKPYDGIP-AS 223
Query: 1261 IIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I I+ R P P C + ++M +CW D RP F E+
Sbjct: 224 EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 266
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 141/282 (50%), Gaps = 31/282 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 64
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ +T+ M G L + + ++
Sbjct: 65 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGXLLDYVREHKDNIGS 116
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 172
Query: 1204 NTLVTGGVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAI 1261
GG + + WMA E +L+ + S DV+S+G+ +WE++T G +PY + +
Sbjct: 173 EYHAEGG-KVPIKWMALESILHRIYTHQS---DVWSYGVTVWELMTFGSKPYDGIP-ASE 227
Query: 1262 IGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I I+ R P P C + ++M +CW D RP F E+
Sbjct: 228 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 132/284 (46%), Gaps = 37/284 (13%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ +++LG G FG V ++ G VA+K +K ++ ++ E E
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKK-------EIE 75
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L+H N+V + G+ + G + + EF+ +GSL+ L + ++ +++L A+
Sbjct: 76 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI 135
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GM+YL S+ VH DL N+LV + + K+GDFGL+K K V
Sbjct: 136 CKGMDYLGSRQYVHRDLAARNVLVESEHQV----KIGDFGLTKAIETDKEXXTVKDDRDS 191
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----GEEPYANM------HYGAIIG 1263
+ W APE L S ++ DV+SFG+ L E+LT P A +G +
Sbjct: 192 PVFWYAPECLMQSKFYIAS--DVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTV 249
Query: 1264 GIVNNTL----RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
+ NTL R P P C E LM +CW P R SF +
Sbjct: 250 TRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNL 293
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 137/305 (44%), Gaps = 43/305 (14%)
Query: 1030 NFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRG----TDVAIKRIKKSCFTGRSSEQ 1085
N D + ++ D++ +G G FG V + + D AIKR+K+ S +
Sbjct: 10 NPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA----SKDD 65
Query: 1086 ERLTLEFWREAEILSKL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH 1144
R +F E E+L KL HHPN++ G + G L E+ +G+L L K R
Sbjct: 66 HR---DFAGELEVLCKLGHHPNIINLLGACEHR--GYLYLAIEYAPHGNLLD-FLRKSRV 119
Query: 1145 LDR----------------RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIR 1188
L+ ++ L A D A GM+YL K +H +L N+LV
Sbjct: 120 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGEN---- 175
Query: 1189 PICKVGDFGLSKIKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEI 1246
+ K+ DFGLS+ + + G LP WMA E LN S + DV+S+G++LWEI
Sbjct: 176 YVAKIADFGLSRGQE--VYVKKTMGRLPVRWMAIESLNYSVYTTNS--DVWSYGVLLWEI 231
Query: 1247 LT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
++ G PY M + + R P CD E LM QCW P RPSF +I
Sbjct: 232 VSLGGTPYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 290
Query: 1306 RLRVM 1310
L M
Sbjct: 291 SLNRM 295
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
Length = 327
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 141/282 (50%), Gaps = 31/282 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 64
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ +T+ M G L + + ++
Sbjct: 65 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGS 116
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 172
Query: 1204 NTLVTGGVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAI 1261
GG + + WMA E +L+ + S DV+S+G+ +WE++T G +PY + +
Sbjct: 173 EYHAEGG-KVPIKWMALESILHRIYTHQS---DVWSYGVTVWELMTFGSKPYDGIP-ASE 227
Query: 1262 IGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I I+ R P P C + ++M +CW D RP F E+
Sbjct: 228 ISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 269
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 119/266 (44%), Gaps = 18/266 (6%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
KELGSG FGTV G ++ V K + L E EA ++ +L +P +
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVK--ILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
V G+ + + V E G L L + RH+ + + + + GM+YL
Sbjct: 69 VRMIGICE---AESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEES 124
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR--NTLVTGGVRGTLP--WMAPELL 1223
N VH DL N+L+ + K+ DFGLSK R G P W APE +
Sbjct: 125 NFVHRDLAARNVLL----VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 180
Query: 1224 NGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEW 1282
N K S K DV+SFG+++WE + G++PY M G+ + ++ R P C E
Sbjct: 181 N--YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-GSEVTAMLEKGERMGCPAGCPREM 237
Query: 1283 RLLMEQCWAPDPVVRPSFTEIARRLR 1308
LM CW D RP F + RLR
Sbjct: 238 YDLMNLCWTYDVENRPGFAAVELRLR 263
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 119/266 (44%), Gaps = 18/266 (6%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
KELGSG FGTV G ++ V K + L E EA ++ +L +P +
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVK--ILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
V G+ + + V E G L L + RH+ + + + + GM+YL
Sbjct: 75 VRMIGICE---AESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEES 130
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR--NTLVTGGVRGTLP--WMAPELL 1223
N VH DL N+L+ + K+ DFGLSK R G P W APE +
Sbjct: 131 NFVHRDLAARNVLL----VTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECI 186
Query: 1224 NGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEW 1282
N K S K DV+SFG+++WE + G++PY M G+ + ++ R P C E
Sbjct: 187 N--YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-GSEVTAMLEKGERMGCPAGCPREM 243
Query: 1283 RLLMEQCWAPDPVVRPSFTEIARRLR 1308
LM CW D RP F + RLR
Sbjct: 244 YDLMNLCWTYDVENRPGFAAVELRLR 269
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 106 bits (265), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 132/284 (46%), Gaps = 37/284 (13%)
Query: 1044 LEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+ +++LG G FG V ++ G VA+K +K ++ ++ E E
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKK-------EIE 63
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
IL L+H N+V + G+ + G + + EF+ +GSL+ L + ++ +++L A+
Sbjct: 64 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI 123
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRG 1213
GM+YL S+ VH DL N+LV + + K+GDFGL+K K V
Sbjct: 124 CKGMDYLGSRQYVHRDLAARNVLVESEHQV----KIGDFGLTKAIETDKEXXTVKDDRDS 179
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT----GEEPYANM------HYGAIIG 1263
+ W APE L S ++ DV+SFG+ L E+LT P A +G +
Sbjct: 180 PVFWYAPECLMQSKFYIAS--DVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTV 237
Query: 1264 GIVNNTL----RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
+ NTL R P P C E LM +CW P R SF +
Sbjct: 238 TRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNL 281
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 141/282 (50%), Gaps = 31/282 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 1 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 58
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ +T+ M G L + + ++
Sbjct: 59 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGS 110
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 111 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 166
Query: 1204 NTLVTGGVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAI 1261
GG + + WMA E +L+ + S DV+S+G+ +WE++T G +PY + +
Sbjct: 167 EYHAEGG-KVPIKWMALESILHRIYTHQS---DVWSYGVTVWELMTFGSKPYDGIP-ASE 221
Query: 1262 IGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I I+ R P P C + ++M +CW D RP F E+
Sbjct: 222 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 263
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 152/321 (47%), Gaps = 43/321 (13%)
Query: 1014 LDLPTAGIPLVDLA-LGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWR-GTDVAIK 1071
D+P P V L L F + LQ+ +++ LG G FG VY G+ GT VA+K
Sbjct: 10 FDVPAEEDPEVHLGQLKRFSLRELQV-ASDNFSNKNILGRGGFGKVYKGRLADGTLVAVK 68
Query: 1072 RIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVN 1131
R+K+ G L+F E E++S H N++ G P L V +M N
Sbjct: 69 RLKEERXQGGE-------LQFQTEVEMISMAVHRNLLRLRGFCMT-PTERL-LVYPYMAN 119
Query: 1132 GSLRHVLLSKERH---LDRRKRLIIAMDAAFGMEYLHSK---NIVHFDLKCDNLLVNLKD 1185
GS+ L + LD KR IA+ +A G+ YLH I+H D+K N+L L +
Sbjct: 120 GSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANIL--LDE 177
Query: 1186 PIRPICKVGDFGLSKIK--RNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVL 1243
+ VGDFGL+K+ ++ V VRGT+ +APE L S+ K SEK DVF +G++L
Sbjct: 178 EFEAV--VGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYL--STGKSSEKTDVFGYGVML 233
Query: 1244 WEILTGEEPY-----AN----MHYGAIIGGIVNNTLRPPVP-----GFCDSEWRLLME-- 1287
E++TG+ + AN M + G + L V + D E L++
Sbjct: 234 LELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVA 293
Query: 1288 -QCWAPDPVVRPSFTEIARRL 1307
C P+ RP +E+ R L
Sbjct: 294 LLCTQSSPMERPKMSEVVRML 314
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With
Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex With
Amp-Pnp
Length = 344
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 136/285 (47%), Gaps = 27/285 (9%)
Query: 1037 QIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTL 1090
+I K +L +LK LGSG FGTV+ G W V IK I+ +GR S Q
Sbjct: 26 RIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK--SGRQSFQAVTD- 82
Query: 1091 EFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKR 1150
+ L H ++V G+ PG +L VT+++ GSL + L +
Sbjct: 83 ----HMLAIGSLDHAHIVRLLGLC---PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLL 135
Query: 1151 LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI---KRNTLV 1207
L + A GM YL +VH +L N+L LK P + +V DFG++ + L+
Sbjct: 136 LNWGVQIAKGMYYLEEHGMVHRNLAARNVL--LKSPSQ--VQVADFGVADLLPPDDKQLL 191
Query: 1208 TGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIV 1266
+ + WMA E ++ K + + DV+S+G+ +WE++T G EPYA + A + ++
Sbjct: 192 YSEAKTPIKWMALESIH--FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-AEVPDLL 248
Query: 1267 NNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 1311
R P C + ++M +CW D +RP+F E+A M+
Sbjct: 249 EKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 293
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 138/281 (49%), Gaps = 29/281 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 11 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 68
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ + + M G L + + ++
Sbjct: 69 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGS 120
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 121 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 176
Query: 1204 NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAII 1262
GG + + WMA E + + + DV+S+G+ +WE++T G +PY + + I
Sbjct: 177 EYHAEGG-KVPIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEI 232
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I+ R P P C + ++M +CW D RP F E+
Sbjct: 233 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 273
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 138/281 (49%), Gaps = 29/281 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 66
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ +T+ M G L + + ++
Sbjct: 67 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGS 118
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFG +K+ ++
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGRAKLLGAEEK 174
Query: 1204 NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAII 1262
GG + + WMA E + + + DV+S+G+ +WE++T G +PY + + I
Sbjct: 175 EYHAEGG-KVPIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEI 230
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I+ R P P C + ++M +CW D RP F E+
Sbjct: 231 SSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 271
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 140/282 (49%), Gaps = 31/282 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 8 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 65
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ + + M G L + + ++
Sbjct: 66 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGS 117
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 118 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 173
Query: 1204 NTLVTGGVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAI 1261
GG + + WMA E +L+ + S DV+S+G+ +WE++T G +PY + +
Sbjct: 174 EYHAEGG-KVPIKWMALESILHRIYTHQS---DVWSYGVTVWELMTFGSKPYDGIP-ASE 228
Query: 1262 IGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I I+ R P P C + ++M +CW D RP F E+
Sbjct: 229 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 270
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 138/281 (49%), Gaps = 29/281 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 67
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ + + M G L + + ++
Sbjct: 68 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGS 119
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 175
Query: 1204 NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAII 1262
GG + + WMA E + + + DV+S+G+ +WE++T G +PY + + I
Sbjct: 176 EYHAEGG-KVPIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEI 231
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I+ R P P C + ++M +CW D RP F E+
Sbjct: 232 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 272
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 140/282 (49%), Gaps = 31/282 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 64
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ + + M G L + + ++
Sbjct: 65 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGS 116
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 172
Query: 1204 NTLVTGGVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAI 1261
GG + + WMA E +L+ + S DV+S+G+ +WE++T G +PY + +
Sbjct: 173 EYHAEGG-KVPIKWMALESILHRIYTHQS---DVWSYGVTVWELMTFGSKPYDGIP-ASE 227
Query: 1262 IGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I I+ R P P C + ++M +CW D RP F E+
Sbjct: 228 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 138/281 (49%), Gaps = 29/281 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 66
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ + + M G L + + ++
Sbjct: 67 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGS 118
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 174
Query: 1204 NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAII 1262
GG + + WMA E + + + DV+S+G+ +WE++T G +PY + + I
Sbjct: 175 EYHAEGG-KVPIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEI 230
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I+ R P P C + ++M +CW D RP F E+
Sbjct: 231 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 271
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 140/282 (49%), Gaps = 31/282 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 8 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 65
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ + + M G L + + ++
Sbjct: 66 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLIMQLMPFGXLLDYVREHKDNIGS 117
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 118 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 173
Query: 1204 NTLVTGGVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAI 1261
GG + + WMA E +L+ + S DV+S+G+ +WE++T G +PY + +
Sbjct: 174 EYHAEGG-KVPIKWMALESILHRIYTHQS---DVWSYGVTVWELMTFGSKPYDGIP-ASE 228
Query: 1262 IGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I I+ R P P C + ++M +CW D RP F E+
Sbjct: 229 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 270
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 140/282 (49%), Gaps = 31/282 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K L SG FGTVY G W VAIK ++++ T + +E
Sbjct: 7 ALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 64
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ +T+ M G L + + ++
Sbjct: 65 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGS 116
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 172
Query: 1204 NTLVTGGVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAI 1261
GG + + WMA E +L+ + S DV+S+G+ +WE++T G +PY + +
Sbjct: 173 EYHAEGG-KVPIKWMALESILHRIYTHQS---DVWSYGVTVWELMTFGSKPYDGIP-ASE 227
Query: 1262 IGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I I+ R P P C + ++M +CW D RP F E+
Sbjct: 228 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 138/281 (49%), Gaps = 29/281 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K L SG FGTVY G W VAIK ++++ T + +E
Sbjct: 14 ALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 71
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ +T+ M G L + + ++
Sbjct: 72 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGS 123
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 179
Query: 1204 NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAII 1262
GG + + WMA E + + + DV+S+G+ +WE++T G +PY + + I
Sbjct: 180 EYHAEGG-KVPIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEI 235
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I+ R P P C + ++M +CW D RP F E+
Sbjct: 236 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 136/285 (47%), Gaps = 27/285 (9%)
Query: 1037 QIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQERLTL 1090
+I K +L +LK LGSG FGTV+ G W V IK I+ +GR S Q
Sbjct: 8 RIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK--SGRQSFQAVTD- 64
Query: 1091 EFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKR 1150
+ L H ++V G+ PG +L VT+++ GSL + L +
Sbjct: 65 ----HMLAIGSLDHAHIVRLLGLC---PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLL 117
Query: 1151 LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI---KRNTLV 1207
L + A GM YL +VH +L N+L LK P + +V DFG++ + L+
Sbjct: 118 LNWGVQIAKGMYYLEEHGMVHRNLAARNVL--LKSPSQ--VQVADFGVADLLPPDDKQLL 173
Query: 1208 TGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIV 1266
+ + WMA E ++ K + + DV+S+G+ +WE++T G EPYA + A + ++
Sbjct: 174 YSEAKTPIKWMALESIH--FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-AEVPDLL 230
Query: 1267 NNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 1311
R P C + ++M +CW D +RP+F E+A M+
Sbjct: 231 EKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 138/281 (49%), Gaps = 29/281 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 14 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 71
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ +T+ M G L + + ++
Sbjct: 72 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGS 123
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFG +K+ ++
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGRAKLLGAEEK 179
Query: 1204 NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAII 1262
GG + + WMA E + + + DV+S+G+ +WE++T G +PY + + I
Sbjct: 180 EYHAEGG-KVPIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEI 235
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I+ R P P C + ++M +CW D RP F E+
Sbjct: 236 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 140/282 (49%), Gaps = 31/282 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 64
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ +T+ M G L + + ++
Sbjct: 65 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGS 116
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFG +K+ ++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGRAKLLGAEEK 172
Query: 1204 NTLVTGGVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAI 1261
GG + + WMA E +L+ + S DV+S+G+ +WE++T G +PY + +
Sbjct: 173 EYHAEGG-KVPIKWMALESILHRIYTHQS---DVWSYGVTVWELMTFGSKPYDGIP-ASE 227
Query: 1262 IGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I I+ R P P C + ++M +CW D RP F E+
Sbjct: 228 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 130/284 (45%), Gaps = 19/284 (6%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
+ L+I+K +L ++K LGSG FGTVY G W G +V I K R + + E
Sbjct: 9 ALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVL---RENTSPKANKE 65
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRL 1151
EA +++ + P V G+ T+ VT+ M G L + L + L
Sbjct: 66 ILDEAYVMAGVGSPYVSRLLGICLT---STVQLVTQLMPYGCLLDHVRENRGRLGSQDLL 122
Query: 1152 IIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVT 1208
M A GM YL +VH DL N+LV + + K+ DFGL++ I
Sbjct: 123 NWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHV----KITDFGLARLLDIDETEYHA 178
Query: 1209 GGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVN 1267
G + + WMA E + + + + DV+S+G+ +WE++T G +PY + I ++
Sbjct: 179 DGGKVPIKWMALESI--LRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP-AREIPDLLE 235
Query: 1268 NTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 1311
R P P C + ++M +CW D RP F E+ M+
Sbjct: 236 KGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMA 279
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 137/281 (48%), Gaps = 29/281 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 66
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ + + M G L + + ++
Sbjct: 67 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGS 118
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFG +K+ ++
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGRAKLLGAEEK 174
Query: 1204 NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAII 1262
GG + + WMA E + + + DV+S+G+ +WE++T G +PY + + I
Sbjct: 175 EYHAEGG-KVPIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEI 230
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I+ R P P C + ++M +CW D RP F E+
Sbjct: 231 SSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 271
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 126/287 (43%), Gaps = 41/287 (14%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG V G D VA+K +K+ G + + R + E +IL
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMS---ELKILI 76
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKER---------------H 1144
+ HH NVV G PGG L +TEF G+L L SK
Sbjct: 77 HIGHHLNVVNLLGACTK-PGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKR 1203
L + + A GME+L S+ +H DL N+L++ K+ + K+ DFGL++ I +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN----VVKICDFGLARDIXK 191
Query: 1204 --NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGA 1260
+ + G R L WMAPE + + DV+SFG++LWEI + G PY +
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPYPGVKIDE 249
Query: 1261 IIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ R P + E M CW +P RP+F+E+ L
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 132/295 (44%), Gaps = 56/295 (18%)
Query: 1047 LKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
++ELG FG VY G G VAIK +K + L EF EA +
Sbjct: 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-------DKAEGPLREEFRHEAMLR 83
Query: 1100 SKLHHPNVVAFYGVV-QDGPGGTLATVTEFMVNGSLRHVLLSKERH-------------- 1144
++L HPNVV GVV +D P L+ + + +G L L+ + H
Sbjct: 84 ARLQHPNVVCLLGVVTKDQP---LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 1145 -LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL----- 1198
L+ + + A GMEYL S ++VH DL N+LV K + K+ D GL
Sbjct: 141 ALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNV----KISDLGLFREVY 196
Query: 1199 ----SKIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPY 1253
K+ N+L+ + WMAPE + K S D++S+G+VLWE+ + G +PY
Sbjct: 197 AADYYKLLGNSLLP------IRWMAPEAI--MYGKFSIDSDIWSYGVVLWEVFSYGLQPY 248
Query: 1254 ANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ I N + P P C + LM +CW P RP F +I RLR
Sbjct: 249 CGYSNQDVVEMIRNRQVLP-CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 137/281 (48%), Gaps = 29/281 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K L SG FGTVY G W VAIK ++++ T + +E
Sbjct: 14 ALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 71
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ + + M G L + + ++
Sbjct: 72 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGS 123
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFGL+K+ ++
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGLAKLLGAEEK 179
Query: 1204 NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAII 1262
GG + + WMA E + + + DV+S+G+ +WE++T G +PY + + I
Sbjct: 180 EYHAEGG-KVPIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEI 235
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I+ R P P C + ++M +CW D RP F E+
Sbjct: 236 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 130/303 (42%), Gaps = 47/303 (15%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K S E+ + E E+
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-------SDATEKDLSDLISEMEM 127
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 128 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 184
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E L + + A A GMEYL SK +H DL N+LV + + K+ DFGL++
Sbjct: 185 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARD 240
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG++LWEI T G PY +
Sbjct: 241 IHHIDYYKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 298
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAACQTK 1317
+ ++ R P C +E ++M CW P RP+F ++ L + A +
Sbjct: 299 VEELF-KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 357
Query: 1318 SHG 1320
G
Sbjct: 358 EMG 360
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 137/281 (48%), Gaps = 29/281 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 66
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ + + M G L + + ++
Sbjct: 67 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGS 118
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFG +K+ ++
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGRAKLLGAEEK 174
Query: 1204 NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAII 1262
GG + + WMA E + + + DV+S+G+ +WE++T G +PY + + I
Sbjct: 175 EYHAEGG-KVPIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEI 230
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I+ R P P C + ++M +CW D RP F E+
Sbjct: 231 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 271
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 126/287 (43%), Gaps = 41/287 (14%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG V G D VA+K +K+ G + + R + E +IL
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMS---ELKILI 76
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKER---------------H 1144
+ HH NVV G PGG L +TEF G+L L SK
Sbjct: 77 HIGHHLNVVNLLGACTK-PGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKR 1203
L + + A GME+L S+ +H DL N+L++ K+ + K+ DFGL++ I +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN----VVKICDFGLARDIYK 191
Query: 1204 --NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGA 1260
+ + G R L WMAPE + + DV+SFG++LWEI + G PY +
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPYPGVKIDE 249
Query: 1261 IIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ R P + E M CW +P RP+F+E+ L
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 139/282 (49%), Gaps = 31/282 (10%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHGKW------RGTDVAIKRIKKSCFTGRSSEQER 1087
+ L+I+K + +++K LGSG FGTVY G W VAIK ++++ T + +E
Sbjct: 11 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEI 68
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR 1147
L EA +++ + +P+V G+ T+ + + M G L + + ++
Sbjct: 69 LD-----EAYVMASVDNPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGS 120
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KR 1203
+ L + A GM YL + +VH DL N+LV + K+ DFG +K+ ++
Sbjct: 121 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV----KITDFGRAKLLGAEEK 176
Query: 1204 NTLVTGGVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAI 1261
GG + + WMA E +L+ + S DV+S+G+ +WE++T G +PY + +
Sbjct: 177 EYHAEGG-KVPIKWMALESILHRIYTHQS---DVWSYGVTVWELMTFGSKPYDGIP-ASE 231
Query: 1262 IGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I I+ R P P C + ++M +CW D RP F E+
Sbjct: 232 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 273
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 126/287 (43%), Gaps = 41/287 (14%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG V G D VA+K +K+ G + + R + E +IL
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMS---ELKILI 76
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKER---------------H 1144
+ HH NVV G PGG L +TEF G+L L SK
Sbjct: 77 HIGHHLNVVNLLGACTK-PGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKR 1203
L + + A GME+L S+ +H DL N+L++ K+ + K+ DFGL++ I +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN----VVKICDFGLARDIYK 191
Query: 1204 --NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGA 1260
+ + G R L WMAPE + + DV+SFG++LWEI + G PY +
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPYPGVKIDE 249
Query: 1261 IIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ R P + E M CW +P RP+F+E+ L
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 132/295 (44%), Gaps = 56/295 (18%)
Query: 1047 LKELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
++ELG FG VY G G VAIK +K + L EF EA +
Sbjct: 14 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-------DKAEGPLREEFRHEAMLR 66
Query: 1100 SKLHHPNVVAFYGVV-QDGPGGTLATVTEFMVNGSLRHVLLSKERH-------------- 1144
++L HPNVV GVV +D P L+ + + +G L L+ + H
Sbjct: 67 ARLQHPNVVCLLGVVTKDQP---LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 1145 -LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL----- 1198
L+ + + A GMEYL S ++VH DL N+LV K + K+ D GL
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNV----KISDLGLFREVY 179
Query: 1199 ----SKIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPY 1253
K+ N+L+ + WMAPE + K S D++S+G+VLWE+ + G +PY
Sbjct: 180 AADYYKLLGNSLLP------IRWMAPEAI--MYGKFSIDSDIWSYGVVLWEVFSYGLQPY 231
Query: 1254 ANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLR 1308
++ I N + P P C + LM +CW P RP F +I RLR
Sbjct: 232 CGYSNQDVVEMIRNRQVLP-CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 105/206 (50%), Gaps = 18/206 (8%)
Query: 1049 ELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVV 1108
++G G FG VY G T VA+K++ E L +F +E ++++K H N+V
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMV----DITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 1109 AFYGVVQDGPGGTLATVTEFMVNGSL--RHVLLSKERHLDRRKRLIIAMDAAFGMEYLHS 1166
G DG L V +M NGSL R L L R IA AA G+ +LH
Sbjct: 94 ELLGFSSDGDD--LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151
Query: 1167 KNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN---TLVTGGVRGTLPWMAPELL 1223
+ +H D+K N+L++ K+ DFGL++ T++ + GT +MAPE L
Sbjct: 152 NHHIHRDIKSANILLDEA----FTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL 207
Query: 1224 NGSSSKVSEKVDVFSFGIVLWEILTG 1249
G +++ K D++SFG+VL EI+TG
Sbjct: 208 RG---EITPKSDIYSFGVVLLEIITG 230
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
Length = 317
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 126/290 (43%), Gaps = 47/290 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K S E+ + E E+
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-------SDATEKDLSDLISEMEM 86
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSKE-------------- 1142
+ + H N++ G QDGP L + E+ G+LR L ++E
Sbjct: 87 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNP 143
Query: 1143 -RHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
L + + A A GMEYL SK +H DL N+LV + + K+ DFGL++
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARD 199
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG++LWEI T G PY +
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ R P C +E ++M CW P RP+F ++ L
Sbjct: 258 VEELF-KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 126/290 (43%), Gaps = 47/290 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K S E+ + E E+
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-------SDATEKDLSDLISEMEM 78
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 79 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 135
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E L + + A A GMEYL SK +H DL N+LV + + K+ DFGL++
Sbjct: 136 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARD 191
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG++LWEI T G PY +
Sbjct: 192 IHHIDYYKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 249
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ R P C +E ++M CW P RP+F ++ L
Sbjct: 250 VEELF-KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 298
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 126/290 (43%), Gaps = 47/290 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K S E+ + E E+
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-------SDATEKDLSDLISEMEM 86
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 87 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 143
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E L + + A A GMEYL SK +H DL N+LV + + K+ DFGL++
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARD 199
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG++LWEI T G PY +
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ R P C +E ++M CW P RP+F ++ L
Sbjct: 258 VEELF-KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 126/290 (43%), Gaps = 47/290 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K S E+ + E E+
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-------SDATEKDLSDLISEMEM 79
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 80 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 136
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E L + + A A GMEYL SK +H DL N+LV + + K+ DFGL++
Sbjct: 137 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARD 192
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG++LWEI T G PY +
Sbjct: 193 IHHIDYYKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 250
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ R P C +E ++M CW P RP+F ++ L
Sbjct: 251 VEELF-KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 299
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
Length = 306
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 126/290 (43%), Gaps = 47/290 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K S E+ + E E+
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-------SDATEKDLSDLISEMEM 75
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 76 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 132
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E L + + A A GMEYL SK +H DL N+LV + + K+ DFGL++
Sbjct: 133 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARD 188
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG++LWEI T G PY +
Sbjct: 189 IHHIDYYKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 246
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ R P C +E ++M CW P RP+F ++ L
Sbjct: 247 VEELF-KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 295
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 125/283 (44%), Gaps = 37/283 (13%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG V G D VA+K +K+ G + + R + E +IL
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKE----GATHSEHRALMS---ELKILI 85
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI------- 1152
+ HH NVV G PGG L + EF G+L L SK K L
Sbjct: 86 HIGHHLNVVNLLGACTK-PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLE 144
Query: 1153 ----IAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRN--T 1205
+ A GME+L S+ +H DL N+L++ K+ + K+ DFGL++ I ++
Sbjct: 145 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKN----VVKIXDFGLARDIYKDPDY 200
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGG 1264
+ G R L WMAPE + + DV+SFG++LWEI + G PY +
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPYPGVKIDEEFXR 258
Query: 1265 IVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ R P + E M CW +P RP+F+E+ L
Sbjct: 259 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 125/286 (43%), Gaps = 40/286 (13%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG V G D VA+K +K+ G + + R + E +IL
Sbjct: 34 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMS---ELKILI 86
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKER--------------HL 1145
+ HH NVV G PGG L + EF G+L L SK L
Sbjct: 87 HIGHHLNVVNLLGACTK-PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFL 145
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKR- 1203
+ + A GME+L S+ +H DL N+L++ K+ + K+ DFGL++ I +
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN----VVKICDFGLARDIXKD 201
Query: 1204 -NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAI 1261
+ + G R L WMAPE + + DV+SFG++LWEI + G PY +
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPYPGVKIDEE 259
Query: 1262 IGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ R P + E M CW +P RP+F+E+ L
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 105/206 (50%), Gaps = 18/206 (8%)
Query: 1049 ELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVV 1108
++G G FG VY G T VA+K++ E L +F +E ++++K H N+V
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMV----DITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 1109 AFYGVVQDGPGGTLATVTEFMVNGSL--RHVLLSKERHLDRRKRLIIAMDAAFGMEYLHS 1166
G DG L V +M NGSL R L L R IA AA G+ +LH
Sbjct: 94 ELLGFSSDGDD--LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151
Query: 1167 KNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN---TLVTGGVRGTLPWMAPELL 1223
+ +H D+K N+L++ K+ DFGL++ T++ + GT +MAPE L
Sbjct: 152 NHHIHRDIKSANILLDEA----FTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL 207
Query: 1224 NGSSSKVSEKVDVFSFGIVLWEILTG 1249
G +++ K D++SFG+VL EI+TG
Sbjct: 208 RG---EITPKSDIYSFGVVLLEIITG 230
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 125/285 (43%), Gaps = 39/285 (13%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG V G D VA+K +K+ G + + R + E +IL
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKE----GATHSEHRALMS---ELKILI 87
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKER-------------HLD 1146
+ HH NVV G PGG L + EF G+L L SK L
Sbjct: 88 HIGHHLNVVNLLGACTK-PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLT 146
Query: 1147 RRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKR-- 1203
+ + A GME+L S+ +H DL N+L++ K+ + K+ DFGL++ I +
Sbjct: 147 LEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKN----VVKICDFGLARDIXKDP 202
Query: 1204 NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAII 1262
+ + G R L WMAPE + + DV+SFG++LWEI + G PY +
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ R P + E M CW +P RP+F+E+ L
Sbjct: 261 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 125/283 (44%), Gaps = 37/283 (13%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG V G D VA+K +K+ G + + R + E +IL
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKE----GATHSEHRALMS---ELKILI 85
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRL-------- 1151
+ HH NVV G PGG L + EF G+L L SK K L
Sbjct: 86 HIGHHLNVVNLLGACTK-PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLE 144
Query: 1152 ---IIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKR--NT 1205
+ A GME+L S+ +H DL N+L++ K+ + K+ DFGL++ I + +
Sbjct: 145 HLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKN----VVKICDFGLARDIYKDPDY 200
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGG 1264
+ G R L WMAPE + + DV+SFG++LWEI + G PY +
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 258
Query: 1265 IVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ R P + E M CW +P RP+F+E+ L
Sbjct: 259 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Tyrosine- Protein Kinase Mer In Complex With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Tyrosine- Protein Kinase Mer In Complex With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 128/277 (46%), Gaps = 30/277 (10%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-----VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
K LG G FG+V G + D VA+K +K + R E EF EA +
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIE------EFLSEAACMKDF 93
Query: 1103 HHPNVVAFYGVVQDGPGGTL---ATVTEFMVNGSLRHVLL-----SKERHLDRRKRLIIA 1154
HPNV+ GV + + + FM G L LL + +H+ + L
Sbjct: 94 SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFM 153
Query: 1155 MDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLVTGGVRG 1213
+D A GMEYL ++N +H DL N + L+D + +C V DFGLS KI G
Sbjct: 154 VDIALGMEYLSNRNFLHRDLAARNCM--LRDDM-TVC-VADFGLSKKIYSGDYYRQGRIA 209
Query: 1214 TLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNTL 1270
+P W+A E L + + K DV++FG+ +WEI T G PY + + +++
Sbjct: 210 KMPVKWIAIESL--ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH- 266
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P C E +M CW DP+ RP+F+ + +L
Sbjct: 267 RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQL 303
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 126/290 (43%), Gaps = 47/290 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K S E+ + E E+
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-------SDATEKDLSDLISEMEM 86
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 87 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNP 143
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E L + + A A GMEYL SK +H DL N+LV + + K+ DFGL++
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARD 199
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG++LWEI T G PY +
Sbjct: 200 IHHIDXXKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ R P C +E ++M CW P RP+F ++ L
Sbjct: 258 VEELF-KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 126/290 (43%), Gaps = 47/290 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K S E+ + E E+
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-------SDATEKDLSDLISEMEM 86
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 87 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 143
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E L + + A A GMEYL SK +H DL N+LV + + K+ DFGL++
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARD 199
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG++LWEI T G PY +
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ R P C +E ++M CW P RP+F ++ L
Sbjct: 258 VEELF-KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 126/290 (43%), Gaps = 47/290 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K S E+ + E E+
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-------SDATEKDLSDLISEMEM 71
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 72 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 128
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E L + + A A GMEYL SK +H DL N+LV + + K+ DFGL++
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARD 184
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG++LWEI T G PY +
Sbjct: 185 IHHIDYYKKTTNGRLPVKWMAPEAL--FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 242
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ R P C +E ++M CW P RP+F ++ L
Sbjct: 243 VEELF-KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 125/287 (43%), Gaps = 41/287 (14%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG V G D VA+K +K+ G + + R + E +IL
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMS---ELKILI 85
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKER---------------H 1144
+ HH NVV G PGG L + EF G+L L SK
Sbjct: 86 HIGHHLNVVNLLGACTK-PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKR 1203
L + + A GME+L S+ +H DL N+L++ K+ + K+ DFGL++ I +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN----VVKICDFGLARDIXK 200
Query: 1204 --NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGA 1260
+ + G R L WMAPE + + DV+SFG++LWEI + G PY +
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPYPGVKIDE 258
Query: 1261 IIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ R P + E M CW +P RP+F+E+ L
Sbjct: 259 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 125/287 (43%), Gaps = 41/287 (14%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG V G D VA+K +K+ G + + R + E +IL
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMS---ELKILI 76
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKER---------------H 1144
+ HH NVV G PGG L + EF G+L L SK
Sbjct: 77 HIGHHLNVVNLLGACTK-PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKR 1203
L + + A GME+L S+ +H DL N+L++ K+ + K+ DFGL++ I +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN----VVKICDFGLARDIXK 191
Query: 1204 --NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGA 1260
+ + G R L WMAPE + + DV+SFG++LWEI + G PY +
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPYPGVKIDE 249
Query: 1261 IIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ R P + E M CW +P RP+F+E+ L
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 125/287 (43%), Gaps = 41/287 (14%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG V G D VA+K +K+ G + + R + E +IL
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMS---ELKILI 87
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKER---------------H 1144
+ HH NVV G PGG L + EF G+L L SK
Sbjct: 88 HIGHHLNVVNLLGACTK-PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDF 146
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKR 1203
L + + A GME+L S+ +H DL N+L++ K+ + K+ DFGL++ I +
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN----VVKICDFGLARDIYK 202
Query: 1204 --NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGA 1260
+ + G R L WMAPE + + DV+SFG++LWEI + G PY +
Sbjct: 203 DPDYVRKGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPYPGVKIDE 260
Query: 1261 IIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ R P + E M CW +P RP+F+E+ L
Sbjct: 261 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 125/287 (43%), Gaps = 41/287 (14%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG V G D VA+K +K+ G + + R + E +IL
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMS---ELKILI 85
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKER---------------H 1144
+ HH NVV G PGG L + EF G+L L SK
Sbjct: 86 HIGHHLNVVNLLGACTK-PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKR 1203
L + + A GME+L S+ +H DL N+L++ K+ + K+ DFGL++ I +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN----VVKICDFGLARDIYK 200
Query: 1204 --NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGA 1260
+ + G R L WMAPE + + DV+SFG++LWEI + G PY +
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPYPGVKIDE 258
Query: 1261 IIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ R P + E M CW +P RP+F+E+ L
Sbjct: 259 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 125/287 (43%), Gaps = 41/287 (14%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG V G D VA+K +K+ G + + R + E +IL
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMS---ELKILI 85
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKER---------------H 1144
+ HH NVV G PGG L + EF G+L L SK
Sbjct: 86 HIGHHLNVVNLLGACTK-PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKR 1203
L + + A GME+L S+ +H DL N+L++ K+ + K+ DFGL++ I +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN----VVKICDFGLARDIYK 200
Query: 1204 --NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGA 1260
+ + G R L WMAPE + + DV+SFG++LWEI + G PY +
Sbjct: 201 DPDYVRKGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPYPGVKIDE 258
Query: 1261 IIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ R P + E M CW +P RP+F+E+ L
Sbjct: 259 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 125/287 (43%), Gaps = 41/287 (14%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG V G D VA+K +K+ G + + R + E +IL
Sbjct: 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMS---ELKILI 122
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKER---------------H 1144
+ HH NVV G PGG L + EF G+L L SK
Sbjct: 123 HIGHHLNVVNLLGACTK-PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 181
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKR 1203
L + + A GME+L S+ +H DL N+L++ K+ + K+ DFGL++ I +
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN----VVKICDFGLARDIYK 237
Query: 1204 --NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGA 1260
+ + G R L WMAPE + + DV+SFG++LWEI + G PY +
Sbjct: 238 DPDYVRKGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPYPGVKIDE 295
Query: 1261 IIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ R P + E M CW +P RP+F+E+ L
Sbjct: 296 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant
Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 150/321 (46%), Gaps = 43/321 (13%)
Query: 1014 LDLPTAGIPLVDLA-LGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWR-GTDVAIK 1071
D+P P V L L F + LQ+ +++ LG G FG VY G+ G VA+K
Sbjct: 2 FDVPAEEDPEVHLGQLKRFSLRELQV-ASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK 60
Query: 1072 RIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVN 1131
R+K+ G L+F E E++S H N++ G P L V +M N
Sbjct: 61 RLKEERTQGGE-------LQFQTEVEMISMAVHRNLLRLRGFCMT-PTERL-LVYPYMAN 111
Query: 1132 GSLRHVLLSKERH---LDRRKRLIIAMDAAFGMEYLHSK---NIVHFDLKCDNLLVNLKD 1185
GS+ L + LD KR IA+ +A G+ YLH I+H D+K N+L L +
Sbjct: 112 GSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANIL--LDE 169
Query: 1186 PIRPICKVGDFGLSKIK--RNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVL 1243
+ VGDFGL+K+ ++ V VRG + +APE L S+ K SEK DVF +G++L
Sbjct: 170 EFEAV--VGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYL--STGKSSEKTDVFGYGVML 225
Query: 1244 WEILTGEEPY-----AN----MHYGAIIGGIVNNTLRPPVP-----GFCDSEWRLLME-- 1287
E++TG+ + AN M + G + L V + D E L++
Sbjct: 226 LELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVA 285
Query: 1288 -QCWAPDPVVRPSFTEIARRL 1307
C P+ RP +E+ R L
Sbjct: 286 LLCTQSSPMERPKMSEVVRML 306
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 104/206 (50%), Gaps = 18/206 (8%)
Query: 1049 ELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVV 1108
++G G FG VY G T VA+K++ E L +F +E ++++K H N+V
Sbjct: 32 KMGEGGFGVVYKGYVNNTTVAVKKLAAMV----DITTEELKQQFDQEIKVMAKCQHENLV 87
Query: 1109 AFYGVVQDGPGGTLATVTEFMVNGSL--RHVLLSKERHLDRRKRLIIAMDAAFGMEYLHS 1166
G DG L V +M NGSL R L L R IA AA G+ +LH
Sbjct: 88 ELLGFSSDGDD--LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 145
Query: 1167 KNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN---TLVTGGVRGTLPWMAPELL 1223
+ +H D+K N+L++ K+ DFGL++ ++ + GT +MAPE L
Sbjct: 146 NHHIHRDIKSANILLDEA----FTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL 201
Query: 1224 NGSSSKVSEKVDVFSFGIVLWEILTG 1249
G +++ K D++SFG+VL EI+TG
Sbjct: 202 RG---EITPKSDIYSFGVVLLEIITG 224
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 113/216 (52%), Gaps = 14/216 (6%)
Query: 1046 ELKELGSGTFGTVYHGKWRG--TDVAIKRIKKSCF-TGRSSEQ----ERLTLEFWREAEI 1098
++++LGSG +G V K + ++ AIK IKKS F GR S+ E+ E + E +
Sbjct: 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISL 99
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L L HPN++ + V +D L VTEF G L ++++ + D I
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYL--VTEFYEGGELFEQIINRHK-FDECDAANIMKQIL 156
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWM 1218
G+ YLH NIVH D+K +N+L+ K+ + I K+ DFGLS GT ++
Sbjct: 157 SGICYLHKHNIVHRDIKPENILLENKNSLLNI-KIVDFGLSSFFSKDYKLRDRLGTAYYI 215
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYA 1254
APE+L K +EK DV+S G++++ +L G P+
Sbjct: 216 APEVL---KKKYNEKCDVWSCGVIMYILLCGYPPFG 248
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 135/268 (50%), Gaps = 26/268 (9%)
Query: 1050 LGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G+FG V K R T + A+K I K+ S + + T RE E+L KL HPN+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKA------SAKNKDTSTILREVELLKKLDHPNI 83
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ + +++D + V E G L ++ ++R + II + G+ Y+H
Sbjct: 84 MKLFEILEDS--SSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS-GITYMHKH 140
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRNTLVTGGVRGTLPWMAPELLNGS 1226
NIVH DLK +N+L+ K+ I K+ DFGLS ++NT + + GT ++APE+L G+
Sbjct: 141 NIVHRDLKPENILLESKEKDCDI-KIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEVLRGT 198
Query: 1227 SSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLM 1286
EK DV+S G++L+ +L+G P+ + I+ + +P +WR +
Sbjct: 199 ---YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP-----QWRTIS 250
Query: 1287 EQCWAPDPVVRPSFTEIARRLRVMSAAC 1314
+ A D ++R T LR+ + C
Sbjct: 251 DD--AKD-LIRKMLT-FHPSLRITATQC 274
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 136/305 (44%), Gaps = 66/305 (21%)
Query: 1048 KELGSGTFG-----TVYHGKWRG--TDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG T +H K R T VA+K +K++ SE L EF +L
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN---ASPSELRDLLSEF----NVLK 81
Query: 1101 KLHHPNVVAFYGVV-QDGPGGTLATVTEFMVNGSLRHVLLSK------------------ 1141
+++HP+V+ YG QDGP L + E+ GSLR L
Sbjct: 82 QVNHPHVIKLYGACSQDGP---LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 1142 -----ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDF 1196
ER L + A + GM+YL ++VH DL N+LV + K+ DF
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKM----KISDF 194
Query: 1197 GLSK--------IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEI 1246
GLS+ +KR+ +G +P WMA E L + + DV+SFG++LWEI
Sbjct: 195 GLSRDVYEEDSXVKRS-------QGRIPVKWMAIESL--FDHIYTTQSDVWSFGVLLWEI 245
Query: 1247 LT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
+T G PY + + ++ R P C E LM QCW +P RP F +I++
Sbjct: 246 VTLGGNPYPGIPPERLFN-LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 1306 RLRVM 1310
L M
Sbjct: 305 DLEKM 309
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
Length = 314
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 135/305 (44%), Gaps = 66/305 (21%)
Query: 1048 KELGSGTFG-----TVYHGKWRG--TDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG T +H K R T VA+K +K++ SE L EF +L
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN---ASPSELRDLLSEF----NVLK 81
Query: 1101 KLHHPNVVAFYGVV-QDGPGGTLATVTEFMVNGSLRHVLLSK------------------ 1141
+++HP+V+ YG QDGP L + E+ GSLR L
Sbjct: 82 QVNHPHVIKLYGACSQDGP---LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 1142 -----ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDF 1196
ER L + A + GM+YL +VH DL N+LV + K+ DF
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKM----KISDF 194
Query: 1197 GLSK--------IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEI 1246
GLS+ +KR+ +G +P WMA E L + + DV+SFG++LWEI
Sbjct: 195 GLSRDVYEEDSYVKRS-------QGRIPVKWMAIESL--FDHIYTTQSDVWSFGVLLWEI 245
Query: 1247 LT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
+T G PY + + ++ R P C E LM QCW +P RP F +I++
Sbjct: 246 VTLGGNPYPGIPPERLFN-LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 1306 RLRVM 1310
L M
Sbjct: 305 DLEKM 309
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 135/305 (44%), Gaps = 66/305 (21%)
Query: 1048 KELGSGTFG-----TVYHGKWRG--TDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG T +H K R T VA+K +K++ SE L EF +L
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN---ASPSELRDLLSEF----NVLK 81
Query: 1101 KLHHPNVVAFYGVV-QDGPGGTLATVTEFMVNGSLRHVLLSK------------------ 1141
+++HP+V+ YG QDGP L + E+ GSLR L
Sbjct: 82 QVNHPHVIKLYGACSQDGP---LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 1142 -----ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDF 1196
ER L + A + GM+YL +VH DL N+LV + K+ DF
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKM----KISDF 194
Query: 1197 GLSK--------IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEI 1246
GLS+ +KR+ +G +P WMA E L + + DV+SFG++LWEI
Sbjct: 195 GLSRDVYEEDSXVKRS-------QGRIPVKWMAIESL--FDHIYTTQSDVWSFGVLLWEI 245
Query: 1247 LT-GEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
+T G PY + + ++ R P C E LM QCW +P RP F +I++
Sbjct: 246 VTLGGNPYPGIPPERLFN-LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 1306 RLRVM 1310
L M
Sbjct: 305 DLEKM 309
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 129/290 (44%), Gaps = 46/290 (15%)
Query: 1048 KELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG+G FG V G VA+K +K S +E+E L E ++LS
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS---AHLTEREALM----SELKVLS 104
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAM---- 1155
L +H N+V G G G TL +TE+ G L + L K K M
Sbjct: 105 YLGNHMNIVNLLGACTIG-GPTL-VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 162
Query: 1156 -------------DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
A GM +L SKN +H DL N+L+ I K+ DFGL++ I
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR----ITKICDFGLARDI 218
Query: 1202 KR--NTLVTGGVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
K N +V G R + WMAPE + N + S DV+S+GI LWE+ + G PY M
Sbjct: 219 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFES---DVWSYGIFLWELFSLGSSPYPGMP 275
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ R P +E +M+ CW DP+ RP+F +I + +
Sbjct: 276 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 97.4 bits (241), Expect = 5e-20, Method: Composition-based stats.
Identities = 89/285 (31%), Positives = 134/285 (47%), Gaps = 41/285 (14%)
Query: 1044 LEELKELGSGTFGTV----YHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+++++LG G FG V Y GT VA+K +K+ C +L + RE E
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGC-------GPQLRSGWQREIE 62
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAMD 1156
IL L+H ++V + G +D ++ V E++ GSLR L RH + + L+ A
Sbjct: 63 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQ 119
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR--GT 1214
GM YLH+++ +H L N+L+ D R + K+GDFGL+K VR G
Sbjct: 120 ICEGMAYLHAQHYIHRALAARNVLL---DNDR-LVKIGDFGLAKAVPEGHEYYRVREDGD 175
Query: 1215 LP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMH--YGAIIGG------ 1264
P W APE L K DV+SFG+ L+E+LT + + H + +IG
Sbjct: 176 SPVFWYAPECLK--ECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMT 233
Query: 1265 ------IVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
++ R P P C E LM+ CW + RP+F +
Sbjct: 234 VLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNL 278
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 129/290 (44%), Gaps = 46/290 (15%)
Query: 1048 KELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG+G FG V G VA+K +K S +E+E L E ++LS
Sbjct: 45 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS---AHLTEREALM----SELKVLS 97
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAM---- 1155
L +H N+V G G G TL +TE+ G L + L K K M
Sbjct: 98 YLGNHMNIVNLLGACTIG-GPTL-VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 155
Query: 1156 -------------DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
A GM +L SKN +H DL N+L+ I K+ DFGL++ I
Sbjct: 156 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR----ITKICDFGLARDI 211
Query: 1202 KR--NTLVTGGVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
K N +V G R + WMAPE + N + S DV+S+GI LWE+ + G PY M
Sbjct: 212 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFES---DVWSYGIFLWELFSLGSSPYPGMP 268
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ R P +E +M+ CW DP+ RP+F +I + +
Sbjct: 269 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 318
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 97.4 bits (241), Expect = 5e-20, Method: Composition-based stats.
Identities = 89/285 (31%), Positives = 134/285 (47%), Gaps = 41/285 (14%)
Query: 1044 LEELKELGSGTFGTV----YHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
L+++++LG G FG V Y GT VA+K +K+ C +L + RE E
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGC-------GPQLRSGWQREIE 63
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAMD 1156
IL L+H ++V + G +D ++ V E++ GSLR L RH + + L+ A
Sbjct: 64 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQ 120
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR--GT 1214
GM YLH+++ +H L N+L+ D R + K+GDFGL+K VR G
Sbjct: 121 ICEGMAYLHAQHYIHRALAARNVLL---DNDR-LVKIGDFGLAKAVPEGHEYYRVREDGD 176
Query: 1215 LP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMH--YGAIIGG------ 1264
P W APE L K DV+SFG+ L+E+LT + + H + +IG
Sbjct: 177 SPVFWYAPECLK--ECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMT 234
Query: 1265 ------IVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
++ R P P C E LM+ CW + RP+F +
Sbjct: 235 VLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNL 279
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 129/290 (44%), Gaps = 46/290 (15%)
Query: 1048 KELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG+G FG V G VA+K +K S +E+E L E ++LS
Sbjct: 47 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS---AHLTEREALM----SELKVLS 99
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAM---- 1155
L +H N+V G G G TL +TE+ G L + L K K M
Sbjct: 100 YLGNHMNIVNLLGACTIG-GPTL-VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 157
Query: 1156 -------------DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
A GM +L SKN +H DL N+L+ I K+ DFGL++ I
Sbjct: 158 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR----ITKICDFGLARDI 213
Query: 1202 KR--NTLVTGGVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
K N +V G R + WMAPE + N + S DV+S+GI LWE+ + G PY M
Sbjct: 214 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFES---DVWSYGIFLWELFSLGSSPYPGMP 270
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ R P +E +M+ CW DP+ RP+F +I + +
Sbjct: 271 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 320
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 129/290 (44%), Gaps = 46/290 (15%)
Query: 1048 KELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG+G FG V G VA+K +K S +E+E L E ++LS
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS---AHLTEREALM----SELKVLS 104
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAM---- 1155
L +H N+V G G G TL +TE+ G L + L K K M
Sbjct: 105 YLGNHMNIVNLLGACTIG-GPTL-VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 162
Query: 1156 -------------DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
A GM +L SKN +H DL N+L+ I K+ DFGL++ I
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR----ITKICDFGLARHI 218
Query: 1202 KR--NTLVTGGVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
K N +V G R + WMAPE + N + S DV+S+GI LWE+ + G PY M
Sbjct: 219 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFES---DVWSYGIFLWELFSLGSSPYPGMP 275
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ R P +E +M+ CW DP+ RP+F +I + +
Sbjct: 276 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 129/290 (44%), Gaps = 46/290 (15%)
Query: 1048 KELGSGTFGTVYHGKWRG-------TDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG+G FG V G VA+K +K S +E+E L E ++LS
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS---AHLTEREALM----SELKVLS 81
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAM---- 1155
L +H N+V G G G TL +TE+ G L + L K K M
Sbjct: 82 YLGNHMNIVNLLGACTIG-GPTL-VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 1156 -------------DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-I 1201
A GM +L SKN +H DL N+L+ I K+ DFGL++ I
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR----ITKICDFGLARDI 195
Query: 1202 KR--NTLVTGGVRGTLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
K N +V G R + WMAPE + N + S DV+S+GI LWE+ + G PY M
Sbjct: 196 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFES---DVWSYGIFLWELFSLGSSPYPGMP 252
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ ++ R P +E +M+ CW DP+ RP+F +I + +
Sbjct: 253 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 131/295 (44%), Gaps = 48/295 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K + +E L+ + E E+
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD------ATEEDLS-DLVSEMEM 93
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E + + + A GMEYL S+ +H DL N+LV + + K+ DFGL++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARD 206
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG+++WEI T G PY +
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL-RVMS 1311
+ ++ R P C +E ++M CW P RP+F ++ L R+++
Sbjct: 265 VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 96.7 bits (239), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 128/295 (43%), Gaps = 48/295 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K E+ + E E+
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------DDATEKDLSDLVSEMEM 93
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 94 MKMIGKHKNIITLLGACTQDGP---LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E + + + A GMEYL S+ +H DL N+LV + + K+ DFGL++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARD 206
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG+++WEI T G PY +
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL-RVMS 1311
+ ++ R P C +E ++M CW P RP+F ++ L R+++
Sbjct: 265 VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 128/295 (43%), Gaps = 48/295 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K E+ + E E+
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------DDATEKDLSDLVSEMEM 93
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E + + + A GMEYL S+ +H DL N+LV + + K+ DFGL++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARD 206
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG+++WEI T G PY +
Sbjct: 207 INNIDYYKNTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL-RVMS 1311
+ ++ R P C +E ++M CW P RP+F ++ L R+++
Sbjct: 265 VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 34/269 (12%)
Query: 1047 LKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
LK +G G F V + G +VAIK I K+ S ++ +RE I+ L+H
Sbjct: 17 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK------LFREVRIMKILNH 70
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLS----KERHLDRRKRLIIAMDAAFG 1160
PN+V + V++ TL + E+ G + L++ KE+ + R I++
Sbjct: 71 PNIVKLFEVIETEK--TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS-----A 123
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTL----P 1216
++Y H K IVH DLK +NLL++ I K+ DFG S N GG T P
Sbjct: 124 VQYCHQKRIVHRDLKAENLLLDADMNI----KIADFGFS----NEFTVGGKLDTFCGSPP 175
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPG 1276
+ APEL G E VDV+S G++L+ +++G P+ + + ++ R +P
Sbjct: 176 YAAPELFQGKKYDGPE-VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPF 232
Query: 1277 FCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
+ ++ L+++ +P+ R + +I +
Sbjct: 233 YMSTDCENLLKRFLVLNPIKRGTLEQIMK 261
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 128/295 (43%), Gaps = 48/295 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K E+ + E E+
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-------TEKDLSDLVSEMEM 93
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLRARRPPGMEXSYDINRVP 150
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E + + + A GMEYL S+ +H DL N+LV + + K+ DFGL++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARD 206
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG+++WEI T G PY +
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL-RVMS 1311
+ ++ R P C +E ++M CW P RP+F ++ L R+++
Sbjct: 265 VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 128/295 (43%), Gaps = 48/295 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K E+ + E E+
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-------TEKDLSDLVSEMEM 93
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E + + + A GMEYL S+ +H DL N+LV + + K+ DFGL++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARD 206
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG+++WEI T G PY +
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL-RVMS 1311
+ ++ R P C +E ++M CW P RP+F ++ L R+++
Sbjct: 265 VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 128/295 (43%), Gaps = 48/295 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K E+ + E E+
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------DDATEKDLSDLVSEMEM 93
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 94 MKMIGKHKNIIHLLGACTQDGP---LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E + + + A GMEYL S+ +H DL N+LV + + K+ DFGL++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARD 206
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG+++WEI T G PY +
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL-RVMS 1311
+ ++ R P C +E ++M CW P RP+F ++ L R+++
Sbjct: 265 VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 139/307 (45%), Gaps = 43/307 (14%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKWRGTD------VAIKRIKKSCFTGRSSEQERLTLE 1091
+ L+++++LG G FG V + T+ VA+K +K + Q R
Sbjct: 27 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-----AGPQHR---S 78
Query: 1092 FWR-EAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRK 1149
W+ E +IL L+H +++ + G +D +L V E++ GSLR L RH + +
Sbjct: 79 GWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQ 135
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
L+ A GM YLH+++ +H DL N+L++ + K+GDFGL+K
Sbjct: 136 LLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDR----LVKIGDFGLAKAVPEGHEXY 191
Query: 1210 GVR--GTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEE-----PYANMHYGA 1260
VR G P W APE L K DV+SFG+ L+E+LT + P +
Sbjct: 192 RVREDGDSPVFWYAPECLK--EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG 249
Query: 1261 IIGG---------IVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMS 1311
I G ++ R P P C +E LM+ CW + RP+F + L+ +
Sbjct: 250 IAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309
Query: 1312 AACQTKS 1318
Q ++
Sbjct: 310 EKYQGQA 316
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 128/295 (43%), Gaps = 48/295 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K E+ + E E+
Sbjct: 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------DDATEKDLSDLVSEMEM 139
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 140 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E + + + A GMEYL S+ +H DL N+LV + + K+ DFGL++
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARD 252
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG+++WEI T G PY +
Sbjct: 253 INNIDYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 310
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL-RVMS 1311
+ ++ R P C +E ++M CW P RP+F ++ L R+++
Sbjct: 311 VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 128/295 (43%), Gaps = 48/295 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K E+ + E E+
Sbjct: 33 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------DDATEKDLSDLVSEMEM 85
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 86 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 142
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E + + + A GMEYL S+ +H DL N+LV + + K+ DFGL++
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARD 198
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG+++WEI T G PY +
Sbjct: 199 INNIDYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 256
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL-RVMS 1311
+ ++ R P C +E ++M CW P RP+F ++ L R+++
Sbjct: 257 VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 310
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
Length = 313
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 128/295 (43%), Gaps = 48/295 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K E+ + E E+
Sbjct: 30 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------DDATEKDLSDLVSEMEM 82
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 83 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 139
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E + + + A GMEYL S+ +H DL N+LV + + K+ DFGL++
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARD 195
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG+++WEI T G PY +
Sbjct: 196 INNIDYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 253
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL-RVMS 1311
+ ++ R P C +E ++M CW P RP+F ++ L R+++
Sbjct: 254 VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 307
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 128/295 (43%), Gaps = 48/295 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K E+ + E E+
Sbjct: 28 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------DDATEKDLSDLVSEMEM 80
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 81 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 137
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E + + + A GMEYL S+ +H DL N+LV + + K+ DFGL++
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENN----VMKIADFGLARD 193
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG+++WEI T G PY +
Sbjct: 194 INNIDYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 251
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL-RVMS 1311
+ ++ R P C +E ++M CW P RP+F ++ L R+++
Sbjct: 252 VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 305
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 113/207 (54%), Gaps = 17/207 (8%)
Query: 1050 LGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G+FG V K R T + A+K I K+ S + + T RE E+L KL HPN+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKA------SAKNKDTSTILREVELLKKLDHPNI 83
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ + +++D + V E G L ++ ++R + II + G+ Y+H
Sbjct: 84 MKLFEILEDS--SSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS-GITYMHKH 140
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRNTLVTGGVRGTLPWMAPELLNGS 1226
NIVH DLK +N+L+ K+ I K+ DFGLS ++NT + + GT ++APE+L G+
Sbjct: 141 NIVHRDLKPENILLESKEKDCDI-KIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEVLRGT 198
Query: 1227 SSKVSEKVDVFSFGIVLWEILTGEEPY 1253
EK DV+S G++L+ +L+G P+
Sbjct: 199 ---YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 113/207 (54%), Gaps = 17/207 (8%)
Query: 1050 LGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G+FG V K R T + A+K I K+ S + + T RE E+L KL HPN+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKA------SAKNKDTSTILREVELLKKLDHPNI 83
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ + +++D + V E G L ++ ++R + II + G+ Y+H
Sbjct: 84 MKLFEILEDS--SSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS-GITYMHKH 140
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRNTLVTGGVRGTLPWMAPELLNGS 1226
NIVH DLK +N+L+ K+ I K+ DFGLS ++NT + + GT ++APE+L G+
Sbjct: 141 NIVHRDLKPENILLESKEKDCDI-KIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEVLRGT 198
Query: 1227 SSKVSEKVDVFSFGIVLWEILTGEEPY 1253
EK DV+S G++L+ +L+G P+
Sbjct: 199 ---YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 34/269 (12%)
Query: 1047 LKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
LK +G G F V + G +VAIK I K+ S ++ +RE I+ L+H
Sbjct: 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK------LFREVRIMKILNH 73
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLS----KERHLDRRKRLIIAMDAAFG 1160
PN+V + V++ TL + E+ G + L++ KE+ + R I++
Sbjct: 74 PNIVKLFEVIETEK--TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS-----A 126
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGG----VRGTLP 1216
++Y H K IVH DLK +NLL++ I K+ DFG S N GG G P
Sbjct: 127 VQYCHQKRIVHRDLKAENLLLDADMNI----KIADFGFS----NEFTVGGKLDAFCGAPP 178
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPG 1276
+ APEL G E VDV+S G++L+ +++G P+ + + ++ R +P
Sbjct: 179 YAAPELFQGKKYDGPE-VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPF 235
Query: 1277 FCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
+ ++ L+++ +P+ R + +I +
Sbjct: 236 YMSTDCENLLKRFLVLNPIKRGTLEQIMK 264
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 128/295 (43%), Gaps = 48/295 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K E+ + E E+
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------DDATEKDLSDLVSEMEM 93
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + E+ G+LR L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGP---LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E + + + A GMEYL S+ +H DL N+LV + +R + DFGL++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMR----IADFGLARD 206
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG+++WEI T G PY +
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL-RVMS 1311
+ ++ R P C +E ++M CW P RP+F ++ L R+++
Sbjct: 265 VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 88
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 145
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R TL GTL
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRTTLC-----GTL 196
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 197 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 252
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 253 DFVTEGARDLISRLLKHNPSQRPMLREV 280
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 25 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 79
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 136
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R TL GTL
Sbjct: 137 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRTTLC-----GTL 187
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 188 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 243
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 244 DFVTEGARDLISRLLKHNPSQRPMLREV 271
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 135/299 (45%), Gaps = 43/299 (14%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKWRGTD------VAIKRIKKSCFTGRSSEQERLTLE 1091
+ L+++++LG G FG V + T+ VA+K +K C Q R
Sbjct: 10 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADC-----GPQHR---S 61
Query: 1092 FWR-EAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRK 1149
W+ E +IL L+H +++ + G +D +L V E++ GSLR L RH + +
Sbjct: 62 GWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQ 118
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
L+ A GM YLHS++ +H +L N+L++ + K+GDFGL+K
Sbjct: 119 LLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDR----LVKIGDFGLAKAVPEGHEYY 174
Query: 1210 GVR--GTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEE-----PYANMHYGA 1260
VR G P W APE L K DV+SFG+ L+E+LT + P +
Sbjct: 175 RVREDGDSPVFWYAPECLK--EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG 232
Query: 1261 IIGG---------IVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
I G ++ R P P C E LM+ CW + RP+F + L+ +
Sbjct: 233 IAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 121/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 67
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G + + L K D ++ + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYL--ILEYAPRGEV-YKELQKLSKFDEQRTATYITELAN 124
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R TL GTL
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRTTLC-----GTL 175
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 176 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 231
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 127/295 (43%), Gaps = 48/295 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K E+ + E E+
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------DDATEKDLSDLVSEMEM 93
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + + G+LR L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGP---LYVIVAYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E + + + A GMEYL S+ +H DL N+LV + + K+ DFGL++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARD 206
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG+++WEI T G PY +
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL-RVMS 1311
+ ++ R P C +E ++M CW P RP+F ++ L R+++
Sbjct: 265 VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 63
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 120
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R+TL GTL
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRDTLC-----GTL 171
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 172 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 227
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 228 DFVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 88
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 145
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R+ L GTL
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRDDLC-----GTL 196
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 197 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 252
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 253 DFVTEGARDLISRLLKHNPSQRPMLREV 280
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 67
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 124
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R TL GTL
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRTTLC-----GTL 175
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 176 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 231
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 65
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 122
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R TL GTL
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRTTLC-----GTL 173
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 174 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 229
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 127/295 (43%), Gaps = 48/295 (16%)
Query: 1048 KELGSGTFGTVYHGKWRGTD---------VAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
K LG G FG V + G D VA+K +K E+ + E E+
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------DDATEKDLSDLVSEMEM 93
Query: 1099 LSKL-HHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSK--------------- 1141
+ + H N++ G QDGP L + + G+LR L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGP---LYVIVGYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK- 1200
E + + + A GMEYL S+ +H DL N+LV + + K+ DFGL++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARD 206
Query: 1201 IKRNTLVTGGVRGTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMH 1257
I G LP WMAPE L + + DV+SFG+++WEI T G PY +
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL-RVMS 1311
+ ++ R P C +E ++M CW P RP+F ++ L R+++
Sbjct: 265 VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 135/299 (45%), Gaps = 43/299 (14%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHGKWRGTD------VAIKRIKKSCFTGRSSEQERLTLE 1091
+ L+++++LG G FG V + T+ VA+K +K C Q R
Sbjct: 10 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADC-----GPQHR---S 61
Query: 1092 FWR-EAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRK 1149
W+ E +IL L+H +++ + G +D +L V E++ GSLR L RH + +
Sbjct: 62 GWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQ 118
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
L+ A GM YLH+++ +H +L N+L++ + K+GDFGL+K
Sbjct: 119 LLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDR----LVKIGDFGLAKAVPEGHEYY 174
Query: 1210 GVR--GTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEE-----PYANMHYGA 1260
VR G P W APE L K DV+SFG+ L+E+LT + P +
Sbjct: 175 RVREDGDSPVFWYAPECLK--EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG 232
Query: 1261 IIGG---------IVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
I G ++ R P P C E LM+ CW + RP+F + L+ +
Sbjct: 233 IAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 63
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 120
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R TL GTL
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSCHAPSSRRTTL-----SGTL 171
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 172 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 227
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 228 DFVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 121/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 67
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 124
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R TL GTL
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRTTLC-----GTL 175
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE + G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 176 DYLPPEXIEGRXH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 231
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPXLREV 259
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 92.8 bits (229), Expect = 1e-18, Method: Composition-based stats.
Identities = 77/232 (33%), Positives = 112/232 (48%), Gaps = 24/232 (10%)
Query: 1049 ELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVV 1108
E+G G+F TVY G T V + + SE++R F EAE L L HPN+V
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR----FKEEAEXLKGLQHPNIV 88
Query: 1109 AFYGVVQDGPGGT--LATVTEFMVNGSLRHVL----LSKERHLDRRKRLIIAMDAAFGME 1162
FY + G + VTE +G+L+ L + K + L R I+ G++
Sbjct: 89 RFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILK-----GLQ 143
Query: 1163 YLHSKN--IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAP 1220
+LH++ I+H DLKCDN+ + P + K+GD GL+ +KR + V GT + AP
Sbjct: 144 FLHTRTPPIIHRDLKCDNIFIT--GPTGSV-KIGDLGLATLKRASFAKA-VIGTPEFXAP 199
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRP 1272
E K E VDV++FG E T E PY+ A I V + ++P
Sbjct: 200 EXY---EEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKP 248
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 62
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 119
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R TL GTL
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRTTLC-----GTL 170
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 171 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 226
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 120/238 (50%), Gaps = 38/238 (15%)
Query: 1021 IPLVDL--ALGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWR-GTDVAIKRIKKSC 1077
+PLVDL A NFD L +G G FG VY G R G VA+KR
Sbjct: 29 VPLVDLEEATNNFDHKFL-------------IGHGVFGKVYKGVLRDGAKVALKR----- 70
Query: 1078 FTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHV 1137
R+ E + EF E E LS HP++V+ G + + + ++M NG+L+
Sbjct: 71 ---RTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER--NEMILIYKYMENGNLKRH 125
Query: 1138 LLSKE---RHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVG 1194
L + + +RL I + AA G+ YLH++ I+H D+K N+L L + P K+
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINIL--LDENFVP--KIT 181
Query: 1195 DFGLSKIKR---NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
DFG+SK T + V+GTL ++ PE +++EK DV+SFG+VL+E+L
Sbjct: 182 DFGISKKGTELDQTHLXXVVKGTLGYIDPEYF--IKGRLTEKSDVYSFGVVLFEVLCA 237
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 120/238 (50%), Gaps = 38/238 (15%)
Query: 1021 IPLVDL--ALGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWR-GTDVAIKRIKKSC 1077
+PLVDL A NFD L +G G FG VY G R G VA+KR
Sbjct: 29 VPLVDLEEATNNFDHKFL-------------IGHGVFGKVYKGVLRDGAKVALKR----- 70
Query: 1078 FTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHV 1137
R+ E + EF E E LS HP++V+ G + + + ++M NG+L+
Sbjct: 71 ---RTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER--NEMILIYKYMENGNLKRH 125
Query: 1138 LLSKE---RHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVG 1194
L + + +RL I + AA G+ YLH++ I+H D+K N+L L + P K+
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINIL--LDENFVP--KIT 181
Query: 1195 DFGLSKIKR---NTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
DFG+SK T + V+GTL ++ PE +++EK DV+SFG+VL+E+L
Sbjct: 182 DFGISKKGTELGQTHLXXVVKGTLGYIDPEYF--IKGRLTEKSDVYSFGVVLFEVLCA 237
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 19/264 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 67
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G + + L K D ++ + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYL--ILEYAPRGEV-YKELQKLSKFDEQRTATYITELAN 124
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
+ Y HSK ++H D+K +NLL+ + K+ DFG S + + + GTL ++
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWS-VHAPSSRRXXLXGTLDYLP 179
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
PE++ G EKVD++S G++ +E L G+ P+ Y I + + P F
Sbjct: 180 PEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVT 235
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEI 1303
R L+ + +P RP E+
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREV 259
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 109/215 (50%), Gaps = 15/215 (6%)
Query: 1041 NEDLEELKELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
+E + +K+LGSG +G V + + T V AIK I+K+ + S+ + E +
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK------LLEEVAV 89
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L L HPN++ Y +D L V E G L ++ + + + +II +
Sbjct: 90 LKLLDHPNIMKLYDFFEDKRNYYL--VMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLS 147
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWM 1218
G+ YLH NIVH DLK +NLL+ K+ + K+ DFGLS + N GT ++
Sbjct: 148 -GVTYLHKHNIVHRDLKPENLLLESKEK-DALIKIVDFGLSAVFENQKKMKERLGTAYYI 205
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
APE+L K EK DV+S G++L+ +L G P+
Sbjct: 206 APEVLR---KKYDEKCDVWSIGVILFILLAGYPPF 237
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 125/238 (52%), Gaps = 19/238 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+D + L+ LG+G+FG V+ + R G A+K +KK R + E E +L
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTN----DERLML 60
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S + HP ++ +G QD + + +++ G L +L +R + + A +
Sbjct: 61 SIVTHPFIIRMWGTFQDA--QQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY-AAEVCL 117
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
+EYLHSK+I++ DLK +N+L++ I K+ DFG +K + VT + GT ++A
Sbjct: 118 ALEYLHSKDIIYRDLKPENILLDKNGHI----KITDFGFAKYVPD--VTYXLCGTPDYIA 171
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
PE++ S+ ++ +D +SFGI+++E+L G P+ + + I+N LR P P F
Sbjct: 172 PEVV--STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP-PFF 226
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY K R +A+K + K+ E + RE EI
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 59
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 116
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R TL GTL
Sbjct: 117 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRTTLC-----GTL 167
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 168 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 223
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 224 DFVTEGARDLISRLLKHNPSQRPMLREV 251
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 119/274 (43%), Gaps = 14/274 (5%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
I + L L +L G ++ G+W+G D+ +K +K ++ R S +F E
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSR------DFNEECPR 60
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHL-DRRKRLIIAMDA 1157
L HPNV+ G Q P +T +M GSL +VL + D+ + + A+D
Sbjct: 61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDM 120
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPW 1217
A GM +LH+ + ++ V + + + + D S + G W
Sbjct: 121 ARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFS------FQSPGRMYAPAW 174
Query: 1218 MAPELLNGSSSKVSEK-VDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPG 1276
+APE L + + D++SF ++LWE++T E P+A++ I + LRP +P
Sbjct: 175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPP 234
Query: 1277 FCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
LM+ C DP RP F I L M
Sbjct: 235 GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 19/264 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 65
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 122
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
+ Y HSK ++H D+K +NLL+ + K+ DFG S + + + GTL ++
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWS-VHAPSSRRAALCGTLDYLP 177
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
PE++ G EKVD++S G++ +E L G+ P+ Y I + + P F
Sbjct: 178 PEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVT 233
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEI 1303
R L+ + +P RP E+
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREV 257
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 124/272 (45%), Gaps = 25/272 (9%)
Query: 1041 NEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
NE E + ELG G FG VY K + G A K I+ T E E ++ E EI
Sbjct: 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIE----TKSEEELE----DYIVEIEI 69
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L+ HP +V G G L + EF G++ ++L +R L + ++
Sbjct: 70 LATCDHPYIVKLLGAYYHD--GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML 127
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT-GGVRGTLPW 1217
+ +LHSK I+H DLK N+L+ L+ IR + DFG+S TL GT W
Sbjct: 128 EALNFLHSKRIIHRDLKAGNVLMTLEGDIR----LADFGVSAKNLKTLQKRDSFIGTPYW 183
Query: 1218 MAPELLNGSSSK---VSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP- 1273
MAPE++ + K K D++S GI L E+ E P+ ++ ++ I + PP
Sbjct: 184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD--PPT 241
Query: 1274 --VPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
P E+R ++ +P RPS ++
Sbjct: 242 LLTPSKWSVEFRDFLKIALDKNPETRPSAAQL 273
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 98/204 (48%), Gaps = 18/204 (8%)
Query: 1051 GSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAF 1110
G G FG VY G T VA+K++ E L +F +E ++ +K H N+V
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKLAAMV----DITTEELKQQFDQEIKVXAKCQHENLVEL 86
Query: 1111 YGVVQDGPGGTLATVTEFMVNGSL--RHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKN 1168
G DG L V + NGSL R L L R IA AA G+ +LH +
Sbjct: 87 LGFSSDGDD--LCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENH 144
Query: 1169 IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN---TLVTGGVRGTLPWMAPELLNG 1225
+H D+K N+L++ K+ DFGL++ + + GT + APE L G
Sbjct: 145 HIHRDIKSANILLDEA----FTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG 200
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTG 1249
+++ K D++SFG+VL EI+TG
Sbjct: 201 ---EITPKSDIYSFGVVLLEIITG 221
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 64
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 121
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ +FG S +R TL GTL
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIANFGWSVHAPSSRRTTLC-----GTL 172
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 173 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 228
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 229 DFVTEGARDLISRLLKHNPSQRPMLREV 256
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By A
Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine Aurora
Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 66
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 123
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R TL GTL
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRTTLC-----GTL 174
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 175 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 230
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 231 DFVTEGARDLISRLLKHNPSQRPMLREV 258
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Novel Bosutinib Isoform 1, Previously Thought To Be
Bosutinib
Length = 293
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 124/272 (45%), Gaps = 25/272 (9%)
Query: 1041 NEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
NE E + ELG G FG VY K + G A K I+ T E E ++ E EI
Sbjct: 10 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIE----TKSEEELE----DYIVEIEI 61
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L+ HP +V G G L + EF G++ ++L +R L + ++
Sbjct: 62 LATCDHPYIVKLLGAYYHD--GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML 119
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT-GGVRGTLPW 1217
+ +LHSK I+H DLK N+L+ L+ IR + DFG+S TL GT W
Sbjct: 120 EALNFLHSKRIIHRDLKAGNVLMTLEGDIR----LADFGVSAKNLKTLQKRDSFIGTPYW 175
Query: 1218 MAPELLNGSSSK---VSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP- 1273
MAPE++ + K K D++S GI L E+ E P+ ++ ++ I + PP
Sbjct: 176 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD--PPT 233
Query: 1274 --VPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
P E+R ++ +P RPS ++
Sbjct: 234 LLTPSKWSVEFRDFLKIALDKNPETRPSAAQL 265
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea Inhibitor
Length = 267
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 61
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 118
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R TL GTL
Sbjct: 119 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRTTLC-----GTL 169
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 170 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 225
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 226 DFVTEGARDLISRLLKHNPSQRPMLREV 253
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 65
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 122
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R TL GTL
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRTTLC-----GTL 173
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 174 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 229
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 17/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+D + ++ LG G FG VY + + +A+K + KS E+E + + RE EI
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKS-----QLEKEGVEHQLRREIEIQ 68
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ Y D + + EF G L + L K D ++ + A
Sbjct: 69 SHLRHPNILRMYNYFHDR--KRIYLMLEFAPRGEL-YKELQKHGRFDEQRSATFMEELAD 125
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
+ Y H + ++H D+K +NLL+ K + K+ DFG S + +L + GTL ++
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYKGEL----KIADFGWS-VHAPSLRRRXMCGTLDYLP 180
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ G + EKVD++ G++ +E L G P+ + + IVN L+ P
Sbjct: 181 PEMIEGKTH--DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP 232
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
Length = 348
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 123/260 (47%), Gaps = 20/260 (7%)
Query: 1044 LEELKELGSGTFGTVYHGK-WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
+L+E+G G+FG VY + R ++V IKK ++G+ S ++ + +E L KL
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVV--AIKKMSYSGKQSNEK--WQDIIKEVRFLQKL 111
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN + + G L V E+ + GS +L ++ L + + A G+
Sbjct: 112 RHPNTIQYRGCYLREHTAWL--VMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLA 168
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK--RNTLVTGGVRGTLPWMAP 1220
YLHS N++H D+K N+L L +P + K+GDFG + I N V GT WMAP
Sbjct: 169 YLHSHNMIHRDVKAGNIL--LSEP--GLVKLGDFGSASIMAPANXFV-----GTPYWMAP 219
Query: 1221 E-LLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
E +L + KVDV+S GI E+ + P NM+ + + I N G
Sbjct: 220 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWS 279
Query: 1280 SEWRLLMEQCWAPDPVVRPS 1299
+R ++ C P RP+
Sbjct: 280 EYFRNFVDSCLQKIPQDRPT 299
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis Of
A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 122/264 (46%), Gaps = 19/264 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 63
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 120
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
+ Y HSK ++H D+K +NLL+ + K+ DFG S ++ T + GTL ++
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRT-DLCGTLDYLP 175
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
PE++ G EKVD++S G++ +E L G+ P+ Y I + + P F
Sbjct: 176 PEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVT 231
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEI 1303
R L+ + +P RP E+
Sbjct: 232 EGARDLISRLLKHNPSQRPMLREV 255
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 122/264 (46%), Gaps = 19/264 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 67
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 124
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
+ Y HSK ++H D+K +NLL+ + K+ DFG S ++ T + GTL ++
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRT-DLCGTLDYLP 179
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
PE++ G EKVD++S G++ +E L G+ P+ Y I + + P F
Sbjct: 180 PEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVT 235
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEI 1303
R L+ + +P RP E+
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREV 259
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp
Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12
An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp
Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12
An 193189
Length = 337
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 141/316 (44%), Gaps = 68/316 (21%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK 1101
+ ++ +K++G G +G V+ GKWRG VA+K FT + ++RE EI
Sbjct: 37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVF----FTTEEA-------SWFRETEIYQT 85
Query: 1102 --LHHPNVVAFYGVVQDGPGGT--LATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
+ H N++ F G G L +T++ NGSL L K LD + L +A +
Sbjct: 86 VLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSS 143
Query: 1158 AFGMEYLHSK--------NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS---------- 1199
G+ +LH++ I H DLK N+LV C + D GL+
Sbjct: 144 VSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT----CCIADLGLAVKFISDTNEV 199
Query: 1200 KIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEK----VDVFSFGIVLWEI----LTG-- 1249
I NT V GT +M PE+L+ S ++ + D++SFG++LWE+ ++G
Sbjct: 200 DIPPNTRV-----GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGI 254
Query: 1250 ----EEPYANM-----HYGAIIGGIVNNTLRPPVPGFCDSEWRL-----LMEQCWAPDPV 1295
+ PY ++ Y + + LRP P S+ L LM +CWA +P
Sbjct: 255 VEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPA 314
Query: 1296 VRPSFTEIARRLRVMS 1311
R + + + L MS
Sbjct: 315 SRLTALRVKKTLAKMS 330
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 19/264 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 64
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 121
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
+ Y HSK ++H D+K +NLL+ + K+ DFG S + + + GTL ++
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWS-VHAPSSRRXXLCGTLDYLP 176
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
PE++ G EKVD++S G++ +E L G+ P+ Y I + + P F
Sbjct: 177 PEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVT 232
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEI 1303
R L+ + +P RP E+
Sbjct: 233 EGARDLISRLLKHNPSQRPMLREV 256
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 141/302 (46%), Gaps = 35/302 (11%)
Query: 1024 VDLALGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGR 1081
VDL N ++ E +L+++G G+FG V+ G T VAIK I
Sbjct: 11 VDLGTENLYFQSMD--PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE 68
Query: 1082 SSEQERLTLEFWREAEILSKLHHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLS 1140
+ ++ E +LS+ P V +YG ++D L + E++ GS +L
Sbjct: 69 IEDIQQ-------EITVLSQCDSPYVTKYYGSYLKDT---KLWIIMEYLGGGSALDLL-- 116
Query: 1141 KERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-- 1198
+ LD + I + G++YLHS+ +H D+K N+L++ + K+ DFG+
Sbjct: 117 EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEV----KLADFGVAG 172
Query: 1199 ----SKIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYA 1254
++IKRNT V GT WMAPE++ S+ K D++S GI E+ GE P++
Sbjct: 173 QLTDTQIKRNTFV-----GTPFWMAPEVIKQSA--YDSKADIWSLGITAIELARGEPPHS 225
Query: 1255 NMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAAC 1314
+H ++ I N P + G + +E C +P RP+ E+ + ++ A
Sbjct: 226 ELHPMKVLFLIPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 284
Query: 1315 QT 1316
+T
Sbjct: 285 KT 286
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 62
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 119
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R L GTL
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRTELC-----GTL 170
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 171 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 226
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 34/269 (12%)
Query: 1047 LKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
LK +G G F V + G +VA+K I K+ S ++ +RE I+ L+H
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK------LFREVRIMKVLNH 72
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLS----KERHLDRRKRLIIAMDAAFG 1160
PN+V + V++ TL V E+ G + L++ KE+ + R I++
Sbjct: 73 PNIVKLFEVIETEK--TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----A 125
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----GVRGTLP 1216
++Y H K IVH DLK +NLL++ I K+ DFG S N G G P
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNI----KIADFGFS----NEFTFGNKLDAFCGAPP 177
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPG 1276
+ APEL G E VDV+S G++L+ +++G P+ + + ++ R +P
Sbjct: 178 YAAPELFQGKKYDGPE-VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPF 234
Query: 1277 FCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
+ ++ L+++ +P R + +I +
Sbjct: 235 YMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 34/269 (12%)
Query: 1047 LKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
LK +G G F V + G +VA+K I K+ S ++ +RE I+ L+H
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK------LFREVRIMKVLNH 72
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLS----KERHLDRRKRLIIAMDAAFG 1160
PN+V + V++ TL V E+ G + L++ KE+ + R I++
Sbjct: 73 PNIVKLFEVIETEK--TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----A 125
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTL----P 1216
++Y H K IVH DLK +NLL++ I K+ DFG S N G T P
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNI----KIADFGFS----NEFTFGNKLDTFCGSPP 177
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPG 1276
+ APEL G E VDV+S G++L+ +++G P+ + + ++ R +P
Sbjct: 178 YAAPELFQGKKYDGPE-VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPF 234
Query: 1277 FCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
+ ++ L+++ +P R + +I +
Sbjct: 235 YMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 34/269 (12%)
Query: 1047 LKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
LK +G G F V + G +VA+K I K+ S ++ +RE I+ L+H
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK------LFREVRIMKVLNH 72
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLS----KERHLDRRKRLIIAMDAAFG 1160
PN+V + V++ TL V E+ G + L++ KE+ + R I++
Sbjct: 73 PNIVKLFEVIETEK--TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----A 125
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTL----P 1216
++Y H K IVH DLK +NLL++ I K+ DFG S N G T P
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNI----KIADFGFS----NEFTFGNKLDTFCGSPP 177
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPG 1276
+ APEL G E VDV+S G++L+ +++G P+ + + ++ R +P
Sbjct: 178 YAAPELFQGKKYDGPE-VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPF 234
Query: 1277 FCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
+ ++ L+++ +P R + +I +
Sbjct: 235 YMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole Inhibitor
Length = 268
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 19/264 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 62
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 119
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
+ Y HSK ++H D+K +NLL+ + K+ DFG S + + + GTL ++
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWS-VHAPSSRRAALCGTLDYLP 174
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
PE++ G EKVD++S G++ +E L G+ P+ Y I + + P F
Sbjct: 175 PEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVT 230
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEI 1303
R L+ + +P RP E+
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREV 254
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 123/260 (47%), Gaps = 20/260 (7%)
Query: 1044 LEELKELGSGTFGTVYHGK-WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
+L+E+G G+FG VY + R ++V IKK ++G+ S ++ + +E L KL
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVV--AIKKMSYSGKQSNEK--WQDIIKEVRFLQKL 72
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN + + G L V E+ + GS +L ++ L + + A G+
Sbjct: 73 RHPNTIQYRGCYLREHTAWL--VMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLA 129
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK--RNTLVTGGVRGTLPWMAP 1220
YLHS N++H D+K N+L L +P + K+GDFG + I N V GT WMAP
Sbjct: 130 YLHSHNMIHRDVKAGNIL--LSEP--GLVKLGDFGSASIMAPANXFV-----GTPYWMAP 180
Query: 1221 E-LLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
E +L + KVDV+S GI E+ + P NM+ + + I N G
Sbjct: 181 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWS 240
Query: 1280 SEWRLLMEQCWAPDPVVRPS 1299
+R ++ C P RP+
Sbjct: 241 EYFRNFVDSCLQKIPQDRPT 260
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 122/264 (46%), Gaps = 19/264 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 62
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 119
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
+ Y HSK ++H D+K +NLL+ + K+ DFG S ++ T + GTL ++
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRT-DLCGTLDYLP 174
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
PE++ G EKVD++S G++ +E L G+ P+ Y I + + P F
Sbjct: 175 PEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVT 230
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEI 1303
R L+ + +P RP E+
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREV 254
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic
Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A Pentacyclic
Inhibitor
Length = 268
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 19/264 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 62
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 119
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
+ Y HSK ++H D+K +NLL+ + K+ DFG S + + + GTL ++
Sbjct: 120 ALSYCHSKKVIHRDIKPENLLLGSAGEL----KIADFGWS-VHAPSSRRAALCGTLDYLP 174
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
PE++ G EKVD++S G++ +E L G+ P+ Y I + + P F
Sbjct: 175 PEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRI--SRVEFTFPDFVT 230
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEI 1303
R L+ + +P RP E+
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREV 254
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 122/264 (46%), Gaps = 19/264 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 62
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 119
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
+ Y HSK ++H D+K +NLL+ + K+ DFG S ++ T + GTL ++
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRT-DLCGTLDYLP 174
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
PE++ G EKVD++S G++ +E L G+ P+ Y I + + P F
Sbjct: 175 PEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVT 230
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEI 1303
R L+ + +P RP E+
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREV 254
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor
Length = 272
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 65
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 122
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ +FG S +R TL GTL
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIANFGWSVHAPSSRRTTLC-----GTL 173
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 174 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 229
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase
5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase
5
Length = 295
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 1050 LGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG GT+G VY G+ V AIK I + R S R + E + L H N+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPE-----RDS---RYSQPLHEEIALHKHLKHKNI 81
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI--IAMDAAFGMEYLH 1165
V + G + G + E + GSL +L SK L ++ I G++YLH
Sbjct: 82 VQYLGSFSEN--GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH 139
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRNTLVTGGVRGTLPWMAPELLN 1224
IVH D+K DN+L+N + K+ DFG SK + T GTL +MAPE+++
Sbjct: 140 DNQIVHRDIKGDNVLIN---TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIID 196
Query: 1225 GSSSKVSEKVDVFSFGIVLWEILTGEEPYANM-HYGAIIGGIVNNTLRPPVPGFCDSEWR 1283
+ D++S G + E+ TG+ P+ + A + + + P +P +E +
Sbjct: 197 KGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAK 256
Query: 1284 LLMEQCWAPDP 1294
+ +C+ PDP
Sbjct: 257 AFILKCFEPDP 267
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 34/269 (12%)
Query: 1047 LKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
LK +G G F V + G +VA+K I K+ S ++ +RE I L+H
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK------LFREVRIXKVLNH 72
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLS----KERHLDRRKRLIIAMDAAFG 1160
PN+V + V++ TL V E+ G + L++ KE+ + R I++
Sbjct: 73 PNIVKLFEVIETEK--TLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS-----A 125
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----GVRGTLP 1216
++Y H K IVH DLK +NLL++ I K+ DFG S N G G P
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADXNI----KIADFGFS----NEFTFGNKLDAFCGAPP 177
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPG 1276
+ APEL G E VDV+S G++L+ +++G P+ + + ++ R +P
Sbjct: 178 YAAPELFQGKKYDGPE-VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPF 234
Query: 1277 FCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
+ ++ L+++ +P R + +I +
Sbjct: 235 YXSTDCENLLKKFLILNPSKRGTLEQIXK 263
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24)
Length = 304
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 135/284 (47%), Gaps = 33/284 (11%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E +L+++G G+FG V+ G T VAIK I + ++ E +L
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ-------EITVL 59
Query: 1100 SKLHHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
S+ P V +YG ++D L + E++ GS +L + LD + I +
Sbjct: 60 SQCDSPYVTKYYGSYLKDT---KLWIIMEYLGGGSALDLL--EPGPLDETQIATILREIL 114
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL------SKIKRNTLVTGGVR 1212
G++YLHS+ +H D+K N+L++ + K+ DFG+ ++IKRNT V
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLSEHGEV----KLADFGVAGQLTDTQIKRNTFV----- 165
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRP 1272
GT WMAPE++ S+ K D++S GI E+ GE P++ +H ++ I N P
Sbjct: 166 GTPFWMAPEVIKQSA--YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-PP 222
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAACQT 1316
+ G + +E C +P RP+ E+ + ++ A +T
Sbjct: 223 TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKT 266
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 118/260 (45%), Gaps = 30/260 (11%)
Query: 1042 EDLEELK-ELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
ED E+ ELG G FG VY + + T V + + SE+E ++ E +IL+
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSV----LAAAKVIDTKSEEE--LEDYMVEIDILA 89
Query: 1101 KLHHPNVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
HPN+V AFY L + EF G++ V+L ER L + ++
Sbjct: 90 SCDHPNIVKLLDAFYY------ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLVTGGVRGTL 1215
+ YLH I+H DLK N+L L I K+ DFG+S K R GT
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDI----KLADFGVSAKNTRTIQRRDSFIGTP 199
Query: 1216 PWMAPELLNGSSSK---VSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRP 1272
WMAPE++ +SK K DV+S GI L E+ E P+ ++ ++ I + P
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS--EP 257
Query: 1273 PV---PGFCDSEWRLLMEQC 1289
P P S ++ +++C
Sbjct: 258 PTLAQPSRWSSNFKDFLKKC 277
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
Length = 327
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 127/269 (47%), Gaps = 34/269 (12%)
Query: 1047 LKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
LK +G G F V + G +VA++ I K+ S ++ +RE I+ L+H
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQK------LFREVRIMKVLNH 72
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLS----KERHLDRRKRLIIAMDAAFG 1160
PN+V + V++ TL V E+ G + L++ KE+ + R I++
Sbjct: 73 PNIVKLFEVIETEK--TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----A 125
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGG----VRGTLP 1216
++Y H K IVH DLK +NLL++ I K+ DFG S N G G+ P
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNI----KIADFGFS----NEFTFGNKLDEFCGSPP 177
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPG 1276
+ APEL G E VDV+S G++L+ +++G P+ + + ++ R +P
Sbjct: 178 YAAPELFQGKKYDGPE-VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPF 234
Query: 1277 FCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
+ ++ L+++ +P R + +I +
Sbjct: 235 YMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 34/269 (12%)
Query: 1047 LKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
LK +G G F V + G +VA++ I K+ S ++ +RE I+ L+H
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQK------LFREVRIMKVLNH 72
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLS----KERHLDRRKRLIIAMDAAFG 1160
PN+V + V++ TL V E+ G + L++ KE+ + R I++
Sbjct: 73 PNIVKLFEVIETEK--TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----A 125
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTL----P 1216
++Y H K IVH DLK +NLL++ I K+ DFG S N G T P
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNI----KIADFGFS----NEFTFGNKLDTFCGSPP 177
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPG 1276
+ APEL G E VDV+S G++L+ +++G P+ + + ++ R +P
Sbjct: 178 YAAPELFQGKKYDGPE-VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPF 234
Query: 1277 FCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
+ ++ L+++ +P R + +I +
Sbjct: 235 YMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic
Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic
Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 65
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 122
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R+ L GTL
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRDDLC-----GTL 173
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 174 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 229
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
Length = 319
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%), Gaps = 47/293 (16%)
Query: 1023 LVDLALGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTG 1080
+ DL +GN+ + LK +G G F V + G +VA+K I K+
Sbjct: 1 MADLHIGNYRL-------------LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS 47
Query: 1081 RSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLS 1140
S ++ +RE I+ L+HPN+V + V++ TL V E+ G + L++
Sbjct: 48 SSLQK------LFREVRIMKVLNHPNIVKLFEVIETEK--TLYLVMEYASGGEVFDYLVA 99
Query: 1141 ----KERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDF 1196
KE+ + R I++ ++Y H K IVH DLK +NLL++ I K+ DF
Sbjct: 100 HGWMKEKEARAKFRQIVS-----AVQYCHQKFIVHRDLKAENLLLDADMNI----KIADF 150
Query: 1197 GLSKIKRNTLVTGGVRGTL----PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEP 1252
G S N G T P+ APEL G E VDV+S G++L+ +++G P
Sbjct: 151 GFS----NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE-VDVWSLGVILYTLVSGSLP 205
Query: 1253 YANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
+ + + ++ R +P + ++ L+++ +P R + +I +
Sbjct: 206 FDGQNLKELRERVLRGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 256
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 118/260 (45%), Gaps = 30/260 (11%)
Query: 1042 EDLEELK-ELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
ED E+ ELG G FG VY + + T V + + SE+E ++ E +IL+
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSV----LAAAKVIDTKSEEE--LEDYMVEIDILA 89
Query: 1101 KLHHPNVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
HPN+V AFY L + EF G++ V+L ER L + ++
Sbjct: 90 SCDHPNIVKLLDAFYY------ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLVTGGVRGTL 1215
+ YLH I+H DLK N+L L I K+ DFG+S K R GT
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDI----KLADFGVSAKNTRXIQRRDSFIGTP 199
Query: 1216 PWMAPELLNGSSSK---VSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRP 1272
WMAPE++ +SK K DV+S GI L E+ E P+ ++ ++ I + P
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS--EP 257
Query: 1273 PV---PGFCDSEWRLLMEQC 1289
P P S ++ +++C
Sbjct: 258 PTLAQPSRWSSNFKDFLKKC 277
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 30/257 (11%)
Query: 1019 AGIPLVDLALGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKS 1076
A +P + +FDI + LG G FG VY + + +A+K + KS
Sbjct: 5 AEMPKRKFTIDDFDIG-------------RPLGKGKFGNVYLAREKQNKFIMALKVLFKS 51
Query: 1077 CFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRH 1136
E+E + + RE EI S L HPN++ Y D + + EF G L +
Sbjct: 52 -----QLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR--KRIYLMLEFAPRGEL-Y 103
Query: 1137 VLLSKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDF 1196
L K D ++ + A + Y H + ++H D+K +NLL+ K + K+ DF
Sbjct: 104 KELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGEL----KIADF 159
Query: 1197 GLSKIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANM 1256
G S + +L + GTL ++ PE++ G + EKVD++ G++ +E L G P+ +
Sbjct: 160 GWS-VHAPSLRRRXMCGTLDYLPPEMIEGKTH--DEKVDLWCAGVLCYEFLVGMPPFDSP 216
Query: 1257 HYGAIIGGIVNNTLRPP 1273
+ IVN L+ P
Sbjct: 217 SHTETHRRIVNVDLKFP 233
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 27/268 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 62
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 119
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R L GTL
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWSVHAPSSRRTXLC-----GTL 170
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP 1275
++ PE++ G EKVD++S G++ +E L G+ P+ Y I + + P
Sbjct: 171 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFP 226
Query: 1276 GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
F R L+ + +P RP E+
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 14/206 (6%)
Query: 1050 LGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G+FG V K G + A+K I K ++ ++ L RE ++L +L HPN+
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL-----REVQLLKQLDHPNI 112
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ Y +D G V E G L ++S++R + II + G+ Y+H
Sbjct: 113 MKLYEFFEDK--GYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS-GITYMHKN 169
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSS 1227
IVH DLK +NLL+ K I ++ DFGLS + GT ++APE+L+G+
Sbjct: 170 KIVHRDLKPENLLLESKSKDANI-RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT- 227
Query: 1228 SKVSEKVDVFSFGIVLWEILTGEEPY 1253
EK DV+S G++L+ +L+G P+
Sbjct: 228 --YDEKCDVWSTGVILYILLSGCPPF 251
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 133/300 (44%), Gaps = 34/300 (11%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
I E LE + +G G FG VYHG+W G +VAI+ I R +E + F RE
Sbjct: 30 IPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLID----IERDNEDQ--LKAFKREVMA 82
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
+ H NVV F G P LA +T +L V+ + LD K IA +
Sbjct: 83 YRQTRHENVVLFMGACMSPP--HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIV 140
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR------ 1212
GM YLH+K I+H DLK N+ + + + DFGL I + ++ G R
Sbjct: 141 KGMGYLHAKGILHKDLKSKNVFYDNGKVV-----ITDFGLFSI--SGVLQAGRREDKLRI 193
Query: 1213 --GTLPWMAPELLNGSSSK-------VSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIG 1263
G L +APE++ S S+ DVF+ G + +E+ E P+ AII
Sbjct: 194 QNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW 253
Query: 1264 GIVNNTLRPPVPGF-CDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAACQTKSH-GH 1321
+ ++P + E ++ CWA + RP+FT++ L + + SH GH
Sbjct: 254 QM-GTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHPGH 312
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition By
Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition By
Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A Taxol-
Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A Taxol-
Induced Checkpoint Sensitivity Screen
Length = 284
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 30/257 (11%)
Query: 1019 AGIPLVDLALGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKS 1076
A +P + +FDI + LG G FG VY + + +A+K + KS
Sbjct: 4 AEMPKRKFTIDDFDIG-------------RPLGKGKFGNVYLAREKQNKFIMALKVLFKS 50
Query: 1077 CFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRH 1136
E+E + + RE EI S L HPN++ Y D + + EF G L +
Sbjct: 51 -----QLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR--KRIYLMLEFAPRGEL-Y 102
Query: 1137 VLLSKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDF 1196
L K D ++ + A + Y H + ++H D+K +NLL+ K + K+ DF
Sbjct: 103 KELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGEL----KIADF 158
Query: 1197 GLSKIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANM 1256
G S + +L + GTL ++ PE++ G + EKVD++ G++ +E L G P+ +
Sbjct: 159 GWS-VHAPSLRRRXMCGTLDYLPPEMIEGKTH--DEKVDLWCAGVLCYEFLVGMPPFDSP 215
Query: 1257 HYGAIIGGIVNNTLRPP 1273
+ IVN L+ P
Sbjct: 216 SHTETHRRIVNVDLKFP 232
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 14/206 (6%)
Query: 1050 LGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G+FG V K G + A+K I K ++ ++ L RE ++L +L HPN+
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL-----REVQLLKQLDHPNI 111
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ Y +D G V E G L ++S++R + II + G+ Y+H
Sbjct: 112 MKLYEFFEDK--GYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS-GITYMHKN 168
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSS 1227
IVH DLK +NLL+ K I ++ DFGLS + GT ++APE+L+G+
Sbjct: 169 KIVHRDLKPENLLLESKSKDANI-RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT- 226
Query: 1228 SKVSEKVDVFSFGIVLWEILTGEEPY 1253
EK DV+S G++L+ +L+G P+
Sbjct: 227 --YDEKCDVWSTGVILYILLSGCPPF 250
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 25/223 (11%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + + LG G FG VY + R + +A+K + K+ E + RE EI
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQ-----LRREVEIQ 66
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSRFDEQRTATYITELAN 123
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R+TL GTL
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGEL----KIADFGWSVHAPSSRRDTLC-----GTL 174
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
++ PE++ G EKVD++S G++ +E L G P+ Y
Sbjct: 175 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGMPPFEAHTY 215
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 134/284 (47%), Gaps = 33/284 (11%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E +L+++G G+FG V+ G T VAIK I + ++ E +L
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ-------EITVL 74
Query: 1100 SKLHHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
S+ P V +YG ++D L + E++ GS +L + LD + I +
Sbjct: 75 SQCDSPYVTKYYGSYLKDT---KLWIIMEYLGGGSALDLL--EPGPLDETQIATILREIL 129
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL------SKIKRNTLVTGGVR 1212
G++YLHS+ +H D+K N+L++ + K+ DFG+ ++IKRN V
Sbjct: 130 KGLDYLHSEKKIHRDIKAANVLLSEHGEV----KLADFGVAGQLTDTQIKRNXFV----- 180
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRP 1272
GT WMAPE++ S+ K D++S GI E+ GE P++ +H ++ I N P
Sbjct: 181 GTPFWMAPEVIKQSA--YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-PP 237
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAACQT 1316
+ G + +E C +P RP+ E+ + ++ A +T
Sbjct: 238 TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKT 281
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860
Length = 467
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 1045 EELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
+ +K+LGSG +G V K G + AIK IKKS T S+ L E +L +L
Sbjct: 7 QRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLD-----EVAVLKQL 61
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ Y +D L V E G L ++ +++ +I G
Sbjct: 62 DHPNIMKLYEFFEDKRNYYL--VMEVYRGGELFDEIILRQK-FSEVDAAVIMKQVLSGTT 118
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR---GTLPWMA 1219
YLH NIVH DLK +NLL+ K + K+ DFGLS + V G ++ GT ++A
Sbjct: 119 YLHKHNIVHRDLKPENLLLESKSR-DALIKIVDFGLSA---HFEVGGKMKERLGTAYYIA 174
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYA 1254
PE+L K EK DV+S G++L+ +L G P+
Sbjct: 175 PEVLR---KKYDEKCDVWSCGVILYILLCGYPPFG 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 19/264 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 62
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 119
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
+ Y HSK ++H D+K +NLL+ + K+ DFG S + + + GTL ++
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWS-VHAPSSRRXXLCGTLDYLP 174
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
PE++ G EKVD++S G++ +E L G+ P+ Y I + + P F
Sbjct: 175 PEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVT 230
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEI 1303
R L+ + +P RP E+
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREV 254
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 19/264 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED E + LG G FG VY + + + +A+K + K+ E + RE EI
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-----LRREVEIQ 65
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSKFDEQRTATYITELAN 122
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
+ Y HSK ++H D+K +NLL+ + K+ DFG S + + + GTL ++
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGEL----KIADFGWS-VHAPSSRRXXLCGTLDYLP 177
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
PE++ G EKVD++S G++ +E L G+ P+ Y I + + P F
Sbjct: 178 PEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVT 233
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEI 1303
R L+ + +P RP E+
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREV 257
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 14/206 (6%)
Query: 1050 LGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G+FG V K G + A+K I K ++ ++ L RE ++L +L HPN+
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL-----REVQLLKQLDHPNI 88
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ Y +D G V E G L ++S++R + II + G+ Y+H
Sbjct: 89 MKLYEFFEDK--GYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS-GITYMHKN 145
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSS 1227
IVH DLK +NLL+ K I ++ DFGLS + GT ++APE+L+G+
Sbjct: 146 KIVHRDLKPENLLLESKSKDANI-RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT- 203
Query: 1228 SKVSEKVDVFSFGIVLWEILTGEEPY 1253
EK DV+S G++L+ +L+G P+
Sbjct: 204 --YDEKCDVWSTGVILYILLSGCPPF 227
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 118/260 (45%), Gaps = 30/260 (11%)
Query: 1042 EDLEELK-ELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
ED E+ ELG G FG VY + + T V + + SE+E ++ E +IL+
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSV----LAAAKVIDTKSEEE--LEDYMVEIDILA 89
Query: 1101 KLHHPNVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
HPN+V AFY L + EF G++ V+L ER L + ++
Sbjct: 90 SCDHPNIVKLLDAFYY------ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLVTGGVRGTL 1215
+ YLH I+H DLK N+L L I K+ DFG+S K R GT
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDI----KLADFGVSAKNTRXIQRRDXFIGTP 199
Query: 1216 PWMAPELLNGSSSK---VSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRP 1272
WMAPE++ +SK K DV+S GI L E+ E P+ ++ ++ I + P
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS--EP 257
Query: 1273 PV---PGFCDSEWRLLMEQC 1289
P P S ++ +++C
Sbjct: 258 PTLAQPSRWSSNFKDFLKKC 277
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 1050 LGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG GT+G VY G+ V AIK I + R S R + E + L H N+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPE-----RDS---RYSQPLHEEIALHKHLKHKNI 67
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF--GMEYLH 1165
V + G + G + E + GSL +L SK L ++ I G++YLH
Sbjct: 68 VQYLGSFSEN--GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH 125
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRNTLVTGGVRGTLPWMAPELLN 1224
IVH D+K DN+L+N + K+ DFG SK + T GTL +MAPE+++
Sbjct: 126 DNQIVHRDIKGDNVLIN---TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIID 182
Query: 1225 GSSSKVSEKVDVFSFGIVLWEILTGEEPYANM-HYGAIIGGIVNNTLRPPVPGFCDSEWR 1283
+ D++S G + E+ TG+ P+ + A + + + P +P +E +
Sbjct: 183 KGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAK 242
Query: 1284 LLMEQCWAPDP 1294
+ +C+ PDP
Sbjct: 243 AFILKCFEPDP 253
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With [7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 106/223 (47%), Gaps = 25/223 (11%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + + LG G FG VY + R + +A+K + K+ E + RE EI
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQ-----LRREVEIQ 66
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S L HPN++ YG D L + E+ G++ + L K D ++ + A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYL--ILEYAPLGTV-YRELQKLSRFDEQRTATYITELAN 123
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y HSK ++H D+K +NLL+ + K+ DFG S +R TL GTL
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGEL----KIADFGWSVHAPSSRRTTLC-----GTL 174
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
++ PE++ G EKVD++S G++ +E L G P+ Y
Sbjct: 175 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGMPPFEAHTY 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 16/192 (8%)
Query: 1067 DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQ-DGPGGTLATV 1125
DVA+K ++ + L F REA+ + L+HP +VA Y + + P G L +
Sbjct: 39 DVAVKVLRADL-----ARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYI 93
Query: 1126 TEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKD 1185
V+G ++ E + ++ + + DA + + H I+H D+K N++++ +
Sbjct: 94 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN 153
Query: 1186 PIRPICKVGDFGLSKIKRNT----LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGI 1241
+ KV DFG+++ ++ T V GT +++PE G S V + DV+S G
Sbjct: 154 AV----KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS--VDARSDVYSLGC 207
Query: 1242 VLWEILTGEEPY 1253
VL+E+LTGE P+
Sbjct: 208 VLYEVLTGEPPF 219
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 1045 EELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
+ +K+LGSG +G V K G + AIK IKKS T S+ L E +L +L
Sbjct: 24 QRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLD-----EVAVLKQL 78
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ Y +D L V E G L ++ +++ +I G
Sbjct: 79 DHPNIMKLYEFFEDKRNYYL--VMEVYRGGELFDEIILRQK-FSEVDAAVIMKQVLSGTT 135
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR---GTLPWMA 1219
YLH NIVH DLK +NLL+ K + K+ DFGLS + V G ++ GT ++A
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSR-DALIKIVDFGLSA---HFEVGGKMKERLGTAYYIA 191
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
PE+L K EK DV+S G++L+ +L G P+
Sbjct: 192 PEVLR---KKYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 132/283 (46%), Gaps = 31/283 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E +L+ +G G+FG V+ G T VAIK I + ++ E +L
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQ-------EITVL 75
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+ V +YG G L + E++ GS +L + D + + +
Sbjct: 76 SQCDSSYVTKYYGSYLKG--SKLWIIMEYLGGGSALDLL--RAGPFDEFQIATMLKEILK 131
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL------SKIKRNTLVTGGVRG 1213
G++YLHS+ +H D+K N+L++ + + K+ DFG+ ++IKRNT V G
Sbjct: 132 GLDYLHSEKKIHRDIKAANVLLSEQGDV----KLADFGVAGQLTDTQIKRNTFV-----G 182
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
T WMAPE++ S+ K D++S GI E+ GE P ++MH ++ I N P
Sbjct: 183 TPFWMAPEVIQQSA--YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN-PPT 239
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAACQT 1316
+ G ++ ++ C DP RP+ E+ + ++ + +T
Sbjct: 240 LVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKT 282
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 16/192 (8%)
Query: 1067 DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQ-DGPGGTLATV 1125
DVA+K ++ + L F REA+ + L+HP +VA Y + + P G L +
Sbjct: 39 DVAVKVLRADL-----ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 1126 TEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKD 1185
V+G ++ E + ++ + + DA + + H I+H D+K N+L++ +
Sbjct: 94 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATN 153
Query: 1186 PIRPICKVGDFGLSKIKRNT----LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGI 1241
+ KV DFG+++ ++ T V GT +++PE G S V + DV+S G
Sbjct: 154 AV----KVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDS--VDARSDVYSLGC 207
Query: 1242 VLWEILTGEEPY 1253
VL+E+LTGE P+
Sbjct: 208 VLYEVLTGEPPF 219
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP
DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 16/192 (8%)
Query: 1067 DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQ-DGPGGTLATV 1125
DVA+K ++ + L F REA+ + L+HP +VA Y + + P G L +
Sbjct: 39 DVAVKVLRADL-----ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 1126 TEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKD 1185
V+G ++ E + ++ + + DA + + H I+H D+K N++++ +
Sbjct: 94 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN 153
Query: 1186 PIRPICKVGDFGLSKIKRNT----LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGI 1241
+ KV DFG+++ ++ T V GT +++PE G S V + DV+S G
Sbjct: 154 AV----KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS--VDARSDVYSLGC 207
Query: 1242 VLWEILTGEEPY 1253
VL+E+LTGE P+
Sbjct: 208 VLYEVLTGEPPF 219
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 87.4 bits (215), Expect = 5e-17, Method: Composition-based stats.
Identities = 82/275 (29%), Positives = 133/275 (48%), Gaps = 25/275 (9%)
Query: 1030 NFDISTLQI-IKNEDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQE 1086
N + +LQI +K ED E K LG G+FG V+ +++ T+ AIK +KK +
Sbjct: 5 NKERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVEC 64
Query: 1087 RLTLEFWREAEILS-KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHL 1145
+ E +LS HP + + Q L V E++ G L + + S +
Sbjct: 65 TMV-----EKRVLSLAWEHPFLTHMFCTFQTKE--NLFFVMEYLNGGDLMYHIQSCHK-F 116
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
D + A + G+++LHSK IV+ DLK DN+L++ I K+ DFG+ K N
Sbjct: 117 DLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHI----KIADFGMC--KENM 170
Query: 1206 L---VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
L T GT ++APE+L G K + VD +SFG++L+E+L G+ P+ +
Sbjct: 171 LGDAKTNEFCGTPDYIAPEILLG--QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 228
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVR 1297
I + P P + + E + L+ + + +P R
Sbjct: 229 HSIRMDN--PFYPRWLEKEAKDLLVKLFVREPEKR 261
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24)
In Complex With Staurosporine
Length = 304
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 134/284 (47%), Gaps = 33/284 (11%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E +L+++G G+FG V+ G T VAIK I + ++ E +L
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ-------EITVL 59
Query: 1100 SKLHHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
S+ P V +YG ++D L + E++ GS +L + LD + I +
Sbjct: 60 SQCDSPYVTKYYGSYLKDT---KLWIIMEYLGGGSALDLL--EPGPLDETQIATILREIL 114
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL------SKIKRNTLVTGGVR 1212
G++YLHS+ +H D+K N+L++ + K+ DFG+ ++IKRN V
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLSEHGEV----KLADFGVAGQLTDTQIKRNXFV----- 165
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRP 1272
GT WMAPE++ S+ K D++S GI E+ GE P++ +H ++ I N P
Sbjct: 166 GTPFWMAPEVIKQSA--YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-PP 222
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAACQT 1316
+ G + +E C +P RP+ E+ + ++ A +T
Sbjct: 223 TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKT 266
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 16/192 (8%)
Query: 1067 DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQ-DGPGGTLATV 1125
DVA+K ++ + L F REA+ + L+HP +VA Y + + P G L +
Sbjct: 39 DVAVKVLRADL-----ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 1126 TEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKD 1185
V+G ++ E + ++ + + DA + + H I+H D+K N++++ +
Sbjct: 94 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN 153
Query: 1186 PIRPICKVGDFGLSKIKRNT----LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGI 1241
+ KV DFG+++ ++ T V GT +++PE G S V + DV+S G
Sbjct: 154 AV----KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS--VDARSDVYSLGC 207
Query: 1242 VLWEILTGEEPY 1253
VL+E+LTGE P+
Sbjct: 208 VLYEVLTGEPPF 219
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of
3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of
3brb-Pp1
Length = 298
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 14/206 (6%)
Query: 1050 LGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G+FG V K G + A+K I K ++ ++ L RE ++L +L HPN+
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL-----REVQLLKQLDHPNI 94
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ Y +D G V E G L ++S++R + II + G+ Y+H
Sbjct: 95 MKLYEFFEDK--GYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS-GITYMHKN 151
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSS 1227
IVH DLK +NLL+ K I ++ DFGLS + GT ++APE+L+G+
Sbjct: 152 KIVHRDLKPENLLLESKSKDANI-RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT- 209
Query: 1228 SKVSEKVDVFSFGIVLWEILTGEEPY 1253
EK DV+S G++L+ +L+G P+
Sbjct: 210 --YDEKCDVWSTGVILYILLSGCPPF 233
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor Whi-P180
Length = 484
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 1050 LGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G+FG V K G + A+K I K ++ ++ L RE ++L +L HPN+
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL-----REVQLLKQLDHPNI 88
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
Y +D G V E G L ++S++R + II + G+ Y H
Sbjct: 89 XKLYEFFEDK--GYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS-GITYXHKN 145
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSS 1227
IVH DLK +NLL+ K I ++ DFGLS + GT ++APE+L+G+
Sbjct: 146 KIVHRDLKPENLLLESKSKDANI-RIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT- 203
Query: 1228 SKVSEKVDVFSFGIVLWEILTGEEPY 1253
EK DV+S G++L+ +L+G P+
Sbjct: 204 --YDEKCDVWSTGVILYILLSGCPPF 227
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb
Length = 311
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 16/192 (8%)
Query: 1067 DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQ-DGPGGTLATV 1125
DVA+K ++ + L F REA+ + L+HP +VA Y + + P G L +
Sbjct: 39 DVAVKVLRADL-----ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 1126 TEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKD 1185
V+G ++ E + ++ + + DA + + H I+H D+K N++++ +
Sbjct: 94 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN 153
Query: 1186 PIRPICKVGDFGLSKIKRNT----LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGI 1241
+ KV DFG+++ ++ T V GT +++PE G S V + DV+S G
Sbjct: 154 AV----KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS--VDARSDVYSLGC 207
Query: 1242 VLWEILTGEEPY 1253
VL+E+LTGE P+
Sbjct: 208 VLYEVLTGEPPF 219
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 131/296 (44%), Gaps = 36/296 (12%)
Query: 1028 LGNFDISTLQIIKNEDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQ 1085
L D +L E + L++LG G++G+VY K G VAIK++ S Q
Sbjct: 15 LKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE-----SDLQ 69
Query: 1086 ERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHL 1145
E + +E I+ + P+VV +YG L V E+ GS+ ++ + + L
Sbjct: 70 EII-----KEISIMQQCDSPHVVKYYG--SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTL 122
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS------ 1199
+ I G+EYLH +H D+K N+L+N + K+ DFG++
Sbjct: 123 TEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGH----AKLADFGVAGQLTDX 178
Query: 1200 KIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYG 1259
KRN ++ GT WMAPE++ D++S GI E+ G+ PYA++H
Sbjct: 179 MAKRNXVI-----GTPFWMAPEVIQEIGYNCV--ADIWSLGITAIEMAEGKPPYADIHPM 231
Query: 1260 AIIGGIVNNTLRPPV---PGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSA 1312
I I N PP P + ++QC P R + T++ + V SA
Sbjct: 232 RAIFMIPTNP--PPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA 285
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 134/307 (43%), Gaps = 56/307 (18%)
Query: 1032 DISTLQIIKNEDLEELKE-LGSGTFGTVYHGKW--RGTDVAIKRIK-KSCFTGRSSEQER 1087
D S L N D EL+E +GSG V + VAIKRI + C T
Sbjct: 4 DSSALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD----- 58
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYG--VVQDGPGGTLATVTEFMVNGS----LRHVLLSK 1141
E +E + +S+ HHPN+V++Y VV+D L V + + GS ++H++
Sbjct: 59 ---ELLKEIQAMSQCHHPNIVSYYTSFVVKD----ELWLVMKLLSGGSVLDIIKHIVAKG 111
Query: 1142 ERH---LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL 1198
E LD I + G+EYLH +H D+K N+L+ ++ + DFG+
Sbjct: 112 EHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQ----IADFGV 167
Query: 1199 SKIKRNTLVTGG------VR----GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
S L TGG VR GT WMAPE++ K D++SFGI E+ T
Sbjct: 168 SAF----LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELAT 222
Query: 1249 GEEPYANMHYGAIIGGIVNNTLRPPV--PGFCDSE--------WRLLMEQCWAPDPVVRP 1298
G PY ++ + N PP G D E +R ++ C DP RP
Sbjct: 223 GAAPYHKYPPMKVLMLTLQND--PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP 280
Query: 1299 SFTEIAR 1305
+ E+ R
Sbjct: 281 TAAELLR 287
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 126/273 (46%), Gaps = 38/273 (13%)
Query: 1050 LGSGTFGT-VYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVV 1108
LG G GT VY G + DVA+KRI CF+ E ++ RE++ HPNV+
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADRE-----VQLLRESD-----EHPNVI 81
Query: 1109 AFYGVVQDGPGGTLA------TVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
++ +D +A T+ E++ H+ L + + G+
Sbjct: 82 RYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEP---------ITLLQQTTSGLA 132
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPI-CKVGDFGLSK---IKRNTLV-TGGVRGTLPW 1217
+LHS NIVH DLK N+L+++ + I + DFGL K + R++ GV GT W
Sbjct: 133 HLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192
Query: 1218 MAPELLNGSSSK-VSEKVDVFSFGIVLWEILT-GEEPYAN---MHYGAIIGGIVNNTLRP 1272
+APE+L+ + + VD+FS G V + +++ G P+ ++G + L P
Sbjct: 193 IAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHP 252
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
D R L+E+ A DP RPS + +
Sbjct: 253 EKHE--DVIARELIEKMIAMDPQKRPSAKHVLK 283
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 132/283 (46%), Gaps = 36/283 (12%)
Query: 1048 KELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K++G G F VY G VA+K+++ + + + +E ++L +L+HP
Sbjct: 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI-----KEIDLLKQLNHP 92
Query: 1106 NVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-------IAMDA 1157
NV+ +Y ++D L V E G L ++ +H ++KRLI +
Sbjct: 93 NVIKYYASFIED---NELNIVLELADAGDLSRMI----KHFKKQKRLIPERTVWKYFVQL 145
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRNTLVTGGVRGTLP 1216
+E++HS+ ++H D+K N+ + + K+GD GL + T + GT
Sbjct: 146 CSALEHMHSRRVMHRDIKPANVFITATG----VVKLGDLGLGRFFSSKTTAAHSLVGTPY 201
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYA--NMHYGAIIGGIVNNTLRPPV 1274
+M+PE ++ + K D++S G +L+E+ + P+ M+ ++ I PP+
Sbjct: 202 YMSPERIHENGYNF--KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI-EQCDYPPL 258
Query: 1275 PG-FCDSEWRLLMEQCWAPDPVVRPSFT---EIARRLRVMSAA 1313
P E R L+ C PDP RP T ++A+R+ +A+
Sbjct: 259 PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 126/268 (47%), Gaps = 34/268 (12%)
Query: 1048 KELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G G F V + G +VA+K I K+ S ++ +RE I+ L+HP
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQK------LFREVRIMKILNHP 74
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLS----KERHLDRRKRLIIAMDAAFGM 1161
N+V + V++ TL V E+ G + L++ KE+ + R I++ +
Sbjct: 75 NIVKLFEVIETEK--TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AV 127
Query: 1162 EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTL----PW 1217
+Y H K IVH DLK +NLL++ I K+ DFG S N G T P+
Sbjct: 128 QYCHQKYIVHRDLKAENLLLDGDMNI----KIADFGFS----NEFTVGNKLDTFCGSPPY 179
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
APEL G E VDV+S G++L+ +++G P+ + + ++ R +P +
Sbjct: 180 AAPELFQGKKYDGPE-VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPFY 236
Query: 1278 CDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
++ L+++ +P+ R S +I +
Sbjct: 237 MSTDCENLLKKLLVLNPIKRGSLEQIMK 264
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 118/238 (49%), Gaps = 25/238 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+D E + LG G FG VY + + + VA+K + KS E+E + + RE EI
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKS-----QIEKEGVEHQLRREIEIQ 77
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+ LHHPN++ Y D + + E+ G L + L K D ++ I + A
Sbjct: 78 AHLHHPNILRLYNYFYDR--RRIYLILEYAPRGEL-YKELQKSCTFDEQRTATIMEELAD 134
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS----KIKRNTLVTGGVRGTL 1215
+ Y H K ++H D+K +NLL+ LK + K+ DFG S ++R T+ GTL
Sbjct: 135 ALMYCHGKKVIHRDIKPENLLLGLKGEL----KIADFGWSVHAPSLRRKTMC-----GTL 185
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
++ PE++ G +EKVD++ G++ +E+L G P+ + + IV L+ P
Sbjct: 186 DYLPPEMIEGRMH--NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFP 241
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 131/298 (43%), Gaps = 56/298 (18%)
Query: 1041 NEDLEELKE-LGSGTFGTVYHGKW--RGTDVAIKRIK-KSCFTGRSSEQERLTLEFWREA 1096
N D EL+E +GSG V + VAIKRI + C T E +E
Sbjct: 8 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD--------ELLKEI 59
Query: 1097 EILSKLHHPNVVAFYG--VVQDGPGGTLATVTEFMVNGS----LRHVLLSKERH---LDR 1147
+ +S+ HHPN+V++Y VV+D L V + + GS ++H++ E LD
Sbjct: 60 QAMSQCHHPNIVSYYTSFVVKD----ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 115
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLV 1207
I + G+EYLH +H D+K N+L+ ++ + DFG+S L
Sbjct: 116 STIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQ----IADFGVSAF----LA 167
Query: 1208 TGG------VR----GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMH 1257
TGG VR GT WMAPE++ K D++SFGI E+ TG PY
Sbjct: 168 TGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELATGAAPYHKYP 226
Query: 1258 YGAIIGGIVNNTLRPPV--PGFCDSE--------WRLLMEQCWAPDPVVRPSFTEIAR 1305
++ + N PP G D E +R ++ C DP RP+ E+ R
Sbjct: 227 PMKVLMLTLQND--PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 132/284 (46%), Gaps = 45/284 (15%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
D E ++ LG G FG V+ K + D AIKRI+ R +E++ RE + L+
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR---LPNRELAREKVM----REVKALA 58
Query: 1101 KLHHPNVVAFYGVVQD----------GPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKR 1150
KL HP +V ++ + P L + +L+ ++ ++ R+R
Sbjct: 59 KLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKD-WMNGRCTIEERER 117
Query: 1151 ---LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI-----K 1202
L I + A +E+LHSK ++H DLK N+ + D + KVGDFGL +
Sbjct: 118 SVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD----VVKVGDFGLVTAMDQDEE 173
Query: 1203 RNTLVT--------GGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYA 1254
T++T G GT +M+PE ++G+S S KVD+FS G++L+E+L P++
Sbjct: 174 EQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSY--SHKVDIFSLGLILFELLY---PFS 228
Query: 1255 NMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRP 1298
V N PP+ ++++ +P P+ RP
Sbjct: 229 TQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERP 272
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 47/272 (17%)
Query: 1044 LEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK 1101
++L++LG+GT+ TVY G K G VA+K +K G S R E ++ +
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR-------EISLMKE 59
Query: 1102 LHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHV----LLSKERHLDRRKRLIIAMDA 1157
L H N+V Y V+ L V EFM N +++ + + R L+
Sbjct: 60 LKHENIVRLYDVIHTE--NKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRGT 1214
G+ + H I+H DLK NLL+N + + K+GDFGL++ I NT + V T
Sbjct: 118 LQGLAFCHENKILHRDLKPQNLLINKRGQL----KLGDFGLARAFGIPVNTFSSEVV--T 171
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPV 1274
L + AP++L GS + S +D++S G +L E++TG +P
Sbjct: 172 LWYRAPDVLMGSRT-YSTSIDIWSCGCILAEMITG---------------------KPLF 209
Query: 1275 PGFCDSE-WRLLMEQCWAPDPVVRPSFTEIAR 1305
PG D E +L+ + P+ + PS T++ +
Sbjct: 210 PGTNDEEQLKLIFDIMGTPNESLWPSVTKLPK 241
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 109/213 (51%), Gaps = 20/213 (9%)
Query: 1042 EDLEELKELGSGTFGTVYHGK-WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
E ++L+++G GT+G VY K +G VA+KRI+ +E E + RE +L
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR------LDAEDEGIPSTAIREISLLK 74
Query: 1101 KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFG 1160
+LHHPN+V+ V+ TL V EFM L+ VL + L + I G
Sbjct: 75 ELHHPNIVSLIDVIHSERCLTL--VFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRGTLPW 1217
+ + H I+H DLK NLL+N + K+ DFGL++ I + V TL +
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGAL----KLADFGLARAFGIPVRSYTHEVV--TLWY 185
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
AP++L G S K S VD++S G + E++TG+
Sbjct: 186 RAPDVLMG-SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 109/213 (51%), Gaps = 20/213 (9%)
Query: 1042 EDLEELKELGSGTFGTVYHGK-WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
E ++L+++G GT+G VY K +G VA+KRI+ +E E + RE +L
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR------LDAEDEGIPSTAIREISLLK 74
Query: 1101 KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFG 1160
+LHHPN+V+ V+ TL V EFM L+ VL + L + I G
Sbjct: 75 ELHHPNIVSLIDVIHSERCLTL--VFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRGTLPW 1217
+ + H I+H DLK NLL+N + K+ DFGL++ I + V TL +
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGAL----KLADFGLARAFGIPVRSYTHEVV--TLWY 185
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
AP++L G S K S VD++S G + E++TG+
Sbjct: 186 RAPDVLMG-SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 1050 LGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG+G F V + + T VAIK I K G+ E E +L K+ HPN+
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMEN-------EIAVLHKIKHPNI 78
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR-RKRLII-AMDAAFGMEYLH 1165
VA + + G G L + + + G L ++ K + +R RLI +DA ++YLH
Sbjct: 79 VALDDIYESG--GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA---VKYLH 133
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
IVH DLK +NLL D I + DFGLSK++ V GT ++APE+L
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIM-ISDFGLSKMEDPGSVLSTACGTPGYVAPEVL-- 190
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
+ S+ VD +S G++ + +L G P+ +
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 125/261 (47%), Gaps = 25/261 (9%)
Query: 1044 LEELKELGSGTFGTVYHGKW-----RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E LK LG G+FG V+ + G A+K +KK+ R + ++ E +I
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM------ERDI 83
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L+ ++HP VV + Q G L + +F+ G L LSKE + A
Sbjct: 84 LADVNHPFVVKLHYAFQ--TEGKLYLILDFLRGGDL-FTRLSKEVMFTEEDVKFYLAELA 140
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IKRNTLVTGGVRGTLP 1216
G+++LHS I++ DLK +N+L++ + I K+ DFGLSK I GT+
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLDEEGHI----KLTDFGLSKEAIDHEKKAYSFC-GTVE 195
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPG 1276
+MAPE++N S D +S+G++++E+LTG P+ + I+ L +P
Sbjct: 196 YMAPEVVNRQGH--SHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKL--GMPQ 251
Query: 1277 FCDSEWRLLMEQCWAPDPVVR 1297
F +E + L+ + +P R
Sbjct: 252 FLSTEAQSLLRALFKRNPANR 272
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine
At 2a Resolution
Length = 345
Score = 84.3 bits (207), Expect = 4e-16, Method: Composition-based stats.
Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 25/275 (9%)
Query: 1030 NFDISTLQI-IKNEDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQE 1086
N + +LQI +K ED K LG G+FG V+ +++ T+ AIK +KK +
Sbjct: 4 NKERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVEC 63
Query: 1087 RLTLEFWREAEILS-KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHL 1145
+ E +LS HP + + Q L V E++ G L + + S +
Sbjct: 64 TMV-----EKRVLSLAWEHPFLTHMFCTFQTKE--NLFFVMEYLNGGDLMYHIQSCHK-F 115
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
D + A + G+++LHSK IV+ DLK DN+L++ I K+ DFG+ K N
Sbjct: 116 DLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHI----KIADFGMC--KENM 169
Query: 1206 L---VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
L T GT ++APE+L G K + VD +SFG++L+E+L G+ P+ +
Sbjct: 170 LGDAKTNXFCGTPDYIAPEILLG--QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 227
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVR 1297
I + P P + + E + L+ + + +P R
Sbjct: 228 HSIRMDN--PFYPRWLEKEAKDLLVKLFVREPEKR 260
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 1050 LGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG+G F V + + T VAIK I K G+ E E +L K+ HPN+
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN-------EIAVLHKIKHPNI 78
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR-RKRLII-AMDAAFGMEYLH 1165
VA + + GG L + + + G L ++ K + +R RLI +DA ++YLH
Sbjct: 79 VALDDIYE--SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA---VKYLH 133
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
IVH DLK +NLL D I + DFGLSK++ V GT ++APE+L
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKI-MISDFGLSKMEDPGSVLSTACGTPGYVAPEVL-- 190
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
+ S+ VD +S G++ + +L G P+ +
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 126/261 (48%), Gaps = 25/261 (9%)
Query: 1044 LEELKELGSGTFGTVYH-GKWRGTDV----AIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E LK LG G+FG V+ K G+D A+K +KK+ R + ++ E +I
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM------ERDI 79
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L +++HP +V + Q G L + +F+ G L LSKE + A
Sbjct: 80 LVEVNHPFIVKLHYAFQTE--GKLYLILDFLRGGDL-FTRLSKEVMFTEEDVKFYLAELA 136
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IKRNTLVTGGVRGTLP 1216
+++LHS I++ DLK +N+L++ + I K+ DFGLSK I GT+
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHI----KLTDFGLSKESIDHEKKAYSFC-GTVE 191
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPG 1276
+MAPE++N ++ D +SFG++++E+LTG P+ + I+ L +P
Sbjct: 192 YMAPEVVNRRGH--TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL--GMPQ 247
Query: 1277 FCDSEWRLLMEQCWAPDPVVR 1297
F E + L+ + +P R
Sbjct: 248 FLSPEAQSLLRMLFKRNPANR 268
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 1050 LGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG+G F V + + T VAIK I K G+ E E +L K+ HPN+
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN-------EIAVLHKIKHPNI 78
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR-RKRLII-AMDAAFGMEYLH 1165
VA + + GG L + + + G L ++ K + +R RLI +DA ++YLH
Sbjct: 79 VALDDIYE--SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA---VKYLH 133
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
IVH DLK +NLL D I + DFGLSK++ V GT ++APE+L
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIM-ISDFGLSKMEDPGSVLSTACGTPGYVAPEVL-- 190
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
+ S+ VD +S G++ + +L G P+ +
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 1050 LGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG+G F V + + T VAIK I K G+ E E +L K+ HPN+
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN-------EIAVLHKIKHPNI 78
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR-RKRLII-AMDAAFGMEYLH 1165
VA + + GG L + + + G L ++ K + +R RLI +DA ++YLH
Sbjct: 79 VALDDIYE--SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA---VKYLH 133
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
IVH DLK +NLL D I + DFGLSK++ V GT ++APE+L
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIM-ISDFGLSKMEDPGSVLSTACGTPGYVAPEVL-- 190
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
+ S+ VD +S G++ + +L G P+ +
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122)
Length = 677
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 110/220 (50%), Gaps = 25/220 (11%)
Query: 1046 ELKE-LGSGTFGTVYHGKW----RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
E+KE LG+G FG V +W G VAIK+ ++ +ER LE +I+
Sbjct: 18 EMKERLGTGGFGYVL--RWIHQDTGEQVAIKQCRQEL---SPKNRERWCLEI----QIMK 68
Query: 1101 KLHHPNVVAFY----GVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAM- 1155
KL+HPNVV+ G+ + P E+ G LR L E ++ I +
Sbjct: 69 KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL 128
Query: 1156 -DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRNTLVTGGVRG 1213
D + + YLH I+H DLK +N+++ P R I K+ D G +K + + L T V G
Sbjct: 129 SDISSALRYLHENRIIHRDLKPENIVLQ-PGPQRLIHKIIDLGYAKELDQGELCTEFV-G 186
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
TL ++APELL V+ VD +SFG + +E +TG P+
Sbjct: 187 TLQYLAPELLEQKKYTVT--VDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 110/220 (50%), Gaps = 25/220 (11%)
Query: 1046 ELKE-LGSGTFGTVYHGKW----RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
E+KE LG+G FG V +W G VAIK+ ++ +ER LE +I+
Sbjct: 17 EMKERLGTGGFGYVL--RWIHQDTGEQVAIKQCRQEL---SPKNRERWCLEI----QIMK 67
Query: 1101 KLHHPNVVAFY----GVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAM- 1155
KL+HPNVV+ G+ + P E+ G LR L E ++ I +
Sbjct: 68 KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL 127
Query: 1156 -DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRNTLVTGGVRG 1213
D + + YLH I+H DLK +N+++ P R I K+ D G +K + + L T V G
Sbjct: 128 SDISSALRYLHENRIIHRDLKPENIVLQ-PGPQRLIHKIIDLGYAKELDQGELCTEFV-G 185
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
TL ++APELL V+ VD +SFG + +E +TG P+
Sbjct: 186 TLQYLAPELLEQKKYTVT--VDYWSFGTLAFECITGFRPF 223
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 113/224 (50%), Gaps = 10/224 (4%)
Query: 1033 ISTLQIIKNEDLEEL-KELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLT 1089
+ T + K ED ++ +ELGSG F V + + G + A K IKK R+S +
Sbjct: 2 METFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKR--QSRASRRGVCR 59
Query: 1090 LEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRK 1149
E RE IL ++ HPN++ + V ++ L + E + G L L KE L +
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVL--ILELVSGGELFDFLAQKE-SLSEEE 116
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
G+ YLH+K I HFDLK +N+++ K+ P K+ DFGL+ + +
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ GT ++APE++N + + D++S G++ + +L+G P+
Sbjct: 177 NIFGTPEFVAPEIVN--YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 128/270 (47%), Gaps = 35/270 (12%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE-FWREAEILSKLHHPN 1106
++LGSG FG V+ + R + ++R+ K+ RS ++ +E E E+L L HPN
Sbjct: 28 RKLGSGAFGDVHLVEERSS--GLERVIKTINKDRS----QVPMEQIEAEIEVLKSLDHPN 81
Query: 1107 VVAFYGVVQDGPGGTLATVT-------EFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ + V +D + T E +V+ R LS+ + K+++ A+
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNAL---- 137
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
Y HS+++VH DLK +N+L P PI K+ DFGL+++ ++ + GT +MA
Sbjct: 138 --AYFHSQHVVHKDLKPENILFQDTSPHSPI-KIIDFGLAELFKSDEHSTNAAGTALYMA 194
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNN------TLRPP 1273
PE+ V+ K D++S G+V++ +LTG P+ + RP
Sbjct: 195 PEVFK---RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPL 251
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
P D L++Q DP RPS ++
Sbjct: 252 TPQAVD-----LLKQMLTKDPERRPSAAQV 276
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo)
Length = 271
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 111/268 (41%), Gaps = 14/268 (5%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
I + L L +L G ++ G+W+G D+ +K +K ++ R S +F E
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSR------DFNEECPR 60
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH-LDRRKRLIIAMDA 1157
L HPNV+ G Q P +T + GSL +VL +D+ + + A+D
Sbjct: 61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDX 120
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPW 1217
A G +LH+ + ++ V + + D S + G W
Sbjct: 121 ARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFS------FQSPGRXYAPAW 174
Query: 1218 MAPELLNGSSSKVSEK-VDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPG 1276
+APE L + + D +SF ++LWE++T E P+A++ I + LRP +P
Sbjct: 175 VAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPP 234
Query: 1277 FCDSEWRLLMEQCWAPDPVVRPSFTEIA 1304
L + C DP RP F I
Sbjct: 235 GISPHVSKLXKICXNEDPAKRPKFDXIV 262
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With Flavonoid
Glycoside Quercitrin
Length = 305
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 126/261 (48%), Gaps = 25/261 (9%)
Query: 1044 LEELKELGSGTFGTVYH-GKWRGTDV----AIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E LK LG G+FG V+ K G+D A+K +KK+ R + ++ E +I
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM------ERDI 80
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L +++HP +V + Q G L + +F+ G L LSKE + A
Sbjct: 81 LVEVNHPFIVKLHYAFQTE--GKLYLILDFLRGGDL-FTRLSKEVMFTEEDVKFYLAELA 137
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IKRNTLVTGGVRGTLP 1216
+++LHS I++ DLK +N+L++ + I K+ DFGLSK I GT+
Sbjct: 138 LALDHLHSLGIIYRDLKPENILLDEEGHI----KLTDFGLSKESIDHEKKAYSFC-GTVE 192
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPG 1276
+MAPE++N ++ D +SFG++++E+LTG P+ + I+ L +P
Sbjct: 193 YMAPEVVNRRGH--TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL--GMPQ 248
Query: 1277 FCDSEWRLLMEQCWAPDPVVR 1297
F E + L+ + +P R
Sbjct: 249 FLSPEAQSLLRMLFKRNPANR 269
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1)
Length = 294
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 31/272 (11%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E +L +G G+FG VY G T VAIK I + ++ E +L
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQ-------EITVL 71
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+ P + ++G L + E++ GS +L K L+ I +
Sbjct: 72 SQCDSPYITRYFGSYLKS--TKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILK 127
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL------SKIKRNTLVTGGVRG 1213
G++YLHS+ +H D+K N+L++ + + K+ DFG+ ++IKRN V G
Sbjct: 128 GLDYLHSERKIHRDIKAANVLLSEQGDV----KLADFGVAGQLTDTQIKRNXFV-----G 178
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
T WMAPE++ S+ K D++S GI E+ GE P +++H ++ I N+ P
Sbjct: 179 TPFWMAPEVIKQSAYDF--KADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS-PPT 235
Query: 1274 VPGFCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
+ G ++ +E C DP RP+ E+ +
Sbjct: 236 LEGQHSKPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 55/295 (18%)
Query: 1043 DLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
D +E++ +GSG FG V+ K R G IKR+K + +E RE + L+
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVK---YNNEKAE---------REVKALA 59
Query: 1101 KLHHPNVVAFYGVVQDG---------------PGGTLATVTEFMVNGSLRHVLLSKER-- 1143
KL H N+V + G DG L EF G+L + K R
Sbjct: 60 KLDHVNIVHYNGC-WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQ-WIEKRRGE 117
Query: 1144 HLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNL-LVNLKDPIRPICKVGDFGLSKIK 1202
LD+ L + G++Y+HSK +++ DLK N+ LV+ K K+GDFGL
Sbjct: 118 KLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ-----VKIGDFGLVTSL 172
Query: 1203 RNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEIL----TGEEPYANMHY 1258
+N +GTL +M+PE + SS ++VD+++ G++L E+L T E + +
Sbjct: 173 KNDGKRXRSKGTLRYMSPEQI--SSQDYGKEVDLYALGLILAELLHVCDTAFE--TSKFF 228
Query: 1259 GAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAA 1313
+ GI+++ D + + L+++ + P RP+ +EI R L V +
Sbjct: 229 TDLRDGIISDIF--------DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 126/261 (48%), Gaps = 25/261 (9%)
Query: 1044 LEELKELGSGTFGTVYH-GKWRGTDV----AIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E LK LG G+FG V+ K G+D A+K +KK+ R + ++ E +I
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM------ERDI 79
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L +++HP +V + Q G L + +F+ G L LSKE + A
Sbjct: 80 LVEVNHPFIVKLHYAFQTE--GKLYLILDFLRGGDL-FTRLSKEVMFTEEDVKFYLAELA 136
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IKRNTLVTGGVRGTLP 1216
+++LHS I++ DLK +N+L++ + I K+ DFGLSK I GT+
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHI----KLTDFGLSKESIDHEKKAYSFC-GTVE 191
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPG 1276
+MAPE++N ++ D +SFG++++E+LTG P+ + I+ L +P
Sbjct: 192 YMAPEVVNRRGH--TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL--GMPQ 247
Query: 1277 FCDSEWRLLMEQCWAPDPVVR 1297
F E + L+ + +P R
Sbjct: 248 FLSPEAQSLLRMLFKRNPANR 268
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 13/224 (5%)
Query: 1036 LQIIKNEDLEEL----KELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLT 1089
+ + ED+E+ +ELGSG F V + +GT + A K IKK + R
Sbjct: 2 MSTFRQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREE 61
Query: 1090 LEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRK 1149
+E RE IL ++ HPN++ + + ++ L + E + G L L KE L +
Sbjct: 62 IE--REVNILREIRHPNIITLHDIFENKTDVVL--ILELVSGGELFDFLAEKES-LTEDE 116
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
G+ YLHSK I HFDLK +N+++ K+ P K+ DFG++
Sbjct: 117 ATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK 176
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ GT ++APE++N + + D++S G++ + +L+G P+
Sbjct: 177 NIFGTPEFVAPEIVN--YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 9/208 (4%)
Query: 1048 KELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
+ELGSG F V + +GT + A K IKK + R +E RE IL ++ HP
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE--REVNILREIRHP 68
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
N++ + + ++ L + E + G L L KE L + G+ YLH
Sbjct: 69 NIITLHDIFENKTDVVL--ILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH 125
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
SK I HFDLK +N+++ K+ P K+ DFG++ + GT ++APE++N
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN- 184
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + D++S G++ + +L+G P+
Sbjct: 185 -YEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRN--TLVTGG 1210
+ A GME+L S+ +H DL N+L++ + + K+ DFGL++ I +N + G
Sbjct: 205 SFQVARGMEFLSSRKCIHRDLAARNILLSENN----VVKICDFGLARDIYKNPDYVRKGD 260
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIVNNT 1269
R L WMAPE + S K DV+S+G++LWEI + G PY + +
Sbjct: 261 TRLPLKWMAPESI--FDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREG 318
Query: 1270 LRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+R P + E +M CW DP RP F E+ +L
Sbjct: 319 MRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 26/211 (12%)
Query: 1049 ELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPN 1106
ELG G VY K +GT A+K +KK+ +++ E +L +L HPN
Sbjct: 60 ELGRGATSIVYRCKQKGTQKPYALKVLKKTV-------DKKIVRT---EIGVLLRLSHPN 109
Query: 1107 VVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF----GME 1162
++ + + ++ V E + G L ++ K + +R A DA +
Sbjct: 110 IIKLKEIFETPT--EISLVLELVTGGELFDRIVEKGYYSERD-----AADAVKQILEAVA 162
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPEL 1222
YLH IVH DLK +NLL P P+ K+ DFGLSKI + ++ V GT + APE+
Sbjct: 163 YLHENGIVHRDLKPENLLYATPAPDAPL-KIADFGLSKIVEHQVLMKTVCGTPGYCAPEI 221
Query: 1223 LNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
L G + +VD++S GI+ + +L G EP+
Sbjct: 222 LRGCAY--GPEVDMWSVGIITYILLCGFEPF 250
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 1024 VDLALGNFDISTLQIIKNEDLEEL-KELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTG 1080
VDL N ++ ED E+ +ELGSG F V + +GT + A K IKK
Sbjct: 11 VDLGTENLYFQSMV----EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXS 66
Query: 1081 RSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLS 1140
R +E RE IL ++ HPN++ + + ++ L + E + G L L
Sbjct: 67 SRRGVSREEIE--REVNILREIRHPNIITLHDIFENKTDVVL--ILELVSGGELFDFLAE 122
Query: 1141 KERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK 1200
KE L + G+ YLHSK I HFDLK +N+++ K+ P K+ DFG++
Sbjct: 123 KE-SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 181
Query: 1201 IKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ GT ++APE++N + + D++S G++ + +L+G P+
Sbjct: 182 KIEAGNEFKNIFGTPEFVAPEIVN--YEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 111/249 (44%), Gaps = 30/249 (12%)
Query: 1053 GTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVV---- 1108
G FG VY + + T V + + SE+E ++ E +IL+ HPN+V
Sbjct: 21 GDFGKVYKAQNKETSV----LAAAKVIDTKSEEE--LEDYMVEIDILASCDHPNIVKLLD 74
Query: 1109 AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKN 1168
AFY L + EF G++ V+L ER L + ++ + YLH
Sbjct: 75 AFYY------ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 128
Query: 1169 IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVRGTLPWMAPELLNGS 1226
I+H DLK N+L L I K+ DFG+S T + GT WMAPE++
Sbjct: 129 IIHRDLKAGNILFTLDGDI----KLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCE 184
Query: 1227 SSK---VSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPV---PGFCDS 1280
+SK K DV+S GI L E+ E P+ ++ ++ I + PP P S
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS--EPPTLAQPSRWSS 242
Query: 1281 EWRLLMEQC 1289
++ +++C
Sbjct: 243 NFKDFLKKC 251
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 35/235 (14%)
Query: 1050 LGSGTFGTVYH--GKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS--KLHHP 1105
LG G+FG V+ K G A+K+++ LE +R E+++ L P
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------------LEVFRAEELMACAGLTSP 145
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
+V YG V++GP + E + GSL L+ ++ L + L A G+EYLH
Sbjct: 146 RIVPLYGAVREGP--WVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYYLGQALEGLEYLH 202
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR-----NTLVTGG-VRGTLPWMA 1219
S+ I+H D+K DN+L++ +C DFG + + +L+TG + GT MA
Sbjct: 203 SRRILHGDVKADNVLLSSDGSHAALC---DFGHAVCLQPDGLGKSLLTGDYIPGTETHMA 259
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPV 1274
PE++ G S KVDV+S ++ +L G P+ G + I + PPV
Sbjct: 260 PEVVLGRSCDA--KVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEP--PPV 310
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 68/308 (22%)
Query: 1043 DLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
D +E++ +GSG FG V+ K R G I+R+K + +E RE + L+
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVK---YNNEKAE---------REVKALA 60
Query: 1101 KLHHPNVVAFYGVVQDG----------------------------PGGTLATVTEFMVNG 1132
KL H N+V + G DG L EF G
Sbjct: 61 KLDHVNIVHYNGC-WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKG 119
Query: 1133 SLRHVLLSKER--HLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNL-LVNLKDPIRP 1189
+L + K R LD+ L + G++Y+HSK ++H DLK N+ LV+ K
Sbjct: 120 TLEQ-WIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQ---- 174
Query: 1190 ICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEIL-- 1247
K+GDFGL +N +GTL +M+PE + SS ++VD+++ G++L E+L
Sbjct: 175 -VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQI--SSQDYGKEVDLYALGLILAELLHV 231
Query: 1248 --TGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIAR 1305
T E + + + GI+++ D + + L+++ + P RP+ +EI R
Sbjct: 232 CDTAFE--TSKFFTDLRDGIISDIF--------DKKEKTLLQKLLSKKPEDRPNTSEILR 281
Query: 1306 RLRVMSAA 1313
L V +
Sbjct: 282 TLTVWKKS 289
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 18/236 (7%)
Query: 1040 KNEDLEELKELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
K D LK +G G+FG V + + +V A+K ++K + E+ ++
Sbjct: 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMS----ERNV 91
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
+L + HP +V + Q L V +++ G L + L + L+ R R A +
Sbjct: 92 LLKNVKHPFLVGLHFSFQTA--DKLYFVLDYINGGELFYHLQRERCFLEPRARFY-AAEI 148
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IKRNTLVTGGVRGTL 1215
A + YLHS NIV+ DLK +N+L++ + I + DFGL K I+ N+ T GT
Sbjct: 149 ASALGYLHSLNIVYRDLKPENILLDSQGHIV----LTDFGLCKENIEHNS-TTSTFCGTP 203
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLR 1271
++APE+L+ VD + G VL+E+L G P+ + + + I+N L+
Sbjct: 204 EYLAPEVLH--KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQ 257
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 118/259 (45%), Gaps = 20/259 (7%)
Query: 1050 LGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G+FG V T VA+K I + ++ + + RE L L HP++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLL-----KKSDMHMRVEREISYLKLLRHPHI 71
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHL-DRRKRLIIAMDAAFGMEYLHS 1166
+ Y V+ + V E+ G L ++ K+R D +R + A +EY H
Sbjct: 72 IKLYDVITTPTD--IVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICA--IEYCHR 126
Query: 1167 KNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGS 1226
IVH DLK +NLL L D + K+ DFGLS I + G+ + APE++NG
Sbjct: 127 HKIVHRDLKPENLL--LDDNLN--VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGK 182
Query: 1227 SSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLM 1286
E VDV+S GIVL+ +L G P+ + + + N+ +P F + L+
Sbjct: 183 LYAGPE-VDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV--NSCVYVMPDFLSPGAQSLI 239
Query: 1287 EQCWAPDPVVRPSFTEIAR 1305
+ DP+ R + EI R
Sbjct: 240 RRMIVADPMQRITIQEIRR 258
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 20/273 (7%)
Query: 1040 KNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ ED E L +G+G++G + R +D I + K G +E E+ L E +L
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIR-RKSDGKI-LVWKELDYGSMTEAEKQMLV--SEVNLL 59
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLL--SKER-HLDRRKRLIIAMD 1156
+L HPN+V +Y + D TL V E+ G L V+ +KER +LD L +
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 1157 AAFGMEYLHSKN-----IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI-KRNTLVTGG 1210
++ H ++ ++H DLK N+ ++ K + K+GDFGL++I +T
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNV----KLGDFGLARILNHDTSFAKA 175
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
GT +M+PE +N S +EK D++S G +L+E+ P+ + G I
Sbjct: 176 FVGTPYYMSPEQMNRMS--YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF 233
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R +P E ++ + RPS EI
Sbjct: 234 R-RIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) With
Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) With
Inhibitor
Length = 350
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 137/293 (46%), Gaps = 36/293 (12%)
Query: 1024 VDLALGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGR 1081
VDL N ++ E L+++G G+FG K G IK I S + +
Sbjct: 11 VDLGTENLYFQSM-----EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK 65
Query: 1082 SSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSL------- 1134
E+ R RE +L+ + HPN+V + ++ G+L V ++ G L
Sbjct: 66 EREESR------REVAVLANMKHPNIVQYRESFEE--NGSLYIVMDYCEGGDLFKRINAQ 117
Query: 1135 RHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVG 1194
+ VL +++ LD ++ +A ++++H + I+H D+K N+ + + ++G
Sbjct: 118 KGVLFQEDQILDWFVQICLA------LKHVHDRKILHRDIKSQNIFLTKDGTV----QLG 167
Query: 1195 DFGLSKIKRNTL-VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
DFG++++ +T+ + GT +++PE+ + + K D+++ G VL+E+ T + +
Sbjct: 168 DFGIARVLNSTVELARACIGTPYYLSPEICE--NKPYNNKSDIWALGCVLYELCTLKHAF 225
Query: 1254 ANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARR 1306
++ I++ + PPV + R L+ Q + +P RPS I +
Sbjct: 226 EAGSMKNLVLKIISGSF-PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 23/257 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYH-----GKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFW 1093
I+ E E L+ LG G +G V+ G G A+K +KK+ + + T
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKD----TAHTK 69
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
E IL ++ HP +V Q G G L + E++ G L + L +E
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTG--GKLYLILEYLSGGEL-FMQLEREGIFMEDTACFY 126
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IKRNTLVTGGV 1211
+ + + +LH K I++ DLK +N+++N + + K+ DFGL K I T VT
Sbjct: 127 LAEISMALGHLHQKGIIYRDLKPENIMLNHQGHV----KLTDFGLCKESIHDGT-VTHTF 181
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLR 1271
GT+ +MAPE+L S + VD +S G +++++LTG P+ + I I+ L
Sbjct: 182 CGTIEYMAPEILMRSGH--NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 1272 PPVPGFCDSEWRLLMEQ 1288
+P + E R L+++
Sbjct: 240 --LPPYLTQEARDLLKK 254
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 23/257 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYH-----GKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFW 1093
I+ E E L+ LG G +G V+ G G A+K +KK+ + + T
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKD----TAHTK 69
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
E IL ++ HP +V Q G G L + E++ G L + L +E
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTG--GKLYLILEYLSGGEL-FMQLEREGIFMEDTACFY 126
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IKRNTLVTGGV 1211
+ + + +LH K I++ DLK +N+++N + + K+ DFGL K I T VT
Sbjct: 127 LAEISMALGHLHQKGIIYRDLKPENIMLNHQGHV----KLTDFGLCKESIHDGT-VTHXF 181
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLR 1271
GT+ +MAPE+L S + VD +S G +++++LTG P+ + I I+ L
Sbjct: 182 CGTIEYMAPEILMRSGH--NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 1272 PPVPGFCDSEWRLLMEQ 1288
+P + E R L+++
Sbjct: 240 --LPPYLTQEARDLLKK 254
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 110/235 (46%), Gaps = 35/235 (14%)
Query: 1050 LGSGTFGTVYH--GKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS--KLHHP 1105
LG G+FG V+ K G A+K+++ LE +R E+++ L P
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------------LEVFRAEELMACAGLTSP 126
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
+V YG V++GP + E + GSL L+ ++ L + L A G+EYLH
Sbjct: 127 RIVPLYGAVREGP--WVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYYLGQALEGLEYLH 183
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS------KIKRNTLVTGGVRGTLPWMA 1219
S+ I+H D+K DN+L++ +C DFG + + ++ L + GT MA
Sbjct: 184 SRRILHGDVKADNVLLSSDGSHAALC---DFGHAVCLQPDGLGKDLLTGDYIPGTETHMA 240
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPV 1274
PE++ G S KVDV+S ++ +L G P+ G + I + PPV
Sbjct: 241 PEVVLGRSCDA--KVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEP--PPV 291
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 80.1 bits (196), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 37/220 (16%)
Query: 1047 LKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+++G G GTVY G +VAI+++ + ++ L + E ++ + +
Sbjct: 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNL-----QQQPKKELII---NEILVMRENKN 76
Query: 1105 PNVVAF---YGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
PN+V + Y V G L V E++ GSL V+ E +D + + + +
Sbjct: 77 PNIVNYLDSYLV-----GDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQAL 129
Query: 1162 EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS------KIKRNTLVTGGVRGTL 1215
E+LHS ++H D+K DN+L+ + + K+ DFG + KR+T+V GT
Sbjct: 130 EFLHSNQVIHRDIKSDNILLGMDGSV----KLTDFGFCAQITPEQSKRSTMV-----GTP 180
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
WMAPE++ + KVD++S GI+ E++ GE PY N
Sbjct: 181 YWMAPEVV--TRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide
And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide
And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 107/236 (45%), Gaps = 20/236 (8%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
+ E LK LG GTFG V K + T A+K +KK + LT E +L
Sbjct: 11 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT-----ENRVLQ 65
Query: 1101 KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFG 1160
HP + A Q L V E+ NG LS+ER + +
Sbjct: 66 NSRHPFLTALKYSFQ--THDRLCFVMEY-ANGGELFFHLSRERVFSEDRARFYGAEIVSA 122
Query: 1161 MEYLHS-KNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IKRNTLVTGGVRGTLPW 1217
++YLHS KN+V+ DLK +NL+++ I K+ DFGL K IK + GT +
Sbjct: 123 LDYLHSEKNVVYRDLKLENLMLDKDGHI----KITDFGLCKEGIKDGATMKXFC-GTPEY 177
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
+APE+L + VD + G+V++E++ G P+ N + + I+ +R P
Sbjct: 178 LAPEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 231
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 109/217 (50%), Gaps = 10/217 (4%)
Query: 1040 KNEDLEEL-KELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
K ED ++ +ELGSG F V + + G + A K IKK R+S + E RE
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKR--QSRASRRGVSREEIEREV 66
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
IL ++ H NV+ + V ++ L + E + G L L KE L +
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVL--ILELVSGGELFDFLAQKES-LSEEEATSFIKQ 123
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLP 1216
G+ YLH+K I HFDLK +N+++ K+ P K+ DFGL+ + + + GT
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
++APE++N + + D++S G++ + +L+G P+
Sbjct: 184 FVAPEIVN--YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 8/210 (3%)
Query: 1048 KELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K LGSG G V R T VAIK I K F S+ + L E EIL KL+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
++ V E M G L ++ +R + +L ++YLH
Sbjct: 76 CIIKIKNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLH 131
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPE-LLN 1224
I+H DLK +N+L++ ++ + K+ DFG SKI T + + GT ++APE L++
Sbjct: 132 ENGIIHRDLKPENVLLSSQEE-DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 190
Query: 1225 GSSSKVSEKVDVFSFGIVLWEILTGEEPYA 1254
++ + VD +S G++L+ L+G P++
Sbjct: 191 VGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 20/273 (7%)
Query: 1040 KNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ ED E L +G+G++G + R +D I + K G +E E+ L E +L
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIR-RKSDGKI-LVWKELDYGSMTEAEKQMLV--SEVNLL 59
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLL--SKER-HLDRRKRLIIAMD 1156
+L HPN+V +Y + D TL V E+ G L V+ +KER +LD L +
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 1157 AAFGMEYLHSKN-----IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI-KRNTLVTGG 1210
++ H ++ ++H DLK N+ ++ K + K+GDFGL++I +T
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNV----KLGDFGLARILNHDTSFAKT 175
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
GT +M+PE +N S +EK D++S G +L+E+ P+ + G I
Sbjct: 176 FVGTPYYMSPEQMNRMS--YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF 233
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R +P E ++ + RPS EI
Sbjct: 234 R-RIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound To
The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 8/210 (3%)
Query: 1048 KELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K LGSG G V R T VAIK I K F S+ + L E EIL KL+HP
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 81
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
++ V E M G L ++ +R + +L ++YLH
Sbjct: 82 CIIKIKNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLH 137
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPE-LLN 1224
I+H DLK +N+L++ ++ + K+ DFG SKI T + + GT ++APE L++
Sbjct: 138 ENGIIHRDLKPENVLLSSQEE-DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 196
Query: 1225 GSSSKVSEKVDVFSFGIVLWEILTGEEPYA 1254
++ + VD +S G++L+ L+G P++
Sbjct: 197 VGTAGYNRAVDCWSLGVILFICLSGYPPFS 226
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 107/236 (45%), Gaps = 20/236 (8%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
+ E LK LG GTFG V K + T A+K +KK + LT E +L
Sbjct: 10 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT-----ENRVLQ 64
Query: 1101 KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFG 1160
HP + A Q L V E+ NG LS+ER + +
Sbjct: 65 NSRHPFLTALKYSFQ--THDRLCFVMEY-ANGGELFFHLSRERVFSEDRARFYGAEIVSA 121
Query: 1161 MEYLHS-KNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IKRNTLVTGGVRGTLPW 1217
++YLHS KN+V+ DLK +NL+++ I K+ DFGL K IK + GT +
Sbjct: 122 LDYLHSEKNVVYRDLKLENLMLDKDGHI----KITDFGLCKEGIKDGATMKXFC-GTPEY 176
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
+APE+L + VD + G+V++E++ G P+ N + + I+ +R P
Sbjct: 177 LAPEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 230
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex
With Inhibitor Pv1533
Length = 322
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 8/210 (3%)
Query: 1048 KELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K LGSG G V R T VAIK I K F S+ + L E EIL KL+HP
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 74
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
++ V E M G L ++ +R + +L ++YLH
Sbjct: 75 CIIKIKNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLH 130
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPE-LLN 1224
I+H DLK +N+L++ ++ + K+ DFG SKI T + + GT ++APE L++
Sbjct: 131 ENGIIHRDLKPENVLLSSQEE-DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 189
Query: 1225 GSSSKVSEKVDVFSFGIVLWEILTGEEPYA 1254
++ + VD +S G++L+ L+G P++
Sbjct: 190 VGTAGYNRAVDCWSLGVILFICLSGYPPFS 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And Potentiation
Of Cytotoxic Drugs By Novel Chk2 Inhibitor Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 8/210 (3%)
Query: 1048 KELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K LGSG G V R T VAIK I K F S+ + L E EIL KL+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
++ V E M G L ++ +R + +L ++YLH
Sbjct: 76 CIIKIKNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLH 131
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPE-LLN 1224
I+H DLK +N+L++ ++ + K+ DFG SKI T + + GT ++APE L++
Sbjct: 132 ENGIIHRDLKPENVLLSSQEE-DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 190
Query: 1225 GSSSKVSEKVDVFSFGIVLWEILTGEEPYA 1254
++ + VD +S G++L+ L+G P++
Sbjct: 191 VGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 107/236 (45%), Gaps = 20/236 (8%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
+ E LK LG GTFG V K + T A+K +KK + LT E +L
Sbjct: 9 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT-----ENRVLQ 63
Query: 1101 KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFG 1160
HP + A Q L V E+ NG LS+ER + +
Sbjct: 64 NSRHPFLTALKYSFQ--THDRLCFVMEY-ANGGELFFHLSRERVFSEDRARFYGAEIVSA 120
Query: 1161 MEYLHS-KNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IKRNTLVTGGVRGTLPW 1217
++YLHS KN+V+ DLK +NL+++ I K+ DFGL K IK + GT +
Sbjct: 121 LDYLHSEKNVVYRDLKLENLMLDKDGHI----KITDFGLCKEGIKDGATMKXFC-GTPEY 175
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
+APE+L + VD + G+V++E++ G P+ N + + I+ +R P
Sbjct: 176 LAPEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 229
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor
Length = 446
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 107/236 (45%), Gaps = 20/236 (8%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
+ E LK LG GTFG V K + T A+K +KK + LT E +L
Sbjct: 152 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT-----ENRVLQ 206
Query: 1101 KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFG 1160
HP + A Q L V E+ NG LS+ER + +
Sbjct: 207 NSRHPFLTALKYSFQ--THDRLCFVMEY-ANGGELFFHLSRERVFSEDRARFYGAEIVSA 263
Query: 1161 MEYLHS-KNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IKRNTLVTGGVRGTLPW 1217
++YLHS KN+V+ DLK +NL+++ I K+ DFGL K IK + GT +
Sbjct: 264 LDYLHSEKNVVYRDLKLENLMLDKDGHI----KITDFGLCKEGIKDGATMKTFC-GTPEY 318
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
+APE+L + VD + G+V++E++ G P+ N + + I+ +R P
Sbjct: 319 LAPEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 372
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 109/217 (50%), Gaps = 10/217 (4%)
Query: 1040 KNEDLEEL-KELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
K ED ++ +ELGSG F V + + G + A K IKK R+S + E RE
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKR--QSRASRRGVSREEIEREV 66
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
IL ++ H NV+ + V ++ L + E + G L L KE L +
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVL--ILELVSGGELFDFLAQKE-SLSEEEATSFIKQ 123
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLP 1216
G+ YLH+K I HFDLK +N+++ K+ P K+ DFGL+ + + + GT
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
++APE++N + + D++S G++ + +L+G P+
Sbjct: 184 FVAPEIVN--YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 16/192 (8%)
Query: 1067 DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQ-DGPGGTLATV 1125
DVA+K ++ + L F REA+ + L+HP +VA Y + + P G L +
Sbjct: 56 DVAVKVLRADL-----ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 110
Query: 1126 TEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKD 1185
V+G ++ E + ++ + + DA + + H I+H D+K N++++ +
Sbjct: 111 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN 170
Query: 1186 PIRPICKVGDFGLSKIKRNT----LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGI 1241
+ KV DFG+++ ++ T V GT +++PE G S V + DV+S G
Sbjct: 171 AV----KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS--VDARSDVYSLGC 224
Query: 1242 VLWEILTGEEPY 1253
VL+E+LTGE P+
Sbjct: 225 VLYEVLTGEPPF 236
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 27/225 (12%)
Query: 1042 EDLEELKELGSGTFGTVY-----HGKWRGTDVAIKRIKKSCF-----TGRSSEQERLTLE 1091
E+ E LK LG+G +G V+ G G A+K +KK+ T + ER LE
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRL 1151
R++ L LH+ AF + L + +++ G L L +ER + ++
Sbjct: 114 HIRQSPFLVTLHY----AFQTETK------LHLILDYINGGELFTHLSQRERFTEHEVQI 163
Query: 1152 IIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IKRNTLVTG 1209
+ + +E+LH I++ D+K +N+L++ + + DFGLSK + T
Sbjct: 164 YVG-EIVLALEHLHKLGIIYRDIKLENILLDSNGHV----VLTDFGLSKEFVADETERAY 218
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYA 1254
GT+ +MAP+++ G S + VD +S G++++E+LTG P+
Sbjct: 219 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT 263
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 109/217 (50%), Gaps = 10/217 (4%)
Query: 1040 KNEDLEEL-KELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
K ED ++ +ELGSG F V + + G + A K IKK R+S + E RE
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKR--QSRASRRGVSREEIEREV 66
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
IL ++ H NV+ + V ++ L + E + G L L KE L +
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVL--ILELVSGGELFDFLAQKES-LSEEEATSFIKQ 123
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLP 1216
G+ YLH+K I HFDLK +N+++ K+ P K+ DFGL+ + + + GT
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
++APE++N + + D++S G++ + +L+G P+
Sbjct: 184 FVAPEIVN--YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 107/236 (45%), Gaps = 20/236 (8%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
+ E LK LG GTFG V K + T A+K +KK + LT E +L
Sbjct: 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT-----ENRVLQ 203
Query: 1101 KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFG 1160
HP + A Q L V E+ NG LS+ER + +
Sbjct: 204 NSRHPFLTALKYSFQ--THDRLCFVMEY-ANGGELFFHLSRERVFSEDRARFYGAEIVSA 260
Query: 1161 MEYLHS-KNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IKRNTLVTGGVRGTLPW 1217
++YLHS KN+V+ DLK +NL+++ I K+ DFGL K IK + GT +
Sbjct: 261 LDYLHSEKNVVYRDLKLENLMLDKDGHI----KITDFGLCKEGIKDGATMKTFC-GTPEY 315
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
+APE+L + VD + G+V++E++ G P+ N + + I+ +R P
Sbjct: 316 LAPEVLEDND--YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 369
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5-
Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)
Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor A-
443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of 4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 1043 DLEELKELGSGTFGTV--YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
D + LK LG GTFG V K G A+K ++K + +T E+ +L
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-----ESRVLQ 65
Query: 1101 KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFG 1160
HP + A Q L V E+ NG LS+ER + +
Sbjct: 66 NTRHPFLTALKYAFQ--THDRLCFVMEY-ANGGELFFHLSRERVFTEERARFYGAEIVSA 122
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT-GGVRGTLPWMA 1219
+EYLHS+++V+ D+K +NL+++ I K+ DFGL K + T GT ++A
Sbjct: 123 LEYLHSRDVVYRDIKLENLMLDKDGHI----KITDFGLCKEGISDGATMKXFCGTPEYLA 178
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE+L + VD + G+V++E++ G P+ N + + I+ +R P
Sbjct: 179 PEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 230
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 8/210 (3%)
Query: 1048 KELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K LGSG G V R T VAIK I K F S+ + L E EIL KL+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
++ V E M G L ++ +R + +L ++YLH
Sbjct: 76 CIIKIKNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLH 131
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPE-LLN 1224
I+H DLK +N+L++ ++ + K+ DFG SKI T + + GT ++APE L++
Sbjct: 132 ENGIIHRDLKPENVLLSSQEE-DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 190
Query: 1225 GSSSKVSEKVDVFSFGIVLWEILTGEEPYA 1254
++ + VD +S G++L+ L+G P++
Sbjct: 191 VGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 1043 DLEELKELGSGTFGTV--YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
D + LK LG GTFG V K G A+K ++K + +T E+ +L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-----ESRVLQ 60
Query: 1101 KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFG 1160
HP + A Q L V E+ NG LS+ER + +
Sbjct: 61 NTRHPFLTALKYAFQ--THDRLCFVMEY-ANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT-GGVRGTLPWMA 1219
+EYLHS+++V+ D+K +NL+++ I K+ DFGL K + T GT ++A
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHI----KITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE+L + VD + G+V++E++ G P+ N + + I+ +R P
Sbjct: 174 PEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 225
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 1043 DLEELKELGSGTFGTV--YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
D + LK LG GTFG V K G A+K ++K + +T E+ +L
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-----ESRVLQ 63
Query: 1101 KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFG 1160
HP + A Q L V E+ NG LS+ER + +
Sbjct: 64 NTRHPFLTALKYAFQ--THDRLCFVMEY-ANGGELFFHLSRERVFTEERARFYGAEIVSA 120
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT-GGVRGTLPWMA 1219
+EYLHS+++V+ D+K +NL+++ I K+ DFGL K + T GT ++A
Sbjct: 121 LEYLHSRDVVYRDIKLENLMLDKDGHI----KITDFGLCKEGISDGATMKTFCGTPEYLA 176
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE+L + VD + G+V++E++ G P+ N + + I+ +R P
Sbjct: 177 PEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 228
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With
Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 1043 DLEELKELGSGTFGTV--YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
D + LK LG GTFG V K G A+K ++K + +T E+ +L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-----ESRVLQ 60
Query: 1101 KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFG 1160
HP + A Q L V E+ NG LS+ER + +
Sbjct: 61 NTRHPFLTALKYAFQ--THDRLCFVMEY-ANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT-GGVRGTLPWMA 1219
+EYLHS+++V+ D+K +NL+++ I K+ DFGL K + T GT ++A
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHI----KITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE+L + VD + G+V++E++ G P+ N + + I+ +R P
Sbjct: 174 PEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 225
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 1048 KELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
+ELGSG F V + + T + A K IKK R +E RE IL ++ HP
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKEIQHP 74
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
NV+ + V ++ L + E + G L L KE L + G+ YLH
Sbjct: 75 NVITLHEVYENKTDVIL--ILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
S I HFDLK +N+++ ++ +P K+ DFGL+ + GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + D++S G++ + +L+G P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 1048 KELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
+ELGSG F V + + T + A K IKK R +E RE IL ++ HP
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKEIQHP 74
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
NV+ + V ++ L + E + G L L KE L + G+ YLH
Sbjct: 75 NVITLHEVYENKTDVIL--ILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
S I HFDLK +N+++ ++ +P K+ DFGL+ + GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + D++S G++ + +L+G P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 109/217 (50%), Gaps = 10/217 (4%)
Query: 1040 KNEDLEEL-KELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
K ED ++ +ELGSG F V + + G + A K IKK R+S + E RE
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKR--QSRASRRGVSREEIEREV 66
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
IL ++ H NV+ + V ++ L + E + G L L KE L +
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVL--ILELVSGGELFDFLAQKE-SLSEEEATSFIKQ 123
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLP 1216
G+ YLH+K I HFDLK +N+++ K+ P K+ DFGL+ + + + GT
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
++APE++N + + D++S G++ + +L+G P+
Sbjct: 184 FVAPEIVN--YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 1043 DLEELKELGSGTFGTV--YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
D + LK LG GTFG V K G A+K ++K + +T E+ +L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-----ESRVLQ 60
Query: 1101 KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFG 1160
HP + A Q L V E+ NG LS+ER + +
Sbjct: 61 NTRHPFLTALKYAFQ--THDRLCFVMEY-ANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT-GGVRGTLPWMA 1219
+EYLHS+++V+ D+K +NL+++ I K+ DFGL K + T GT ++A
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHI----KITDFGLCKEGISDGATMKTFCGTPEYLA 173
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE+L + VD + G+V++E++ G P+ N + + I+ +R P
Sbjct: 174 PEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 225
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound
Inhibitor Fragment
Length = 293
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 1048 KELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
+ELGSG F V + + T + A K IKK R +E RE IL ++ HP
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKEIQHP 73
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
NV+ + V ++ L + E + G L L KE L + G+ YLH
Sbjct: 74 NVITLHEVYENKTDVIL--ILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 130
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
S I HFDLK +N+++ ++ +P K+ DFGL+ + GT ++APE++N
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 189
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + D++S G++ + +L+G P+
Sbjct: 190 -YEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In
Complex With Amppnp And Mg2+
Length = 295
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 1048 KELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
+ELGSG F V + + T + A K IKK R +E RE IL ++ HP
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKEIQHP 74
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
NV+ + V ++ L + E + G L L KE L + G+ YLH
Sbjct: 75 NVITLHEVYENKTDVIL--ILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
S I HFDLK +N+++ ++ +P K+ DFGL+ + GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + D++S G++ + +L+G P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 1043 DLEELKELGSGTFGTV--YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
D + LK LG GTFG V K G A+K ++K + +T E+ +L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-----ESRVLQ 60
Query: 1101 KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFG 1160
HP + A Q L V E+ NG LS+ER + +
Sbjct: 61 NTRHPFLTALKYAFQ--THDRLCFVMEY-ANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT-GGVRGTLPWMA 1219
+EYLHS+++V+ D+K +NL+++ I K+ DFGL K + T GT ++A
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHI----KITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE+L + VD + G+V++E++ G P+ N + + I+ +R P
Sbjct: 174 PEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 225
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic Domain
Of Death-Associated Protein Kinase With Atp Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 1048 KELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
+ELGSG F V + + T + A K IKK R +E RE IL ++ HP
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKEIQHP 73
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
NV+ + V ++ L + E + G L L KE L + G+ YLH
Sbjct: 74 NVITLHEVYENKTDVIL--ILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 130
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
S I HFDLK +N+++ ++ +P K+ DFGL+ + GT ++APE++N
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 189
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + D++S G++ + +L+G P+
Sbjct: 190 -YEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death
Associated Protein Kinase Catalytic Domain With Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death
Associated Protein Kinase Catalytic Domain
Length = 295
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 1048 KELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
+ELGSG F V + + T + A K IKK R +E RE IL ++ HP
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKEIQHP 74
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
NV+ + V ++ L + E + G L L KE L + G+ YLH
Sbjct: 75 NVITLHEVYENKTDVIL--ILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
S I HFDLK +N+++ ++ +P K+ DFGL+ + GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + D++S G++ + +L+G P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 109/217 (50%), Gaps = 10/217 (4%)
Query: 1040 KNEDLEEL-KELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
K ED ++ +ELGSG F V + + G + A K IKK R+S + E RE
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKR--QSRASRRGVSREEIEREV 66
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
IL ++ H NV+ + V ++ L + E + G L L KE L +
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVL--ILELVSGGELFDFLAQKES-LSEEEATSFIKQ 123
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLP 1216
G+ YLH+K I HFDLK +N+++ K+ P K+ DFGL+ + + + GT
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
++APE++N + + D++S G++ + +L+G P+
Sbjct: 184 FVAPEIVN--YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 1048 KELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
+ELGSG F V + + T + A K IKK R +E RE IL ++ HP
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKEIQHP 74
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
NV+ + V ++ L + E + G L L KE L + G+ YLH
Sbjct: 75 NVITLHEVYENKTDVIL--ILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH 131
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
S I HFDLK +N+++ ++ +P K+ DFGL+ + GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + D++S G++ + +L+G P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
Length = 285
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 1048 KELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
+ELGSG F V + + T + A K IKK R +E RE IL ++ HP
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKEIQHP 74
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
NV+ + V ++ L + E + G L L KE L + G+ YLH
Sbjct: 75 NVITLHEVYENKTDVIL--ILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
S I HFDLK +N+++ ++ +P K+ DFGL+ + GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + D++S G++ + +L+G P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 1048 KELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
+ELGSG F V + + T + A K IKK R +E RE IL ++ HP
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKEIQHP 74
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
NV+ + V ++ L + E + G L L KE L + G+ YLH
Sbjct: 75 NVITLHEVYENKTDVIL--ILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH 131
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
S I HFDLK +N+++ ++ +P K+ DFGL+ + GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVN- 190
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + D++S G++ + +L+G P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 1043 DLEELKELGSGTFGTV--YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
D + LK LG GTFG V K G A+K ++K + +T E+ +L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-----ESRVLQ 60
Query: 1101 KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFG 1160
HP + A Q L V E+ NG LS+ER + +
Sbjct: 61 NTRHPFLTALKYAFQ--THDRLCFVMEY-ANGGELFFHLSRERVFTEERARFYGAEIVSA 117
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT-GGVRGTLPWMA 1219
+EYLHS+++V+ D+K +NL+++ I K+ DFGL K + T GT ++A
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHI----KITDFGLCKEGISDGATMKTFCGTPEYLA 173
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE+L + VD + G+V++E++ G P+ N + + I+ +R P
Sbjct: 174 PEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 225
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 1048 KELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
+ELGSG F V + + T + A K IKK R +E RE IL ++ HP
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKEIQHP 74
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
NV+ + V ++ L + E + G L L KE L + G+ YLH
Sbjct: 75 NVITLHEVYENKTDVIL--ILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH 131
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
S I HFDLK +N+++ ++ +P K+ DFGL+ + GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + D++S G++ + +L+G P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 1151 LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKR--NTLV 1207
+ + A GME+L S+ +H DL N+L++ K+ + K+ DFGL++ I + + +
Sbjct: 203 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN----VVKICDFGLARDIYKDPDYVR 258
Query: 1208 TGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIV 1266
G R L WMAPE + + DV+SFG++LWEI + G PY + +
Sbjct: 259 KGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 316
Query: 1267 NNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P + E M CW +P RP+F+E+ L
Sbjct: 317 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG V G D VA+K +K+ G + + R + E +IL
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMS---ELKILI 87
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK 1141
+ HH NVV G PGG L + EF G+L L SK
Sbjct: 88 HIGHHLNVVNLLGACTK-PGGPLMVIVEFCKFGNLSTYLRSK 128
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 1151 LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKR--NTLV 1207
+ + A GME+L S+ +H DL N+L++ K+ + K+ DFGL++ I + + +
Sbjct: 201 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN----VVKICDFGLARDIYKDPDYVR 256
Query: 1208 TGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIV 1266
G R L WMAPE + + DV+SFG++LWEI + G PY + +
Sbjct: 257 KGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 314
Query: 1267 NNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P + E M CW +P RP+F+E+ L
Sbjct: 315 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG V G D VA+K +K+ G + + R + E +IL
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMS---ELKILI 85
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK 1141
+ HH NVV G PGG L + EF G+L L SK
Sbjct: 86 HIGHHLNVVNLLGACTK-PGGPLMVIVEFCKFGNLSTYLRSK 126
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 1048 KELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
+ELGSG F V + + T + A K IKK R +E RE IL ++ HP
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKEIQHP 74
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
NV+ + V ++ L + E + G L L KE L + G+ YLH
Sbjct: 75 NVITLHEVYENKTDVIL--IGELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
S I HFDLK +N+++ ++ +P K+ DFGL+ + GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + D++S G++ + +L+G P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 133/304 (43%), Gaps = 60/304 (19%)
Query: 1050 LGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK--LHHPNV 1107
+G G FG V+ GKWRG +VA+K SS +ER ++REAEI L H N+
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIF--------SSREER---SWFREAEIYQTVMLRHENI 98
Query: 1108 VAFYGV--VQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEYL 1164
+ F +G L V+++ +GSL L R+ + +I +A+ A G+ +L
Sbjct: 99 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHL 155
Query: 1165 HSK--------NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR---- 1212
H + I H DLK N+LV C + D GL+ + T +
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGT----CCIADLGLAVRHDSATDTIDIAPNHR 211
Query: 1213 -GTLPWMAPELLNGSSS----KVSEKVDVFSFGIVLWEI-----LTG-EEPYANMHYGAI 1261
GT +MAPE+L+ S + + ++ D+++ G+V WEI + G E Y +Y +
Sbjct: 212 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 271
Query: 1262 IGG---------IVNNTLRPPVPGFCDSEWRL-----LMEQCWAPDPVVRPSFTEIARRL 1307
+ LRP +P S L +M +CW + R + I + L
Sbjct: 272 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 331
Query: 1308 RVMS 1311
+S
Sbjct: 332 SQLS 335
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 1048 KELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
+ELGSG F V + + T + A K IKK R +E RE IL ++ HP
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKEIQHP 74
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
NV+ + V ++ L + E + G L L KE L + G+ YLH
Sbjct: 75 NVITLHEVYENKTDVIL--ILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH 131
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
S I HFDLK +N+++ ++ +P K+ DFGL+ + GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + D++S G++ + +L+G P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 1046 ELKE-LGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
E KE LG+G F V + + T A+K I K G+ S E E +L K+
Sbjct: 25 EFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIEN-------EIAVLRKI 77
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII--AMDAAFG 1160
H N+VA + + L V + + G L ++ K + ++ +I +DA +
Sbjct: 78 KHENIVALEDIYESP--NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVY- 134
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAP 1220
YLH IVH DLK +NLL +D I + DFGLSK++ V GT ++AP
Sbjct: 135 --YLHRMGIVHRDLKPENLLYYSQDEESKIM-ISDFGLSKMEGKGDVMSTACGTPGYVAP 191
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
E+L + S+ VD +S G++ + +L G P+
Sbjct: 192 EVL--AQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel
Pyrrolopyrimidine Inhibitor
Length = 359
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 1151 LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKR--NTLV 1207
+ + A GME+L S+ +H DL N+L++ K+ + K+ DFGL++ I + + +
Sbjct: 196 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN----VVKICDFGLARDIYKDPDYVR 251
Query: 1208 TGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIV 1266
G R L WMAPE + + DV+SFG++LWEI + G PY + +
Sbjct: 252 KGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 309
Query: 1267 NNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P + E M CW +P RP+F+E+ L
Sbjct: 310 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG V G D VA+K +K+ G + + R + E +IL
Sbjct: 28 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMS---ELKILI 80
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK 1141
+ HH NVV G PGG L + EF G+L L SK
Sbjct: 81 HIGHHLNVVNLLGACTK-PGGPLMVIVEFCKFGNLSTYLRSK 121
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 133/304 (43%), Gaps = 60/304 (19%)
Query: 1050 LGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK--LHHPNV 1107
+G G FG V+ GKWRG +VA+K SS +ER ++REAEI L H N+
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIF--------SSREER---SWFREAEIYQTVMLRHENI 85
Query: 1108 VAFYGV--VQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEYL 1164
+ F +G L V+++ +GSL L R+ + +I +A+ A G+ +L
Sbjct: 86 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHL 142
Query: 1165 HSK--------NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR---- 1212
H + I H DLK N+LV C + D GL+ + T +
Sbjct: 143 HMEIVGTQGKPAIAHRDLKSKNILVKKNGT----CCIADLGLAVRHDSATDTIDIAPNHR 198
Query: 1213 -GTLPWMAPELLNGSSS----KVSEKVDVFSFGIVLWEI-----LTG-EEPYANMHYGAI 1261
GT +MAPE+L+ S + + ++ D+++ G+V WEI + G E Y +Y +
Sbjct: 199 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 258
Query: 1262 IGG---------IVNNTLRPPVPGFCDSEWRL-----LMEQCWAPDPVVRPSFTEIARRL 1307
+ LRP +P S L +M +CW + R + I + L
Sbjct: 259 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 318
Query: 1308 RVMS 1311
+S
Sbjct: 319 SQLS 322
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 37/220 (16%)
Query: 1047 LKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+++G G GTVY G +VAI+++ + ++ L + E ++ + +
Sbjct: 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNL-----QQQPKKELII---NEILVMRENKN 76
Query: 1105 PNVVAF---YGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
PN+V + Y V G L V E++ GSL V+ E +D + + + +
Sbjct: 77 PNIVNYLDSYLV-----GDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQAL 129
Query: 1162 EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS------KIKRNTLVTGGVRGTL 1215
E+LHS ++H D+K DN+L+ + + K+ DFG + KR+ +V GT
Sbjct: 130 EFLHSNQVIHRDIKSDNILLGMDGSV----KLTDFGFCAQITPEQSKRSXMV-----GTP 180
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
WMAPE++ + KVD++S GI+ E++ GE PY N
Sbjct: 181 YWMAPEVV--TRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 1048 KELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
+ELGSG F V + + T + A K IKK R +E RE IL ++ HP
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKEIQHP 74
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
NV+ + V ++ L + E + G L L KE L + G+ YLH
Sbjct: 75 NVITLHEVYENKTDVIL--ILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
S I HFDLK +N+++ ++ +P K+ DFGL+ + GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + D++S G++ + +L+G P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 37/220 (16%)
Query: 1047 LKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+++G G GTVY G +VAI+++ + ++ L + E ++ + +
Sbjct: 26 FEKIGQGASGTVYTAMDVATGQEVAIRQMNL-----QQQPKKELII---NEILVMRENKN 77
Query: 1105 PNVVAF---YGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
PN+V + Y V G L V E++ GSL V+ E +D + + + +
Sbjct: 78 PNIVNYLDSYLV-----GDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQAL 130
Query: 1162 EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS------KIKRNTLVTGGVRGTL 1215
E+LHS ++H D+K DN+L+ + + K+ DFG + KR+ +V GT
Sbjct: 131 EFLHSNQVIHRDIKSDNILLGMDGSV----KLTDFGFCAQITPEQSKRSXMV-----GTP 181
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
WMAPE++ + KVD++S GI+ E++ GE PY N
Sbjct: 182 YWMAPEVV--TRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 219
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 133/304 (43%), Gaps = 60/304 (19%)
Query: 1050 LGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK--LHHPNV 1107
+G G FG V+ GKWRG +VA+K SS +ER ++REAEI L H N+
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIF--------SSREER---SWFREAEIYQTVMLRHENI 65
Query: 1108 VAFYGV--VQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEYL 1164
+ F +G L V+++ +GSL L R+ + +I +A+ A G+ +L
Sbjct: 66 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHL 122
Query: 1165 HSK--------NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR---- 1212
H + I H DLK N+LV C + D GL+ + T +
Sbjct: 123 HMEIVGTQGKPAIAHRDLKSKNILVKKNGT----CCIADLGLAVRHDSATDTIDIAPNHR 178
Query: 1213 -GTLPWMAPELLNGSSS----KVSEKVDVFSFGIVLWEI-----LTG-EEPYANMHYGAI 1261
GT +MAPE+L+ S + + ++ D+++ G+V WEI + G E Y +Y +
Sbjct: 179 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 238
Query: 1262 IGG---------IVNNTLRPPVPGFCDSEWRL-----LMEQCWAPDPVVRPSFTEIARRL 1307
+ LRP +P S L +M +CW + R + I + L
Sbjct: 239 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 298
Query: 1308 RVMS 1311
+S
Sbjct: 299 SQLS 302
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 1151 LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKR--NTLV 1207
+ + A GME+L S+ +H DL N+L++ K+ + K+ DFGL++ I + + +
Sbjct: 194 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN----VVKICDFGLARDIYKDPDYVR 249
Query: 1208 TGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIGGIV 1266
G R L WMAPE + + DV+SFG++LWEI + G PY + +
Sbjct: 250 KGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 307
Query: 1267 NNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
R P + E M CW +P RP+F+E+ L
Sbjct: 308 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-------VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
K LG G FG V G D VA+K +K+ G + + R + E +IL
Sbjct: 26 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMS---ELKILI 78
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK 1141
+ HH NVV G PGG L + EF G+L L SK
Sbjct: 79 HIGHHLNVVNLLGACTK-PGGPLMVIVEFCKFGNLSTYLRSK 119
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 37/220 (16%)
Query: 1047 LKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+++G G GTVY G +VAI+++ + ++ L + E ++ + +
Sbjct: 26 FEKIGQGASGTVYTAMDVATGQEVAIRQMNL-----QQQPKKELII---NEILVMRENKN 77
Query: 1105 PNVVAF---YGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
PN+V + Y V G L V E++ GSL V+ E +D + + + +
Sbjct: 78 PNIVNYLDSYLV-----GDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQAL 130
Query: 1162 EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS------KIKRNTLVTGGVRGTL 1215
E+LHS ++H ++K DN+L+ + + K+ DFG + KR+T+V GT
Sbjct: 131 EFLHSNQVIHRNIKSDNILLGMDGSV----KLTDFGFCAQITPEQSKRSTMV-----GTP 181
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
WMAPE++ + KVD++S GI+ E++ GE PY N
Sbjct: 182 YWMAPEVV--TRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 219
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 133/304 (43%), Gaps = 60/304 (19%)
Query: 1050 LGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK--LHHPNV 1107
+G G FG V+ GKWRG +VA+K SS +ER ++REAEI L H N+
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIF--------SSREER---SWFREAEIYQTVMLRHENI 60
Query: 1108 VAFYGV--VQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEYL 1164
+ F +G L V+++ +GSL L R+ + +I +A+ A G+ +L
Sbjct: 61 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHL 117
Query: 1165 HSK--------NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR---- 1212
H + I H DLK N+LV C + D GL+ + T +
Sbjct: 118 HMEIVGTQGKPAIAHRDLKSKNILVKKNGT----CCIADLGLAVRHDSATDTIDIAPNHR 173
Query: 1213 -GTLPWMAPELLNGSSS----KVSEKVDVFSFGIVLWEI-----LTG-EEPYANMHYGAI 1261
GT +MAPE+L+ S + + ++ D+++ G+V WEI + G E Y +Y +
Sbjct: 174 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 233
Query: 1262 IGG---------IVNNTLRPPVPGFCDSEWRL-----LMEQCWAPDPVVRPSFTEIARRL 1307
+ LRP +P S L +M +CW + R + I + L
Sbjct: 234 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 293
Query: 1308 RVMS 1311
+S
Sbjct: 294 SQLS 297
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
Length = 278
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 1048 KELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
+ELGSG F V + + T + A K IKK R +E RE IL ++ HP
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKEIQHP 74
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
NV+ + V ++ L + E + G L L KE L + G+ YLH
Sbjct: 75 NVITLHEVYENKTDVIL--ILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
S I HFDLK +N+++ ++ +P K+ DFGL+ + GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + D++S G++ + +L+G P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 37/220 (16%)
Query: 1047 LKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+++G G GTVY G +VAI+++ + ++ L + E ++ + +
Sbjct: 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNL-----QQQPKKELII---NEILVMRENKN 76
Query: 1105 PNVVAF---YGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
PN+V + Y V G L V E++ GSL V+ E +D + + + +
Sbjct: 77 PNIVNYLDSYLV-----GDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQAL 129
Query: 1162 EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS------KIKRNTLVTGGVRGTL 1215
E+LHS ++H D+K DN+L+ + + K+ DFG + KR+ +V GT
Sbjct: 130 EFLHSNQVIHRDIKSDNILLGMDGSV----KLTDFGFCAQITPEQSKRSEMV-----GTP 180
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
WMAPE++ + KVD++S GI+ E++ GE PY N
Sbjct: 181 YWMAPEVV--TRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With 4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 133/304 (43%), Gaps = 60/304 (19%)
Query: 1050 LGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK--LHHPNV 1107
+G G FG V+ GKWRG +VA+K SS +ER ++REAEI L H N+
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIF--------SSREER---SWFREAEIYQTVMLRHENI 62
Query: 1108 VAFYGV--VQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEYL 1164
+ F +G L V+++ +GSL L R+ + +I +A+ A G+ +L
Sbjct: 63 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHL 119
Query: 1165 HSK--------NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR---- 1212
H + I H DLK N+LV C + D GL+ + T +
Sbjct: 120 HMEIVGTQGKPAIAHRDLKSKNILVKKNGT----CCIADLGLAVRHDSATDTIDIAPNHR 175
Query: 1213 -GTLPWMAPELLNGSSS----KVSEKVDVFSFGIVLWEI-----LTG-EEPYANMHYGAI 1261
GT +MAPE+L+ S + + ++ D+++ G+V WEI + G E Y +Y +
Sbjct: 176 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 235
Query: 1262 IGG---------IVNNTLRPPVPGFCDSEWRL-----LMEQCWAPDPVVRPSFTEIARRL 1307
+ LRP +P S L +M +CW + R + I + L
Sbjct: 236 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 295
Query: 1308 RVMS 1311
+S
Sbjct: 296 SQLS 299
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf-
Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 133/304 (43%), Gaps = 60/304 (19%)
Query: 1050 LGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK--LHHPNV 1107
+G G FG V+ GKWRG +VA+K SS +ER ++REAEI L H N+
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIF--------SSREER---SWFREAEIYQTVMLRHENI 59
Query: 1108 VAFYGV--VQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI-IAMDAAFGMEYL 1164
+ F +G L V+++ +GSL L R+ + +I +A+ A G+ +L
Sbjct: 60 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHL 116
Query: 1165 HSK--------NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR---- 1212
H + I H DLK N+LV C + D GL+ + T +
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGT----CCIADLGLAVRHDSATDTIDIAPNHR 172
Query: 1213 -GTLPWMAPELLNGSSS----KVSEKVDVFSFGIVLWEI-----LTG-EEPYANMHYGAI 1261
GT +MAPE+L+ S + + ++ D+++ G+V WEI + G E Y +Y +
Sbjct: 173 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232
Query: 1262 IGG---------IVNNTLRPPVPGFCDSEWRL-----LMEQCWAPDPVVRPSFTEIARRL 1307
+ LRP +P S L +M +CW + R + I + L
Sbjct: 233 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 292
Query: 1308 RVMS 1311
+S
Sbjct: 293 SQLS 296
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 131/284 (46%), Gaps = 33/284 (11%)
Query: 1039 IKNEDLEELKELGSGTFGTVY---------HGKWRGTDVAIKRIKKSCFTGRSSEQERLT 1089
I+NEDL + LG GTF ++ +G+ T+V +K + K+ +
Sbjct: 5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--------HRNYS 56
Query: 1090 LEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRK 1149
F+ A ++SKL H ++V YGV G L V EF+ GSL L + ++
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCFCGDENIL--VQEFVKFGSLDTYLKKNKNCINILW 114
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIR-----PICKVGDFGLSKIKRN 1204
+L +A A+ M +L ++H ++ N+L+ +++ R P K+ D G+S
Sbjct: 115 KLEVAKQLAWAMHFLEENTLIHGNVCAKNILL-IREEDRKTGNPPFIKLSDPGISI---T 170
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIG 1263
L ++ +PW+ PE + + ++ D +SFG LWEI + G++P + + +
Sbjct: 171 VLPKDILQERIPWVPPECIENPKN-LNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ 229
Query: 1264 GIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ R +P +E L+ C +P RPSF I R L
Sbjct: 230 FYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 8/210 (3%)
Query: 1048 KELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K LGSG G V R T VAI+ I K F S+ + L E EIL KL+HP
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 200
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
++ V E M G L ++ +R + +L ++YLH
Sbjct: 201 CIIKIKNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLH 256
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPE-LLN 1224
I+H DLK +N+L++ ++ + K+ DFG SKI T + + GT ++APE L++
Sbjct: 257 ENGIIHRDLKPENVLLSSQEE-DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 315
Query: 1225 GSSSKVSEKVDVFSFGIVLWEILTGEEPYA 1254
++ + VD +S G++L+ L+G P++
Sbjct: 316 VGTAGYNRAVDCWSLGVILFICLSGYPPFS 345
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 8/210 (3%)
Query: 1048 KELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K LGSG G V R T VAI+ I K F S+ + L E EIL KL+HP
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 214
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
++ V E M G L ++ +R + +L ++YLH
Sbjct: 215 CIIKIKNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLH 270
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPE-LLN 1224
I+H DLK +N+L++ ++ + K+ DFG SKI T + + GT ++APE L++
Sbjct: 271 ENGIIHRDLKPENVLLSSQEE-DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 329
Query: 1225 GSSSKVSEKVDVFSFGIVLWEILTGEEPYA 1254
++ + VD +S G++L+ L+G P++
Sbjct: 330 VGTAGYNRAVDCWSLGVILFICLSGYPPFS 359
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 130/299 (43%), Gaps = 42/299 (14%)
Query: 1027 ALGNFDISTLQIIKNEDLEELKEL-GSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQ 1085
+L D+S L+ + EL EL G+GT+G VY G+ T + IK TG E
Sbjct: 10 SLDEIDLSALR--DPAGIFELVELVGNGTYGQVYKGRHVKTG-QLAAIKVMDVTGDEEE- 65
Query: 1086 ERLTLEFWREAEILSKL-HHPNVVAFYGV-VQDGPGGT---LATVTEFMVNGSLRHVLL- 1139
E +E +L K HH N+ +YG ++ P G L V EF GS+ ++
Sbjct: 66 -----EIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN 120
Query: 1140 SKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS 1199
+K L I + G+ +LH ++H D+K N+L+ + K+ DFG+S
Sbjct: 121 TKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEV----KLVDFGVS 176
Query: 1200 KI------KRNTLVTGGVRGTLPWMAPELL---NGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+RNT + GT WMAPE++ + K D++S GI E+ G
Sbjct: 177 AQLDRTVGRRNTFI-----GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 231
Query: 1251 EPYANMHYGAIIGGIVNNTLRPPVPGFCDSEW----RLLMEQCWAPDPVVRPSFTEIAR 1305
P +MH + I N P P +W + +E C + RP+ ++ +
Sbjct: 232 PPLCDMHPMRALFLIPRN----PAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 125/273 (45%), Gaps = 20/273 (7%)
Query: 1040 KNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ ED E L +G+G++G + R +D I + K G +E E+ L E +L
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIR-RKSDGKI-LVWKELDYGSMTEAEKQMLV--SEVNLL 59
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLL--SKER-HLDRRKRLIIAMD 1156
+L HPN+V +Y + D TL V E+ G L V+ +KER +LD L +
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 1157 AAFGMEYLHSKN-----IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI-KRNTLVTGG 1210
++ H ++ ++H DLK N+ ++ K + K+GDFGL++I +
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNV----KLGDFGLARILNHDEDFAKE 175
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
GT +M+PE +N S +EK D++S G +L+E+ P+ + G I
Sbjct: 176 FVGTPYYMSPEQMNRMS--YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF 233
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R +P E ++ + RPS EI
Sbjct: 234 R-RIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 33/284 (11%)
Query: 1039 IKNEDLEELKELGSGTFGTVY---------HGKWRGTDVAIKRIKKSCFTGRSSEQERLT 1089
I+NEDL + LG GTF ++ +G+ T+V +K + K+ +
Sbjct: 5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--------HRNYS 56
Query: 1090 LEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRK 1149
F+ A ++SKL H ++V YGV G L V EF+ GSL L + ++
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCVCGDENIL--VQEFVKFGSLDTYLKKNKNCINILW 114
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIR-----PICKVGDFGLSKIKRN 1204
+L +A A M +L ++H ++ N+L+ +++ R P K+ D G+S
Sbjct: 115 KLEVAKQLAAAMHFLEENTLIHGNVCAKNILL-IREEDRKTGNPPFIKLSDPGISI---T 170
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT-GEEPYANMHYGAIIG 1263
L ++ +PW+ PE + + ++ D +SFG LWEI + G++P + + +
Sbjct: 171 VLPKDILQERIPWVPPECIENPKN-LNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ 229
Query: 1264 GIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRL 1307
+ R +P +E L+ C +P RPSF I R L
Sbjct: 230 FYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 109/236 (46%), Gaps = 18/236 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
++ E ++ LG G+FG V + + G A+K +KK + +T E IL
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMT-----EKRIL 77
Query: 1100 S-KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
S +HP + + Q L V EF VNG + K R D + A +
Sbjct: 78 SLARNHPFLTQLFCCFQTP--DRLFFVMEF-VNGGDLMFHIQKSRRFDEARARFYAAEII 134
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-RNTLVTGGVRGTLPW 1217
+ +LH K I++ DLK DN+L++ + CK+ DFG+ K N + T GT +
Sbjct: 135 SALMFLHDKGIIYRDLKLDNVLLDHEGH----CKLADFGMCKEGICNGVTTATFCGTPDY 190
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
+APE+L VD ++ G++L+E+L G P+ + + I+N+ + P
Sbjct: 191 IAPEILQ--EMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP 244
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 1041 NEDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E L ++G G+ G V K G VA+K++ +Q+R L F E I
Sbjct: 44 REYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMD-------LRKQQRRELLF-NEVVI 95
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
+ HH NVV Y G L V EF+ G+L ++ ++ + + +
Sbjct: 96 MRDYHHDNVVDMYSSYL--VGDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLSVL 151
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPW 1217
+ YLH++ ++H D+K D++L+ I K+ DFG +++ + + GT W
Sbjct: 152 RALSYLHNQGVIHRDIKSDSILLTSDGRI----KLSDFGFCAQVSKEVPKRKXLVGTPYW 207
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
MAPE++ S +VD++S GI++ E++ GE PY N
Sbjct: 208 MAPEVI--SRLPYGTEVDIWSLGIMVIEMIDGEPPYFN 243
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 120/262 (45%), Gaps = 20/262 (7%)
Query: 1047 LKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLH 1103
+K LG G+FG V YH G VA+K I K +S Q R+ RE L L
Sbjct: 18 VKTLGEGSFGKVKLAYHTT-TGQKVALKIINKKVL-AKSDMQGRIE----REISYLRLLR 71
Query: 1104 HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEY 1163
HP+++ Y V++ + V E+ N +++ + +R + +A +EY
Sbjct: 72 HPHIIKLYDVIKSK--DEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA--VEY 127
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELL 1223
H IVH DLK +NLL++ + K+ DFGLS I + G+ + APE++
Sbjct: 128 CHRHKIVHRDLKPENLLLDEHLNV----KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 183
Query: 1224 NGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWR 1283
+G E VDV+S G++L+ +L P+ + + I N +P F
Sbjct: 184 SGKLYAGPE-VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY--TLPKFLSPGAA 240
Query: 1284 LLMEQCWAPDPVVRPSFTEIAR 1305
L+++ +P+ R S EI +
Sbjct: 241 GLIKRMLIVNPLNRISIHEIMQ 262
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs
Length = 301
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 18/267 (6%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
+K++D E++ ELG+G G V+ + + + + R K + + + ++ RE ++
Sbjct: 6 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMAR-KLIHLEIKPAIRNQII----RELQV 60
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L + + P +V FYG G ++ E M GSL V L K + + +++
Sbjct: 61 LHECNSPYIVGFYGAFYS--DGEISICMEHMDGGSLDQV-LKKAGRIPEQILGKVSIAVI 117
Query: 1159 FGMEYLHSKN-IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPW 1217
G+ YL K+ I+H D+K N+LVN + I K+ DFG+S + + V GT +
Sbjct: 118 KGLTYLREKHKIMHRDVKPSNILVNSRGEI----KLCDFGVSGQLIDEMANEFV-GTRSY 172
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
M+PE L G+ V D++S G+ L E+ G P M ++ IVN P +P
Sbjct: 173 MSPERLQGTHYSVQS--DIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEP-PPKLPSA 229
Query: 1278 CDS-EWRLLMEQCWAPDPVVRPSFTEI 1303
S E++ + +C +P R ++
Sbjct: 230 VFSLEFQDFVNKCLIKNPAERADLKQL 256
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 120/262 (45%), Gaps = 20/262 (7%)
Query: 1047 LKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLH 1103
+K LG G+FG V YH G VA+K I K +S Q R+ RE L L
Sbjct: 19 VKTLGEGSFGKVKLAYHTT-TGQKVALKIINKKVL-AKSDMQGRIE----REISYLRLLR 72
Query: 1104 HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEY 1163
HP+++ Y V++ + V E+ N +++ + +R + +A +EY
Sbjct: 73 HPHIIKLYDVIKSK--DEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA--VEY 128
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELL 1223
H IVH DLK +NLL++ + K+ DFGLS I + G+ + APE++
Sbjct: 129 CHRHKIVHRDLKPENLLLDEHLNV----KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 184
Query: 1224 NGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWR 1283
+G E VDV+S G++L+ +L P+ + + I N +P F
Sbjct: 185 SGKLYAGPE-VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY--TLPKFLSPGAA 241
Query: 1284 LLMEQCWAPDPVVRPSFTEIAR 1305
L+++ +P+ R S EI +
Sbjct: 242 GLIKRMLIVNPLNRISIHEIMQ 263
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 120/262 (45%), Gaps = 20/262 (7%)
Query: 1047 LKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLH 1103
+K LG G+FG V YH G VA+K I K +S Q R+ RE L L
Sbjct: 13 VKTLGEGSFGKVKLAYHTT-TGQKVALKIINKKVL-AKSDMQGRIE----REISYLRLLR 66
Query: 1104 HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEY 1163
HP+++ Y V++ + V E+ N +++ + +R + +A +EY
Sbjct: 67 HPHIIKLYDVIKSK--DEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA--VEY 122
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELL 1223
H IVH DLK +NLL++ + K+ DFGLS I + G+ + APE++
Sbjct: 123 CHRHKIVHRDLKPENLLLDEHLNV----KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 178
Query: 1224 NGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWR 1283
+G E VDV+S G++L+ +L P+ + + I N +P F
Sbjct: 179 SGKLYAGPE-VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT--LPKFLSPGAA 235
Query: 1284 LLMEQCWAPDPVVRPSFTEIAR 1305
L+++ +P+ R S EI +
Sbjct: 236 GLIKRMLIVNPLNRISIHEIMQ 257
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 120/262 (45%), Gaps = 20/262 (7%)
Query: 1047 LKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLH 1103
+K LG G+FG V YH G VA+K I K +S Q R+ RE L L
Sbjct: 9 VKTLGEGSFGKVKLAYHTT-TGQKVALKIINKKVL-AKSDMQGRIE----REISYLRLLR 62
Query: 1104 HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEY 1163
HP+++ Y V++ + V E+ N +++ + +R + +A +EY
Sbjct: 63 HPHIIKLYDVIKSK--DEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA--VEY 118
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELL 1223
H IVH DLK +NLL++ + K+ DFGLS I + G+ + APE++
Sbjct: 119 CHRHKIVHRDLKPENLLLDEHLNV----KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 174
Query: 1224 NGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWR 1283
+G E VDV+S G++L+ +L P+ + + I N +P F
Sbjct: 175 SGKLYAGPE-VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT--LPKFLSPGAA 231
Query: 1284 LLMEQCWAPDPVVRPSFTEIAR 1305
L+++ +P+ R S EI +
Sbjct: 232 GLIKRMLIVNPLNRISIHEIMQ 253
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 20/270 (7%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
+K++D E++ ELG+G G V+ + + + + R K + + + ++ RE ++
Sbjct: 22 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMAR-KLIHLEIKPAIRNQII----RELQV 76
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L + + P +V FYG G ++ E M GSL V L K + + +++
Sbjct: 77 LHECNSPYIVGFYGAFYS--DGEISICMEHMDGGSLDQV-LKKAGRIPEQILGKVSIAVI 133
Query: 1159 FGMEYLHSKN-IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPW 1217
G+ YL K+ I+H D+K N+LVN + I K+ DFG+S +++ V GT +
Sbjct: 134 KGLTYLREKHKIMHRDVKPSNILVNSRGEI----KLCDFGVSGQLIDSMANSFV-GTRSY 188
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVP-- 1275
M+PE L G+ V D++S G+ L E+ G P + I +++ + P P
Sbjct: 189 MSPERLQGTHYSVQS--DIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKL 246
Query: 1276 --GFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
G E++ + +C +P R ++
Sbjct: 247 PSGVFSLEFQDFVNKCLIKNPAERADLKQL 276
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 17/256 (6%)
Query: 1050 LGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG GTFG V GK G VA+K + + RS + + + RE + L HP++
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQ--KIRSLD---VVGKIRREIQNLKLFRHPHI 78
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ Y V+ + V E++ G L + R LD ++ + G++Y H
Sbjct: 79 IKLYQVI--STPSDIFMVMEYVSGGELFDYICKNGR-LDEKESRRLFQQILSGVDYCHRH 135
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSS 1227
+VH DLK +N+L++ K+ DFGLS + + G+ + APE+++G
Sbjct: 136 MVVHRDLKPENVLLDAHMN----AKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRL 191
Query: 1228 SKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLME 1287
E VD++S G++L+ +L G P+ + H + I + P + + L++
Sbjct: 192 YAGPE-VDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFY--TPQYLNPSVISLLK 248
Query: 1288 QCWAPDPVVRPSFTEI 1303
DP+ R + +I
Sbjct: 249 HMLQVDPMKRATIKDI 264
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 1047 LKELGSGTFGTVYHGKWR--GTDVAIKRIKKS-CFTGRSSEQERLTLEFWREAEILSKLH 1103
++ LGSG F V+ K R G A+K IKKS F S E E +L K+
Sbjct: 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENE---------IAVLKKIK 64
Query: 1104 HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEY 1163
H N+V + + L V + + G L +L + + ++ L+I + ++Y
Sbjct: 65 HENIVTLEDIYESTTHYYL--VMQLVSGGELFDRILERGVYTEKDASLVIQQVLS-AVKY 121
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELL 1223
LH IVH DLK +NLL + I + DFGLSK+++N +++ GT ++APE+L
Sbjct: 122 LHENGIVHRDLKPENLLYLTPEENSKI-MITDFGLSKMEQNGIMSTAC-GTPGYVAPEVL 179
Query: 1224 NGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ S+ VD +S G++ + +L G P+
Sbjct: 180 --AQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 116/273 (42%), Gaps = 30/273 (10%)
Query: 1040 KNEDLEELKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
K ED + LG G+F VY + G +VAIK I K ++ + + E +
Sbjct: 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDK-----KAMYKAGMVQRVQNEVK 63
Query: 1098 ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
I +L HP+++ Y +D + V E NG + L ++ + +
Sbjct: 64 IHCQLKHPSILELYNYFEDS--NYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQI 121
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLP 1216
GM YLHS I+H DL NLL+ I K+ DFGL +++K + GT
Sbjct: 122 ITGMLYLHSHGILHRDLTLSNLLLTRNMNI----KIADFGLATQLKMPHEKHYTLCGTPN 177
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPV-- 1274
+++PE+ S+ + DV+S G + + +L G P+ V NTL V
Sbjct: 178 YISPEIATRSAHGLES--DVWSLGCMFYTLLIGRPPFDT--------DTVKNTLNKVVLA 227
Query: 1275 ----PGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
P F E + L+ Q +P R S + +
Sbjct: 228 DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSV 260
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 16/215 (7%)
Query: 1041 NEDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
N D++E ELG G F V K G + A K I + R ++ LE REA I
Sbjct: 30 NYDVKE--ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK----LE--REARI 81
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
KL HPN+V + +Q+ L V + + G L ++++E + + I
Sbjct: 82 CRKLQHPNIVRLHDSIQEESFHYL--VFDLVTGGELFEDIVAREFYSEADASHCI-QQIL 138
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWM 1218
+ Y HS IVH +LK +NLL+ K + K+ DFGL+ ++ G GT ++
Sbjct: 139 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAV-KLADFGLAIEVNDSEAWHGFAGTPGYL 197
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+PE+L S+ VD+++ G++L+ +L G P+
Sbjct: 198 SPEVLK--KDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 12/208 (5%)
Query: 1047 LKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPN 1106
L+ELGSG FG V+ R + A R+ + F ++ T++ E I+++LHHP
Sbjct: 56 LEELGSGAFGVVH----RCVEKATGRVFVAKFINTPYPLDKYTVK--NEISIMNQLHHPK 109
Query: 1107 VVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHS 1166
++ + +D + + EF+ G L + +++ + + + A G++++H
Sbjct: 110 LINLHDAFEDK--YEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE 167
Query: 1167 KNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGS 1226
+IVH D+K +N++ K K+ DFGL+ + T + APE+++
Sbjct: 168 HSIVHLDIKPENIMCETKKASS--VKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVD-- 223
Query: 1227 SSKVSEKVDVFSFGIVLWEILTGEEPYA 1254
V D+++ G++ + +L+G P+A
Sbjct: 224 REPVGFYTDMWAIGVLGYVLLSGLSPFA 251
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 31/227 (13%)
Query: 1042 EDLEELKE-LGSGTFGTVYHGKWR--GTDVAIKRIKKSCFT---GRSSEQERLTLEFWRE 1095
ED+ EL E +G G F V R G A+K + + FT G S+E + RE
Sbjct: 23 EDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK------RE 76
Query: 1096 AEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--------ERHLDR 1147
A I L HP++V G L V EFM L ++ + E
Sbjct: 77 ASICHMLKHPHIVELLETYSSD--GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTL 1206
R I+ + Y H NI+H D+K +N+L+ K+ P+ K+GDFG++ ++ + L
Sbjct: 135 YMRQILE-----ALRYCHDNNIIHRDVKPENVLLASKENSAPV-KLGDFGVAIQLGESGL 188
Query: 1207 VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
V GG GT +MAPE++ + VDV+ G++L+ +L+G P+
Sbjct: 189 VAGGRVGTPHFMAPEVVK--REPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
Length = 294
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 34/227 (14%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
I NE + + +LG G TVY + T + IK K+ F ++E L F RE
Sbjct: 8 IINERYKIVDKLGGGGMSTVYLAE--DTILNIKVAIKAIFIPPREKEETLK-RFEREVHN 64
Query: 1099 LSKLHHPNVVA----------FYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR 1148
S+L H N+V+ +Y V++ G TL+ E H LS + ++
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE-------SHGPLSVDTAINFT 117
Query: 1149 KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT 1208
+++ G+++ H IVH D+K N+L++ + K+ DFG++K T +T
Sbjct: 118 NQIL------DGIKHAHDMRIVHRDIKPQNILIDSNKTL----KIFDFGIAKALSETSLT 167
Query: 1209 --GGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
V GT+ + +PE G ++ E D++S GIVL+E+L GE P+
Sbjct: 168 QTNHVLGTVQYFSPEQAKGEAT--DECTDIYSIGIVLYEMLVGEPPF 212
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 1040 KNED-----LEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEF 1092
+NED E L+ +G G+FG V + T A+K + K R+ +
Sbjct: 8 ENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRN-----V 62
Query: 1093 WREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI 1152
++E +I+ L HP +V + QD + V + ++ G LR+ L + +L
Sbjct: 63 FKELQIMQGLEHPFLVNLWYSFQDEED--MFMVVDLLLGGDLRYHLQQNVHFKEETVKLF 120
Query: 1153 IAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRNTLVTGGV 1211
I + ++YL ++ I+H D+K DN+L++ + + DF ++ + R T +T +
Sbjct: 121 IC-ELVMALDYLQNQRIIHRDMKPDNILLDEHGHVH----ITDFNIAAMLPRETQIT-TM 174
Query: 1212 RGTLPWMAPELLNGSS-SKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT P+MAPE+ + + S VD +S G+ +E+L G PY
Sbjct: 175 AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 118/277 (42%), Gaps = 26/277 (9%)
Query: 1036 LQIIKNEDLEEL-KELGSGTFGT--VYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEF 1092
L I+ + D EL K++GSG FG + K VA+K I++ E++
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG---------EKIAANV 62
Query: 1093 WREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI 1152
RE L HPN+V F V+ LA V E+ G L + + R + R
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTP--THLAIVMEYASGGELFERICNAGRFSEDEARFF 120
Query: 1153 IAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR 1212
+ G+ Y H+ + H DLK +N L L P K+ DFG SK
Sbjct: 121 FQQLIS-GVSYCHAMQVCHRDLKLENTL--LDGSPAPRLKICDFGYSKSSVLHSQPKSTV 177
Query: 1213 GTLPWMAPELL--NGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN----MHYGAIIGGIV 1266
GT ++APE+L KV+ DV+S G+ L+ +L G P+ + ++ I I+
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 1267 NNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
N P E R L+ + + DP R S EI
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
+K++D E++ ELG+G G V+ + + + + R K + + + ++ RE ++
Sbjct: 65 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMAR-KLIHLEIKPAIRNQII----RELQV 119
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L + + P +V FYG G ++ E M GSL V L K + + +++
Sbjct: 120 LHECNSPYIVGFYGAFYS--DGEISICMEHMDGGSLDQV-LKKAGRIPEQILGKVSIAVI 176
Query: 1159 FGMEYLHSKN-IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPW 1217
G+ YL K+ I+H D+K N+LVN + I K+ DFG+S +++ V GT +
Sbjct: 177 KGLTYLREKHKIMHRDVKPSNILVNSRGEI----KLCDFGVSGQLIDSMANSFV-GTRSY 231
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEP 1252
M+PE L G+ V D++S G+ L E+ G P
Sbjct: 232 MSPERLQGTHYSVQS--DIWSMGLSLVEMAVGRYP 264
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 8/185 (4%)
Query: 1091 EFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKR 1150
+ ++E IL KL HPNVV V+ D L V E + G + V K D+ +
Sbjct: 82 QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR- 140
Query: 1151 LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLVTG 1209
D G+EYLH + I+H D+K NLLV I K+ DFG+S + K + +
Sbjct: 141 -FYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHI----KIADFGVSNEFKGSDALLS 195
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEK-VDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNN 1268
GT +MAPE L+ + S K +DV++ G+ L+ + G+ P+ + + I +
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQ 255
Query: 1269 TLRPP 1273
L P
Sbjct: 256 ALEFP 260
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind
E804
Length = 324
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 1046 ELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLH 1103
+L +LG GT+ TVY GK + TD VA+K I R +E RE +L L
Sbjct: 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEI-------RLEHEEGAPCTAIREVSLLKDLK 58
Query: 1104 HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEY 1163
H N+V + ++ TL V E++ + L+ L ++ + G+ Y
Sbjct: 59 HANIVTLHDIIHTEKSLTL--VFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAY 115
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR-NTLVTGGVRGTLPWMAPEL 1222
H + ++H DLK NLL+N + + K+ DFGL++ K T TL + P++
Sbjct: 116 CHRQKVLHRDLKPQNLLINERGEL----KLADFGLARAKSIPTKTYDNEVVTLWYRPPDI 171
Query: 1223 LNGSSSKVSEKVDVFSFGIVLWEILTG 1249
L GS+ S ++D++ G + +E+ TG
Sbjct: 172 LLGSTD-YSTQIDMWGVGCIFYEMATG 197
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 21/213 (9%)
Query: 1044 LEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK 1101
L+ ++G G+ G V + + G VA+K + +Q+R L F E I+
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMD-------LRKQQRRELLF-NEVVIMRD 98
Query: 1102 LHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
H NVV Y G L + EF+ G+L ++ + L+ + + +
Sbjct: 99 YQHFNVVEMYK--SYLVGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQAL 154
Query: 1162 EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMAP 1220
YLH++ ++H D+K D++L+ L + K+ DFG ++I ++ + GT WMAP
Sbjct: 155 AYLHAQGVIHRDIKSDSILLTLDGRV----KLSDFGFCAQISKDVPKRKXLVGTPYWMAP 210
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
E++ S S + +VD++S GI++ E++ GE PY
Sbjct: 211 EVI--SRSLYATEVDIWSLGIMVIEMVDGEPPY 241
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 6 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXI 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 105
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 106 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 159
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 160 ERLLNKMXGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 16/215 (7%)
Query: 1041 NEDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
N D++E ELG G F V K G + A K I + R ++ LE REA I
Sbjct: 7 NYDVKE--ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK----LE--REARI 58
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
KL HPN+V + +Q+ L V + + G L ++++E + + I
Sbjct: 59 CRKLQHPNIVRLHDSIQEESFHYL--VFDLVTGGELFEDIVAREFYSEADASHCIQQILE 116
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWM 1218
+ Y HS IVH +LK +NLL+ K + K+ DFGL+ ++ G GT ++
Sbjct: 117 -SIAYCHSNGIVHRNLKPENLLLASKAKGAAV-KLADFGLAIEVNDSEAWHGFAGTPGYL 174
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+PE+L S+ VD+++ G++L+ +L G P+
Sbjct: 175 SPEVLK--KDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 16/215 (7%)
Query: 1041 NEDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
N D++E ELG G F V K G + A K I + R ++ LE REA I
Sbjct: 6 NYDVKE--ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK----LE--REARI 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
KL HPN+V + +Q+ L V + + G L ++++E + + I
Sbjct: 58 CRKLQHPNIVRLHDSIQEESFHYL--VFDLVTGGELFEDIVAREFYSEADASHCIQQILE 115
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWM 1218
+ Y HS IVH +LK +NLL+ K + K+ DFGL+ ++ G GT ++
Sbjct: 116 -SIAYCHSNGIVHRNLKPENLLLASKAKGAAV-KLADFGLAIEVNDSEAWHGFAGTPGYL 173
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+PE+L S+ VD+++ G++L+ +L G P+
Sbjct: 174 SPEVLK--KDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1044 LEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK 1101
L+ ++G G+ G V R G VA+K++ +Q+R L F E I+
Sbjct: 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD-------LRKQQRRELLF-NEVVIMRD 204
Query: 1102 LHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
H NVV Y G L V EF+ G+L ++ + ++ + +A+ A +
Sbjct: 205 YQHENVVEMYNSYLVG--DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV 262
Query: 1162 EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMAP 1220
LH++ ++H D+K D++L+ + K+ DFG +++ + + GT WMAP
Sbjct: 263 --LHAQGVIHRDIKSDSILLTHDGRV----KLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 316
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
EL+ S +VD++S GI++ E++ GE PY N
Sbjct: 317 ELI--SRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 349
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 16/215 (7%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
+K++D E + ELG+G G V + R + + + R K + + + ++ RE ++
Sbjct: 13 LKDDDFERISELGAGNGGVVTKVQHRPSGLIMAR-KLIHLEIKPAIRNQII----RELQV 67
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L + + P +V FYG G ++ E M GSL VL +R + +++
Sbjct: 68 LHECNSPYIVGFYGAFYS--DGEISICMEHMDGGSLDQVLKEAKR-IPEEILGKVSIAVL 124
Query: 1159 FGMEYLHSKN-IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPW 1217
G+ YL K+ I+H D+K N+LVN + I K+ DFG+S +++ V GT +
Sbjct: 125 RGLAYLREKHQIMHRDVKPSNILVNSRGEI----KLCDFGVSGQLIDSMANSFV-GTRSY 179
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEP 1252
MAPE L G+ V D++S G+ L E+ G P
Sbjct: 180 MAPERLQGTHYSVQS--DIWSMGLSLVELAVGRYP 212
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 1050 LGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS--KLHHP 1105
LG G+FG V+ K + G A+K+++ LE +R E+++ L P
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR---------------LEVFRVEELVACAGLSSP 124
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
+V YG V++GP + E + GSL L+ + L + L A G+EYLH
Sbjct: 125 RIVPLYGAVREGP--WVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEYLH 181
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR-----NTLVTGG-VRGTLPWMA 1219
++ I+H D+K DN+L++ +C DFG + + +L+TG + GT MA
Sbjct: 182 TRRILHGDVKADNVLLSSDGSRAALC---DFGHALCLQPDGLGKSLLTGDYIPGTETHMA 238
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
PE++ G KVD++S ++ +L G P+ G +
Sbjct: 239 PEVVMGKPCDA--KVDIWSSCCMMLHMLNGCHPWTQYFRGPLC 279
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
Length = 301
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 130/306 (42%), Gaps = 58/306 (18%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK- 1101
D+ L+ +G G +G V+ G W+G +VA+K F+ R + ++RE E+ +
Sbjct: 9 DITLLECVGKGRYGEVWRGSWQGENVAVK-----IFSSRDEK------SWFRETELYNTV 57
Query: 1102 -LHHPNVVAFYG--VVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L H N++ F + L +T + GSL L + LD L I + A
Sbjct: 58 MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIA 115
Query: 1159 FGMEYLHSK--------NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI---KRNTLV 1207
G+ +LH + I H DLK N+LV C + D GL+ + N L
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQ----CCIADLGLAVMHSQSTNQLD 171
Query: 1208 TGG--VRGTLPWMAPELLNGS----SSKVSEKVDVFSFGIVLWEILTGE------EPYAN 1255
G GT +MAPE+L+ + ++VD+++FG+VLWE+ E Y
Sbjct: 172 VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231
Query: 1256 MHYGAIIGG---------IVNNTLRPPVPGFCDSEWRL-----LMEQCWAPDPVVRPSFT 1301
Y + + + RP +P S+ L LM++CW +P R +
Sbjct: 232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTAL 291
Query: 1302 EIARRL 1307
I + L
Sbjct: 292 RIKKTL 297
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 16/215 (7%)
Query: 1041 NEDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
N D++E ELG G F V K G + A K I + R ++ LE REA I
Sbjct: 7 NYDVKE--ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK----LE--REARI 58
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
KL HPN+V + +Q+ L V + + G L ++++E + + I
Sbjct: 59 CRKLQHPNIVRLHDSIQEESFHYL--VFDLVTGGELFEDIVAREFYSEADASHCIQQILE 116
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWM 1218
+ Y HS IVH +LK +NLL+ K + K+ DFGL+ ++ G GT ++
Sbjct: 117 -SIAYCHSNGIVHRNLKPENLLLASKAKGAAV-KLADFGLAIEVNDSEAWHGFAGTPGYL 174
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+PE+L S+ VD+++ G++L+ +L G P+
Sbjct: 175 SPEVLK--KDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 118/277 (42%), Gaps = 26/277 (9%)
Query: 1036 LQIIKNEDLEEL-KELGSGTFGT--VYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEF 1092
L I+ + D EL K++GSG FG + K VA+K I++ E++
Sbjct: 11 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG---------EKIDENV 61
Query: 1093 WREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI 1152
RE L HPN+V F V+ LA V E+ G L + + R + R
Sbjct: 62 KREIINHRSLRHPNIVRFKEVILTP--THLAIVMEYASGGELFERICNAGRFSEDEARFF 119
Query: 1153 IAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR 1212
+ G+ Y H+ + H DLK +N L L P K+ DFG SK
Sbjct: 120 FQQLIS-GVSYCHAMQVCHRDLKLENTL--LDGSPAPRLKICDFGYSKSSVLHSQPKSTV 176
Query: 1213 GTLPWMAPELL--NGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN----MHYGAIIGGIV 1266
GT ++APE+L KV+ DV+S G+ L+ +L G P+ + ++ I I+
Sbjct: 177 GTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 233
Query: 1267 NNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
N P E R L+ + + DP R S EI
Sbjct: 234 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 270
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 131/316 (41%), Gaps = 84/316 (26%)
Query: 1050 LGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK--LHHPNV 1107
+G G +G V+ G W G VA+K F+ R + ++RE EI + L H N+
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVK-----IFSSRDEQ------SWFRETEIYNTVLLRHDNI 64
Query: 1108 VAFYG--VVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
+ F + L +T + +GSL L + + L+ L +A+ AA G+ +LH
Sbjct: 65 LGFIASDMTSRNSSTQLWLITHYHEHGSLYDFL--QRQTLEPHLALRLAVSAACGLAHLH 122
Query: 1166 SK--------NIVHFDLKCDNLLV--NLKDPIRPICKVGDFGLSKIK---RNTLVTGG-- 1210
+ I H D K N+LV NL+ C + D GL+ + + L G
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQ------CCIADLGLAVMHSQGSDYLDIGNNP 176
Query: 1211 VRGTLPWMAPELLN----GSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIV 1266
GT +MAPE+L+ + + D+++FG+VLWEI I+ GIV
Sbjct: 177 RVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIAR----------RTIVNGIV 226
Query: 1267 NNTLRPPV-------PGFCD------------------------SEWRLLMEQCWAPDPV 1295
+ RPP P F D S +M +CW P+P
Sbjct: 227 ED-YRPPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPS 285
Query: 1296 VRPSFTEIARRLRVMS 1311
R + I + L+ +S
Sbjct: 286 ARLTALRIKKTLQKIS 301
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 7 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXI 58
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 106
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 107 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 160
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 161 ERLLNKMXGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 118/277 (42%), Gaps = 26/277 (9%)
Query: 1036 LQIIKNEDLEEL-KELGSGTFGT--VYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEF 1092
L I+ + D EL K++G+G FG + K VA+K I++ E++
Sbjct: 12 LPIMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERG---------EKIDENV 62
Query: 1093 WREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI 1152
RE L HPN+V F V+ LA V E+ G L + + R + R
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTP--THLAIVMEYASGGELFERICNAGRFSEDEARFF 120
Query: 1153 IAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR 1212
+ G+ Y H+ + H DLK +N L L P K+ DFG SK
Sbjct: 121 FQQLIS-GVSYAHAMQVAHRDLKLENTL--LDGSPAPRLKIADFGYSKASVLHSQPKSAV 177
Query: 1213 GTLPWMAPELL--NGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN----MHYGAIIGGIV 1266
GT ++APE+L KV+ DV+S G+ L+ +L G P+ + ++ I I+
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 1267 NNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
N P E R L+ + + DP R S EI
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps182 Bound To The Pif-Pocket
Length = 311
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 29/236 (12%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 86
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 87 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 143
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANXFV---- 195
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVN 1267
GT +++PELL S+ S D+++ G ++++++ G P+ + G I I+
Sbjct: 196 -GTAQYVSPELLTEKSAXKSS--DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK 248
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 6 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXI 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 105
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 106 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 159
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
Length = 333
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
+K++D E++ ELG+G G V+ + + + + R K + + + ++ RE ++
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMAR-KLIHLEIKPAIRNQII----RELQV 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L + + P +V FYG G ++ E M GSL V L K + + +++
Sbjct: 58 LHECNSPYIVGFYGAFYS--DGEISICMEHMDGGSLDQV-LKKAGRIPEQILGKVSIAVI 114
Query: 1159 FGMEYLHSKN-IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPW 1217
G+ YL K+ I+H D+K N+LVN + I K+ DFG+S +++ V GT +
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEI----KLCDFGVSGQLIDSMANSFV-GTRSY 169
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEP 1252
M+PE L G+ V D++S G+ L E+ G P
Sbjct: 170 MSPERLQGTHYSVQS--DIWSMGLSLVEMAVGRYP 202
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex
With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex
With Ch4858061 And Mgatp
Length = 307
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
+K++D E++ ELG+G G V+ + + + + R K + + + ++ RE ++
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMAR-KLIHLEIKPAIRNQII----RELQV 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L + + P +V FYG G ++ E M GSL V L K + + +++
Sbjct: 58 LHECNSPYIVGFYGAFYS--DGEISICMEHMDGGSLDQV-LKKAGRIPEQILGKVSIAVI 114
Query: 1159 FGMEYLHSKN-IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPW 1217
G+ YL K+ I+H D+K N+LVN + I K+ DFG+S +++ V GT +
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEI----KLCDFGVSGQLIDSMANSFV-GTRSY 169
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEP 1252
M+PE L G+ V D++S G+ L E+ G P
Sbjct: 170 MSPERLQGTHYSVQS--DIWSMGLSLVEMAVGRYP 202
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 6 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 105
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 106 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 159
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 160 ERLLNKMXGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 6 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 105
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 106 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 159
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 160 ERLLNKMXGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 6 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 105
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 106 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 159
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212 Interactions
Length = 341
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
+K++D E++ ELG+G G V+ + + + + R K + + + ++ RE ++
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMAR-KLIHLEIKPAIRNQII----RELQV 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L + + P +V FYG G ++ E M GSL V L K + + +++
Sbjct: 58 LHECNSPYIVGFYGAFYS--DGEISICMEHMDGGSLDQV-LKKAGRIPEQILGKVSIAVI 114
Query: 1159 FGMEYLHSKN-IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPW 1217
G+ YL K+ I+H D+K N+LVN + I K+ DFG+S +++ V GT +
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEI----KLCDFGVSGQLIDSMANSFV-GTRSY 169
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEP 1252
M+PE L G+ V D++S G+ L E+ G P
Sbjct: 170 MSPERLQGTHYSVQS--DIWSMGLSLVEMAVGRYP 202
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound
1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a And
Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
+K++D E++ ELG+G G V+ + + + + R K + + + ++ RE ++
Sbjct: 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMAR-KLIHLEIKPAIRNQII----RELQV 84
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L + + P +V FYG G ++ E M GSL V L K + + +++
Sbjct: 85 LHECNSPYIVGFYGAFYS--DGEISICMEHMDGGSLDQV-LKKAGRIPEQILGKVSIAVI 141
Query: 1159 FGMEYLHSKN-IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPW 1217
G+ YL K+ I+H D+K N+LVN + I K+ DFG+S +++ V GT +
Sbjct: 142 KGLTYLREKHKIMHRDVKPSNILVNSRGEI----KLCDFGVSGQLIDSMANSFV-GTRSY 196
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEP 1252
M+PE L G+ V D++S G+ L E+ G P
Sbjct: 197 MSPERLQGTHYSVQS--DIWSMGLSLVEMAVGRYP 229
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1044 LEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK 1101
L+ ++G G+ G V R G VA+K++ +Q+R L F E I+
Sbjct: 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD-------LRKQQRRELLF-NEVVIMRD 127
Query: 1102 LHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
H NVV Y G L V EF+ G+L ++ + ++ + +A+ A +
Sbjct: 128 YQHENVVEMYNSYLVG--DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV 185
Query: 1162 EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMAP 1220
LH++ ++H D+K D++L+ + K+ DFG +++ + + GT WMAP
Sbjct: 186 --LHAQGVIHRDIKSDSILLTHDGRV----KLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 239
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
EL+ S +VD++S GI++ E++ GE PY N
Sbjct: 240 ELI--SRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 272
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In
Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps210 Bound To The Pif-Pocket
Length = 311
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 29/236 (12%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 86
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 87 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 143
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANXFV---- 195
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVN 1267
GT +++PELL S+ S D+++ G ++++++ G P+ + G I I+
Sbjct: 196 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK 248
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 7 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 58
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 106
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 107 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 160
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 19/221 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
+K ED E +K +G G FG V + + T A+K + K RS + FW E
Sbjct: 66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSD-----SAFFWEER 120
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
+I++ + P VV + QD L V E+M G L + L+S ++ R A +
Sbjct: 121 DIMAFANSPWVVQLFYAFQDD--RYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTA-E 176
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLV-TGGVRGT 1214
++ +HS +H D+K DN+L++ + K+ DFG K+ + +V GT
Sbjct: 177 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHL----KLADFGTCMKMNKEGMVRCDTAVGT 232
Query: 1215 LPWMAPELLN--GSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+++PE+L G + D +S G+ L+E+L G+ P+
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 1050 LGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS--KLHHP 1105
+G G+FG V+ K + G A+K+++ LE +R E+++ L P
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR---------------LEVFRVEELVACAGLSSP 110
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
+V YG V++GP + E + GSL L+ + L + L A G+EYLH
Sbjct: 111 RIVPLYGAVREGP--WVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEYLH 167
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR-----NTLVTGG-VRGTLPWMA 1219
++ I+H D+K DN+L++ +C DFG + + +L+TG + GT MA
Sbjct: 168 TRRILHGDVKADNVLLSSDGSRAALC---DFGHALCLQPDGLGKSLLTGDYIPGTETHMA 224
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
PE++ G KVD++S ++ +L G P+ G +
Sbjct: 225 PEVVMGKPCDA--KVDIWSSCCMMLHMLNGCHPWTQYFRGPLC 265
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 19/221 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
+K ED E +K +G G FG V + + T A+K + K RS + FW E
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSD-----SAFFWEER 125
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
+I++ + P VV + QD L V E+M G L + L+S ++ R A +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDR--YLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTA-E 181
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLV-TGGVRGT 1214
++ +HS +H D+K DN+L++ + K+ DFG K+ + +V GT
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHL----KLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 1215 LPWMAPELLN--GSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+++PE+L G + D +S G+ L+E+L G+ P+
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 7 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 58
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
+ L+H NVV FYG ++G L E+ G L DR
Sbjct: 59 NAMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 106
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 107 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 160
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
+K++D E++ ELG+G G V+ + + + + R K + + + ++ RE ++
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMAR-KLIHLEIKPAIRNQII----RELQV 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L + + P +V FYG G ++ E M GSL V L K + + +++
Sbjct: 58 LHECNSPYIVGFYGAFYS--DGEISICMEHMDGGSLDQV-LKKAGRIPEQILGKVSIAVI 114
Query: 1159 FGMEYLHSKN-IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPW 1217
G+ YL K+ I+H D+K N+LVN + I K+ DFG+S +++ V GT +
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEI----KLCDFGVSGQLIDSMANSFV-GTRSY 169
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEP 1252
M+PE L G+ V D++S G+ L E+ G P
Sbjct: 170 MSPERLQGTHYSVQS--DIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
+K++D E++ ELG+G G V+ + + + + R K + + + ++ RE ++
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMAR-KLIHLEIKPAIRNQII----RELQV 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L + + P +V FYG G ++ E M GSL V L K + + +++
Sbjct: 58 LHECNSPYIVGFYGAFYS--DGEISICMEHMDGGSLDQV-LKKAGRIPEQILGKVSIAVI 114
Query: 1159 FGMEYLHSKN-IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPW 1217
G+ YL K+ I+H D+K N+LVN + I K+ DFG+S +++ V GT +
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEI----KLCDFGVSGQLIDSMANSFV-GTRSY 169
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEP 1252
M+PE L G+ V D++S G+ L E+ G P
Sbjct: 170 MSPERLQGTHYSVQS--DIWSMGLSLVEMAVGRYP 202
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 1050 LGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS--KLHHP 1105
+G G+FG V+ K + G A+K+++ LE +R E+++ L P
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR---------------LEVFRVEELVACAGLSSP 126
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
+V YG V++GP + E + GSL L+ + L + L A G+EYLH
Sbjct: 127 RIVPLYGAVREGP--WVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEYLH 183
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR-----NTLVTGG-VRGTLPWMA 1219
++ I+H D+K DN+L++ +C DFG + + +L+TG + GT MA
Sbjct: 184 TRRILHGDVKADNVLLSSDGSRAALC---DFGHALCLQPDGLGKSLLTGDYIPGTETHMA 240
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
PE++ G KVD++S ++ +L G P+ G +
Sbjct: 241 PEVVMGKPCDA--KVDIWSSCCMMLHMLNGCHPWTQYFRGPLC 281
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A
Putative Auto-Inhibition State
Length = 340
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 19/222 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
+K +DLE + ELG G +G V + G +A+KRI+ T S EQ+RL ++
Sbjct: 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRA---TVNSQEQKRLLMDL---- 100
Query: 1097 EI-LSKLHHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIA 1154
+I + + P V FYG + ++G + + ++ + V + K + + IA
Sbjct: 101 DISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQV-IDKGQTIPEDILGKIA 159
Query: 1155 MDAAFGMEYLHSK-NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ +E+LHSK +++H D+K N+L+N + K+ DFG+S +++ G
Sbjct: 160 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQV----KMCDFGISGYLVDSVAKTIDAG 215
Query: 1214 TLPWMAPELLNGSSSK--VSEKVDVFSFGIVLWEILTGEEPY 1253
P+MAPE +N ++ S K D++S GI + E+ PY
Sbjct: 216 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY 257
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 6 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 105
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 106 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 159
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 6 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 105
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 106 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 159
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 160 ERLLNKMXGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 5 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 56
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 57 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 104
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 105 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 158
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 159 ERLLNKMCGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 206
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 25/224 (11%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
+K ED E +K +G G FG V + + T A+K + K RS + FW E
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSD-----SAFFWEER 125
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
+I++ + P VV + QD L V E+M G L + L+S ++ R A +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDR--YLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTA-E 181
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR---- 1212
++ +HS +H D+K DN+L++ + K+ DFG + +K N G VR
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHL----KLADFG-TCMKMNK--EGMVRCDTA 234
Query: 1213 -GTLPWMAPELLN--GSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PE+L G + D +S G+ L+E+L G+ P+
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 7 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 58
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 106
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 107 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 160
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 7 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 58
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 106
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 107 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 160
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 7 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 58
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 106
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 107 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 160
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase Erk1
Length = 382
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 26/223 (11%)
Query: 1046 ELKELGSGTFGTV--YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLH 1103
+L+ +G G +G V + R T VAIK+I S F ++ Q L RE +IL +
Sbjct: 47 QLQYIGEGAYGMVSSAYDHVRKTRVAIKKI--SPFEHQTYCQRTL-----REIQILLRFR 99
Query: 1104 HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHV---LLSKERHLDRRKRLIIAMDAAFG 1160
H NV+ +++ TL + + + L L K + L G
Sbjct: 100 HENVIGIRDILR---ASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRG 156
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTL 1215
++Y+HS N++H DLK NLL+N + K+ DFGL++I +T V T
Sbjct: 157 LKYIHSANVLHRDLKPSNLLINTTCDL----KICDFGLARIADPEHDHTGFLTEXV-ATR 211
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
+ APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 212 WYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 253
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 18/244 (7%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
+ ED E LK +G G FG V K + D A+K + K R+ T F E
Sbjct: 71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAE-----TACFREER 125
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
++L + + QD L V ++ V G L +L E L +
Sbjct: 126 DVLVNGDSKWITTLHYAFQDD--NNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAE 183
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFG--LSKIKRNTLVTGGVRGT 1214
++ +H + VH D+K DN+L+++ IR + DFG L ++ T+ + GT
Sbjct: 184 MVIAIDSVHQLHYVHRDIKPDNILMDMNGHIR----LADFGSCLKLMEDGTVQSSVAVGT 239
Query: 1215 LPWMAPELLN---GSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLR 1271
+++PE+L G + + D +S G+ ++E+L GE P+ G I+N+ R
Sbjct: 240 PDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER 299
Query: 1272 PPVP 1275
P
Sbjct: 300 FQFP 303
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 1095 EAEILSKL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
E EIL + HPN++ V DG L VTE M G L +L +++ R+ +
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDDGKHVYL--VTELMRGGELLDKIL-RQKFFSEREASFV 126
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPIC-KVGDFGLSKIKR--NTLVTGG 1210
+EYLHS+ +VH DLK N+L + + P C ++ DFG +K R N L+
Sbjct: 127 LHTIGKTVEYLHSQGVVHRDLKPSNILY-VDESGNPECLRICDFGFAKQLRAENGLLMTP 185
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
T ++APE+L E D++S GI+L+ +L G P+AN
Sbjct: 186 CY-TANFVAPEVLK--RQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1044 LEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK 1101
L+ ++G G+ G V R G VA+K++ +Q+R L F E I+
Sbjct: 33 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD-------LRKQQRRELLF-NEVVIMRD 84
Query: 1102 LHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
H NVV Y G L V EF+ G+L ++ + ++ + +A+ A +
Sbjct: 85 YQHENVVEMYNSYLVG--DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV 142
Query: 1162 EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMAP 1220
LH++ ++H D+K D++L+ + K+ DFG +++ + + GT WMAP
Sbjct: 143 --LHAQGVIHRDIKSDSILLTHDGRV----KLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 196
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
EL+ S +VD++S GI++ E++ GE PY N
Sbjct: 197 ELI--SRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 229
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 86
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 87 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGCLLKYI-RKIGSFDETCTRFYTAEIVS 143
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N+ V
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANSFV---- 195
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S+ D+++ G ++++++ G P+
Sbjct: 196 -GTAQYVSPELLTEKSA--SKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint Kinase
1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint Kinase
1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 7 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 58
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 106
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 107 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 160
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 6 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 105
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 106 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 159
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1
Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human Chk1
Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 6 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 105
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 106 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 159
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 28/224 (12%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTG----RSSEQERLTLEF 1092
+K D L LG G+FG V + +GTD A+K +KK + E+ L
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 397
Query: 1093 WREAEILSKLH--HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKR 1150
+ L++LH + Y V++ GG L ++ V KE H
Sbjct: 398 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY--------HIQQVGRFKEPHA----- 444
Query: 1151 LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-RNTLVTG 1209
+ A + A G+ +L SK I++ DLK DN++++ + I K+ DFG+ K + + T
Sbjct: 445 VFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHI----KIADFGMCKENIWDGVTTK 500
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT ++APE++ + + VD ++FG++L+E+L G+ P+
Sbjct: 501 XFCGTPDYIAPEII--AYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 128/302 (42%), Gaps = 58/302 (19%)
Query: 1047 LKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK--LHH 1104
L+ +G G +G V+ G W+G +VA+K F+ R + ++RE E+ + L H
Sbjct: 42 LECVGKGRYGEVWRGSWQGENVAVK-----IFSSRDEK------SWFRETELYNTVMLRH 90
Query: 1105 PNVVAFYG--VVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
N++ F + L +T + GSL L + LD L I + A G+
Sbjct: 91 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLA 148
Query: 1163 YLHSK--------NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI---KRNTLVTGG- 1210
+LH + I H DLK N+LV C + D GL+ + N L G
Sbjct: 149 HLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQ----CCIADLGLAVMHSQSTNQLDVGNN 204
Query: 1211 -VRGTLPWMAPELLNGS----SSKVSEKVDVFSFGIVLWEILTGE------EPYANMHYG 1259
GT +MAPE+L+ + ++VD+++FG+VLWE+ E Y Y
Sbjct: 205 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD 264
Query: 1260 AIIGG---------IVNNTLRPPVPGFCDSEWRL-----LMEQCWAPDPVVRPSFTEIAR 1305
+ + + RP +P S+ L LM++CW +P R + I +
Sbjct: 265 VVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 324
Query: 1306 RL 1307
L
Sbjct: 325 TL 326
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 6 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 105
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 106 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 159
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex
With A Consensus Peptide
Length = 301
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1044 LEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK 1101
L+ ++G G+ G V R G VA+K++ +Q+R L F E I+
Sbjct: 31 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD-------LRKQQRRELLF-NEVVIMRD 82
Query: 1102 LHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
H NVV Y G L V EF+ G+L ++ + ++ + +A+ A +
Sbjct: 83 YQHENVVEMYNSYLVG--DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV 140
Query: 1162 EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMAP 1220
LH++ ++H D+K D++L+ + K+ DFG +++ + + GT WMAP
Sbjct: 141 --LHAQGVIHRDIKSDSILLTHDGRV----KLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 194
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
EL+ S +VD++S GI++ E++ GE PY N
Sbjct: 195 ELI--SRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 227
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 6 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 105
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 106 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 159
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 128/302 (42%), Gaps = 58/302 (19%)
Query: 1047 LKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK--LHH 1104
L+ +G G +G V+ G W+G +VA+K F+ R + ++RE E+ + L H
Sbjct: 13 LECVGKGRYGEVWRGSWQGENVAVK-----IFSSRDEK------SWFRETELYNTVMLRH 61
Query: 1105 PNVVAFYG--VVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
N++ F + L +T + GSL L + LD L I + A G+
Sbjct: 62 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLA 119
Query: 1163 YLHSK--------NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI---KRNTLVTGG- 1210
+LH + I H DLK N+LV C + D GL+ + N L G
Sbjct: 120 HLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQ----CCIADLGLAVMHSQSTNQLDVGNN 175
Query: 1211 -VRGTLPWMAPELLNGS----SSKVSEKVDVFSFGIVLWEILTGE------EPYANMHYG 1259
GT +MAPE+L+ + ++VD+++FG+VLWE+ E Y Y
Sbjct: 176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD 235
Query: 1260 AIIGG---------IVNNTLRPPVPGFCDSEWRL-----LMEQCWAPDPVVRPSFTEIAR 1305
+ + + RP +P S+ L LM++CW +P R + I +
Sbjct: 236 VVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295
Query: 1306 RL 1307
L
Sbjct: 296 TL 297
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G +G V +A+ R+ + + + +R +E I
Sbjct: 7 EDWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 58
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 106
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 107 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 160
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase
6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein Kinase
6 (Mapk6)
Length = 320
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 112/232 (48%), Gaps = 37/232 (15%)
Query: 1046 ELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
+LK LG G G V+ D + IKK T S + L RE +I+ +L H
Sbjct: 15 DLKPLGCGGNGLVFSAVDNDCDKRVA-IKKIVLTDPQSVKHAL-----REIKIIRRLDHD 68
Query: 1106 NVVAFYGVVQDGPGGTLAT--------------VTEFMVNGSLRHVLLSKERHLDRRKRL 1151
N+V + ++ GP G+ T V E+M L +VL + L+ RL
Sbjct: 69 NIVKVFEIL--GPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL-EQGPLLEEHARL 124
Query: 1152 IIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI------KRNT 1205
+ G++Y+HS N++H DLK NL +N +D + K+GDFGL++I +
Sbjct: 125 FMY-QLLRGLKYIHSANVLHRDLKPANLFINTED---LVLKIGDFGLARIMDPHYSHKGH 180
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMH 1257
L G V T + +P LL S + ++ +D+++ G + E+LTG+ +A H
Sbjct: 181 LSEGLV--TKWYRSPRLLL-SPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 1095 EAEILSKL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
E EIL + HPN++ V DG L VTE M G L +L +++ R+ +
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDDGKHVYL--VTELMRGGELLDKIL-RQKFFSEREASFV 126
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPIC-KVGDFGLSKIKR--NTLVTGG 1210
+EYLHS+ +VH DLK N+L + + P C ++ DFG +K R N L+
Sbjct: 127 LHTIGKTVEYLHSQGVVHRDLKPSNILY-VDESGNPECLRICDFGFAKQLRAENGLLMTP 185
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
T ++APE+L E D++S GI+L+ +L G P+AN
Sbjct: 186 CY-TANFVAPEVLK--RQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 32/222 (14%)
Query: 1038 IIKNEDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWRE 1095
++ E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIRE 56
Query: 1096 AEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAM 1155
+L +L+HPN+V V+ L V EF+ H L K + + +
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPL 108
Query: 1156 DAAF------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTL 1206
++ G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 109 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTY 164
Query: 1207 VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 165 THEVV--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 203
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1044 LEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK 1101
L+ ++G G+ G V R G VA+K++ +Q+R L F E I+
Sbjct: 26 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD-------LRKQQRRELLF-NEVVIMRD 77
Query: 1102 LHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
H NVV Y G L V EF+ G+L ++ + ++ + +A+ A +
Sbjct: 78 YQHENVVEMYNSYLVG--DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV 135
Query: 1162 EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMAP 1220
LH++ ++H D+K D++L+ + K+ DFG +++ + + GT WMAP
Sbjct: 136 --LHAQGVIHRDIKSDSILLTHDGRV----KLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 189
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
EL+ S +VD++S GI++ E++ GE PY N
Sbjct: 190 ELI--SRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 222
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1044 LEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSK 1101
L+ ++G G+ G V R G VA+K++ +Q+R L F E I+
Sbjct: 22 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD-------LRKQQRRELLF-NEVVIMRD 73
Query: 1102 LHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
H NVV Y G L V EF+ G+L ++ + ++ + +A+ A +
Sbjct: 74 YQHENVVEMYNSYLVG--DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV 131
Query: 1162 EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMAP 1220
LH++ ++H D+K D++L+ + K+ DFG +++ + + GT WMAP
Sbjct: 132 --LHAQGVIHRDIKSDSILLTHDGRV----KLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 185
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
EL+ S +VD++S GI++ E++ GE PY N
Sbjct: 186 ELI--SRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 218
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 28/224 (12%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTG----RSSEQERLTLEF 1092
+K D L LG G+FG V + +GTD A+K +KK + E+ L
Sbjct: 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 76
Query: 1093 WREAEILSKLH--HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKR 1150
+ L++LH + Y V++ GG L ++ V KE H
Sbjct: 77 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY--------HIQQVGRFKEPH-----A 123
Query: 1151 LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-RNTLVTG 1209
+ A + A G+ +L SK I++ DLK DN++++ + I K+ DFG+ K + + T
Sbjct: 124 VFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHI----KIADFGMCKENIWDGVTTK 179
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT ++APE++ + + VD ++FG++L+E+L G+ P+
Sbjct: 180 XFCGTPDYIAPEII--AYQPYGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 117/277 (42%), Gaps = 26/277 (9%)
Query: 1036 LQIIKNEDLEEL-KELGSGTFGT--VYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEF 1092
L I+ + D EL K++GSG FG + K VA+K I++ E++
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG---------EKIDENV 62
Query: 1093 WREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI 1152
RE L HPN+V F V+ LA V E+ G L + + R + R
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTP--THLAIVMEYASGGELFERICNAGRFSEDEARFF 120
Query: 1153 IAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR 1212
+ G+ Y H+ + H DLK +N L L P K+ FG SK
Sbjct: 121 FQQLIS-GVSYCHAMQVCHRDLKLENTL--LDGSPAPRLKICAFGYSKSSVLHSQPKSTV 177
Query: 1213 GTLPWMAPELL--NGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN----MHYGAIIGGIV 1266
GT ++APE+L KV+ DV+S G+ L+ +L G P+ + ++ I I+
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 1267 NNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
N P E R L+ + + DP R S EI
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 58
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 59 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 110
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK +NLL+N + I K+ DFGL++ + T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAI----KLADFGLARAFGVPVRTYXHEV 166
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 167 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 201
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase-
1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine
Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 87
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 88 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 144
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N+ V
Sbjct: 145 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANSFV---- 196
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 197 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 235
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With Atp
Length = 299
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 57
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 58 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 109
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK +NLL+N + I K+ DFGL++ + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAI----KLADFGLARAFGVPVRTYXHEV 165
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 166 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 200
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With
Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With
Gold
Length = 362
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 117/277 (42%), Gaps = 26/277 (9%)
Query: 1036 LQIIKNEDLEEL-KELGSGTFGT--VYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEF 1092
L I+ + D EL K++GSG FG + K VA+K I++ E++
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG---------EKIDENV 62
Query: 1093 WREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI 1152
RE L HPN+V F V+ LA V E+ G L + + R + R
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTP--THLAIVMEYASGGELFERICNAGRFSEDEARFF 120
Query: 1153 IAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR 1212
+ G+ Y H+ + H DLK +N L L P K+ FG SK
Sbjct: 121 FQQLIS-GVSYCHAMQVCHRDLKLENTL--LDGSPAPRLKICAFGYSKSSVLHSQPKDTV 177
Query: 1213 GTLPWMAPELL--NGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN----MHYGAIIGGIV 1266
GT ++APE+L KV+ DV+S G+ L+ +L G P+ + ++ I I+
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 1267 NNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
N P E R L+ + + DP R S EI
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of 8-Anilino-1-Naphthalene
Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 63
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 64 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 115
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYTHEV 171
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 172 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 206
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
094
Length = 317
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 33/264 (12%)
Query: 1050 LGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G F Y T A K + KS + ++E+++ E I L +P+V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLL-KPHQKEKMSTEI----AIHKSLDNPHV 104
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF-------G 1160
V F+G +D + V E SL L +R++ + +A + G
Sbjct: 105 VGFHGFFEDD--DFVYVVLEICRRRSLLE--------LHKRRKAVTEPEARYFMRQTIQG 154
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMA 1219
++YLH+ ++H DLK NL +N + K+GDFGL +KI+ + + GT ++A
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDV----KIGDFGLATKIEFDGERKKDLCGTPNYIA 210
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
PE+L S +VD++S G +L+ +L G+ P+ I N VP +
Sbjct: 211 PEVLCKKGH--SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS--VPRHIN 266
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEI 1303
L+ + DP +RPS E+
Sbjct: 267 PVASALIRRMLHADPTLRPSVAEL 290
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 31/241 (12%)
Query: 1040 KNEDLEELKE--LGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWRE 1095
K ED+ +L LG G + V G + A+K I+K RS +RE
Sbjct: 9 KFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRS--------RVFRE 60
Query: 1096 AEILSKLH-HPNVVAFYGVVQDGPGGTLATVTEFMVNGS-LRHVLLSKERHLDRRKRLII 1153
E L + + N++ +D L V E + GS L H+ K++H + R+ +
Sbjct: 61 VETLYQCQGNKNILELIEFFEDDTRFYL--VFEKLQGGSILAHI--QKQKHFNEREASRV 116
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVR 1212
D A +++LH+K I H DLK +N+L + + P+ K+ DF L S +K N T
Sbjct: 117 VRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPV-KICDFDLGSGMKLNNSCTPITT 175
Query: 1213 -------GTLPWMAPELLNGSSSKVS---EKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
G+ +MAPE++ + + + ++ D++S G+VL+ +L+G P+ H GA
Sbjct: 176 PELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVG-HCGADC 234
Query: 1263 G 1263
G
Sbjct: 235 G 235
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase
Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 128/278 (46%), Gaps = 39/278 (14%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
DLE L E+GSGT G V+ ++R T +A+K++++S G E +R+ ++ +++
Sbjct: 26 DLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS---GNKEENKRILMDL----DVVL 78
Query: 1101 KLHH-PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR------KRLII 1153
K H P +V + GT T T+ + L K L +R +R++
Sbjct: 79 KSHDCPYIVQCF--------GTFITNTDVFIAMELMGTCAEK---LKKRMQGPIPERILG 127
Query: 1154 AMDAAF--GMEYLHSKN-IVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGG 1210
M A + YL K+ ++H D+K N+L++ + I K+ DFG+S +
Sbjct: 128 KMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQI----KLCDFGISGRLVDDKAKDR 183
Query: 1211 VRGTLPWMAPELL---NGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVN 1267
G +MAPE + + + + DV+S GI L E+ TG+ PY N + V
Sbjct: 184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVL 243
Query: 1268 NTLRPPVPGFC--DSEWRLLMEQCWAPDPVVRPSFTEI 1303
P +PG +++ ++ C D RP + ++
Sbjct: 244 QEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKL 281
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 56
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 57 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 109 LFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYTHEV 164
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 165 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 199
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 59
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 60 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 111
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYXHEV 167
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 168 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 202
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
Js30
Length = 316
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 91
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 92 SRLDHPFFVKLYFCFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 148
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 149 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANXFV---- 200
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 201 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 239
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 57
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 58 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 109
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYTHEV 165
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 166 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 200
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 33/264 (12%)
Query: 1050 LGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G F Y T A K + KS + ++E+++ E I L +P+V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLL-KPHQKEKMSTEI----AIHKSLDNPHV 104
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF-------G 1160
V F+G +D + V E SL L +R++ + +A + G
Sbjct: 105 VGFHGFFEDD--DFVYVVLEICRRRSLLE--------LHKRRKAVTEPEARYFMRQTIQG 154
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMA 1219
++YLH+ ++H DLK NL +N + K+GDFGL +KI+ + + GT ++A
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDV----KIGDFGLATKIEFDGERKKXLCGTPNYIA 210
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
PE+L S +VD++S G +L+ +L G+ P+ I N VP +
Sbjct: 211 PEVLCKKGH--SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS--VPRHIN 266
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEI 1303
L+ + DP +RPS E+
Sbjct: 267 PVASALIRRMLHADPTLRPSVAEL 290
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 55
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 56 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 107
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYTHEV 163
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 164 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 198
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 33/264 (12%)
Query: 1050 LGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G F Y T A K + KS + ++E+++ E I L +P+V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLL-KPHQKEKMSTEI----AIHKSLDNPHV 104
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF-------G 1160
V F+G +D + V E SL L +R++ + +A + G
Sbjct: 105 VGFHGFFEDD--DFVYVVLEICRRRSLLE--------LHKRRKAVTEPEARYFMRQTIQG 154
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMA 1219
++YLH+ ++H DLK NL +N + K+GDFGL +KI+ + + GT ++A
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDV----KIGDFGLATKIEFDGERKKTLCGTPNYIA 210
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
PE+L S +VD++S G +L+ +L G+ P+ I N VP +
Sbjct: 211 PEVLCKKGH--SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS--VPRHIN 266
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEI 1303
L+ + DP +RPS E+
Sbjct: 267 PVASALIRRMLHADPTLRPSVAEL 290
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 58
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 59 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 110
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYXHEV 166
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 167 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 201
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 84
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 85 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 141
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANAFV---- 193
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 194 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 232
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor Efp
With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor Efq
With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With 3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl Pyrimidine,
Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 56
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 57 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYTHEV 164
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 165 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With Cell
Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The Inhibitor
Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In Complex
With 4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In Complex
With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In Complex
With 4-[(6-amino-4-pyrimidinyl) Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2 (Cdk2)
In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-2-
Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2- Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A Pyrazolo[1,
5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A Pyrazolo[1,
5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar Study,
Crystal Structure In Complex With Cdk2, Selectivity, And
Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl Pyrimidine,
Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea (At9283),
A Multi-Targeted Kinase Inhibitor With Potent Aurora
Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its
Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its
Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole Type
Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole Type
Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole Type
Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of 2-Anilino-4-(Thiazol-5-Yl)
Pyrimidine Transcriptional Cdk Inhibitors As Anticancer
Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of 2-Anilino-4-(Thiazol-5-Yl)
Pyrimidine Transcriptional Cdk Inhibitors As Anticancer
Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 55
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 56 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 107
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYTHEV 163
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 164 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 198
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 63
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 64 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 115
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYTHEV 171
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 172 V--TLWYRAPEILLGXKY-YSTAVDIWSLGCIFAEMVT 206
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 40/186 (21%)
Query: 1093 WREAEILSKLH-HPNVVA----------FYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK 1141
+RE E+L + H NV+ FY V + GG++ L H+ K
Sbjct: 58 FREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI-----------LSHI--HK 104
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SK 1200
RH + + ++ D A +++LH+K I H DLK +N+L + + P+ K+ DFGL S
Sbjct: 105 RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPV-KICDFGLGSG 163
Query: 1201 IKRN---------TLVTGGVRGTLPWMAPELLNGSSSKVS---EKVDVFSFGIVLWEILT 1248
IK N L+T G+ +MAPE++ S + S ++ D++S G++L+ +L+
Sbjct: 164 IKLNGDCSPISTPELLTPC--GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
Query: 1249 GEEPYA 1254
G P+
Sbjct: 222 GYPPFV 227
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT Peptide
From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT Peptide
From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 60
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 61 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 112
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 113 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYXHEV 168
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 169 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 59
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 60 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 111
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYXHEV 167
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 168 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 58
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 59 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 110
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYXHEV 166
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 167 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 201
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 44/229 (19%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLT---LEFWREAEI 1098
ED + ++ LG G G V +A+ R+ + + + +R +E I
Sbjct: 6 EDWDLVQTLGEGAAGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 57
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR----------- 1147
L+H NVV FYG ++G L E+ G L DR
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYL--FLEYCSGGEL----------FDRIEPDIGMPEPD 105
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR---N 1204
+R + A G+ YLH I H D+K +NLL++ +D + K+ DFGL+ + R
Sbjct: 106 AQRFFHQLMA--GVVYLHGIGITHRDIKPENLLLDERDNL----KISDFGLATVFRYNNR 159
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ + GTLP++APELL +E VDV+S GIVL +L GE P+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 56
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 57 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYXHEV 164
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 165 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 199
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 56
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 57 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYTHEV 164
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 165 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 199
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 87
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 88 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 144
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 145 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANXFV---- 196
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 197 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 235
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A Gamma-
Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A Gamma-
Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With A
Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With A
Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN Complex
With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN Complex
With The Inhibitor N-&-N1
Length = 299
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 56
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 57 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYXHEV 164
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 165 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 199
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 89
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 90 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 146
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 147 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANXFV---- 198
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 199 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 237
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 20/227 (8%)
Query: 1033 ISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTL 1090
I LQ+ K ED + +K +G G FG V + + + A+K + K RS +
Sbjct: 67 IRGLQM-KAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSD-----SA 120
Query: 1091 EFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKR 1150
FW E +I++ + P VV + QD L V E+M G L + L+S ++ +
Sbjct: 121 FFWEERDIMAFANSPWVVQLFCAFQDDK--YLYMVMEYMPGGDLVN-LMSNYDVPEKWAK 177
Query: 1151 LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLV-T 1208
A + ++ +HS ++H D+K DN+L++ + K+ DFG K+ +V
Sbjct: 178 FYTA-EVVLALDAIHSMGLIHRDVKPDNMLLDKHGHL----KLADFGTCMKMDETGMVHC 232
Query: 1209 GGVRGTLPWMAPELLN--GSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PE+L G + D +S G+ L+E+L G+ P+
Sbjct: 233 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase
Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 19/222 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
+K +DLE + ELG G +G V + G +A+KRI+ T S EQ+RL ++
Sbjct: 4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRA---TVNSQEQKRLLMDL---- 56
Query: 1097 EI-LSKLHHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIA 1154
+I + + P V FYG + ++G + + ++ + V + K + + IA
Sbjct: 57 DISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQV-IDKGQTIPEDILGKIA 115
Query: 1155 MDAAFGMEYLHSK-NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ +E+LHSK +++H D+K N+L+N + K+ DFG+S + + G
Sbjct: 116 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQV----KMCDFGISGYLVDDVAKDIDAG 171
Query: 1214 TLPWMAPELLNGSSSK--VSEKVDVFSFGIVLWEILTGEEPY 1253
P+MAPE +N ++ S K D++S GI + E+ PY
Sbjct: 172 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY 213
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 57
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 58 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 109
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYXHEV 165
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 166 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 56
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 57 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYXHEV 164
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 165 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 199
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The
Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The
Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 56
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 57 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYXHEV 164
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 165 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 199
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 86
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 87 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 143
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANXFV---- 195
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 196 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 234
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS
Length = 296
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 55
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 56 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 107
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYXHEV 163
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 164 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 198
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of 6-cyclohexylmethoxy-8-isopropyl-9h-
Purin-2-ylamine And Monomeric Cdk2
Length = 299
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 56
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 57 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYTHEV 164
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 165 V--TLWYRAPEILLGXKY-YSTAVDIWSLGCIFAEMVT 199
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ucn-01
Length = 310
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 84
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 85 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 141
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANXFV---- 193
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 194 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 232
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 86
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 87 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 143
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANXFV---- 195
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 196 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 234
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 57
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 58 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 109
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYXHEV 165
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 166 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap) In
Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site Phosphorylation:
Cdk2 Y15p T160p In Complex With Cyclin A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site Phosphorylation:
Cdk2 Y15p T160p In Complex With Cyclin A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium Ion
Length = 298
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 55
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 56 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 107
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYXHEV 163
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 164 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 198
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 84
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 85 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 141
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANXFV---- 193
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 194 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 232
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 86
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 87 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 143
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANXFV---- 195
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 196 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 234
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
562
Length = 301
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 33/264 (12%)
Query: 1050 LGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G F Y T A K + KS + ++E+++ E I L +P+V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLL-KPHQKEKMSTEI----AIHKSLDNPHV 88
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF-------G 1160
V F+G +D + V E SL L +R++ + +A + G
Sbjct: 89 VGFHGFFEDD--DFVYVVLEICRRRSLLE--------LHKRRKAVTEPEARYFMRQTIQG 138
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMA 1219
++YLH+ ++H DLK NL +N + K+GDFGL +KI+ + + GT ++A
Sbjct: 139 VQYLHNNRVIHRDLKLGNLFLNDDMDV----KIGDFGLATKIEFDGERKKDLCGTPNYIA 194
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCD 1279
PE+L S +VD++S G +L+ +L G+ P+ I N VP +
Sbjct: 195 PEVLCKKGH--SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS--VPRHIN 250
Query: 1280 SEWRLLMEQCWAPDPVVRPSFTEI 1303
L+ + DP +RPS E+
Sbjct: 251 PVASALIRRMLHADPTLRPSVAEL 274
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 15/235 (6%)
Query: 1024 VDLALGNFDISTLQIIKNEDLEELKELGSGTFGTVYH--GKWRGTDVAIKRIKKSCFTGR 1081
VDL N +++ N + KELG G F V K G + A K +KK R
Sbjct: 11 VDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKR----R 66
Query: 1082 SSEQERLTLEFWREAEILSKLHH-PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLS 1140
+ R E E +L P V+ + V ++ + + E+ G + + L
Sbjct: 67 RGQDCRA--EILHEIAVLELAKSCPRVINLHEVYENT--SEIILILEYAAGGEIFSLCLP 122
Query: 1141 KERHLDRRKRLIIAMDAAF-GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS 1199
+ + +I + G+ YLH NIVH DLK N+L++ P+ I K+ DFG+S
Sbjct: 123 ELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDI-KIVDFGMS 181
Query: 1200 KIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYA 1254
+ + + GT ++APE+LN ++ D+++ GI+ + +LT P+
Sbjct: 182 RKIGHACELREIMGTPEYLAPEILN--YDPITTATDMWNIGIIAYMLLTHTSPFV 234
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 128/278 (46%), Gaps = 23/278 (8%)
Query: 1037 QIIKNEDLEELKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWR 1094
+++K +L E +G+G F V G VAIK + K+ S+ R+
Sbjct: 7 ELLKYYELHE--TIGTGGFAKVKLACHILTGEMVAIKIMDKNTL---GSDLPRIK----T 57
Query: 1095 EAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIA 1154
E E L L H ++ Y V++ + V E+ G L ++S++R + R++
Sbjct: 58 EIEALKNLRHQHICQLYHVLE--TANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR 115
Query: 1155 MDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNT-LVTGGVR 1212
+ + Y+HS+ H DLK +NLL + ++ I DFGL +K K N
Sbjct: 116 QIVS-AVAYVHSQGYAHRDLKPENLLFDEYHKLKLI----DFGLCAKPKGNKDYHLQTCC 170
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRP 1272
G+L + APEL+ G S SE DV+S GI+L+ ++ G P+ + + A+ I+ +
Sbjct: 171 GSLAYAAPELIQGKSYLGSE-ADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG--KY 227
Query: 1273 PVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
VP + LL++Q DP R S + +M
Sbjct: 228 DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIM 265
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 48/287 (16%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
D EE+ LG G FG V + D IKK R +E++ T+ E +L+ L
Sbjct: 7 DFEEIAVLGQGAFGQVVKAR-NALDSRYYAIKKI----RHTEEKLSTI--LSEVMLLASL 59
Query: 1103 HHPNVVAFYG-----------VVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRL 1151
+H VV +Y + TL E+ NG+L ++ S+ + R +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 1152 IIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTL----- 1206
+ + Y+HS+ I+H DLK N+ + D R + K+GDFGL+K +L
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNV-KIGDFGLAKNVHRSLDILKL 175
Query: 1207 -----------VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
+T + GT ++A E+L+G+ +EK+D++S GI+ +E++ P++
Sbjct: 176 DSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGH-YNEKIDMYSLGIIFFEMIY---PFST 230
Query: 1256 -MHYGAIIGGIVNNTLRPPVPGFCDSEWRL---LMEQCWAPDPVVRP 1298
M I+ + + ++ P P F D++ ++ ++ DP RP
Sbjct: 231 GMERVNILKKLRSVSIEFP-PDFDDNKMKVEKKIIRLLIDHDPNKRP 276
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 83
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 84 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 140
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N+ V
Sbjct: 141 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANSFV---- 192
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 193 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 231
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With Atp
Length = 301
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 20/212 (9%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 59
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ + + S +
Sbjct: 60 KELNHPNIVKLLDVIHTE--NKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRGTLP 1216
G+ + HS ++H DLK +NLL+N + I K+ DFGL++ + T V TL
Sbjct: 118 GLAFCHSHRVLHRDLKPENLLINTEGAI----KLADFGLARAFGVPVRTYXHEVV--TLW 171
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
+ APE+L G S VD++S G + E++T
Sbjct: 172 YRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 202
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3
Length = 286
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 63
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 64 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 120
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 121 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANXFV---- 172
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 173 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 211
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-8
Length = 289
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 64
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 65 SRLDHPFFVKLYFTFQDD--EKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 121
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 122 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANXFV---- 173
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 174 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 212
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 20/212 (9%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 57
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ + + S +
Sbjct: 58 KELNHPNIVKLLDVIHTE--NKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRGTLP 1216
G+ + HS ++H DLK +NLL+N + I K+ DFGL++ + T V TL
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAI----KLADFGLARAFGVPVRTYXHEVV--TLW 169
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
+ APE+L G S VD++S G + E++T
Sbjct: 170 YRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 200
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 1045 EELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
E+L LG G F TVY + + T+ VAIK+IK RS ++ + RE ++L +L
Sbjct: 13 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIK---LGHRSEAKDGINRTALREIKLLQEL 69
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HPN++ G ++ V +FM L ++ L + G+E
Sbjct: 70 SHPNIIGLLDAF--GHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLE 126
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-------IKRNTLVTGGVRGTL 1215
YLH I+H DLK +NLL++ + K+ DFGL+K + +VT R
Sbjct: 127 YLHQHWILHRDLKPNNLLLDENG----VLKLADFGLAKSFGSPNRAYXHQVVTRWYR--- 179
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEIL 1247
APELL G+ VD+++ G +L E+L
Sbjct: 180 ---APELLFGARM-YGVGVDMWAVGCILAELL 207
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein
Kinase And Immunoglobulin Domains
Length = 491
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 20/226 (8%)
Query: 1032 DISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
+I ++ + D+ E ELG+G FG V+ R T+ A + F E ++ T+
Sbjct: 43 EIKHDHVLDHYDIHE--ELGTGAFGVVH----RVTERATGNNFAAKFVMTPHESDKETVR 96
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRL 1151
+E + +S L HP +V + +D + + EFM G L + + + + +
Sbjct: 97 --KEIQTMSVLRHPTLVNLHDAFEDD--NEMVMIYEFMSGGELFEKVADEHNKMSEDEAV 152
Query: 1152 IIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVT 1208
G+ ++H N VH DLK +N++ K K+ DFGL+ K++ VT
Sbjct: 153 EYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNE--LKLIDFGLTAHLDPKQSVKVT 210
Query: 1209 GGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYA 1254
GT + APE+ G V D++S G++ + +L+G P+
Sbjct: 211 T---GTAEFAAPEVAEGKP--VGYYTDMWSVGVLSYILLSGLSPFG 251
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 56
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH---LDRRKRLIIAMD 1156
+L+HPN+V V+ L V EF+ + L+ + + L K + +
Sbjct: 57 KELNHPNIVKLLDVIHTE--NKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLL 113
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRG 1213
G+ + HS ++H DLK +NLL+N + I K+ DFGL++ + T V
Sbjct: 114 Q--GLAFCHSHRVLHRDLKPENLLINTEGAI----KLADFGLARAFGVPVRTYXHEVV-- 165
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
TL + APE+L G S VD++S G + E++T
Sbjct: 166 TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 199
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 62
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 63 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 119
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 120 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANXFV---- 171
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 172 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 210
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 24/222 (10%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTG----RSSEQERLTLEF 1092
+K D L LG G+FG V +GT+ AIK +KK + E+ L
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 75
Query: 1093 WREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI 1152
+ L++LH F V L V E++ G L + + + + +
Sbjct: 76 LDKPPFLTQLHS----CFQTV------DRLYFVMEYVNGGDLMY-HIQQVGKFKEPQAVF 124
Query: 1153 IAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-IKRNTLVTGGV 1211
A + + G+ +LH + I++ DLK DN++++ + I K+ DFG+ K + + T
Sbjct: 125 YAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHI----KIADFGMCKEHMMDGVTTREF 180
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT ++APE++ + + VD +++G++L+E+L G+ P+
Sbjct: 181 CGTPDYIAPEII--AYQPYGKSVDWWAYGVLLYEMLAGQPPF 220
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 107/242 (44%), Gaps = 30/242 (12%)
Query: 1045 EELKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
E + E+G G +GTVY + G VA+K ++ + +E L + RE +L +L
Sbjct: 7 EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP------NGEEGLPISTVREVALLRRL 60
Query: 1103 H---HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR------KRLII 1153
HPNVV V T T E V HV +LD+ I
Sbjct: 61 EAFEHPNVVRLMDVC-----ATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK 115
Query: 1154 AMDAAF--GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGV 1211
+ F G+++LH+ IVH DLK +N+LV + K+ DFGL++I + V
Sbjct: 116 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTV----KLADFGLARIYSYQMALAPV 171
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLR 1271
TL + APE+L S+ + VD++S G + E+ + + +G I +
Sbjct: 172 VVTLWYRAPEVLLQSTY--ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL 229
Query: 1272 PP 1273
PP
Sbjct: 230 PP 231
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide Complex
Length = 286
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 61
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 62 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 118
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 119 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANXFV---- 170
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 171 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 209
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 20/221 (9%)
Query: 1037 QIIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
++ + D+ E ELG+G FG V+ R T+ A + F E ++ T+ +E
Sbjct: 154 HVLDHYDIHE--ELGTGAFGVVH----RVTERATGNNFAAKFVMTPHESDKETVR--KEI 205
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
+ +S L HP +V + +D + + EFM G L + + + + +
Sbjct: 206 QTMSVLRHPTLVNLHDAFEDD--NEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 263
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRG 1213
G+ ++H N VH DLK +N++ K K+ DFGL+ K++ VT G
Sbjct: 264 VCKGLCHMHENNYVHLDLKPENIMFTTKRSNE--LKLIDFGLTAHLDPKQSVKVT---TG 318
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYA 1254
T + APE+ G V D++S G++ + +L+G P+
Sbjct: 319 TAEFAAPEVAEGKP--VGYYTDMWSVGVLSYILLSGLSPFG 357
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 36/220 (16%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 59
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKR----LIIAM 1155
+L+HPN+V V+ TE + HV ++ +D L +
Sbjct: 60 KELNHPNIVKLLDVIH----------TENKLYLVFEHVDQDLKKFMDASALTGIPLPLIK 109
Query: 1156 DAAF----GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVT 1208
F G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 110 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYXH 165
Query: 1209 GGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 166 EVV--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 202
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 83
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 84 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 140
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 141 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANXFV---- 192
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 193 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 231
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 24/223 (10%)
Query: 1039 IKNEDLEELKE-LGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWRE 1095
I+ D E+KE +G G++ + T++ A+K I KS +R E E
Sbjct: 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS---------KRDPTE---E 65
Query: 1096 AEILSKL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIA 1154
EIL + HPN++ V DG + VTE M G L +L +++ R+ +
Sbjct: 66 IEILLRYGQHPNIITLKDVYDDGK--YVYVVTELMKGGELLDKIL-RQKFFSEREASAVL 122
Query: 1155 MDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR--NTLVTGGVR 1212
+EYLH++ +VH DLK N+L + ++ DFG +K R N L+
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY 182
Query: 1213 GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
T ++APE+L + D++S G++L+ +LTG P+AN
Sbjct: 183 -TANFVAPEVLERQGYDAA--CDIWSLGVLLYTMLTGYTPFAN 222
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 26/215 (12%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 59
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH---LDRRKRLIIAMD 1156
+L+HPN+V V+ L V EF+ + L+ + + L K + +
Sbjct: 60 KELNHPNIVKLLDVIHTE--NKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLL 116
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRG 1213
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T V
Sbjct: 117 Q--GLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYXHEVV-- 168
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
TL + APE+L G S VD++S G + E++T
Sbjct: 169 TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 202
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 135/305 (44%), Gaps = 33/305 (10%)
Query: 1042 EDLEELKELGSGTFGTV--YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
EDL++L E+G G +G+V K G +A+KRI+ T EQ++L ++ ++
Sbjct: 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRS---TVDEKEQKQLLMDL---DVVM 75
Query: 1100 SKLHHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
P +V FYG + ++G + + ++V + + I +
Sbjct: 76 RSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATV 135
Query: 1159 FGMEYLHSK-NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPW 1217
+ +L I+H D+K N+L++ I K+ DFG+S +++ G P+
Sbjct: 136 KALNHLKENLKIIHRDIKPSNILLDRSGNI----KLCDFGISGQLVDSIAKTRDAGCRPY 191
Query: 1218 MAPELLNGSSSKVSEKV--DVFSFGIVLWEILTGEEPYANM-----HYGAIIGG----IV 1266
MAPE ++ S+S+ V DV+S GI L+E+ TG PY ++ G +
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLS 251
Query: 1267 NNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM---SAACQTKSHGHQV 1323
N+ R P F + + C D RP + E+ + ++ A + + ++
Sbjct: 252 NSEEREFSPSFIN-----FVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKI 306
Query: 1324 QNQVP 1328
+Q+P
Sbjct: 307 LDQMP 311
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F TV + T + AIK ++K R +E RE +++
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 68
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 69 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 125
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 126 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANXFV---- 177
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 178 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 216
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 112/265 (42%), Gaps = 25/265 (9%)
Query: 1047 LKELGSGTFGT--VYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+K++GSG FG + K VA+K I++ + ++E + L H
Sbjct: 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHR---------SLRH 75
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYL 1164
PN+V F V+ LA + E+ G L + + R + R + G+ Y
Sbjct: 76 PNIVRFKEVILTP--THLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS-GVSYC 132
Query: 1165 HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELL- 1223
HS I H DLK +N L++ P P K+ DFG SK GT ++APE+L
Sbjct: 133 HSMQICHRDLKLENTLLD-GSP-APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 190
Query: 1224 -NGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN----MHYGAIIGGIVNNTLRPPVPGFC 1278
K++ DV+S G+ L+ +L G P+ + Y I I++ P
Sbjct: 191 RQEYDGKIA---DVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRI 247
Query: 1279 DSEWRLLMEQCWAPDPVVRPSFTEI 1303
E L+ + + DP R S EI
Sbjct: 248 SPECCHLISRIFVADPATRISIPEI 272
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With Atp
Length = 302
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 26/215 (12%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 59
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH---LDRRKRLIIAMD 1156
+L+HPN+V V+ L V EF+ + L+ + + L K + +
Sbjct: 60 KELNHPNIVKLLDVIHTE--NKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLL 116
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRG 1213
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T V
Sbjct: 117 Q--GLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYXHEVV-- 168
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
TL + APE+L G S VD++S G + E++T
Sbjct: 169 TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 202
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 1047 LKELGSGTFGTVYHGKWR-GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
L+++G GT+G VY + G A+K+I+ E E + RE IL +L H
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIR------LEKEDEGIPSTTIREISILKELKHS 60
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
N+V Y V+ L V E + + L+ +L E L+ + G+ Y H
Sbjct: 61 NIVKLYDVIHTKK--RLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-----IKRNTLVTGGVRGTLPWMAP 1220
+ ++H DLK NLL+N + + K+ DFGL++ +++ T TL + AP
Sbjct: 118 DRRVLHRDLKPQNLLINREGEL----KIADFGLARAFGIPVRKYTHEV----VTLWYRAP 169
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
++L G S K S +D++S G + E++ G
Sbjct: 170 DVLMG-SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand Complex
Length = 288
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 1047 LKELGSGTFGTVYHGKWR-GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
L+++G GT+G VY + G A+K+I+ E E + RE IL +L H
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIR------LEKEDEGIPSTTIREISILKELKHS 60
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
N+V Y V+ L V E + + L+ +L E L+ + G+ Y H
Sbjct: 61 NIVKLYDVIHTKK--RLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-----IKRNT--LVTGGVRGTLPWM 1218
+ ++H DLK NLL+N + + K+ DFGL++ +++ T +V TL +
Sbjct: 118 DRRVLHRDLKPQNLLINREGEL----KIADFGLARAFGIPVRKYTHEIV------TLWYR 167
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
AP++L G S K S +D++S G + E++ G
Sbjct: 168 APDVLMG-SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 26/215 (12%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 58
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH---LDRRKRLIIAMD 1156
+L+HPN+V V+ L V EF+ + L+ + + L K + +
Sbjct: 59 KELNHPNIVKLLDVIHTE--NKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLL 115
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGGVRG 1213
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T V
Sbjct: 116 Q--GLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYXHEVV-- 167
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
TL + APE+L G S VD++S G + E++T
Sbjct: 168 TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 201
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 1047 LKELGSGTFGTVYHGKWR-GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
L+++G GT+G VY + G A+K+I+ E E + RE IL +L H
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIR------LEKEDEGIPSTTIREISILKELKHS 60
Query: 1106 NVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
N+V Y V+ L V E + + L+ +L E L+ + G+ Y H
Sbjct: 61 NIVKLYDVIHTKK--RLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK-----IKRNTLVTGGVRGTLPWMAP 1220
+ ++H DLK NLL+N + + K+ DFGL++ +++ T TL + AP
Sbjct: 118 DRRVLHRDLKPQNLLINREGEL----KIADFGLARAFGIPVRKYTHEV----VTLWYRAP 169
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
++L G S K S +D++S G + E++ G
Sbjct: 170 DVLMG-SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 1042 EDLEELKE-LGSGTFGTVYHGKWR--GTDVAIKRIKKSCFT---GRSSEQERLTLEFWRE 1095
ED+ EL E +G G F V R G A+K + + FT G S+E + RE
Sbjct: 25 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK------RE 78
Query: 1096 AEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--------ERHLDR 1147
A I L HP++V G L V EFM L ++ + E
Sbjct: 79 ASICHMLKHPHIVELLETYSSD--GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 136
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTL 1206
R I+ + Y H NI+H D+K +L+ K+ P+ K+G FG++ ++ + L
Sbjct: 137 YMRQILE-----ALRYCHDNNIIHRDVKPHCVLLASKENSAPV-KLGGFGVAIQLGESGL 190
Query: 1207 VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
V GG GT +MAPE++ + VDV+ G++L+ +L+G P+
Sbjct: 191 VAGGRVGTPHFMAPEVVK--REPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 107/242 (44%), Gaps = 30/242 (12%)
Query: 1045 EELKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
E + E+G G +GTVY + G VA+K ++ + +E L + RE +L +L
Sbjct: 7 EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP------NGEEGLPISTVREVALLRRL 60
Query: 1103 H---HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR------KRLII 1153
HPNVV V T T E V HV +LD+ I
Sbjct: 61 EAFEHPNVVRLMDVC-----ATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK 115
Query: 1154 AMDAAF--GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGV 1211
+ F G+++LH+ IVH DLK +N+LV + K+ DFGL++I + V
Sbjct: 116 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTV----KLADFGLARIYSYQMALDPV 171
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLR 1271
TL + APE+L S+ + VD++S G + E+ + + +G I +
Sbjct: 172 VVTLWYRAPEVLLQSTY--ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL 229
Query: 1272 PP 1273
PP
Sbjct: 230 PP 231
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 36/220 (16%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+K+I+ +E E + RE +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 55
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKR----LIIAM 1155
+L+HPN+V V+ TE + HV + +D L +
Sbjct: 56 KELNHPNIVKLLDVIH----------TENKLYLVFEHVHQDLKTFMDASALTGIPLPLIK 105
Query: 1156 DAAF----GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVT 1208
F G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 106 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYTH 161
Query: 1209 GGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 162 EVV--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 198
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+ +I+ +E E + RE +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIR------LDTETEGVPSTAIREISLL 56
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 57 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYTHEV 164
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 165 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 32/218 (14%)
Query: 1042 EDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E+ ++++++G GT+G VY K G VA+ +I+ +E E + RE +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIR------LDTETEGVPSTAIREISLL 55
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L+HPN+V V+ L V EF+ H L K + + + ++
Sbjct: 56 KELNHPNIVKLLDVIHTE--NKLYLVFEFL------HQDLKKFMDASALTGIPLPLIKSY 107
Query: 1160 ------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
G+ + HS ++H DLK NLL+N + I K+ DFGL++ + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI----KLADFGLARAFGVPVRTYTHEV 163
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
V TL + APE+L G S VD++S G + E++T
Sbjct: 164 V--TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMVT 198
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGT--DVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
ED + K LG G+F T + T + AIK ++K R +E RE +++
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERDVM 84
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
S+L HP V Y QD L + NG L + K D +
Sbjct: 85 SRLDHPFFVKLYFTFQDDE--KLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVS 141
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI--------KRNTLVTGGV 1211
+EYLH K I+H DLK +N+L+N I ++ DFG +K+ + N V
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHI----QITDFGTAKVLSPESKQARANXFV---- 193
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
GT +++PELL S+ S D+++ G ++++++ G P+
Sbjct: 194 -GTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF 232
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 17/256 (6%)
Query: 1050 LGSGTFGTVYHGKWRGT-DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVV 1108
LG G F + T +V +I + ++E++++E I L H +VV
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI----SIHRSLAHQHVV 84
Query: 1109 AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKN 1168
F+G +D + V E SL L + + L + G +YLH
Sbjct: 85 GFHGFFEDN--DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR 141
Query: 1169 IVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMAPELLNGSS 1227
++H DLK NL +N + K+GDFGL +K++ + + GT ++APE+L+
Sbjct: 142 VIHRDLKLGNLFLNEDLEV----KIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG 197
Query: 1228 SKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLME 1287
S +VDV+S G +++ +L G+ P+ I N +P + L++
Sbjct: 198 H--SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINPVAASLIQ 253
Query: 1288 QCWAPDPVVRPSFTEI 1303
+ DP RP+ E+
Sbjct: 254 KMLQTDPTARPTINEL 269
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 1042 EDLEELKE-LGSGTFGTVYHGKWR--GTDVAIKRIKKSCFT---GRSSEQERLTLEFWRE 1095
ED+ EL E +G G F V R G A+K + + FT G S+E + RE
Sbjct: 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK------RE 76
Query: 1096 AEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--------ERHLDR 1147
A I L HP++V G L V EFM L ++ + E
Sbjct: 77 ASICHMLKHPHIVELLETYSSD--GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134
Query: 1148 RKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTL 1206
R I+ + Y H NI+H D+K +L+ K+ P+ K+G FG++ ++ + L
Sbjct: 135 YMRQILE-----ALRYCHDNNIIHRDVKPHCVLLASKENSAPV-KLGGFGVAIQLGESGL 188
Query: 1207 VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
V GG GT +MAPE++ + VDV+ G++L+ +L+G P+
Sbjct: 189 VAGGRVGTPHFMAPEVVK--REPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 1045 EELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
E+L+++G GT+GTV+ K R T VA+KR++ + E + RE +L +L
Sbjct: 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVR------LDDDDEGVPSSALREICLLKEL 58
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
H N+V + V+ TL V EF + L+ S LD G+
Sbjct: 59 KHKNIVRLHDVLHSDKKLTL--VFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPEL 1222
+ HS+N++H DLK NLL+N + K+ DFGL++ + W P
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGEL----KLADFGLARAFGIPVRCYSAEVVTLWYRPPD 171
Query: 1223 LNGSSSKVSEKVDVFSFGIVLWEILTGEEP 1252
+ + S +D++S G + E+ P
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAARP 201
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y-
27632
Length = 350
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K +G+G+FG V K G A+K + K + L E IL
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E+M G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I KV DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYI----KVADFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 107/242 (44%), Gaps = 30/242 (12%)
Query: 1045 EELKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
E + E+G G +GTVY + G VA+K ++ + +E L + RE +L +L
Sbjct: 7 EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP------NGEEGLPISTVREVALLRRL 60
Query: 1103 H---HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR------KRLII 1153
HPNVV V T T E V HV +LD+ I
Sbjct: 61 EAFEHPNVVRLMDVC-----ATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK 115
Query: 1154 AMDAAF--GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGV 1211
+ F G+++LH+ IVH DLK +N+LV + K+ DFGL++I + V
Sbjct: 116 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTV----KLADFGLARIYSYQMALFPV 171
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLR 1271
TL + APE+L S+ + VD++S G + E+ + + +G I +
Sbjct: 172 VVTLWYRAPEVLLQSTY--ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL 229
Query: 1272 PP 1273
PP
Sbjct: 230 PP 231
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 17/256 (6%)
Query: 1050 LGSGTFGTVYHGKWRGT-DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVV 1108
LG G F + T +V +I + ++E++++E I L H +VV
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI----SIHRSLAHQHVV 104
Query: 1109 AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKN 1168
F+G +D + V E SL L + + L + G +YLH
Sbjct: 105 GFHGFFEDN--DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR 161
Query: 1169 IVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMAPELLNGSS 1227
++H DLK NL +N + K+GDFGL +K++ + + GT ++APE+L+
Sbjct: 162 VIHRDLKLGNLFLNEDLEV----KIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG 217
Query: 1228 SKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLME 1287
S +VDV+S G +++ +L G+ P+ I N +P + L++
Sbjct: 218 H--SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINPVAASLIQ 273
Query: 1288 QCWAPDPVVRPSFTEI 1303
+ DP RP+ E+
Sbjct: 274 KMLQTDPTARPTINEL 289
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 17/256 (6%)
Query: 1050 LGSGTFGTVYHGKWRGT-DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVV 1108
LG G F + T +V +I + ++E++++E I L H +VV
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI----SIHRSLAHQHVV 102
Query: 1109 AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKN 1168
F+G +D + V E SL L + + L + G +YLH
Sbjct: 103 GFHGFFEDN--DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR 159
Query: 1169 IVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMAPELLNGSS 1227
++H DLK NL +N + K+GDFGL +K++ + + GT ++APE+L+
Sbjct: 160 VIHRDLKLGNLFLNEDLEV----KIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG 215
Query: 1228 SKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLME 1287
S +VDV+S G +++ +L G+ P+ I N +P + L++
Sbjct: 216 H--SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINPVAASLIQ 271
Query: 1288 QCWAPDPVVRPSFTEI 1303
+ DP RP+ E+
Sbjct: 272 KMLQTDPTARPTINEL 287
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYXQRTL-----REIKILLRFRH 84
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTXDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 197
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 198 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K +G+G+FG V K G A+K + K + L E IL
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E+M G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I KV DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYI----KVADFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 40/186 (21%)
Query: 1093 WREAEILSKLH-HPNVVA----------FYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK 1141
+RE E+L + H NV+ FY V + GG++ L H+ K
Sbjct: 58 FREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI-----------LSHI--HK 104
Query: 1142 ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SK 1200
RH + + ++ D A +++LH+K I H DLK +N+L + + P+ K+ DF L S
Sbjct: 105 RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPV-KICDFDLGSG 163
Query: 1201 IKRN---------TLVTGGVRGTLPWMAPELLNGSSSKVS---EKVDVFSFGIVLWEILT 1248
IK N L+T G+ +MAPE++ S + S ++ D++S G++L+ +L+
Sbjct: 164 IKLNGDCSPISTPELLTPC--GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
Query: 1249 GEEPYA 1254
G P+
Sbjct: 222 GYPPFV 227
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A 2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 17/256 (6%)
Query: 1050 LGSGTFGTVYHGKWRGT-DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVV 1108
LG G F + T +V +I + ++E++++E I L H +VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI----SIHRSLAHQHVV 80
Query: 1109 AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKN 1168
F+G +D + V E SL L + + L + G +YLH
Sbjct: 81 GFHGFFEDN--DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR 137
Query: 1169 IVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMAPELLNGSS 1227
++H DLK NL +N + K+GDFGL +K++ + + GT ++APE+L+
Sbjct: 138 VIHRDLKLGNLFLNEDLEV----KIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG 193
Query: 1228 SKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLME 1287
S +VDV+S G +++ +L G+ P+ I N +P + L++
Sbjct: 194 H--SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINPVAASLIQ 249
Query: 1288 QCWAPDPVVRPSFTEI 1303
+ DP RP+ E+
Sbjct: 250 KMLQTDPTARPTINEL 265
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 17/256 (6%)
Query: 1050 LGSGTFGTVYHGKWRGT-DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVV 1108
LG G F + T +V +I + ++E++++E I L H +VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI----SIHRSLAHQHVV 80
Query: 1109 AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKN 1168
F+G +D + V E SL L + + L + G +YLH
Sbjct: 81 GFHGFFEDN--DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR 137
Query: 1169 IVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMAPELLNGSS 1227
++H DLK NL +N + K+GDFGL +K++ + + GT ++APE+L+
Sbjct: 138 VIHRDLKLGNLFLNEDLEV----KIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG 193
Query: 1228 SKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLME 1287
S +VDV+S G +++ +L G+ P+ I N +P + L++
Sbjct: 194 H--SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINPVAASLIQ 249
Query: 1288 QCWAPDPVVRPSFTEI 1303
+ DP RP+ E+
Sbjct: 250 KMLQTDPTARPTINEL 265
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + G++ + RE +I+ KL H
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKN--------RELQIMRKLDHC 73
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI------IAM 1155
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 128
Query: 1156 DAAF-GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
F + Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 181
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 182 YICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 100/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ G++ + RE +I+ KL H
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKN--------RELQIMRKLDHC 73
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 128
Query: 1162 -------EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 181
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 182 YICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 220
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 108/245 (44%), Gaps = 20/245 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
+ ED E +K +G G FG V K + T+ A+K + K R+ T F E
Sbjct: 87 LHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAE-----TACFREER 141
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
++L + A + QD L V ++ V G L +L E L +
Sbjct: 142 DVLVNGDCQWITALHYAFQDE--NHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGE 199
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN---TLVTGGVRG 1213
++ +H + VH D+K DN+L+++ IR + DFG S +K N T+ + G
Sbjct: 200 MVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIR----LADFG-SCLKMNDDGTVQSSVAVG 254
Query: 1214 TLPWMAPELLNGSS---SKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
T +++PE+L K + D +S G+ ++E+L GE P+ G I+N+
Sbjct: 255 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEE 314
Query: 1271 RPPVP 1275
R P
Sbjct: 315 RFQFP 319
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 84
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTXDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 197
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 198 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 22/218 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAE-- 1097
+D + L+ +G G++ V + + TD A+K +KK ++ E + W + E
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKEL----VNDDEDID---WVQTEKH 72
Query: 1098 -ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
+HP +V + Q L V E+ VNG + ++R L + +
Sbjct: 73 VFEQASNHPFLVGLHSCFQ--TESRLFFVIEY-VNGGDLMFHMQRQRKLPEEHARFYSAE 129
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-RNTLVTGGVRGTL 1215
+ + YLH + I++ DLK DN+L++ + I K+ D+G+ K R T GT
Sbjct: 130 ISLALNYLHERGIIYRDLKLDNVLLDSEGHI----KLTDYGMCKEGLRPGDTTSXFCGTP 185
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
++APE+L G S VD ++ G++++E++ G P+
Sbjct: 186 NYIAPEILRGEDYGFS--VDWWALGVLMFEMMAGRSPF 221
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 104/242 (42%), Gaps = 27/242 (11%)
Query: 1045 EELKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
E + E+G G +GTVY + G VA+K ++ L + RE +L +L
Sbjct: 12 EPVAEIGVGAYGTVYKARDPHSGHFVALKSVR---VPNGGGGGGGLPISTVREVALLRRL 68
Query: 1103 H---HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR------KRLII 1153
HPNVV V T T E V HV +LD+ I
Sbjct: 69 EAFEHPNVVRLMDVC-----ATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK 123
Query: 1154 AMDAAF--GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGV 1211
+ F G+++LH+ IVH DLK +N+LV + K+ DFGL++I + V
Sbjct: 124 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTV----KLADFGLARIYSYQMALTPV 179
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLR 1271
TL + APE+L S+ + VD++S G + E+ + + +G I +
Sbjct: 180 VVTLWYRAPEVLLQSTY--ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL 237
Query: 1272 PP 1273
PP
Sbjct: 238 PP 239
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 115/236 (48%), Gaps = 26/236 (11%)
Query: 1046 ELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
+L+ +GSG +G V G+ G VAIK++ R + E +RE +L +
Sbjct: 29 DLQPVGSGAYGAVCSAVDGR-TGAKVAIKKLY------RPFQSELFAKRAYRELRLLKHM 81
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEF-----MVNGSLRHVLLSKERHLDRRKRLIIAMDA 1157
H NV+ V P TL T+F + L ++ ++ DR + L+ M
Sbjct: 82 RHENVIGLLDVFT--PDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLK 139
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPW 1217
G+ Y+H+ I+H DLK NL VN + K+ DFGL++ + ++ + G V T +
Sbjct: 140 --GLRYIHAAGIIHRDLKPGNLAVNEDCEL----KILDFGLAR-QADSEMXGXV-VTRWY 191
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
APE++ + + ++ VD++S G ++ E++TG+ + + + I+ T PP
Sbjct: 192 RAPEVIL-NWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP 246
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structure Of The Cdk6-P16ink4a Tumor Suppressor Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 1041 NEDLEELKELGSGTFGTVYHG---KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
++ E + E+G G +G V+ K G VA+KR++ TG +E + L RE
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TG----EEGMPLSTIREVA 63
Query: 1098 ILSKLH---HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIA 1154
+L L HPNVV + V T E + HV +LD+ +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVS-----RTDRETKLTLVFEHVDQDLTTYLDKVPEPGVP 118
Query: 1155 M----DAAF----GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTL 1206
D F G+++LHS +VH DLK N+LV I K+ DFGL++I +
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQI----KLADFGLARIYSFQM 174
Query: 1207 VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEIL 1247
V TL + APE+L SS + VD++S G + E+
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSS--YATPVDLWSVGCIFAEMF 213
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
Length = 350
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + G++ + RE +I+ KL H
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKN--------RELQIMRKLDHC 73
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI------IAM 1155
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYR-----VARHYSRAKQTLPVIYVKLYM 128
Query: 1156 DAAF-GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
F + Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 181
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 182 XICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 220
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 20/220 (9%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K ++LK +GSG G V G +VA+K++ + F ++ +
Sbjct: 16 STFTVLKR--YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP-FQNQTHAKRA---- 68
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH--LDRRK 1149
+RE +L ++H N+++ V P TL + + L L + H LD +
Sbjct: 69 -YRELVLLKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIHMELDHER 125
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ G+++LHS I+H DLK N++V + K+ DFGL++ +
Sbjct: 126 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTASTNFMMT 181
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ G K E VD++S G ++ E++ G
Sbjct: 182 PYVVTRYYRAPEVILGMGYK--ENVDIWSVGCIMGELVKG 219
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With
An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex With
An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 25/246 (10%)
Query: 1023 LVDLALGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTG 1080
L L +FD+ T + ++ E ++ +G+G +G V + R G VAIK+I + F
Sbjct: 39 LALLKARSFDV-TFDV--GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNA-FDV 94
Query: 1081 RSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDG-PGGTLATVTEFM-VNGSLRHVL 1138
++ + L RE +IL H N++A +++ P G +V + + S H +
Sbjct: 95 VTNAKRTL-----RELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQI 149
Query: 1139 LSKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL 1198
+ + L G++Y+HS ++H DLK NLLVN + K+GDFG+
Sbjct: 150 IHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCEL----KIGDFGM 205
Query: 1199 SK------IKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEP 1252
++ + +T V T + APEL+ S + ++ +D++S G + E+L +
Sbjct: 206 ARGLCTSPAEHQYFMTEYV-ATRWYRAPELML-SLHEYTQAIDLWSVGCIFGEMLARRQL 263
Query: 1253 YANMHY 1258
+ +Y
Sbjct: 264 FPGKNY 269
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 131/287 (45%), Gaps = 48/287 (16%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
D EE+ LG G FG V + D IKK R +E++ T+ E +L+ L
Sbjct: 7 DFEEIAVLGQGAFGQVVKAR-NALDSRYYAIKKI----RHTEEKLSTI--LSEVMLLASL 59
Query: 1103 HHPNVVAFYG-----------VVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRL 1151
+H VV +Y + TL E+ N +L ++ S+ + R +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 1152 IIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTL----- 1206
+ + Y+HS+ I+H DLK N+ + D R + K+GDFGL+K +L
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNV-KIGDFGLAKNVHRSLDILKL 175
Query: 1207 -----------VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
+T + GT ++A E+L+G+ +EK+D++S GI+ +E++ P++
Sbjct: 176 DSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGH-YNEKIDMYSLGIIFFEMIY---PFST 230
Query: 1256 -MHYGAIIGGIVNNTLRPPVPGFCDSEWRL---LMEQCWAPDPVVRP 1298
M I+ + + ++ P P F D++ ++ ++ DP RP
Sbjct: 231 GMERVNILKKLRSVSIEFP-PDFDDNKMKVEKKIIRLLIDHDPNKRP 276
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed
With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed
With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKVL---------QDKRFK---NRELQIMRKLDHC 101
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI------IAM 1155
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 156
Query: 1156 DAAF-GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
F + Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 157 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 209
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 210 YICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 248
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 22/218 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAE-- 1097
+D + L+ +G G++ V + + TD A+K +KK ++ E + W + E
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKEL----VNDDEDID---WVQTEKH 57
Query: 1098 -ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
+HP +V + Q L V E+ VNG + ++R L + +
Sbjct: 58 VFEQASNHPFLVGLHSCFQ--TESRLFFVIEY-VNGGDLMFHMQRQRKLPEEHARFYSAE 114
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-RNTLVTGGVRGTL 1215
+ + YLH + I++ DLK DN+L++ + I K+ D+G+ K R T GT
Sbjct: 115 ISLALNYLHERGIIYRDLKLDNVLLDSEGHI----KLTDYGMCKEGLRPGDTTSXFCGTP 170
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
++APE+L G S VD ++ G++++E++ G P+
Sbjct: 171 NYIAPEILRGEDYGFS--VDWWALGVLMFEMMAGRSPF 206
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 80
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 138
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 193
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 194 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 22/218 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAE-- 1097
+D + L+ +G G++ V + + TD A+K +KK ++ E + W + E
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKEL----VNDDEDID---WVQTEKH 61
Query: 1098 -ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
+HP +V + Q L V E+ VNG + ++R L + +
Sbjct: 62 VFEQASNHPFLVGLHSCFQ--TESRLFFVIEY-VNGGDLMFHMQRQRKLPEEHARFYSAE 118
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-RNTLVTGGVRGTL 1215
+ + YLH + I++ DLK DN+L++ + I K+ D+G+ K R T GT
Sbjct: 119 ISLALNYLHERGIIYRDLKLDNVLLDSEGHI----KLTDYGMCKEGLRPGDTTSXFCGTP 174
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
++APE+L G S VD ++ G++++E++ G P+
Sbjct: 175 NYIAPEILRGEDYGFS--VDWWALGVLMFEMMAGRSPF 210
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 108/245 (44%), Gaps = 20/245 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
+ ED E +K +G G FG V K + T+ A+K + K R+ T F E
Sbjct: 71 LHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAE-----TACFREER 125
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
++L + A + QD L V ++ V G L +L E L +
Sbjct: 126 DVLVNGDCQWITALHYAFQDE--NHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGE 183
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN---TLVTGGVRG 1213
++ +H + VH D+K DN+L+++ IR + DFG S +K N T+ + G
Sbjct: 184 MVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIR----LADFG-SCLKMNDDGTVQSSVAVG 238
Query: 1214 TLPWMAPELLNGSSS---KVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
T +++PE+L K + D +S G+ ++E+L GE P+ G I+N+
Sbjct: 239 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEE 298
Query: 1271 RPPVP 1275
R P
Sbjct: 299 RFQFP 303
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 17/256 (6%)
Query: 1050 LGSGTFGTVYHGKWRGT-DVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVV 1108
LG G F + T +V +I + ++E++++E I L H +VV
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI----SIHRSLAHQHVV 78
Query: 1109 AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKN 1168
F+G +D + V E SL L + + L + G +YLH
Sbjct: 79 GFHGFFEDN--DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR 135
Query: 1169 IVHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMAPELLNGSS 1227
++H DLK NL +N + K+GDFGL +K++ + + GT ++APE+L+
Sbjct: 136 VIHRDLKLGNLFLNEDLEV----KIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG 191
Query: 1228 SKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLME 1287
S +VDV+S G +++ +L G+ P+ I N +P + L++
Sbjct: 192 H--SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINPVAASLIQ 247
Query: 1288 QCWAPDPVVRPSFTEI 1303
+ DP RP+ E+
Sbjct: 248 KMLQTDPTARPTINEL 263
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 26 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 78
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 79 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 136
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 137 YIHSANVLHRDLKPSNLLLNTTCDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 191
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 192 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 231
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 33 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 85
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 86 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 143
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 144 YIHSANVLHRDLKPSNLLLNTTCDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 198
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 199 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 238
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 34 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 86
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 87 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 144
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 145 YIHSANVLHRDLKPSNLLLNTTCDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 199
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 200 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 239
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 25 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 77
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 78 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 135
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 136 YIHSANVLHRDLKPSNLLLNTTCDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 190
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 191 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 230
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 84
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 197
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 198 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The Inhibited
State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I With
Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I With
Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I With
Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I With
Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVL---------QDKRFK---NRELQIMRKLDHC 107
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI------IAM 1155
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 162
Query: 1156 DAAF-GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
F + Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 163 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 215
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 216 YICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 254
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 28/223 (12%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 48 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 100
Query: 1105 PNVVAFYGVVQDGPG----GTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFG 1160
N++ +++ P + VT M G+ + LL K +HL G
Sbjct: 101 ENIIGINDIIR-APTIEQMKDVYLVTHLM--GADLYKLL-KTQHLSNDHICYFLYQILRG 156
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTL 1215
++Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTXDL----KICDFGLARVADPDHDHTGFLTEYV-ATR 211
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
+ APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 212 WYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 253
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein
Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein
Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 116
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 117 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY-AAQIVL 173
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGATWTLCGTPEYLA 227
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 228 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 279
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEYSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 88
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 89 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY-AAQIVL 145
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 199
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 200 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 251
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 26 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 78
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 79 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 136
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 137 YIHSANVLHRDLKPSNLLLNTTCDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 191
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 192 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 231
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With Nms-869553a
Length = 422
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 99/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKVL---------QDKRFK---NRELQIMRKLDHC 109
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 164
Query: 1162 -------EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 165 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 217
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 218 YICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 256
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 80
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 138
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 193
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 194 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 138/303 (45%), Gaps = 56/303 (18%)
Query: 1037 QIIKNEDLEELKELGSGTFGTV-YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWRE 1095
Q +KN + E K LG G+ GTV + G ++G VA+KR + ++F
Sbjct: 29 QSLKNLVVSE-KILGYGSSGTVVFQGSFQGRPVAVKR---------------MLIDFCDI 72
Query: 1096 AEILSKL-----HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK---ERHLDR 1147
A + KL HPNV+ +Y + L E + N +L+ ++ SK + +L
Sbjct: 73 ALMEIKLLTESDDHPNVIRYY--CSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKL 129
Query: 1148 RKR---LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLV---------------NLKDPIRP 1189
+K + + A G+ +LHS I+H DLK N+LV NL+ I
Sbjct: 130 QKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 189
Query: 1190 --ICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSS-KVSEKVDVFSFGIVLWEI 1246
+CK D G + N G G W APELL S+ +++ +D+FS G V + I
Sbjct: 190 FGLCKKLDSGQXXFRXNLNNPSGTSG---WRAPELLEESTKRRLTRSIDIFSMGCVFYYI 246
Query: 1247 LT-GEEPYANMHY--GAIIGGIVN-NTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTE 1302
L+ G+ P+ + + II GI + + ++ +E L+ Q DP+ RP+ +
Sbjct: 247 LSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK 306
Query: 1303 IAR 1305
+ R
Sbjct: 307 VLR 309
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
Length = 448
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 138/303 (45%), Gaps = 56/303 (18%)
Query: 1037 QIIKNEDLEELKELGSGTFGTV-YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWRE 1095
Q +KN + E K LG G+ GTV + G ++G VA+KR + ++F
Sbjct: 29 QSLKNLVVSE-KILGYGSSGTVVFQGSFQGRPVAVKR---------------MLIDFCDI 72
Query: 1096 AEILSKL-----HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK---ERHLDR 1147
A + KL HPNV+ +Y + L E + N +L+ ++ SK + +L
Sbjct: 73 ALMEIKLLTESDDHPNVIRYY--CSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKL 129
Query: 1148 RKR---LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLV---------------NLKDPIRP 1189
+K + + A G+ +LHS I+H DLK N+LV NL+ I
Sbjct: 130 QKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 189
Query: 1190 --ICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSS-KVSEKVDVFSFGIVLWEI 1246
+CK D G + N G G W APELL S+ +++ +D+FS G V + I
Sbjct: 190 FGLCKKLDSGQXXFRXNLNNPSGTSG---WRAPELLEESTKRRLTRSIDIFSMGCVFYYI 246
Query: 1247 LT-GEEPYANMHY--GAIIGGIVN-NTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTE 1302
L+ G+ P+ + + II GI + + ++ +E L+ Q DP+ RP+ +
Sbjct: 247 LSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK 306
Query: 1303 IAR 1305
+ R
Sbjct: 307 VLR 309
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein
Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 116
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 117 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY-AAQIVL 173
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 227
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 228 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 279
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of
Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEYSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase
Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase
Catalytic Subunit
Length = 350
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLXGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEYSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 84
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRGTLPWM 1218
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T T +
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDL----KICDFGLARVADPDHDHTGFLXEXVATRWYR 198
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 199 APEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 33 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 85
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 86 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 143
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI----KRNTLVTGGVRGTLPWM 1218
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T T +
Sbjct: 144 YIHSANVLHRDLKPSNLLLNTTCDL----KICDFGLARVADPDHDHTGFLXEXVATRWYR 199
Query: 1219 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 200 APEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 238
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen Synthase
Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen Synthase
Kinase-3 Inhibitors
Length = 424
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 99/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKVL---------QDKRFK---NRELQIMRKLDHC 111
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 166
Query: 1162 -------EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 167 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 219
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 220 YICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 258
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 22/218 (10%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAE-- 1097
+D + L+ +G G++ V + + TD A++ +KK ++ E + W + E
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKEL----VNDDEDID---WVQTEKH 104
Query: 1098 -ILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMD 1156
+HP +V + Q L V E+ VNG + ++R L + +
Sbjct: 105 VFEQASNHPFLVGLHSCFQ--TESRLFFVIEY-VNGGDLMFHMQRQRKLPEEHARFYSAE 161
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-RNTLVTGGVRGTL 1215
+ + YLH + I++ DLK DN+L++ + I K+ D+G+ K R T GT
Sbjct: 162 ISLALNYLHERGIIYRDLKLDNVLLDSEGHI----KLTDYGMCKEGLRPGDTTSTFCGTP 217
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
++APE+L G S VD ++ G++++E++ G P+
Sbjct: 218 NYIAPEILRGEDYGFS--VDWWALGVLMFEMMAGRSPF 253
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With A
Peptide Inhibitor And Detergent
Length = 350
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVL---------QDKRFK---NRELQIMRKLDHC 107
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI------IAM 1155
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 162
Query: 1156 DAAF-GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
F + Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 163 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 215
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 216 XICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 254
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLAGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 80
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 138
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXDL----KIXDFGLARVADPDHDHTGFLTEYV-ATRWY 193
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 194 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 90
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 91 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY-AAQIVL 147
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 148 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 201
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 202 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 253
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 96
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 97 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 153
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 207
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 208 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 26/233 (11%)
Query: 1050 LGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
+GSG +G+V K G VAIK++ R + E +RE +L + H NV
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL------SRPFQSEIFAKRAYRELLLLKHMQHENV 85
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHL----DRRKRLIIAMDAAFGMEY 1163
+ V P +L +F + L K L ++ + L+ M G++Y
Sbjct: 86 IGLLDVF--TPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLK--GLKY 141
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELL 1223
+HS +VH DLK NL VN + K+ DFGL++ + +TG V T + APE++
Sbjct: 142 IHSAGVVHRDLKPGNLAVNEDCEL----KILDFGLAR-HADAEMTGYV-VTRWYRAPEVI 195
Query: 1224 NGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPG 1276
S ++ VD++S G ++ E+LTG+ + Y + I+ T VPG
Sbjct: 196 L-SWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT---GVPG 244
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 80
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 138
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTCDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 193
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 194 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 99/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKVL---------QDKRFK---NRELQIMRKLDHC 152
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 207
Query: 1162 -------EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 208 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 260
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 261 YICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 299
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A Small
Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 96
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 97 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 153
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 207
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 208 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 82
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 83 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 140
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTCDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 195
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 196 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated
Protein Kinase Alpha-2 Subunit Mutant (T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 17/256 (6%)
Query: 1050 LGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG GTFG V G + G VA+K + + RS + + + RE + L HP++
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKI--RSLD---VVGKIKREIQNLKLFRHPHI 73
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ Y V+ V E++ G L + R + R + + ++Y H
Sbjct: 74 IKLYQVISTPT--DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS-AVDYCHRH 130
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSS 1227
+VH DLK +N+L++ K+ DFGLS + + G+ + APE+++G
Sbjct: 131 MVVHRDLKPENVLLDAHMN----AKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRL 186
Query: 1228 SKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLME 1287
E VD++S G++L+ +L G P+ + H + I +P + + L+
Sbjct: 187 YAGPE-VDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFY--IPEYLNRSVATLLM 243
Query: 1288 QCWAPDPVVRPSFTEI 1303
DP+ R + +I
Sbjct: 244 HMLQVDPLKRATIKDI 259
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 36 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 88
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 89 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 146
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 147 YIHSANVLHRDLKPSNLLLNTTCDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 201
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 202 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 241
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 80
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 138
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTCDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 193
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 194 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 96
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 97 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 153
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 207
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 208 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 84
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLK 142
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 197
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 198 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 140/302 (46%), Gaps = 50/302 (16%)
Query: 1037 QIIKNEDLEELKELGSGTFGTV-YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWRE 1095
Q +KN + E K LG G+ GTV + G ++G VA+KR+ E + LT E
Sbjct: 11 QSLKNLVVSE-KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLT-----E 64
Query: 1096 AEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK---ERHLDRRKR-- 1150
++ HPNV+ +Y + L E + N +L+ ++ SK + +L +K
Sbjct: 65 SD-----DHPNVIRYY--CSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYN 116
Query: 1151 -LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLV---------------NLKDPIRP--ICK 1192
+ + A G+ +LHS I+H DLK N+LV NL+ I +CK
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 1193 VGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSS-----KVSEKVDVFSFGIVLWEIL 1247
D G S + N G G W APELL S++ +++ +D+FS G V + IL
Sbjct: 177 KLDSGQSSFRTNLNNPSGTSG---WRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 1248 T-GEEPYANMHY--GAIIGGIVN-NTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
+ G+ P+ + + II GI + + ++ +E L+ Q DP+ RP+ ++
Sbjct: 234 SKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
Query: 1304 AR 1305
R
Sbjct: 294 LR 295
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL + H
Sbjct: 48 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLRFRH 100
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 101 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 158
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 159 YIHSANVLHRDLKPSNLLLNTTCDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 213
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 214 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 253
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K +G+G+FG V K G A+K + K + L E IL
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I KV DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYI----KVADFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 22/231 (9%)
Query: 1050 LGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
+GSG +G+V K G VAIK++ R + E +RE +L + H NV
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL------SRPFQSEIFAKRAYRELLLLKHMQHENV 103
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI--IAMDAAFGMEYLH 1165
+ V P +L +F + L K ++ + I + G++Y+H
Sbjct: 104 IGLLDVFT--PASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH 161
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
S +VH DLK NL VN + K+ DFGL++ + +TG V T + APE++
Sbjct: 162 SAGVVHRDLKPGNLAVNEDCEL----KILDFGLAR-HADAEMTGYVV-TRWYRAPEVIL- 214
Query: 1226 SSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPG 1276
S ++ VD++S G ++ E+LTG+ + Y + I+ T VPG
Sbjct: 215 SWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT---GVPG 262
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4-
Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4-
Arylmaleimide Inhibitor
Length = 391
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKVL---------QDKRFK---NRELQIMRKLDHC 78
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI------IAM 1155
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 133
Query: 1156 DAAF-GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
F + Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 134 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 186
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 187 YICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 225
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 25/246 (10%)
Query: 1023 LVDLALGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTG 1080
L L +FD+ T + ++ E ++ +G+G +G V + R G VAIK+I + F
Sbjct: 38 LALLKARSFDV-TFDV--GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNA-FDV 93
Query: 1081 RSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDG-PGGTLATVTEFM-VNGSLRHVL 1138
++ + L RE +IL H N++A +++ P G +V + + S H +
Sbjct: 94 VTNAKRTL-----RELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQI 148
Query: 1139 LSKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGL 1198
+ + L G++Y+HS ++H DLK NLLVN + K+GDFG+
Sbjct: 149 IHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCEL----KIGDFGM 204
Query: 1199 SK------IKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEP 1252
++ + +T V T + APEL+ S + ++ +D++S G + E+L +
Sbjct: 205 ARGLCTSPAEHQYFMTEYV-ATRWYRAPELML-SLHEYTQAIDLWSVGCIFGEMLARRQL 262
Query: 1253 YANMHY 1258
+ +Y
Sbjct: 263 FPGKNY 268
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 116
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 117 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 173
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 227
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 228 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 279
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 1041 NEDLEELKELGSGTFGTVYHG---KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
++ E + E+G G +G V+ K G VA+KR++ TG +E + L RE
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TG----EEGMPLSTIREVA 63
Query: 1098 ILSKLH---HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIA 1154
+L L HPNVV + V T E + HV +LD+ +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVS-----RTDRETKLTLVFEHVDQDLTTYLDKVPEPGVP 118
Query: 1155 M----DAAF----GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTL 1206
D F G+++LHS +VH DLK N+LV I K+ DFGL++I +
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQI----KLADFGLARIYSFQM 174
Query: 1207 VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEIL 1247
V TL + APE+L SS + VD++S G + E+
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSY--ATPVDLWSVGCIFAEMF 213
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-dependent
Protein Kinase Complexed With A Phosphorylated Substrate
Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase Catalytic
Subunit Alpha In Complex With Peptide Inhibitor Pki Alpha
(6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein
Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain)
Length = 276
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 17/256 (6%)
Query: 1050 LGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG GTFG V G + G VA+K + + RS + + + RE + L HP++
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKI--RSLD---VVGKIKREIQNLKLFRHPHI 73
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSK 1167
+ Y V+ V E++ G L + R + R + + ++Y H
Sbjct: 74 IKLYQVISTPT--DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS-AVDYCHRH 130
Query: 1168 NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSS 1227
+VH DLK +N+L++ K+ DFGLS + + G+ + APE+++G
Sbjct: 131 MVVHRDLKPENVLLDAHMN----AKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRL 186
Query: 1228 SKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEWRLLME 1287
E VD++S G++L+ +L G P+ + H + I +P + + L+
Sbjct: 187 YAGPE-VDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFY--IPEYLNRSVATLLM 243
Query: 1288 QCWAPDPVVRPSFTEI 1303
DP+ R + +I
Sbjct: 244 HMLQVDPLKRATIKDI 259
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent
Protein Kinase And Adenosine Further Defines
Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 27
Length = 351
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 96
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E+ G + L R + R A
Sbjct: 97 QAVNFPFLVKLEFSFKDN--SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 153
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NL+++ + I KV DFG + KR T + GT ++A
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYI----KVTDFGFA--KRVKGRTWXLCGTPEYLA 207
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 208 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 88
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 89 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 145
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 199
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 200 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 251
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 96
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 97 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY-AAQIVL 153
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 207
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 208 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H89 Protein Kinase Inhibitor
N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H7 Protein Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H8 Protein Kinase Inhibitor
[n-(2-Methylamino)ethyl]-5- Isoquinolinesulfonamide
Length = 350
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFK---NRELQIMRKLDHC 85
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI------IAM 1155
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 140
Query: 1156 DAAF-GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
F + Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 141 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 193
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 194 XICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 232
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In
Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16 In
Complex With Staurosporine
Length = 317
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 124/291 (42%), Gaps = 29/291 (9%)
Query: 1038 IIKNEDLEELKELGSGTFGTV--YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWRE 1095
II N+ +++LG G F V G G A+KRI C + E+ + RE
Sbjct: 25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRIL--CHEQQDREEAQ------RE 76
Query: 1096 AEILSKLHHPNVVAF--YGVVQDGPGGTLATVTEFMVNGSLRH---VLLSKERHLDRRKR 1150
A++ +HPN++ Y + + G + F G+L + L K L +
Sbjct: 77 ADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQI 136
Query: 1151 LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICK-VGDFGLSKIK----RNT 1205
L + + G+E +H+K H DLK N+L L D +P+ +G + I R
Sbjct: 137 LWLLLGICRGLEAIHAKGYAHRDLKPTNIL--LGDEGQPVLMDLGSMNQACIHVEGSRQA 194
Query: 1206 LVT---GGVRGTLPWMAPELLN-GSSSKVSEKVDVFSFGIVLWEILTGEEPY-ANMHYGA 1260
L R T+ + APEL + S + E+ DV+S G VL+ ++ GE PY G
Sbjct: 195 LTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254
Query: 1261 IIGGIVNNTLR-PPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVM 1310
+ V N L P P + W+LL DP RP + +L +
Sbjct: 255 SVALAVQNQLSIPQSPRHSSALWQLL-NSMMTVDPHQRPHIPLLLSQLEAL 304
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 9/164 (5%)
Query: 1095 EAEILSKL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
E EIL + HPN++ V DG + VTE G L +L +++ R+ +
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGK--YVYVVTELXKGGELLDKIL-RQKFFSEREASAV 121
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKR--NTLVTGGV 1211
+EYLH++ +VH DLK N+L + ++ DFG +K R N L+
Sbjct: 122 LFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 1212 RGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYAN 1255
T ++APE+L + D++S G++L+ LTG P+AN
Sbjct: 182 Y-TANFVAPEVLERQGYDAA--CDIWSLGVLLYTXLTGYTPFAN 222
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFK---NRELQIMRKLDHC 86
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI------IAM 1155
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 141
Query: 1156 DAAF-GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
F + Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 142 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 194
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 195 YICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 233
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 99/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFK---NRELQIMRKLDHC 81
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 136
Query: 1162 -------EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 137 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 189
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 190 XICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 228
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation
At Position 52
Length = 364
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAI++I S F ++ Q L RE +IL + H
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIRKI--SPFEHQTYCQRTL-----REIKILLRFRH 84
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 197
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 198 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E+ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NL+++ + I KV DFGL+ KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYI----KVTDFGLA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A-
443654
Length = 351
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 96
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 97 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY-AAQIVL 153
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 207
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 208 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL H
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLAFRH 82
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 83 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 140
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTSDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 195
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 196 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From The
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From The
Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 1045 EELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
E+L+++G GT+GTV+ K R T VA+KR++ + E + RE +L +L
Sbjct: 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVR------LDDDDEGVPSSALREICLLKEL 58
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
H N+V + V+ TL V EF + L+ S LD G+
Sbjct: 59 KHKNIVRLHDVLHSDKKLTL--VFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPEL 1222
+ HS+N++H DLK NLL+N + K+ +FGL++ + W P
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGEL----KLANFGLARAFGIPVRCYSAEVVTLWYRPPD 171
Query: 1223 LNGSSSKVSEKVDVFSFGIVLWEILTGEEP 1252
+ + S +D++S G + E+ P
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide
Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide
Peptide
Length = 378
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFK---NRELQIMRKLDHC 92
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI------IAM 1155
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 147
Query: 1156 DAAF-GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
F + Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 148 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 200
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 201 XICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 239
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent Kinase
6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 1041 NEDLEELKELGSGTFGTVYHG---KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAE 1097
++ E + E+G G +G V+ K G VA+KR++ TG +E + L RE
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TG----EEGMPLSTIREVA 63
Query: 1098 ILSKLH---HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIA 1154
+L L HPNVV + V T E + HV +LD+ +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVS-----RTDRETKLTLVFEHVDQDLTTYLDKVPEPGVP 118
Query: 1155 M----DAAF----GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTL 1206
D F G+++LHS +VH DLK N+LV I K+ DFGL++I +
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQI----KLADFGLARIYSFQM 174
Query: 1207 VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEIL 1247
V TL + APE+L SS + VD++S G + E+
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSY--ATPVDLWSVGCIFAEMF 213
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFK---NRELQIMRKLDHC 85
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI------IAM 1155
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 140
Query: 1156 DAAF-GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
F + Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 141 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 193
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 194 XICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 232
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 132/310 (42%), Gaps = 38/310 (12%)
Query: 1034 STLQIIKNEDLEELKE----LGSGTFGTVYH--GKWRGTDVAIKRIKKSCFTGRSSEQER 1087
S LQI KN +++ K LG G G V K A+K ++ R E
Sbjct: 56 SGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELH- 114
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGG--TLATVTEFMVNGSLRHVLLSK-ERH 1144
WR ++ P++V V ++ G L V E + G L + + ++
Sbjct: 115 -----WRASQC------PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 163
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IK 1202
R+ I ++YLHS NI H D+K +NLL K P I K+ DFG +K
Sbjct: 164 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP-NAILKLTDFGFAKETTS 222
Query: 1203 RNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
N+L T T ++APE+L K + D++S G++++ +L G P+ + H AI
Sbjct: 223 HNSLTTPCY--TPYYVAPEVLG--PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 278
Query: 1263 GGIVNNTLRPPVPGFCDSEW-------RLLMEQCWAPDPVVRPSFTEIARRLRVM--SAA 1313
G+ +R F + EW ++L+ +P R + TE +M +
Sbjct: 279 PGM-KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 337
Query: 1314 CQTKSHGHQV 1323
QT H +V
Sbjct: 338 PQTPLHTSRV 347
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 132/310 (42%), Gaps = 38/310 (12%)
Query: 1034 STLQIIKNEDLEELKE----LGSGTFGTVYH--GKWRGTDVAIKRIKKSCFTGRSSEQER 1087
S LQI KN +++ K LG G G V K A+K ++ R E
Sbjct: 50 SGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELH- 108
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGG--TLATVTEFMVNGSLRHVLLSK-ERH 1144
WR ++ P++V V ++ G L V E + G L + + ++
Sbjct: 109 -----WRASQC------PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 157
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IK 1202
R+ I ++YLHS NI H D+K +NLL K P I K+ DFG +K
Sbjct: 158 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP-NAILKLTDFGFAKETTS 216
Query: 1203 RNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
N+L T T ++APE+L K + D++S G++++ +L G P+ + H AI
Sbjct: 217 HNSLTTPCY--TPYYVAPEVLG--PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 272
Query: 1263 GGIVNNTLRPPVPGFCDSEW-------RLLMEQCWAPDPVVRPSFTEIARRLRVM--SAA 1313
G+ +R F + EW ++L+ +P R + TE +M +
Sbjct: 273 PGM-KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 331
Query: 1314 CQTKSHGHQV 1323
QT H +V
Sbjct: 332 PQTPLHTSRV 341
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFP 258
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase
A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase
A (Pka)
Length = 350
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E+ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NL+++ + I KV DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYI----KVTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFK---NRELQIMRKLDHC 73
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI------IAM 1155
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 128
Query: 1156 DAAF-GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
F + Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 181
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 182 XICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
And Leucettine L4
Length = 350
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFK---NRELQIMRKLDHC 73
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI------IAM 1155
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 128
Query: 1156 DAAF-GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
F + Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 181
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 182 YICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta
In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta
In Complex With An Inhibitor
Length = 350
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFK---NRELQIMRKLDHC 74
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI------IAM 1155
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 129
Query: 1156 DAAF-GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
F + Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 130 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 182
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 183 XICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 221
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 132/310 (42%), Gaps = 38/310 (12%)
Query: 1034 STLQIIKNEDLEELKE----LGSGTFGTVYH--GKWRGTDVAIKRIKKSCFTGRSSEQER 1087
S LQI KN +++ K LG G G V K A+K ++ R E
Sbjct: 6 SGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELH- 64
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGG--TLATVTEFMVNGSLRHVLLSK-ERH 1144
WR ++ P++V V ++ G L V E + G L + + ++
Sbjct: 65 -----WRASQC------PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 113
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IK 1202
R+ I ++YLHS NI H D+K +NLL K P I K+ DFG +K
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP-NAILKLTDFGFAKETTS 172
Query: 1203 RNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
N+L T T ++APE+L K + D++S G++++ +L G P+ + H AI
Sbjct: 173 HNSLTTPCY--TPYYVAPEVLG--PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 228
Query: 1263 GGIVNNTLRPPVPGFCDSEW-------RLLMEQCWAPDPVVRPSFTEIARRLRVM--SAA 1313
G+ +R F + EW ++L+ +P R + TE +M +
Sbjct: 229 PGM-KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 287
Query: 1314 CQTKSHGHQV 1323
QT H +V
Sbjct: 288 PQTPLHTSRV 297
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NL+++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLIIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--ISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
And Inhibitor 7d
Length = 350
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFK---NRELQIMRKLDHC 73
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI------IAM 1155
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 128
Query: 1156 DAAF-GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
F + Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 181
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 182 XICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 220
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFK---NRELQIMRKLDHC 73
Query: 1106 NVVAF-YGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI------IAMDAA 1158
N+V Y G + + +V + + RH R K+ + + M
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLN--LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 1159 F-GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----GVRG 1213
F + Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVSXIC 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 185 SRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 220
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 1046 ELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLH 1103
+ + LG G FG V+ + + T A K++ K R Q + E +IL+K+H
Sbjct: 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMV-----EKKILAKVH 243
Query: 1104 HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH---LDRRKRLIIAMDAAFG 1160
+V+ + L V M G +R+ + + + + + G
Sbjct: 244 SRFIVSLAYAFETKT--DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLVTGGVRGTLPWMA 1219
+E+LH +NI++ DLK +N+L++ +R + D GL+ ++K T G GT +MA
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVR----ISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
PELL G S VD F+ G+ L+E++ P+
Sbjct: 358 PELLLGEEYDFS--VDYFALGVTLYEMIAARGPF 389
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled Receptor
Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled Receptor
Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 1046 ELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLH 1103
+ + LG G FG V+ + + T A K++ K R Q + E +IL+K+H
Sbjct: 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMV-----EKKILAKVH 243
Query: 1104 HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH---LDRRKRLIIAMDAAFG 1160
+V+ + L V M G +R+ + + + + + G
Sbjct: 244 SRFIVSLAYAFETKT--DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLVTGGVRGTLPWMA 1219
+E+LH +NI++ DLK +N+L++ +R + D GL+ ++K T G GT +MA
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVR----ISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
PELL G S VD F+ G+ L+E++ P+
Sbjct: 358 PELLLGEEYDFS--VDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 1046 ELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLH 1103
+ + LG G FG V+ + + T A K++ K R Q + E +IL+K+H
Sbjct: 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMV-----EKKILAKVH 243
Query: 1104 HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH---LDRRKRLIIAMDAAFG 1160
+V+ + L V M G +R+ + + + + + G
Sbjct: 244 SRFIVSLAYAFETKT--DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLVTGGVRGTLPWMA 1219
+E+LH +NI++ DLK +N+L++ +R + D GL+ ++K T G GT +MA
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVR----ISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
PELL G S VD F+ G+ L+E++ P+
Sbjct: 358 PELLLGEEYDFS--VDYFALGVTLYEMIAARGPF 389
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 1048 KELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHP 1105
K +G+G+FG VY K G VAIK++ + +R RE +I+ KL H
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFK---NRELQIMRKLDHC 77
Query: 1106 NVV----AFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI------IAM 1155
N+V FY + L V +++ R RH R K+ + + M
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-----VARHYSRAKQTLPVIYVKLYM 132
Query: 1156 DAAF-GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG----G 1210
F + Y+HS I H D+K NLL+ DP + K+ DFG +K LV G
Sbjct: 133 YQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAK----QLVRGEPNVS 185
Query: 1211 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G++ S +DV+S G VL E+L G+
Sbjct: 186 XICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ 224
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 1046 ELKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLH 1103
+ + LG G FG V+ + + T A K++ K R Q + E +IL+K+H
Sbjct: 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMV-----EKKILAKVH 243
Query: 1104 HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH---LDRRKRLIIAMDAAFG 1160
+V+ + L V M G +R+ + + + + + G
Sbjct: 244 SRFIVSLAYAFETKT--DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 1161 MEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLVTGGVRGTLPWMA 1219
+E+LH +NI++ DLK +N+L++ +R + D GL+ ++K T G GT +MA
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVR----ISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
PELL G S VD F+ G+ L+E++ P+
Sbjct: 358 PELLLGEEYDFS--VDYFALGVTLYEMIAARGPF 389
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 24/221 (10%)
Query: 1047 LKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
L +G G +G V + VAIK+I S F ++ Q L RE +IL H
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTL-----REIKILLAFRH 82
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVL--LSKERHLDRRKRLIIAMDAAFGME 1162
N++ +++ + V ++V + L L K +HL G++
Sbjct: 83 ENIIGINDIIRAPTIEQMKDV--YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 140
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK-----RNTLVTGGVRGTLPW 1217
Y+HS N++H DLK NLL+N + K+ DFGL+++ +T V T +
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTCDL----KICDFGLARVADPDHDHTGFLTEYV-ATRWY 195
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ S ++ +D++S G +L E+L+ + HY
Sbjct: 196 RAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1012
Length = 351
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 96
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 97 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 153
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 207
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 208 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase
Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain Kinase
Loc340156
Length = 373
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 1050 LGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVA 1109
LG G FG V+ K T +K K T ++E E E ++++L H N++
Sbjct: 97 LGGGRFGQVH--KCEETATGLKLAAKIIKTRGMKDKE----EVKNEISVMNQLDHANLIQ 150
Query: 1110 FYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKNI 1169
Y + + V E++ G L ++ + +L ++ G+ ++H I
Sbjct: 151 LYDAFE--SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYI 208
Query: 1170 VHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSSK 1229
+H DLK +N+L +D + K+ DFGL++ + GT ++APE++N
Sbjct: 209 LHLDLKPENILCVNRDAKQ--IKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDF-- 264
Query: 1230 VSEKVDVFSFGIVLWEILTGEEPY 1253
VS D++S G++ + +L+G P+
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 132/310 (42%), Gaps = 38/310 (12%)
Query: 1034 STLQIIKNEDLEELKE----LGSGTFGTVYH--GKWRGTDVAIKRIKKSCFTGRSSEQER 1087
S LQI KN +++ K LG G G V K A+K ++ R E
Sbjct: 20 SGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELH- 78
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGG--TLATVTEFMVNGSLRHVLLSK-ERH 1144
WR ++ P++V V ++ G L V E + G L + + ++
Sbjct: 79 -----WRASQC------PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 127
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IK 1202
R+ I ++YLHS NI H D+K +NLL K P I K+ DFG +K
Sbjct: 128 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP-NAILKLTDFGFAKETTS 186
Query: 1203 RNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
N+L T T ++APE+L K + D++S G++++ +L G P+ + H AI
Sbjct: 187 HNSLTTPCY--TPYYVAPEVLG--PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 242
Query: 1263 GGIVNNTLRPPVPGFCDSEW-------RLLMEQCWAPDPVVRPSFTEIARRLRVM--SAA 1313
G+ +R F + EW ++L+ +P R + TE +M +
Sbjct: 243 PGM-KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 301
Query: 1314 CQTKSHGHQV 1323
QT H +V
Sbjct: 302 PQTPLHTSRV 311
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase (Pka)
In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 108/240 (45%), Gaps = 44/240 (18%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
D EE+ LG G FG V + D IKK R +E++ T+ E +L+ L
Sbjct: 7 DFEEIAVLGQGAFGQVVKAR-NALDSRYYAIKKI----RHTEEKLSTI--LSEVXLLASL 59
Query: 1103 HHPNVVAFYGVVQD-----------GPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRL 1151
+H VV +Y + TL E+ N +L ++ S+ + R +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 1152 IIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTL----- 1206
+ + Y+HS+ I+H +LK N+ + D R + K+GDFGL+K +L
Sbjct: 120 RLFRQILEALSYIHSQGIIHRNLKPXNIFI---DESRNV-KIGDFGLAKNVHRSLDILKL 175
Query: 1207 -----------VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEIL----TGEE 1251
+T + GT ++A E+L+G+ +EK+D +S GI+ +E + TG E
Sbjct: 176 DSQNLPGSSDNLTSAI-GTAXYVATEVLDGTGH-YNEKIDXYSLGIIFFEXIYPFSTGXE 233
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 132/310 (42%), Gaps = 38/310 (12%)
Query: 1034 STLQIIKNEDLEELKE----LGSGTFGTVYH--GKWRGTDVAIKRIKKSCFTGRSSEQER 1087
S LQI KN +++ K LG G G V K A+K ++ R E
Sbjct: 12 SGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELH- 70
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGG--TLATVTEFMVNGSLRHVLLSK-ERH 1144
WR ++ P++V V ++ G L V E + G L + + ++
Sbjct: 71 -----WRASQC------PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 119
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IK 1202
R+ I ++YLHS NI H D+K +NLL K P I K+ DFG +K
Sbjct: 120 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP-NAILKLTDFGFAKETTS 178
Query: 1203 RNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
N+L T T ++APE+L K + D++S G++++ +L G P+ + H AI
Sbjct: 179 HNSLTTPCY--TPYYVAPEVLG--PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 234
Query: 1263 GGIVNNTLRPPVPGFCDSEW-------RLLMEQCWAPDPVVRPSFTEIARRLRVM--SAA 1313
G+ +R F + EW ++L+ +P R + TE +M +
Sbjct: 235 PGM-KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 293
Query: 1314 CQTKSHGHQV 1323
QT H +V
Sbjct: 294 PQTPLHTSRV 303
>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To (s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To (R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 96
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 97 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 153
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWTLCGTPEYLA 207
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 208 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 82
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 83 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY-AAQIVL 139
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 140 TFEYLHSLDLIYRDLKPENLLIDEQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 193
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 194 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 245
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein
Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein
Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++++ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E+ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NL+++ + I KV DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYI----KVTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 139/302 (46%), Gaps = 50/302 (16%)
Query: 1037 QIIKNEDLEELKELGSGTFGTV-YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWRE 1095
Q +KN + E K LG G+ GTV + G ++G VA+KR+ E + LT E
Sbjct: 11 QSLKNLVVSE-KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLT-----E 64
Query: 1096 AEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK---ERHLDRRKR-- 1150
++ HPNV+ +Y + L E + N +L+ ++ SK + +L +K
Sbjct: 65 SD-----DHPNVIRYY--CSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYN 116
Query: 1151 -LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLV---------------NLKDPIRP--ICK 1192
+ + A G+ +LHS I+H DLK N+LV NL+ I +CK
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 1193 VGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSS-----KVSEKVDVFSFGIVLWEIL 1247
D G + N G G W APELL S++ +++ +D+FS G V + IL
Sbjct: 177 KLDSGQXXFRXNLNNPSGTSG---WRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 1248 T-GEEPYANMHY--GAIIGGIVN-NTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
+ G+ P+ + + II GI + + ++ +E L+ Q DP+ RP+ ++
Sbjct: 234 SKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
Query: 1304 AR 1305
R
Sbjct: 294 LR 295
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
Length = 324
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 132/310 (42%), Gaps = 38/310 (12%)
Query: 1034 STLQIIKNEDLEELKE----LGSGTFGTVYH--GKWRGTDVAIKRIKKSCFTGRSSEQER 1087
S LQI KN +++ K LG G G V K A+K ++ R E
Sbjct: 10 SGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELH- 68
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGG--TLATVTEFMVNGSLRHVLLSK-ERH 1144
WR ++ P++V V ++ G L V E + G L + + ++
Sbjct: 69 -----WRASQC------PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 117
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IK 1202
R+ I ++YLHS NI H D+K +NLL K P I K+ DFG +K
Sbjct: 118 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP-NAILKLTDFGFAKETTS 176
Query: 1203 RNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
N+L T T ++APE+L K + D++S G++++ +L G P+ + H AI
Sbjct: 177 HNSLTTPCY--TPYYVAPEVLG--PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 232
Query: 1263 GGIVNNTLRPPVPGFCDSEW-------RLLMEQCWAPDPVVRPSFTEIARRLRVM--SAA 1313
G+ +R F + EW ++L+ +P R + TE +M +
Sbjct: 233 PGM-KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 291
Query: 1314 CQTKSHGHQV 1323
QT H +V
Sbjct: 292 PQTPLHTSRV 301
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 17/214 (7%)
Query: 1050 LGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G V+ G+ + T AIK F Q RE E+L KL+H N+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ-------MREFEVLKKLNHKNI 69
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLL--SKERHLDRRKRLIIAMDAAFGMEYLH 1165
V + + ++ + EF GSL VL S L + LI+ D GM +L
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
IVH ++K N++ + + + + K+ DFG ++ + + GT ++ P++
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYER 189
Query: 1226 S------SSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ K VD++S G+ + TG P+
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 132/310 (42%), Gaps = 38/310 (12%)
Query: 1034 STLQIIKNEDLEELKE----LGSGTFGTVYH--GKWRGTDVAIKRIKKSCFTGRSSEQER 1087
S LQI KN +++ K LG G G V K A+K ++ R E
Sbjct: 6 SGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELH- 64
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGG--TLATVTEFMVNGSLRHVLLSK-ERH 1144
WR ++ P++V V ++ G L V E + G L + + ++
Sbjct: 65 -----WRASQC------PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 113
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IK 1202
R+ I ++YLHS NI H D+K +NLL K P I K+ DFG +K
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP-NAILKLTDFGFAKETTS 172
Query: 1203 RNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
N+L T T ++APE+L K + D++S G++++ +L G P+ + H AI
Sbjct: 173 HNSLTTPCY--TPYYVAPEVLG--PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 228
Query: 1263 GGIVNNTLRPPVPGFCDSEW-------RLLMEQCWAPDPVVRPSFTEIARRLRVM--SAA 1313
G+ +R F + EW ++L+ +P R + TE +M +
Sbjct: 229 PGM-KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 287
Query: 1314 CQTKSHGHQV 1323
QT H +V
Sbjct: 288 PQTPLHTSRV 297
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 20/220 (9%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 18 STFTVLKR--YQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRP-FQNQTHAKRA---- 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--ERHLDRRK 1149
+RE ++ ++H N++ V P +L + + L LS+ + LD +
Sbjct: 71 -YRELVLMKVVNHKNIIGLLNVFT--PQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ G+++LHS I+H DLK N++V + K+ DFGL++ + +
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATL----KILDFGLARTAGTSFMMT 183
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ G K E VD++S G+++ E++ G
Sbjct: 184 PYVVTRYYRAPEVILGMGYK--ENVDIWSVGVIMGEMIKG 221
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 132/310 (42%), Gaps = 38/310 (12%)
Query: 1034 STLQIIKNEDLEELKE----LGSGTFGTVYH--GKWRGTDVAIKRIKKSCFTGRSSEQER 1087
S LQI KN +++ K LG G G V K A+K ++ R E
Sbjct: 11 SGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELH- 69
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGG--TLATVTEFMVNGSLRHVLLSK-ERH 1144
WR ++ P++V V ++ G L V E + G L + + ++
Sbjct: 70 -----WRASQC------PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 118
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IK 1202
R+ I ++YLHS NI H D+K +NLL K P I K+ DFG +K
Sbjct: 119 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP-NAILKLTDFGFAKETTS 177
Query: 1203 RNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
N+L T T ++APE+L K + D++S G++++ +L G P+ + H AI
Sbjct: 178 HNSLTTPCY--TPYYVAPEVLG--PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 233
Query: 1263 GGIVNNTLRPPVPGFCDSEW-------RLLMEQCWAPDPVVRPSFTEIARRLRVM--SAA 1313
G+ +R F + EW ++L+ +P R + TE +M +
Sbjct: 234 PGM-KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 292
Query: 1314 CQTKSHGHQV 1323
QT H +V
Sbjct: 293 PQTPLHTSRV 302
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N-
Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E+ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NL+++ + I+ V DFGL+ KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIQ----VTDFGLA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 132/310 (42%), Gaps = 38/310 (12%)
Query: 1034 STLQIIKNEDLEELKE----LGSGTFGTVYH--GKWRGTDVAIKRIKKSCFTGRSSEQER 1087
S LQI KN +++ K LG G G V K A+K ++ R E
Sbjct: 4 SGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELH- 62
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGG--TLATVTEFMVNGSLRHVLLSK-ERH 1144
WR ++ P++V V ++ G L V E + G L + + ++
Sbjct: 63 -----WRASQC------PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 111
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IK 1202
R+ I ++YLHS NI H D+K +NLL K P I K+ DFG +K
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP-NAILKLTDFGFAKETTS 170
Query: 1203 RNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
N+L T T ++APE+L K + D++S G++++ +L G P+ + H AI
Sbjct: 171 HNSLTTPCY--TPYYVAPEVLG--PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 226
Query: 1263 GGIVNNTLRPPVPGFCDSEW-------RLLMEQCWAPDPVVRPSFTEIARRLRVM--SAA 1313
G+ +R F + EW ++L+ +P R + TE +M +
Sbjct: 227 PGM-KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 285
Query: 1314 CQTKSHGHQV 1323
QT H +V
Sbjct: 286 PQTPLHTSRV 295
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 31/213 (14%)
Query: 1047 LKELGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHH 1104
+ +LG GT+G VY T+ VAIKRI+ E+E + RE +L +L H
Sbjct: 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIR------LEHEEEGVPGTAIREVSLLKELQH 92
Query: 1105 PNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF--GME 1162
N++ V+ L + E+ N +++ +++ D R+I + G+
Sbjct: 93 RNIIELKSVIHHN--HRLHLIFEYAENDLKKYM----DKNPDVSMRVIKSFLYQLINGVN 146
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIR-PICKVGDFGLSK-----IKRNT--LVTGGVRGT 1214
+ HS+ +H DLK NLL+++ D P+ K+GDFGL++ I++ T ++T R
Sbjct: 147 FCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYR-- 204
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEIL 1247
PE+L G S S VD++S + E+L
Sbjct: 205 ----PPEILLG-SRHYSTSVDIWSIACIWAEML 232
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 22/221 (9%)
Query: 1044 LEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
L+ L+ +GSG +G+V Y + R VA+K++ + +S R T +RE +L
Sbjct: 30 LQGLRPVGSGAYGSVCSAYDARLR-QKVAVKKLSRPF---QSLIHARRT---YRELRLLK 82
Query: 1101 KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLS---KERHLDRRKRLIIAMDA 1157
L H NV+ V P ++ +E + +L L+ K + L +
Sbjct: 83 HLKHENVIGLLDVFT--PATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQL 140
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPW 1217
G++Y+HS I+H DLK N+ VN +R + DFGL++ + + +TG V T +
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVNEDSELR----ILDFGLAR-QADEEMTGYV-ATRWY 194
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ + ++ VD++S G ++ E+L G+ + Y
Sbjct: 195 RAPEIML-NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 234
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 1050 LGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVA 1109
+G G++G V +GT I+R K + +R F +E EI+ L HPN++
Sbjct: 34 IGRGSWGEVKIAVQKGT--RIRRAAKKIPKYFVEDVDR----FKQEIEIMKSLDHPNIIR 87
Query: 1110 FYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKNI 1169
Y +D L V E G L ++ K R I D + Y H N+
Sbjct: 88 LYETFEDNTDIYL--VMELCTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHKLNV 144
Query: 1170 VHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMAPELLNGSSS 1228
H DLK +N L P P+ K+ DFGL ++ K ++ V GT +++P++L G
Sbjct: 145 AHRDLKPENFLFLTDSPDSPL-KLIDFGLAARFKPGKMMRTKV-GTPYYVSPQVLEGL-- 200
Query: 1229 KVSEKVDVFSFGIVLWEILTGEEPYA 1254
+ D +S G++++ +L G P++
Sbjct: 201 -YGPECDEWSAGVMMYVLLCGYPPFS 225
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 1050 LGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVA 1109
+G G++G V +GT I+R K + +R F +E EI+ L HPN++
Sbjct: 17 IGRGSWGEVKIAVQKGT--RIRRAAKKIPKYFVEDVDR----FKQEIEIMKSLDHPNIIR 70
Query: 1110 FYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLHSKNI 1169
Y +D L V E G L ++ K R I D + Y H N+
Sbjct: 71 LYETFEDNTDIYL--VMELCTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHKLNV 127
Query: 1170 VHFDLKCDNLLVNLKDPIRPICKVGDFGL-SKIKRNTLVTGGVRGTLPWMAPELLNGSSS 1228
H DLK +N L P P+ K+ DFGL ++ K ++ V GT +++P++L G
Sbjct: 128 AHRDLKPENFLFLTDSPDSPL-KLIDFGLAARFKPGKMMRTKV-GTPYYVSPQVLEGL-- 183
Query: 1229 KVSEKVDVFSFGIVLWEILTGEEPYA 1254
+ D +S G++++ +L G P++
Sbjct: 184 -YGPECDEWSAGVMMYVLLCGYPPFS 208
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 132/310 (42%), Gaps = 38/310 (12%)
Query: 1034 STLQIIKNEDLEELKE----LGSGTFGTVYH--GKWRGTDVAIKRIKKSCFTGRSSEQER 1087
S LQI KN +++ K LG G G V K A+K ++ R E
Sbjct: 5 SGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELH- 63
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGG--TLATVTEFMVNGSLRHVLLSK-ERH 1144
WR ++ P++V V ++ G L V E + G L + + ++
Sbjct: 64 -----WRASQC------PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 112
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IK 1202
R+ I ++YLHS NI H D+K +NLL K P I K+ DFG +K
Sbjct: 113 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP-NAILKLTDFGFAKETTS 171
Query: 1203 RNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
N+L T T ++APE+L K + D++S G++++ +L G P+ + H AI
Sbjct: 172 HNSLTTPCY--TPYYVAPEVLG--PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 227
Query: 1263 GGIVNNTLRPPVPGFCDSEW-------RLLMEQCWAPDPVVRPSFTEIARRLRVM--SAA 1313
G+ +R F + EW ++L+ +P R + TE +M +
Sbjct: 228 PGM-KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 286
Query: 1314 CQTKSHGHQV 1323
QT H +V
Sbjct: 287 PQTPLHTSRV 296
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt Inhibitors
Length = 336
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 81
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 82 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 138
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I +V DFG + KR T + GT ++A
Sbjct: 139 TFEYLHSLDLIYRDLKPENLLIDQQGYI----QVTDFGFA--KRVKGRTWTLCGTPEYLA 192
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 193 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 244
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 20/220 (9%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTV--YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 18 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRA---- 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--ERHLDRRK 1149
+RE ++ ++H N++ V P +L + + L LS+ + LD +
Sbjct: 71 -YRELVLMKVVNHKNIIGLLNVFT--PQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ G+++LHS I+H DLK N++V + K+ DFGL++ + +
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATL----KILDFGLARTAGTSFMMT 183
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ G K E VD++S G+++ E++ G
Sbjct: 184 PYVVTRYYRAPEVILGMGYK--ENVDIWSVGVIMGEMIKG 221
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT +A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEALA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain
Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain
Phosphorylated On Ser172
Length = 319
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 17/214 (7%)
Query: 1050 LGSGTFGTVYHGKWRGTD--VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G V+ G+ + T AIK F Q RE E+L KL+H N+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ-------MREFEVLKKLNHKNI 69
Query: 1108 VAFYGVVQDGPGGTLATVTEFMVNGSLRHVLL--SKERHLDRRKRLIIAMDAAFGMEYLH 1165
V + + ++ + EF GSL VL S L + LI+ D GM +L
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNG 1225
IVH ++K N++ + + + + K+ DFG ++ + + GT ++ P++
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYER 189
Query: 1226 S------SSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ K VD++S G+ + TG P+
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 41/232 (17%)
Query: 1045 EELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
E +K+LG G +G V+ R G VA+K+I + F + Q +RE IL++L
Sbjct: 12 ELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRT-----FREIMILTEL 65
Query: 1103 H-HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
H N+V V++ + V ++M L V+ + L+ + + +
Sbjct: 66 SGHENIVNLLNVLRADNDRDVYLVFDYM-ETDLHAVI--RANILEPVHKQYVVYQLIKVI 122
Query: 1162 EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK----IKRNT------------ 1205
+YLHS ++H D+K N+L+N + + KV DFGLS+ I+R T
Sbjct: 123 KYLHSGGLLHRDMKPSNILLNAECHV----KVADFGLSRSFVNIRRVTNNIPLSINENTE 178
Query: 1206 -------LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
++T V T + APE+L G S+K ++ +D++S G +L EIL G+
Sbjct: 179 NFDDDQPILTDYV-ATRWYRAPEILLG-STKYTKGIDMWSLGCILGEILCGK 228
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 114/241 (47%), Gaps = 28/241 (11%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V Y K G +A+K++ + + +++ +RE +
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVK-SGLKIAVKKLSRPFQSIIHAKRT------YRELRL 103
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 104 LKHMKHENVIGLLDVFT--PATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 161
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 162 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 213
Query: 1214 TLPWMAPE-LLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRP 1272
T + APE +LN ++ VD++S G ++ E+LTG + + + I+ T P
Sbjct: 214 TRWYRAPEIMLNWMHYNMT--VDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTP 271
Query: 1273 P 1273
P
Sbjct: 272 P 272
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 38/244 (15%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E ++ LG+G+FG V K + G A+K + K + L E I
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIQ 96
Query: 1100 SKLHHPNVVAF----------YGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRK 1149
++ P +V Y V++ PGG + + LR + E H
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFS--------HLRRIGRFSEPHAR--- 145
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
A EYLHS ++++ DLK +NLL++ + I KV DFG + KR T
Sbjct: 146 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYI----KVADFGFA--KRVKGRTW 197
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNT 1269
+ GT ++APE++ S ++ VD ++ G++++E+ G P+ I IV+
Sbjct: 198 XLCGTPEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1270 LRPP 1273
+R P
Sbjct: 256 VRFP 259
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ + +K LG+G+FG V K + G A+K + K + L E IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E++ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NLL++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
P ++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PAII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-Phenyl-C-(4-(
9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (1-(9h-Purin-6-
Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (1-(9h-Purin-6-
Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 96
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P + +D L V E+ G + L R + R A
Sbjct: 97 QAVNFPFLTKLEFSFKDN--SNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFY-AAQIVL 153
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NL+++ + I KV DFG + KR T + GT ++A
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYI----KVTDFGFA--KRVKGRTWXLCGTPEYLA 207
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 208 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 19/222 (8%)
Query: 1039 IKNEDLEELKELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
+K +DLE + ELG G +G V + G A+KRI+ T S EQ+RL +
Sbjct: 31 VKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRA---TVNSQEQKRLLXDL---- 83
Query: 1097 EILSK-LHHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIA 1154
+I + + P V FYG + ++G + + ++ + V + K + + IA
Sbjct: 84 DISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQV-IDKGQTIPEDILGKIA 142
Query: 1155 MDAAFGMEYLHSK-NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ +E+LHSK +++H D+K N+L+N + K DFG+S + + G
Sbjct: 143 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQV----KXCDFGISGYLVDDVAKDIDAG 198
Query: 1214 TLPWMAPELLNGSSSK--VSEKVDVFSFGIVLWEILTGEEPY 1253
P+ APE +N ++ S K D++S GI E+ PY
Sbjct: 199 CKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPY 240
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 95
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P +V +D L V E+ G + L R + R A
Sbjct: 96 QAVNFPFLVKLEFSFKDN--SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 152
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NL+++ + I+ V DFG + KR T + GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIQ----VTDFGFA--KRVKGRTWXLCGTPEYLA 206
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 207 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 28/169 (16%)
Query: 1151 LIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI-----KRNT 1205
L I + A +E+LHSK ++H DLK N+ + D + KVGDFGL + T
Sbjct: 167 LHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD----VVKVGDFGLVTAMDQDEEEQT 222
Query: 1206 LVT--------GGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMH 1257
++T G GT +M+PE ++G++ S KVD+FS G++L+E+L M
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNN--YSHKVDIFSLGLILFELLYSFS--TQME 278
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDSEW---RLLMEQCWAPDPVVRPSFTEI 1303
II + N P ++ ++++ +P P RP T+I
Sbjct: 279 RVRIITDVRNLKF----PLLFTQKYPQEHMMVQDMLSPSPTERPEATDI 323
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 1043 DLEELKELGSGTFGTVYHGKWRGTDV--AIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
D E ++ +G G FG V+ K + D AIKRI+ R +E++ RE + L+
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIR---LPNRELAREKVM----REVKALA 59
Query: 1101 KLHHPNVVAFYGVVQDGP 1118
KL HP +V ++ + P
Sbjct: 60 KLEHPGIVRYFNAWLETP 77
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 22/221 (9%)
Query: 1044 LEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
L+ L+ +GSG +G+V Y + R VA+K++ + +S R T +RE +L
Sbjct: 30 LQGLRPVGSGAYGSVCSAYDARLR-QKVAVKKLSRPF---QSLIHARRT---YRELRLLK 82
Query: 1101 KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLS---KERHLDRRKRLIIAMDA 1157
L H NV+ V P ++ +E + +L L+ K + L +
Sbjct: 83 HLKHENVIGLLDVFT--PATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL 140
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPW 1217
G++Y+HS I+H DLK N+ VN +R + DFGL++ + + +TG V T +
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVNEDSELR----ILDFGLAR-QADEEMTGYV-ATRWY 194
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ + ++ VD++S G ++ E+L G+ + Y
Sbjct: 195 RAPEIML-NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 234
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 78/276 (28%), Positives = 117/276 (42%), Gaps = 30/276 (10%)
Query: 1031 FDISTLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERL 1088
+D S + + + L LG G++G V+ K G A+KR S F G +L
Sbjct: 46 YDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKDRARKL 104
Query: 1089 TLEFWREAEILSKL---HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHL 1145
AE+ S HP V ++G G L TE + SL+ + L
Sbjct: 105 -------AEVGSHEKVGQHPCCVRLEQAWEEG--GILYLQTE-LCGPSLQQHCEAWGASL 154
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
+ D + +LHS+ +VH D+K N+ + R CK+GDFGL ++ T
Sbjct: 155 PEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG----PRGRCKLGDFGL-LVELGT 209
Query: 1206 LVTGGVRGTLP-WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEE-PYANMHYGAIIG 1263
G V+ P +MAPELL GS + DVFS G+ + E+ E P+ + +
Sbjct: 210 AGAGEVQEGDPRYMAPELLQGSYGTAA---DVFSLGLTILEVACNMELPHGGEGWQQLRQ 266
Query: 1264 GIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPS 1299
G L P SE R ++ PDP +R +
Sbjct: 267 GY----LPPEFTAGLSSELRSVLVMMLEPDPKLRAT 298
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5-
Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)
Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-(5-Methyl-
1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With (1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 96
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P + +D L V E+ G + L R + R A
Sbjct: 97 QAVNFPFLTKLEFSFKDN--SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 153
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NL+++ + I KV DFG + KR T + GT ++A
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYI----KVTDFGFA--KRVKGRTWXLCGTPEYLA 207
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 208 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K ++LK +GSG G V G +VA+K++ + F ++ +
Sbjct: 18 STFTVLKR--YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP-FQNQTHAKRA---- 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERH--LDRRK 1149
+RE +L ++H N+++ V P TL + + L L + H LD +
Sbjct: 71 -YRELVLLKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIHMELDHER 127
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ G+++LHS I+H DLK N++V + K+ DFGL++ +
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTACTNFMMT 183
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ G + VD++S G ++ E++ G
Sbjct: 184 PYVVTRYYRAPEVILGMGY--AANVDIWSVGCIMGELVKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 20/220 (9%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 18 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRA---- 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--ERHLDRRK 1149
+RE ++ ++H N++ V P +L + + L LS+ + LD +
Sbjct: 71 -YRELVLMKVVNHKNIIGLLNVFT--PQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ G+++LHS I+H DLK N++V + K+ DFGL++ + +
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATL----KILDFGLARTAGTSFMMT 183
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ G K E VD++S G ++ E++ G
Sbjct: 184 PYVVTRYYRAPEVILGMGYK--ENVDIWSVGCIMGEMIKG 221
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
+ E +K LG+G+FG V K G A+K + K + L E IL
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----EKRIL 96
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
++ P + +D L V E+ G + L R + R A
Sbjct: 97 QAVNFPFLTKLEFSFKDN--SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY-AAQIVL 153
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMA 1219
EYLHS ++++ DLK +NL+++ + I KV DFG + KR T + GT ++A
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYI----KVTDFGFA--KRVKGRTWXLCGTPEYLA 207
Query: 1220 PELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPP 1273
PE++ S ++ VD ++ G++++E+ G P+ I IV+ +R P
Sbjct: 208 PEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With A
Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ S++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL + + + G
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDSEL----KILDFGLCRHTDDEMT--GYVA 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 20/220 (9%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 18 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRA---- 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--ERHLDRRK 1149
+RE ++ ++H N++ V P +L + + L LS+ + LD +
Sbjct: 71 -YRELVLMKVVNHKNIIGLLNVFT--PQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ G+++LHS I+H DLK N++V + K+ DFGL++ + +
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATL----KILDFGLARTAGTSFMMT 183
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ G K E VD++S G ++ E++ G
Sbjct: 184 PYVVTRYYRAPEVILGMGYK--ENVDIWSVGCIMGEMIKG 221
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 17/235 (7%)
Query: 1024 VDLALGNFDISTLQIIK--NEDLEELKELGSGTFGTVYHG--KWRGTDVAIKRIKKSCFT 1079
VDL N + +D + +ELG G F V K + A K I T
Sbjct: 11 VDLGTENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIIN----T 66
Query: 1080 GRSSEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLL 1139
+ S ++ LE REA I L HPN+V + + + G V + + G L ++
Sbjct: 67 KKLSARDHQKLE--REARICRLLKHPNIVRLHDSISEE--GFHYLVFDLVTGGELFEDIV 122
Query: 1140 SKERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS 1199
++E + + I + ++H +IVH DLK +NLL+ K + K+ DFGL+
Sbjct: 123 AREYYSEADASHCIHQILE-SVNHIHQHDIVHRDLKPENLLLASKCKGAAV-KLADFGLA 180
Query: 1200 -KIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+++ G GT +++PE+L + VD+++ G++L+ +L G P+
Sbjct: 181 IEVQGEQQAWFGFAGTPGYLSPEVLR--KDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 48/269 (17%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 18 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRA---- 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTL------ATVTEFMVNGSLRHVLLSKERHL 1145
+RE ++ ++H N+++ V P TL V E M + +L V+ + L
Sbjct: 71 -YRELVLMKXVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELM-DANLXQVI---QMEL 123
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
D + + G+++LHS I+H DLK N++V + K+ DFGL++ +
Sbjct: 124 DHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTL----KILDFGLARTAGTS 179
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGI 1265
+ T + APE++ G K E VD++S G I+G +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYK--ENVDIWSV-------------------GCIMGEM 218
Query: 1266 VNNTLRPPVPGFCDSEWRLLMEQCWAPDP 1294
V + + P + D +W ++EQ P P
Sbjct: 219 VRHKILFPGRDYID-QWNKVIEQLGTPCP 246
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ R + +
Sbjct: 18 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL------SRPFQNQTHAKR 69
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--ERHLDRRK 1149
+RE ++ ++H N++ V P +L + + L LS+ + LD +
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFT--PQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ G+++LHS I+H DLK N++V + K+ DFGL++ + +
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATL----KILDFGLARTAGTSFMMT 183
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ G K E VD++S G ++ E++ G
Sbjct: 184 PYVVTRYYRAPEVILGMGYK--ENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 20/220 (9%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 18 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRA---- 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--ERHLDRRK 1149
+RE ++ ++H N++ V P +L + + L LS+ + LD +
Sbjct: 71 -YRELVLMKCVNHKNIIGLLNVFT--PQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ G+++LHS I+H DLK N++V + K+ DFGL++ + +
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTSFMMT 183
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ G K E VD++S G ++ E++ G
Sbjct: 184 PYVVTRYYRAPEVILGMGYK--ENVDIWSVGCIMGEMIKG 221
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 107/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ ++ ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase
11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 22/221 (9%)
Query: 1044 LEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
L+ L+ +GSG +G+V Y + R VA+K++ + +S R T +RE +L
Sbjct: 22 LQGLRPVGSGAYGSVCSAYDARLR-QKVAVKKLSRPF---QSLIHARRT---YRELRLLK 74
Query: 1101 KLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLS---KERHLDRRKRLIIAMDA 1157
L H NV+ V P ++ +E + +L L+ K + L +
Sbjct: 75 HLKHENVIGLLDVFT--PATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL 132
Query: 1158 AFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPW 1217
G++Y+HS I+H DLK N+ VN +R + DFGL++ + + +TG V T +
Sbjct: 133 LRGLKYIHSAGIIHRDLKPSNVAVNEDCELR----ILDFGLAR-QADEEMTGYV-ATRWY 186
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHY 1258
APE++ + ++ VD++S G ++ E+L G+ + Y
Sbjct: 187 RAPEIML-NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 226
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 131/310 (42%), Gaps = 38/310 (12%)
Query: 1034 STLQIIKNEDLEELKE----LGSGTFGTVYH--GKWRGTDVAIKRIKKSCFTGRSSEQER 1087
S LQI KN +++ K LG G G V K A+K ++ R E
Sbjct: 4 SGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELH- 62
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGG--TLATVTEFMVNGSLRHVLLSK-ERH 1144
WR ++ P++V V ++ G L V E + G L + + ++
Sbjct: 63 -----WRASQC------PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 111
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IK 1202
R+ I ++YLHS NI H D+K +NLL K P I K+ DFG +K
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP-NAILKLTDFGFAKETTS 170
Query: 1203 RNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
N+L T ++APE+L K + D++S G++++ +L G P+ + H AI
Sbjct: 171 HNSLTEPCY--TPYYVAPEVLG--PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 226
Query: 1263 GGIVNNTLRPPVPGFCDSEW-------RLLMEQCWAPDPVVRPSFTEIARRLRVM--SAA 1313
G+ +R F + EW ++L+ +P R + TE +M +
Sbjct: 227 PGM-KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 285
Query: 1314 CQTKSHGHQV 1323
QT H +V
Sbjct: 286 PQTPLHTSRV 295
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 28/222 (12%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ R + +
Sbjct: 56 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKR 107
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTL------ATVTEFMVNGSLRHVLLSKERHL 1145
+RE ++ ++H N+++ V P TL V E M + +L V+ + L
Sbjct: 108 AYRELVLMKCVNHKNIISLLNVFT--PQKTLEEFQDVYLVMELM-DANLCQVI---QMEL 161
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
D + + G+++LHS I+H DLK N++V + K+ DFGL++ +
Sbjct: 162 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTS 217
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEIL 1247
+ T + APE++ G K E VD++S G ++ E++
Sbjct: 218 FMMTPYVVTRYYRAPEVILGMGYK--ENVDIWSVGCIMGEMV 257
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In
With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In
With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 1104 HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEY 1163
HPN+V + V D L V E ++NG + K++H + I + +
Sbjct: 65 HPNIVKLHEVFHDQLHTFL--VME-LLNGGELFERIKKKKHFSETEASYIMRKLVSAVSH 121
Query: 1164 LHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK---RNTLVTGGVRGTLPWMAP 1220
+H +VH DLK +NLL ++ I K+ DFG +++K L T TL + AP
Sbjct: 122 MHDVGVVHRDLKPENLLFTDENDNLEI-KIIDFGFARLKPPDNQPLKTPCF--TLHYAAP 178
Query: 1221 ELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
ELLN + E D++S G++L+ +L+G+ P+
Sbjct: 179 ELLNQNG--YDESCDLWSLGVILYTMLSGQVPF 209
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ K + +++ +RE +
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSKPFQSIIHAKRT------YRELRL 86
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 87 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 144
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 145 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 196
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 197 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 79
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 80 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 137
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 138 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDXEL----KILDFGLARHTDDEMT--GYVA 189
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 190 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 76
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 77 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 134
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 135 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDSEL----KILDFGLARHTDDEMT--GYVA 186
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 187 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 45/221 (20%)
Query: 1048 KELGSGTFGTVYHGKWRGTD-VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPN 1106
K +G+G+FG V+ K +D VAIK++ + +R RE +I+ + HPN
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKV---------LQDKRFK---NRELQIMRIVKHPN 93
Query: 1107 VV---AFYGVVQDGPGGTLATVTEFMVNGSLRHV---LLSKERHLDRRKRLIIAMDAAFG 1160
VV AF+ D E +N L +V + RH + K+ + +
Sbjct: 94 VVDLKAFFYSNGDKKD-------EVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLY 146
Query: 1161 M-------EYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG---- 1209
M Y+HS I H D+K NLL+ DP + K+ DFG +KI L+ G
Sbjct: 147 MYQLLRSLAYIHSIGICHRDIKPQNLLL---DPPSGVLKLIDFGSAKI----LIAGEPNV 199
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ + APEL+ G+++ + +D++S G V+ E++ G+
Sbjct: 200 SXICSRYYRAPELIFGATNYTTN-IDIWSTGCVMAELMQGQ 239
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 48/269 (17%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 18 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRA---- 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTL------ATVTEFMVNGSLRHVLLSKERHL 1145
+RE ++ ++H N+++ V P TL V E M + +L V+ + L
Sbjct: 71 -YRELVLMKXVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELM-DANLXQVI---QMEL 123
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
D + + G+++LHS I+H DLK N++V + K+ DFGL++ +
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTL----KILDFGLARTAGTS 179
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGI 1265
+ T + APE++ G K E VD++S G I+G +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYK--ENVDIWSV-------------------GCIMGEM 218
Query: 1266 VNNTLRPPVPGFCDSEWRLLMEQCWAPDP 1294
V + + P + D +W ++EQ P P
Sbjct: 219 VRHKILFPGRDYID-QWNKVIEQLGTPCP 246
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 48/269 (17%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 18 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRA---- 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTL------ATVTEFMVNGSLRHVLLSKERHL 1145
+RE ++ ++H N+++ V P TL V E M + +L V+ + L
Sbjct: 71 -YRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELM-DANLXQVI---QMEL 123
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
D + + G+++LHS I+H DLK N++V + K+ DFGL++ +
Sbjct: 124 DHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTL----KILDFGLARTAGTS 179
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGI 1265
+ T + APE++ G K E VD++S G I+G +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYK--ENVDIWSV-------------------GCIMGEM 218
Query: 1266 VNNTLRPPVPGFCDSEWRLLMEQCWAPDP 1294
V + + P + D +W ++EQ P P
Sbjct: 219 VRHKILFPGRDYID-QWNKVIEQLGTPCP 246
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 80
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 81 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 138
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 139 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDSEL----KILDFGLARHTDDEMT--GYVA 190
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 191 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 1051 GSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNVVA- 1109
G GTFGTV GK + T +++ IKK R +E L+ ++ L+ LHHPN+V
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVA-IKKVIQDPRFRNRE---LQIMQD---LAVLHHPNIVQL 84
Query: 1110 ---FYGV-VQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRR---------KRLIIAMD 1156
FY + +D L V E++ + R R+ RR K + +
Sbjct: 85 QSYFYTLGERDRRDIYLNVVMEYVPDTLHRCC-----RNYYRRQVAPPPILIKVFLFQLI 139
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLP 1216
+ G +L S N+ H D+K N+LVN D +C DFG +K + +
Sbjct: 140 RSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLC---DFGSAKKLSPSEPNVAYICSRY 196
Query: 1217 WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
+ APEL+ G+ + VD++S G + E++ GE
Sbjct: 197 YRAPELIFGNQHYTT-AVDIWSVGCIFAEMMLGE 229
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 79
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 80 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 137
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 138 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDXEL----KILDFGLARHTDDEMT--GYVA 189
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 190 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ R + +
Sbjct: 20 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL------SRPFQNQTHAKR 71
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--ERHLDRRK 1149
+RE ++ ++H N++ V P +L + + L L + + LD +
Sbjct: 72 AYRELVLMKCVNHKNIIGLLNVFT--PQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 129
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ G+++LHS I+H DLK N++V + K+ DFGL++ + +
Sbjct: 130 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTSFMMV 185
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ G K E VD++S G ++ E++ G
Sbjct: 186 PFVVTRYYRAPEVILGMGYK--ENVDIWSVGCIMGEMIKG 223
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic
Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic
Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution
Length = 336
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 98/235 (41%), Gaps = 47/235 (20%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI--L 1099
++L+ L+ +G G +G VY G VA+K F R + F E I +
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDERPVAVKVFS---FANRQN--------FINEKNIYRV 61
Query: 1100 SKLHHPNVVAFY----GVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAM 1155
+ H N+ F V DG L V E+ NGSL L RL A
Sbjct: 62 PLMEHDNIARFIVGDERVTADGRMEYL-LVMEYYPNGSLXKYLSLHTSDWVSSCRL--AH 118
Query: 1156 DAAFGMEYLHSK---------NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNT 1205
G+ YLH++ I H DL N+LV C + DFGLS ++ N
Sbjct: 119 SVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDG----TCVISDFGLSMRLTGNR 174
Query: 1206 LVTGGVR--------GTLPWMAPELLNGS-----SSKVSEKVDVFSFGIVLWEIL 1247
LV G GT+ +MAPE+L G+ ++VD+++ G++ WEI
Sbjct: 175 LVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp
Length = 423
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 48/269 (17%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ R + +
Sbjct: 56 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL------SRPFQNQTHAKR 107
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTL------ATVTEFMVNGSLRHVLLSKERHL 1145
+RE ++ ++H N+++ V P TL V E M + +L V+ + L
Sbjct: 108 AYRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELM-DANLCQVI---QMEL 161
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
D + + G+++LHS I+H DLK N++V + K+ DFGL++ +
Sbjct: 162 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTS 217
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGI 1265
+ T + APE++ G K E VD++S G I+G +
Sbjct: 218 FMMTPYVVTRYYRAPEVILGMGYK--ENVDIWSV-------------------GCIMGEM 256
Query: 1266 VNNTLRPPVPGFCDSEWRLLMEQCWAPDP 1294
V + + P + D +W ++EQ P P
Sbjct: 257 VRHKILFPGRDYID-QWNKVIEQLGTPCP 284
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 48/269 (17%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 11 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRA---- 63
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTL------ATVTEFMVNGSLRHVLLSKERHL 1145
+RE ++ ++H N+++ V P TL V E M + +L V+ + L
Sbjct: 64 -YRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELM-DANLXQVI---QMEL 116
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
D + + G+++LHS I+H DLK N++V + K+ DFGL++ +
Sbjct: 117 DHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTL----KILDFGLARTAGTS 172
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGI 1265
+ T + APE++ G K E VD++S G I+G +
Sbjct: 173 FMMTPYVVTRYYRAPEVILGMGYK--ENVDIWSV-------------------GCIMGEM 211
Query: 1266 VNNTLRPPVPGFCDSEWRLLMEQCWAPDP 1294
V + + P + D +W ++EQ P P
Sbjct: 212 VRHKILFPGRDYID-QWNKVIEQLGTPCP 239
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEM--AGFVA 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 85
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 86 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 143
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 144 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDXEL----KILDFGLARHTDDEMT--GYVA 195
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 196 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + TG V
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDXEL----KILDFGLARHTDDEM-TGYV-A 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In
Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEM--AGFVA 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 81
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 82 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 139
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 140 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTADEMT--GYVA 191
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 192 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 76
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 77 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 134
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 135 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 186
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 187 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
Length = 400
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 120/288 (41%), Gaps = 36/288 (12%)
Query: 1034 STLQIIKNEDLEELKE----LGSGTFGTVYH--GKWRGTDVAIKRIKKSCFTGRSSEQER 1087
S LQI KN +++ K LG G G V K A+K ++ R E
Sbjct: 50 SGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELH- 108
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGG--TLATVTEFMVNGSLRHVLLSK-ERH 1144
WR ++ P++V V ++ G L V E + G L + + ++
Sbjct: 109 -----WRASQC------PHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQA 157
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK--IK 1202
R+ I ++YLHS NI H D+K +NLL K P I K+ DFG +K
Sbjct: 158 FTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP-NAILKLTDFGFAKETTS 216
Query: 1203 RNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
N+L T T ++APE+L K + D +S G++ + +L G P+ + H AI
Sbjct: 217 HNSLTTPCY--TPYYVAPEVLG--PEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAIS 272
Query: 1263 GGIVNNTLRPPVPGFCDSEW-------RLLMEQCWAPDPVVRPSFTEI 1303
G +R F + EW + L+ +P R + TE
Sbjct: 273 PG-XKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEF 319
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 19 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRA---- 71
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--ERHLDRRK 1149
+RE ++ ++H N++ V P +L + + L L + + LD +
Sbjct: 72 -YRELVLMKCVNHKNIIGLLNVFT--PQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 128
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ G+++LHS I+H DLK N++V + K+ DFGL++ + +
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTSFMMT 184
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ G K E VD++S G ++ E++ G
Sbjct: 185 PYVVTRYYRAPEVILGMGYK--ENVDIWSVGCIMGEMIKG 222
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent Biochemical
And Cell- Based Activity Throughout The Series
Length = 317
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 110/248 (44%), Gaps = 31/248 (12%)
Query: 1077 CFTGRSSEQERLTLEFWREAEILSKLHH------PNVVAFYGVVQDGPGG--TLATVTEF 1128
CF R+ ++ L L + HH P++V V ++ G L + E
Sbjct: 29 CFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMEC 88
Query: 1129 MVNGSLRHVLLSK-ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPI 1187
M G L + + ++ R+ I D +++LHS NI H D+K +NLL K+
Sbjct: 89 MEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEK- 147
Query: 1188 RPICKVGDFGLSK-IKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEI 1246
+ K+ DFG +K +N L T T ++APE+L K + D++S G++++ +
Sbjct: 148 DAVLKLTDFGFAKETTQNALQTPCY--TPYYVAPEVLG--PEKYDKSCDMWSLGVIMYIL 203
Query: 1247 LTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEW-----------RLLMEQCWAPDPV 1295
L G P+ + AI G+ +R GF + EW RLL++ DP
Sbjct: 204 LCGFPPFYSNTGQAISPGM-KRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKT----DPT 258
Query: 1296 VRPSFTEI 1303
R + T+
Sbjct: 259 ERLTITQF 266
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 97
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 98 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 155
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 156 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEM--XGYVA 207
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 208 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 86
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 87 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 144
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 145 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 196
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 197 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 86
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 87 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 144
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 145 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 196
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 197 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor
Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 110/248 (44%), Gaps = 31/248 (12%)
Query: 1077 CFTGRSSEQERLTLEFWREAEILSKLHH------PNVVAFYGVVQDGPGG--TLATVTEF 1128
CF R+ ++ L L + HH P++V V ++ G L + E
Sbjct: 48 CFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMEC 107
Query: 1129 MVNGSLRHVLLSK-ERHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPI 1187
M G L + + ++ R+ I D +++LHS NI H D+K +NLL K+
Sbjct: 108 MEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEK- 166
Query: 1188 RPICKVGDFGLSK-IKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEI 1246
+ K+ DFG +K +N L T T ++APE+L K + D++S G++++ +
Sbjct: 167 DAVLKLTDFGFAKETTQNALQTPCY--TPYYVAPEVLG--PEKYDKSCDMWSLGVIMYIL 222
Query: 1247 LTGEEPYANMHYGAIIGGIVNNTLRPPVPGFCDSEW-----------RLLMEQCWAPDPV 1295
L G P+ + AI G+ +R GF + EW RLL++ DP
Sbjct: 223 LCGFPPFYSNTGQAISPGM-KRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKT----DPT 277
Query: 1296 VRPSFTEI 1303
R + T+
Sbjct: 278 ERLTITQF 285
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 76
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 77 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 134
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 135 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 186
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 187 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 18 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRA---- 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--ERHLDRRK 1149
+RE ++ ++H N++ V P +L + + L L + + LD +
Sbjct: 71 -YRELVLMKCVNHKNIIGLLNVFT--PQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 127
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ G+++LHS I+H DLK N++V + K+ DFGL++ + +
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTSFMMT 183
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ G K E VD++S G ++ E++ G
Sbjct: 184 PYVVTRYYRAPEVILGMGYK--ENVDIWSVGCIMGEMIKG 221
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating
Mutant
Length = 367
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 81
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 82 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 139
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 140 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTADEMT--GYVA 191
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 192 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 81
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 82 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 139
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 140 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTADEMT--GYVA 191
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 192 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 76
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 77 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 134
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 135 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 186
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 187 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The
Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The
Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 18 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRA---- 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--ERHLDRRK 1149
+RE ++ ++H N++ V P +L + + L L + + LD +
Sbjct: 71 -YRELVLMKCVNHKNIIGLLNVFT--PQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 127
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ G+++LHS I+H DLK N++V + K+ DFGL++ + +
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTSFMMT 183
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ G K E VD++S G ++ E++ G
Sbjct: 184 PYVVTRYYRAPEVILGMGYK--ENVDIWSVGCIMGEMIKG 221
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 22/223 (9%)
Query: 1042 EDLEELK--ELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
EDL E + ++G GT+G VY + + E +++ RE +L
Sbjct: 19 EDLFEYEGCKVGRGTYGHVY------KAKRKDGKDDKDYALKQIEGTGISMSACREIALL 72
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLL--------SKERHLDRRKRL 1151
+L HPNV++ V + + ++ L H++ K L R
Sbjct: 73 RELKHPNVISLQKVFLSHADRKVWLLFDY-AEHDLWHIIKFHRASKANKKPVQLPRGMVK 131
Query: 1152 IIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGG- 1210
+ G+ YLH+ ++H DLK N+LV + P R K+ D G +++ + L
Sbjct: 132 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 191
Query: 1211 ---VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
V T + APELL G+ ++ +D+++ G + E+LT E
Sbjct: 192 LDPVVVTFWYRAPELLLGARH-YTKAIDIWAIGCIFAELLTSE 233
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine Based
Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 80
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 81 LKHMKHENVIGLLDVF--TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 138
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 139 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 190
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 191 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr-
3451
Length = 353
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 48/269 (17%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 18 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRA---- 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTL------ATVTEFMVNGSLRHVLLSKERHL 1145
+RE ++ ++H N+++ V P TL V E M + +L V+ + L
Sbjct: 71 -YRELVLMKXVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELM-DANLCQVI---QMEL 123
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
D + + G+++LHS I+H DLK N++V + K+ DFGL++ +
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTL----KILDFGLARTAGTS 179
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGI 1265
+ T + APE++ G K E VD++S G I+G +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYK--ENVDIWSV-------------------GCIMGEM 218
Query: 1266 VNNTLRPPVPGFCDSEWRLLMEQCWAPDP 1294
V + + P + D +W ++EQ P P
Sbjct: 219 VRHKILFPGRDYID-QWNKVIEQLGTPCP 246
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 79
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 80 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 137
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 138 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 189
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 190 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVF--TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2-
Carboxamide Inhibitor
Length = 371
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 85
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 86 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 143
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 144 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 195
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 196 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 73
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 74 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 131
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 132 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 183
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 184 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + TG V
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEM-TGXV-A 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 81
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 82 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 139
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 140 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 191
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 192 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVF--TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide Substituted
Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 93
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 94 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 151
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 152 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 203
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 204 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 15/216 (6%)
Query: 1041 NEDLEELKELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
++ + +ELG G F V G + A K I + R ++ LE REA I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK----LE--REARI 56
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L HPN+V + + + G V + + G L ++++E + + I
Sbjct: 57 CRLLKHPNIVRLHDSISEE--GFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE 114
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLVTGGVRGTLPW 1217
+ + H IVH DLK +NLL+ K + K+ DFGL+ +++ + G GT +
Sbjct: 115 -SVNHCHLNGIVHRDLKPENLLLASKSKGAAV-KLADFGLAIEVQGDQQAWFGFAGTPGY 172
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
++PE+L + VD+++ G++L+ +L G P+
Sbjct: 173 LSPEVLR--KDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydropyrido-
Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 80
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 81 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 138
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 139 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 190
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 191 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRT------YRELRL 80
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 81 LKHMKHENVIGLLDVF--TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 138
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 139 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 190
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 191 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 1050 LGSGTFGTVYHG--KWRGTDVAIKRIKKS-----CFTGRSSEQERLTLEFWREAEILSKL 1102
LGSG FG V+ K + +V +K IKK C+ + ++TLE ILS++
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWI-EDPKLGKVTLEI----AILSRV 86
Query: 1103 HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
H N++ + ++ G V E +G + + LD I +
Sbjct: 87 EHANIIKVLDIFENQ--GFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVG 144
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPEL 1222
YL K+I+H D+K +N+++ I+ I DFG + + GT+ + APE+
Sbjct: 145 YLRLKDIIHRDIKDENIVIAEDFTIKLI----DFGSAAYLERGKLFYTFCGTIEYCAPEV 200
Query: 1223 LNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANM 1256
L G+ + E ++++S G+ L+ ++ E P+ +
Sbjct: 201 LMGNPYRGPE-LEMWSLGVTLYTLVFEENPFCEL 233
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino Quinoline
Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 48/269 (17%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 19 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRA---- 71
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTL------ATVTEFMVNGSLRHVLLSKERHL 1145
+RE ++ ++H N+++ V P TL V E M + +L V+ + L
Sbjct: 72 -YRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELM-DANLCQVI---QMEL 124
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
D + + G+++LHS I+H DLK N++V + K+ DFGL++ +
Sbjct: 125 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTS 180
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGI 1265
+ T + APE++ G K E VD++S G I+G +
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGYK--ENVDIWSV-------------------GCIMGEM 219
Query: 1266 VNNTLRPPVPGFCDSEWRLLMEQCWAPDP 1294
V + + P + D +W ++EQ P P
Sbjct: 220 VRHKILFPGRDYID-QWNKVIEQLGTPCP 247
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 94
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 95 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 152
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 153 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 204
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 205 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVF--TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + TG V
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEM-TGYV-A 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A 1-Aryl-3,4-
Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
Length = 364
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 48/269 (17%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 18 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRA---- 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTL------ATVTEFMVNGSLRHVLLSKERHL 1145
+RE ++ ++H N+++ V P TL V E M + +L V+ + L
Sbjct: 71 -YRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELM-DANLCQVI---QMEL 123
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
D + + G+++LHS I+H DLK N++V + K+ DFGL++ +
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTS 179
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGI 1265
+ T + APE++ G K E VD++S G I+G +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYK--ENVDIWSV-------------------GCIMGEM 218
Query: 1266 VNNTLRPPVPGFCDSEWRLLMEQCWAPDP 1294
V + + P + D +W ++EQ P P
Sbjct: 219 VRHKILFPGRDYID-QWNKVIEQLGTPCP 246
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRT------YRELRL 70
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 71 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 128
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 129 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEM--AGFVA 180
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 181 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment Of
Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment Of
Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 48/269 (17%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 19 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRA---- 71
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTL------ATVTEFMVNGSLRHVLLSKERHL 1145
+RE ++ ++H N+++ V P TL V E M + +L V+ + L
Sbjct: 72 -YRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELM-DANLCQVI---QMEL 124
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
D + + G+++LHS I+H DLK N++V + K+ DFGL++ +
Sbjct: 125 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTS 180
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGI 1265
+ T + APE++ G K E VD++S G I+G +
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGYK--ENVDIWSV-------------------GCIMGEM 219
Query: 1266 VNNTLRPPVPGFCDSEWRLLMEQCWAPDP 1294
V + + P + D +W ++EQ P P
Sbjct: 220 VRHKILFPGRDYID-QWNKVIEQLGTPCP 247
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 97
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 98 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 155
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 156 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 207
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 208 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 25/221 (11%)
Query: 1094 REAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDR--RKRL 1151
+E ++L +L H NV+ V+ + + V E+ V G + LD KR
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM--------QEMLDSVPEKRF 106
Query: 1152 IIAMDAAF------GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
+ + G+EYLHS+ IVH D+K NLL+ + K+ G+++
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTL----KISALGVAEALHPF 162
Query: 1206 LVTGGVR---GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAII 1262
R G+ + PE+ NG + KVD++S G+ L+ I TG P+ + +
Sbjct: 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLF 222
Query: 1263 GGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
I + +PG C L++ +P R S +I
Sbjct: 223 ENIGKGSYA--IPGDCGPPLSDLLKGMLEYEPAKRFSIRQI 261
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking
Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking
Site On Its Activator Mkk3b
Length = 360
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With Cyclin
T
Length = 373
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 1045 EELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
E+L ++G GTFG V+ + R G VA+K++ +E+E + RE +IL L
Sbjct: 21 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME------NEKEGFPITALREIKILQLL 74
Query: 1103 HHPNVVAFYGVVQDGPG------GTLATVTEFM---VNGSLRHVLLSKERHLDRRKRLII 1153
H NVV + + G++ V +F + G L +VL+ + L KR++
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV--KFTLSEIKRVMQ 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
+ G+ Y+H I+H D+K N+L+ +D + K+ DFGL++ + +N+
Sbjct: 133 ML--LNGLYYIHRNKILHRDMKAANVLIT-RD---GVLKLADFGLARAFSLAKNSQPNRY 186
Query: 1211 VRG--TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
TL + PELL G +D++ G ++ E+ T
Sbjct: 187 XNRVVTLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMWT 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 48/269 (17%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 18 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRA---- 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTL------ATVTEFMVNGSLRHVLLSKERHL 1145
+RE ++ ++H N+++ V P TL V E M + +L V+ + L
Sbjct: 71 -YRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELM-DANLCQVI---QMEL 123
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
D + + G+++LHS I+H DLK N++V + K+ DFGL++ +
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTS 179
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGI 1265
+ T + APE++ G K E VD++S G I+G +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYK--ENVDIWSV-------------------GCIMGEM 218
Query: 1266 VNNTLRPPVPGFCDSEWRLLMEQCWAPDP 1294
V + + P + D +W ++EQ P P
Sbjct: 219 VRHKILFPGRDYID-QWNKVIEQLGTPCP 246
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRT------YRELRL 84
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 85 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 142
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 143 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 194
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 195 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 229
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole
Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 48/269 (17%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 17 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRA---- 69
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTL------ATVTEFMVNGSLRHVLLSKERHL 1145
+RE ++ ++H N+++ V P TL V E M + +L V+ + L
Sbjct: 70 -YRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELM-DANLCQVI---QMEL 122
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
D + + G+++LHS I+H DLK N++V + K+ DFGL++ +
Sbjct: 123 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTS 178
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGI 1265
+ T + APE++ G K E VD++S G I+G +
Sbjct: 179 FMMTPYVVTRYYRAPEVILGMGYK--ENVDIWSV-------------------GCIMGEM 217
Query: 1266 VNNTLRPPVPGFCDSEWRLLMEQCWAPDP 1294
V + + P + D +W ++EQ P P
Sbjct: 218 VRHKILFPGRDYID-QWNKVIEQLGTPCP 245
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRT------YRELRL 93
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 94 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 151
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 152 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 203
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 204 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 79
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 80 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 137
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 138 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 189
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 190 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 71
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 72 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 129
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + TG V
Sbjct: 130 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEM-TGYV-A 181
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 182 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking
Partner
Length = 380
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRT------YRELRL 94
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 95 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 152
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 153 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 204
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 205 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 72
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 73 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 130
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 131 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 182
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 183 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 28/222 (12%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 12 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRA---- 64
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTL------ATVTEFMVNGSLRHVLLSKERHL 1145
+RE ++ ++H N+++ V P TL V E M + +L V+ + L
Sbjct: 65 -YRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELM-DANLCQVI---QMEL 117
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
D + + G+++LHS I+H DLK N++V + K+ DFGL++ +
Sbjct: 118 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTS 173
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEIL 1247
+ T + APE++ G K E VD++S G ++ E++
Sbjct: 174 FMMTPYVVTRYYRAPEVILGMGYK--ENVDIWSVGCIMGEMV 213
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 18 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRA---- 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--ERHLDRRK 1149
+RE ++ ++H N++ V P +L + + L L + + LD +
Sbjct: 71 -YRELVLMKCVNHKNIIGLLNVFT--PQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 127
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ G+++LHS I+H DLK N++V + K+ DFGL++ + +
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTSFMMT 183
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ G K E VD++S G ++ E++ G
Sbjct: 184 PEVVTRYYRAPEVILGMGYK--ENVDIWSVGCIMGEMIKG 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 28/222 (12%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 12 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRA---- 64
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTL------ATVTEFMVNGSLRHVLLSKERHL 1145
+RE ++ ++H N+++ V P TL V E M + +L V+ + L
Sbjct: 65 -YRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELM-DANLCQVI---QMEL 117
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
D + + G+++LHS I+H DLK N++V + K+ DFGL++ +
Sbjct: 118 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTS 173
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEIL 1247
+ T + APE++ G K E VD++S G ++ E++
Sbjct: 174 FMMTPYVVTRYYRAPEVILGMGYK--ENVDIWSVGCIMGEMV 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 28/222 (12%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 11 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRA---- 63
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTL------ATVTEFMVNGSLRHVLLSKERHL 1145
+RE ++ ++H N+++ V P TL V E M + +L V+ + L
Sbjct: 64 -YRELVLMKCVNHKNIISLLNVF--TPQKTLEEFQDVYLVMELM-DANLCQVI---QMEL 116
Query: 1146 DRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNT 1205
D + + G+++LHS I+H DLK N++V + K+ DFGL++ +
Sbjct: 117 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTS 172
Query: 1206 LVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEIL 1247
+ T + APE++ G K E VD++S G ++ E++
Sbjct: 173 FMMTPYVVTRYYRAPEVILGMGYK--ENVDIWSVGCIMGEMV 212
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 15/216 (6%)
Query: 1041 NEDLEELKELGSGTFGTVYHGKW--RGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
++ + +ELG G F V G + A K I + R ++ LE REA I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK----LE--REARI 56
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAA 1158
L HPN+V + + + G V + + G L ++++E + + I
Sbjct: 57 CRLLKHPNIVRLHDSISEE--GFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE 114
Query: 1159 FGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLVTGGVRGTLPW 1217
+ + H IVH DLK +NLL+ K + K+ DFGL+ +++ + G GT +
Sbjct: 115 -SVNHCHLNGIVHRDLKPENLLLASKSKGAAV-KLADFGLAIEVQGDQQAWFGFAGTPGY 172
Query: 1218 MAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
++PE+L + VD+++ G++L+ +L G P+
Sbjct: 173 LSPEVLR--KDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
Length = 349
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 71
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 72 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 129
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 130 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 181
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 182 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRT------YRELRL 94
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 95 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 152
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 153 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEM--XGXVA 204
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 205 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 70
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 71 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 128
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 129 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 180
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 181 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 92/226 (40%), Gaps = 46/226 (20%)
Query: 1095 EAEILSKLHHPNVVAFYGVVQDGP-----------GGTLATVTEFM-------------- 1129
E ++ KLHHPN+ Y V +D G L + F+
Sbjct: 78 EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKT 137
Query: 1130 ------------VNGSLRHVLLSKERHLDRRKRLIIAMDAAF-GMEYLHSKNIVHFDLKC 1176
+NGS+ H + R K + M F + YLH++ I H D+K
Sbjct: 138 QICPCPECNEEAINGSI-HGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKP 196
Query: 1177 DNLLVNLKDPIRPICKVGDFGLSK--IKRNTLVTGGVR---GTLPWMAPELLNGSSSKVS 1231
+N L + K+ DFGLSK K N G+ GT ++APE+LN ++
Sbjct: 197 ENFLFSTNKSFE--IKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYG 254
Query: 1232 EKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPGF 1277
K D +S G++L +L G P+ ++ I ++N L P +
Sbjct: 255 PKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNY 300
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRT------YRELRL 70
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 71 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 128
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 129 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 180
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 181 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 14/219 (6%)
Query: 1037 QIIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
Q + + + LG G FG V + R T K + + E + L E
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN---EK 235
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLR-HVLLSKERHLDRRKRLIIAM 1155
+IL K++ VV+ + L V M G L+ H+ + + + A
Sbjct: 236 QILEKVNSRFVVSLAYAYETK--DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLVTGGVRGT 1214
+ G+E LH + IV+ DLK +N+L++ IR + D GL+ + + G V GT
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIR----ISDLGLAVHVPEGQTIKGRV-GT 348
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ +MAPE++ S D ++ G +L+E++ G+ P+
Sbjct: 349 VGYMAPEVVKNERYTFSP--DWWALGCLLYEMIAGQSPF 385
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
Length = 576
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 14/219 (6%)
Query: 1037 QIIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREA 1096
Q + + + LG G FG V + R T K + + E + L E
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN---EK 235
Query: 1097 EILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLR-HVLLSKERHLDRRKRLIIAM 1155
+IL K++ VV+ + L V M G L+ H+ + + + A
Sbjct: 236 QILEKVNSRFVVSLAYAYETK--DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 1156 DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLVTGGVRGT 1214
+ G+E LH + IV+ DLK +N+L++ IR + D GL+ + + G V GT
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIR----ISDLGLAVHVPEGQTIKGRV-GT 348
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+ +MAPE++ S D ++ G +L+E++ G+ P+
Sbjct: 349 VGYMAPEVVKNERYTFSP--DWWALGCLLYEMIAGQSPF 385
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ D+GL++ + + G
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDYGLARHTDDEMT--GYVA 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 1045 EELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
E+L ++G GTFG V+ + R G VA+K++ +E+E + RE +IL L
Sbjct: 21 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKILQLL 74
Query: 1103 HHPNVVAFYGVVQDGPG------GTLATVTEFM---VNGSLRHVLLSKERHLDRRKRLII 1153
H NVV + + G++ V +F + G L +VL+ + L KR++
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV--KFTLSEIKRVMQ 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
+ G+ Y+H I+H D+K N+L+ +D + K+ DFGL++ + +N+
Sbjct: 133 ML--LNGLYYIHRNKILHRDMKAANVLIT-RD---GVLKLADFGLARAFSLAKNSQPNRY 186
Query: 1211 VRG--TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
TL + PELL G +D++ G ++ E+ T
Sbjct: 187 XNRVVTLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 1045 EELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
E+L ++G GTFG V+ + R G VA+K++ +E+E + RE +IL L
Sbjct: 20 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKILQLL 73
Query: 1103 HHPNVVAFYGVVQDGPG------GTLATVTEFM---VNGSLRHVLLSKERHLDRRKRLII 1153
H NVV + + G++ V +F + G L +VL+ + L KR++
Sbjct: 74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV--KFTLSEIKRVMQ 131
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
+ G+ Y+H I+H D+K N+L+ +D + K+ DFGL++ + +N+
Sbjct: 132 ML--LNGLYYIHRNKILHRDMKAANVLIT-RD---GVLKLADFGLARAFSLAKNSQPNRY 185
Query: 1211 VRG--TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
TL + PELL G +D++ G ++ E+ T
Sbjct: 186 XNRVVTLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMWT 224
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A 1-O-Tolyl-1,2,
3-Triazole-4-Carboxamide
Length = 348
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 105/216 (48%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRT------YRELRL 70
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ + D + LI
Sbjct: 71 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIY 128
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DFGL++ + + G
Sbjct: 129 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFGLARHTDDEMT--GYVA 180
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 181 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 32/235 (13%)
Query: 1050 LGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G +G V K G VAIK+I+ ++ L RE +IL H N+
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIE-------PFDKPLFALRTLREIKILKHFKHENI 71
Query: 1108 VAFYGVVQDGPGGTL--ATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
+ + + + + + ++ L V+ ++ D + I A ++ LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRA--VKVLH 129
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI-----KRNTLVTGGVRGTLPWM-- 1218
N++H DLK NLL+N + KV DFGL++I N+ TG G + ++
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDL----KVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 1219 ----APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYG---AIIGGIV 1266
APE++ +S+K S +DV+S G +L E+ + Y +I GI+
Sbjct: 186 RWYRAPEVM-LTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 41/269 (15%)
Query: 1050 LGSGTFGTVYHGKWRGTD---VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLH--- 1103
LG G FGTV+ G R TD VAIK I ++ G S + +T E +L K+
Sbjct: 39 LGKGGFGTVFAGH-RLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL--EVALLWKVGAGG 95
Query: 1104 -HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGME 1162
HP V+ + G L V E + ++++ L ++
Sbjct: 96 GHPGVIRLLDWFETQEGFML--VLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQ 153
Query: 1163 YLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPEL 1222
+ HS+ +VH D+K +N+L++L+ R K+ DFG + + T GT + PE
Sbjct: 154 HCHSRGVVHRDIKDENILIDLR---RGCAKLIDFGSGALLHDEPYT-DFDGTRVYSPPEW 209
Query: 1223 LNGSSSKVSEKVDVFSFGIVLWEILTGEEPY--------ANMHYGAIIGGIVNNTLRPPV 1274
++ + V+S GI+L++++ G+ P+ A +H+ A +
Sbjct: 210 ISRHQYH-ALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVS----------- 257
Query: 1275 PGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
P C L+ +C AP P RPS EI
Sbjct: 258 PDCC-----ALIRRCLAPKPSSRPSLEEI 281
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 18 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRA---- 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--ERHLDRRK 1149
+RE ++ ++H N++ V P +L + + L L + + LD +
Sbjct: 71 -YRELVLMKCVNHKNIIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 127
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ G+++LHS I+H DLK N++V + K+ DFGL++ + +
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTSFMME 183
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNT 1269
T + APE++ G K E VD++S G ++ E++ + + Y ++
Sbjct: 184 PEVVTRYYRAPEVILGMGYK--ENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ- 240
Query: 1270 LRPPVPGF 1277
L P P F
Sbjct: 241 LGTPCPAF 248
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 32/235 (13%)
Query: 1050 LGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G +G V K G VAIK+I+ ++ L RE +IL H N+
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIE-------PFDKPLFALRTLREIKILKHFKHENI 71
Query: 1108 VAFYGVVQDGPGGTL--ATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
+ + + + + + ++ L V+ ++ D + I A ++ LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRA--VKVLH 129
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI-----KRNTLVTGGVRGTLPWM-- 1218
N++H DLK NLL+N + KV DFGL++I N+ TG G ++
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDL----KVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 1219 ----APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYG---AIIGGIV 1266
APE++ +S+K S +DV+S G +L E+ + Y +I GI+
Sbjct: 186 RWYRAPEVM-LTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 32/235 (13%)
Query: 1050 LGSGTFGTVYHG--KWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
LG G +G V K G VAIK+I+ ++ L RE +IL H N+
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIE-------PFDKPLFALRTLREIKILKHFKHENI 71
Query: 1108 VAFYGVVQDGPGGTL--ATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGMEYLH 1165
+ + + + + + ++ L V+ ++ D + I A ++ LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRA--VKVLH 129
Query: 1166 SKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKI-----KRNTLVTGGVRG------T 1214
N++H DLK NLL+N + KV DFGL++I N+ TG G T
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDL----KVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 1215 LPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYG---AIIGGIV 1266
+ APE++ +S+K S +DV+S G +L E+ + Y +I GI+
Sbjct: 186 RWYRAPEVM-LTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 20/219 (9%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 23 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRA---- 75
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--ERHLDRRK 1149
+RE ++ ++H N++ V P +L + + L L + + LD +
Sbjct: 76 -YRELVLMKCVNHKNIIGLLNVFT--PQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 132
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ G+++LHS I+H DLK N++V + K+ DFGL++ + +
Sbjct: 133 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTSFMMT 188
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
T + APE++ G K E VD++S G ++ E++
Sbjct: 189 PYVVTRYYRAPEVILGMGYK--ENVDLWSVGCIMGEMVC 225
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 19/227 (8%)
Query: 1032 DISTLQIIKNEDLEELKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLT 1089
D+ T + + +ELG G F V G + A K I + R ++
Sbjct: 12 DLGTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQK---- 67
Query: 1090 LEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRK 1149
LE REA I L HPN+V + + + G + + + G L ++++E + +
Sbjct: 68 LE--REARICRLLKHPNIVRLHDSISEE--GHHYLIFDLVTGGELFEDIVAREYYSEADA 123
Query: 1150 RLII--AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTL 1206
I ++A + H +VH DLK +NLL+ K + K+ DFGL+ +++
Sbjct: 124 SHCIQQILEAVL---HCHQMGVVHRDLKPENLLLASKLKGAAV-KLADFGLAIEVEGEQQ 179
Query: 1207 VTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
G GT +++PE+L + VD+++ G++L+ +L G P+
Sbjct: 180 AWFGFAGTPGYLSPEVLR--KDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 20/219 (9%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 12 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRA---- 64
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--ERHLDRRK 1149
+RE ++ ++H N++ V P +L + + L L + + LD +
Sbjct: 65 -YRELVLMKCVNHKNIIGLLNVFT--PQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 121
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ G+++LHS I+H DLK N++V + K+ DFGL++ + +
Sbjct: 122 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTSFMMT 177
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
T + APE++ G K E VD++S G ++ E++
Sbjct: 178 PYVVTRYYRAPEVILGMGYK--ENVDLWSVGCIMGEMVC 214
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ FGL++ + + G
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILGFGLARHTDDEMT--GYVA 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVF--TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ DF L++ + + TG V
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDFYLARHTDDEM-TGYV-A 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 31/220 (14%)
Query: 1045 EELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKL 1102
E+L ++G GTFG V+ + R G VA+K++ +E+E + RE +IL L
Sbjct: 21 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKILQLL 74
Query: 1103 HHPNVVAFYGVVQDGPG------GTLATVTEFM---VNGSLRHVLLSKERHLDRRKRLII 1153
H NVV + + ++ V +F + G L +VL+ + L KR++
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV--KFTLSEIKRVMQ 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSK---IKRNTLVTGG 1210
+ G+ Y+H I+H D+K N+L+ +D + K+ DFGL++ + +N+
Sbjct: 133 ML--LNGLYYIHRNKILHRDMKAANVLIT-RD---GVLKLADFGLARAFSLAKNSQPNRY 186
Query: 1211 VRG--TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILT 1248
TL + PELL G +D++ G ++ E+ T
Sbjct: 187 XNRVVTLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMWT 225
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ D GL++ + + G
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDAGLARHTDDEMT--GYVA 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 27/216 (12%)
Query: 1042 EDLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEIL 1099
E E++ ++G G++G V+ + R G VAIK+ +S +++ L RE +L
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLES---EDDPVIKKIAL---REIRML 56
Query: 1100 SKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAF 1159
+L HPN+V V + L V E+ + ++ H L +R + I
Sbjct: 57 KQLKHPNLVNLLEVFRRK--RRLHLVFEY-CDHTVLHELDRYQRGVPEHLVKSITWQTLQ 113
Query: 1160 GMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGV------RG 1213
+ + H N +H D+K +N+L+ I K+ DFG ++ L+TG
Sbjct: 114 AVNFCHKHNCIHRDVKPENILITKHSVI----KLCDFGFAR-----LLTGPSDYYDDEVA 164
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + +PELL G ++ VDV++ G V E+L+G
Sbjct: 165 TRWYRSPELLVG-DTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 40/265 (15%)
Query: 1034 STLQIIKNEDLEELKELGSGTFGTVY--HGKWRGTDVAIKRIKKSCFTGRSSEQERLTLE 1091
ST ++K + LK +GSG G V + +VAIK++ + F ++ +
Sbjct: 18 STFTVLKR--YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRA---- 70
Query: 1092 FWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK--ERHLDRRK 1149
+RE ++ ++H N++ V P +L + + L L + + LD +
Sbjct: 71 -YRELVLMKCVNHKNIIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 127
Query: 1150 RLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTG 1209
+ G+++LHS I+H DLK N++V + K+ DFGL++ + +
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL----KILDFGLARTAGTSFMME 183
Query: 1210 GVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNT 1269
T + APE++ G K E VD LW + G I+G +V +
Sbjct: 184 PEVVTRYYRAPEVILGMGYK--ENVD-------LWSV------------GCIMGEMVCHK 222
Query: 1270 LRPPVPGFCDSEWRLLMEQCWAPDP 1294
+ P + D +W ++EQ P P
Sbjct: 223 ILFPGRDYID-QWNKVIEQLGTPCP 246
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVF--TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ D GL++ + + TG V
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDRGLARHTDDEM-TGYV-A 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 26/216 (12%)
Query: 1042 EDLEELKELGSGTFGTV---YHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E + L +GSG +G+V + K G VA+K++ + + +++ +RE +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRT------YRELRL 74
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTL-----ATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
L + H NV+ V P +L + ++ L +++ ++ D + LI
Sbjct: 75 LKHMKHENVIGLLDVFT--PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 1154 AMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRG 1213
+ G++Y+HS +I+H DLK NL VN + K+ D GL++ + + G
Sbjct: 133 QI--LRGLKYIHSADIIHRDLKPSNLAVNEDCEL----KILDGGLARHTDDEMT--GYVA 184
Query: 1214 TLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTG 1249
T + APE++ + ++ VD++S G ++ E+LTG
Sbjct: 185 TRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 1094 REAEILSKLH-HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLI 1152
RE IL ++ HP+++ + + V + M G L L K ++ R I
Sbjct: 148 RETHILRQVAGHPHIITLIDSYESS--SFMFLVFDLMRKGELFDYLTEKVALSEKETRSI 205
Query: 1153 IAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR 1212
+ + +LH+ NIVH DLK +N+L++ IR + DFG S +
Sbjct: 206 MR-SLLEAVSFLHANNIVHRDLKPENILLDDNMQIR----LSDFGFSCHLEPGEKLRELC 260
Query: 1213 GTLPWMAPELLNGSSSKV----SEKVDVFSFGIVLWEILTGEEPY 1253
GT ++APE+L S + ++VD+++ G++L+ +L G P+
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 119/273 (43%), Gaps = 51/273 (18%)
Query: 1050 LGSGTFGTVYHGKWRGTD---VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPN 1106
LGSG FG+VY G R +D VAIK ++K R S+ W E+ + P
Sbjct: 45 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKD----RISD--------W--GELPNGTRVPM 89
Query: 1107 VVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE------RHLDRRKRLIIAMDAAFG 1160
V V G G + + F S +L E + R L + +F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 1161 MEYL------HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVR 1212
+ L H+ ++H D+K +N+L++L R K+ DFG + ++T+ T G R
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLN---RGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 1213 GTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
P W+ +G S+ V+S GI+L++++ G+ P+ H IIGG V
Sbjct: 207 VYSPPEWIRYHRYHGRSAA------VWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFRQ 258
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R SE + L+ C A P RP+F EI
Sbjct: 259 R------VSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 119/273 (43%), Gaps = 51/273 (18%)
Query: 1050 LGSGTFGTVYHGKWRGTD---VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPN 1106
LGSG FG+VY G R +D VAIK ++K R S+ W E+ + P
Sbjct: 45 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKD----RISD--------W--GELPNGTRVPM 89
Query: 1107 VVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE------RHLDRRKRLIIAMDAAFG 1160
V V G G + + F S +L E + R L + +F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 1161 MEYL------HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVR 1212
+ L H+ ++H D+K +N+L++L R K+ DFG + ++T+ T G R
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLN---RGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 1213 GTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
P W+ +G S+ V+S GI+L++++ G+ P+ H IIGG V
Sbjct: 207 VYSPPEWIRYHRYHGRSAA------VWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFRQ 258
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R SE + L+ C A P RP+F EI
Sbjct: 259 R------VSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 19/218 (8%)
Query: 1041 NEDLEELKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
E+ + +ELG G F V G + A I + R ++ LE REA I
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK----LE--REARI 63
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII--AMD 1156
L HPN+V + + + G + + + G L ++++E + + I ++
Sbjct: 64 CRLLKHPNIVRLHDSISE--EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE 121
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLVTGGVRGTL 1215
A + H +VH +LK +NLL+ K + K+ DFGL+ +++ G GT
Sbjct: 122 AVL---HCHQMGVVHRNLKPENLLLASKLKGAAV-KLADFGLAIEVEGEQQAWFGFAGTP 177
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+++PE+L + VD+++ G++L+ +L G P+
Sbjct: 178 GYLSPEVLR--KDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus
Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With Fluorinated
Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 119/273 (43%), Gaps = 51/273 (18%)
Query: 1050 LGSGTFGTVYHGKWRGTD---VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPN 1106
LGSG FG+VY G R +D VAIK ++K R S+ W E+ + P
Sbjct: 44 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKD----RISD--------W--GELPNGTRVPM 88
Query: 1107 VVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE------RHLDRRKRLIIAMDAAFG 1160
V V G G + + F S +L E + R L + +F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 1161 MEYL------HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVR 1212
+ L H+ ++H D+K +N+L++L R K+ DFG + ++T+ T G R
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLN---RGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 1213 GTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
P W+ +G S+ V+S GI+L++++ G+ P+ H IIGG V
Sbjct: 206 VYSPPEWIRYHRYHGRSAA------VWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFRQ 257
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R SE + L+ C A P RP+F EI
Sbjct: 258 R------VSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531
Length = 312
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 119/273 (43%), Gaps = 51/273 (18%)
Query: 1050 LGSGTFGTVYHGKWRGTD---VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPN 1106
LGSG FG+VY G R +D VAIK ++K R S+ W E+ + P
Sbjct: 44 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKD----RISD--------W--GELPNGTRVPM 88
Query: 1107 VVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE------RHLDRRKRLIIAMDAAFG 1160
V V G G + + F S +L E + R L + +F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 1161 MEYL------HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVR 1212
+ L H+ ++H D+K +N+L++L R K+ DFG + ++T+ T G R
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLN---RGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 1213 GTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
P W+ +G S+ V+S GI+L++++ G+ P+ H IIGG V
Sbjct: 206 VYSPPEWIRYHRYHGRSAA------VWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFRQ 257
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R SE + L+ C A P RP+F EI
Sbjct: 258 R------VSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 35/203 (17%)
Query: 1095 EAEILSKLHHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
E + +HPN+V + + D L VT FM GS + ++ + +D L I
Sbjct: 60 ELHVSKLFNHPNIVPYRATFIADN---ELWVVTSFMAYGSAKDLICT--HFMDGMNELAI 114
Query: 1154 AM---DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN-TLVTG 1209
A ++Y+H VH +K ++L+++ G LS ++ N ++++
Sbjct: 115 AYILQGVLKALDYIHHMGYVHRSVKASHILISVD---------GKVYLSGLRSNLSMISH 165
Query: 1210 GVR------------GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMH 1257
G R LPW++PE+L + K D++S GI E+ G P+ +M
Sbjct: 166 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 225
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDS 1280
++ +N T VP D+
Sbjct: 226 ATQMLLEKLNGT----VPCLLDT 244
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 35/203 (17%)
Query: 1095 EAEILSKLHHPNVVAFYG-VVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII 1153
E + +HPN+V + + D L VT FM GS + ++ + +D L I
Sbjct: 76 ELHVSKLFNHPNIVPYRATFIADN---ELWVVTSFMAYGSAKDLICT--HFMDGMNELAI 130
Query: 1154 AM---DAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN-TLVTG 1209
A ++Y+H VH +K ++L+++ G LS ++ N ++++
Sbjct: 131 AYILQGVLKALDYIHHMGYVHRSVKASHILISVD---------GKVYLSGLRSNLSMISH 181
Query: 1210 GVR------------GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMH 1257
G R LPW++PE+L + K D++S GI E+ G P+ +M
Sbjct: 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241
Query: 1258 YGAIIGGIVNNTLRPPVPGFCDS 1280
++ +N T VP D+
Sbjct: 242 ATQMLLEKLNGT----VPCLLDT 260
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 19/218 (8%)
Query: 1041 NEDLEELKELGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEI 1098
++ + +++G G F V G + A K I T + S ++ LE REA I
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIIN----TKKLSARDHQKLE--REARI 56
Query: 1099 LSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLII--AMD 1156
L H N+V + + + G V + + G L ++++E + + I ++
Sbjct: 57 CRLLKHSNIVRLHDSISEE--GFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE 114
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS-KIKRNTLVTGGVRGTL 1215
A + H +VH DLK +NLL+ K + K+ DFGL+ +++ + G GT
Sbjct: 115 AVL---HCHQMGVVHRDLKPENLLLASKCKGAAV-KLADFGLAIEVQGDQQAWFGFAGTP 170
Query: 1216 PWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
+++PE+L + + VD+++ G++L+ +L G P+
Sbjct: 171 GYLSPEVLRKEA--YGKPVDIWACGVILYILLVGYPPF 206
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 119/273 (43%), Gaps = 51/273 (18%)
Query: 1050 LGSGTFGTVYHGKWRGTD---VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPN 1106
LGSG FG+VY G R +D VAIK ++K R S+ W E+ + P
Sbjct: 12 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKD----RISD--------W--GELPNGTRVPM 56
Query: 1107 VVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE------RHLDRRKRLIIAMDAAFG 1160
V V G G + + F S +L E + R L + +F
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 1161 MEYL------HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVR 1212
+ L H+ ++H D+K +N+L++L R K+ DFG + ++T+ T G R
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENILIDLN---RGELKLIDFGSGALLKDTVYTDFDGTR 173
Query: 1213 GTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
P W+ +G S+ V+S GI+L++++ G+ P+ H IIGG V
Sbjct: 174 VYSPPEWIRYHRYHGRSAA------VWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFRQ 225
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R SE + L+ C A P RP+F EI
Sbjct: 226 R------VSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 103/232 (44%), Gaps = 26/232 (11%)
Query: 1024 VDLALGNFDISTLQIIKNEDLEELKELGSGTFGTVYHGKWRGTDVA-IKRIKKSCFTGRS 1082
VDL N ++ E E L +G G++G V K R D I IKK +
Sbjct: 12 VDLGTENLYFQSM-----EKYENLGLVGEGSYGMVM--KCRNKDTGRIVAIKKFLESDDD 64
Query: 1083 SEQERLTLEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE 1142
+++ + RE ++L +L H N+V V + L V EF V+ ++ L
Sbjct: 65 KMVKKIAM---REIKLLKQLRHENLVNLLEVCKKKKRWYL--VFEF-VDHTILDDLELFP 118
Query: 1143 RHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIK 1202
LD + G+ + HS NI+H D+K +N+LV+ + K+ DFG +
Sbjct: 119 NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSG----VVKLCDFGFA--- 171
Query: 1203 RNTLVTGGVR----GTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGE 1250
R G V T + APELL G K + VDV++ G ++ E+ GE
Sbjct: 172 RTLAAPGEVYDDEVATRWYRAPELLVG-DVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A
Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With A
Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A
Tetracyclic Atp Site Inhibitor
Length = 299
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 121/308 (39%), Gaps = 55/308 (17%)
Query: 1034 STLQIIKNEDLEELKE----LGSGTFGTVYH--GKWRGTDVAIKRIKKSCFTGRSSEQER 1087
S LQI KN +++ K LG G G V K A+K ++ R E
Sbjct: 6 SGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELH- 64
Query: 1088 LTLEFWREAEILSKLHHPNVVAFYGVVQDGPGG--TLATVTEFMVNGSLRHVLLSK-ERH 1144
WR ++ P++V V ++ G L V E + G L + + ++
Sbjct: 65 -----WRASQC------PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 113
Query: 1145 LDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRN 1204
R+ I ++YLHS NI H D+K +NLL K P I K+ DFG +K
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP-NAILKLTDFGFAK---- 168
Query: 1205 TLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGG 1264
+ K + D++S G++++ +L G P+ + H AI G
Sbjct: 169 -------------------ETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG 209
Query: 1265 IVNNTLRPPVPGFCDSEW-------RLLMEQCWAPDPVVRPSFTEIARRLRVM--SAACQ 1315
+ +R F + EW ++L+ +P R + TE +M + Q
Sbjct: 210 M-KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 268
Query: 1316 TKSHGHQV 1323
T H +V
Sbjct: 269 TPLHTSRV 276
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 41/294 (13%)
Query: 1043 DLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
+ EL+++GSG FG+V+ R G AIKR KK G EQ L RE +
Sbjct: 10 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP-LAGSVDEQNAL-----REVYAHA 63
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIA---MD 1156
L H +VV ++ + + E+ GSL + R + K + +
Sbjct: 64 VLGQHSHVVRYFSAWAED--DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 121
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPI----------------RPICKVGDFG-LS 1199
G+ Y+HS ++VH D+K N+ ++ + I + + K+GD G ++
Sbjct: 122 VGRGLRYIHSMSLVHMDIKPSNIFIS-RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 180
Query: 1200 KIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYG 1259
+I + G R ++A E+L + + + K D+F+ + + G EP G
Sbjct: 181 RISSPQVEEGDSR----FLANEVLQENYTHLP-KADIFALALTV-VCAAGAEPLPR--NG 232
Query: 1260 AIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAA 1313
I L P +P E+ L++ PDP RPS + + ++SA+
Sbjct: 233 DQWHEIRQGRL-PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS 285
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 41/294 (13%)
Query: 1043 DLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
+ EL+++GSG FG+V+ R G AIKR KK G EQ L RE +
Sbjct: 10 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP-LAGSVDEQNAL-----REVYAHA 63
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIA---MD 1156
L H +VV ++ + + E+ GSL + R + K + +
Sbjct: 64 VLGQHSHVVRYFSAWAED--DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 121
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPI----------------RPICKVGDFG-LS 1199
G+ Y+HS ++VH D+K N+ ++ + I + + K+GD G ++
Sbjct: 122 VGRGLRYIHSMSLVHMDIKPSNIFIS-RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 180
Query: 1200 KIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYG 1259
+I + G R ++A E+L + + + K D+F+ + + G EP G
Sbjct: 181 RISSPQVEEGDSR----FLANEVLQENYTHLP-KADIFALALTV-VCAAGAEPLPR--NG 232
Query: 1260 AIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAA 1313
I L P +P E+ L++ PDP RPS + + ++SA+
Sbjct: 233 DQWHEIRQGRL-PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS 285
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 41/294 (13%)
Query: 1043 DLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
+ EL+++GSG FG+V+ R G AIKR KK G EQ L RE +
Sbjct: 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP-LAGSVDEQNAL-----REVYAHA 65
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIA---MD 1156
L H +VV ++ + + E+ GSL + R + K + +
Sbjct: 66 VLGQHSHVVRYFSAWAED--DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 123
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPI----------------RPICKVGDFG-LS 1199
G+ Y+HS ++VH D+K N+ ++ + I + + K+GD G ++
Sbjct: 124 VGRGLRYIHSMSLVHMDIKPSNIFIS-RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 182
Query: 1200 KIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYG 1259
+I + G R ++A E+L + + + K D+F+ + + G EP G
Sbjct: 183 RISSPQVEEGDSR----FLANEVLQENYTHLP-KADIFALALTV-VCAAGAEPLPR--NG 234
Query: 1260 AIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAA 1313
I L P +P E+ L++ PDP RPS + + ++SA+
Sbjct: 235 DQWHEIRQGRL-PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS 287
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 41/294 (13%)
Query: 1043 DLEELKELGSGTFGTVYHGKWR--GTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILS 1100
+ EL+++GSG FG+V+ R G AIKR KK G EQ L RE +
Sbjct: 8 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP-LAGSVDEQNAL-----REVYAHA 61
Query: 1101 KL-HHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKERHLDRRKRLIIA---MD 1156
L H +VV ++ + + E+ GSL + R + K + +
Sbjct: 62 VLGQHSHVVRYFSAWAED--DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 119
Query: 1157 AAFGMEYLHSKNIVHFDLKCDNLLVNLKDPI----------------RPICKVGDFG-LS 1199
G+ Y+HS ++VH D+K N+ ++ + I + + K+GD G ++
Sbjct: 120 VGRGLRYIHSMSLVHMDIKPSNIFIS-RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 178
Query: 1200 KIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYG 1259
+I + G R ++A E+L + + + K D+F+ + + G EP G
Sbjct: 179 RISSPQVEEGDSR----FLANEVLQENYTHLP-KADIFALALTVVXA-AGAEPLPR--NG 230
Query: 1260 AIIGGIVNNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAA 1313
I L P +P E+ L++ PDP RPS + + ++SA+
Sbjct: 231 DQWHEIRQGRL-PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS 283
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And The
Jnk Inhibitor V
Length = 314
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 118/273 (43%), Gaps = 51/273 (18%)
Query: 1050 LGSGTFGTVYHGKWRGTD---VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPN 1106
LGSG FG+VY G R +D VAIK ++K R S+ W E+ + P
Sbjct: 45 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKD----RISD--------W--GELPNGTRVPM 89
Query: 1107 VVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE------RHLDRRKRLIIAMDAAFG 1160
V V G G + + F S +L E + R L + +F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 1161 MEYL------HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVR 1212
+ L H+ ++H D+K +N+L++L R K+ DFG + ++T+ T G R
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLN---RGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 1213 GTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
P W+ +G S+ V+S GI+L++++ G+ P+ H IIGG V
Sbjct: 207 VYSPPEWIRYHRYHGRSAA------VWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFRQ 258
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R E + L+ C A P RP+F EI
Sbjct: 259 R------VSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 118/273 (43%), Gaps = 51/273 (18%)
Query: 1050 LGSGTFGTVYHGKWRGTD---VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPN 1106
LGSG FG+VY G R +D VAIK ++K R S+ W E+ + P
Sbjct: 45 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKD----RISD--------W--GELPNGTRVPM 89
Query: 1107 VVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE------RHLDRRKRLIIAMDAAFG 1160
V V G G + + F S +L E + R L + +F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 1161 MEYL------HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVR 1212
+ L H+ ++H D+K +N+L++L R K+ DFG + ++T+ T G R
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLN---RGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 1213 GTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
P W+ +G S+ V+S GI+L++++ G+ P+ H IIGG V
Sbjct: 207 VYSPPEWIRYHRYHGRSAA------VWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFRQ 258
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R E + L+ C A P RP+F EI
Sbjct: 259 R------VSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 36/287 (12%)
Query: 1050 LGSGTFGTVYHGK--WRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLH-HPN 1106
L G F VY + G + A+KR+ S+E+E+ +E + KL HPN
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRL-------LSNEEEK-NRAIIQEVCFMKKLSGHPN 87
Query: 1107 VVAFYGVVQDGPGGTLATVTEFMV-----NGSLRHVLLSKERH--LDRRKRLIIAMDAAF 1159
+V F G + EF++ G L L E L L I
Sbjct: 88 IVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCR 147
Query: 1160 GMEYLHSKN--IVHFDLKCDNLLVNLKDPIRPICKVG---------DFGLSKIKRNTLVT 1208
++++H + I+H DLK +NLL++ + I+ +C G D+ S +R +
Sbjct: 148 AVQHMHRQKPPIIHRDLKVENLLLSNQGTIK-LCDFGSATTISHYPDYSWSAQRRALVEE 206
Query: 1209 GGVRGTLP-WMAPELLN-GSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIV 1266
R T P + PE+++ S+ + EK D+++ G +L+ + + P+ + GA + IV
Sbjct: 207 EITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED---GAKL-RIV 262
Query: 1267 NNTLRPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEIARRLRVMSAA 1313
N P + + L+ +P R S E+ +L+ ++AA
Sbjct: 263 NGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 118/273 (43%), Gaps = 51/273 (18%)
Query: 1050 LGSGTFGTVYHGKWRGTD---VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPN 1106
LGSG FG+VY G R +D VAIK ++K R S+ W E+ + P
Sbjct: 44 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKD----RISD--------W--GELPNGTRVPM 88
Query: 1107 VVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE------RHLDRRKRLIIAMDAAFG 1160
V V G G + + F S +L E + R L + +F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 1161 MEYL------HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVR 1212
+ L H+ ++H D+K +N+L++L R K+ DFG + ++T+ T G R
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLN---RGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 1213 GTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
P W+ +G S+ V+S GI+L++++ G+ P+ H IIGG V
Sbjct: 206 VYSPPEWIRYHRYHGRSAA------VWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFRQ 257
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R E + L+ C A P RP+F EI
Sbjct: 258 R------VSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 1044 LEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLH 1103
L+ L+ G FG V+ + VA+K Q++ + + E L +
Sbjct: 26 LQLLEVKARGRFGCVWKAQLLNEYVAVKIFPI---------QDKQSWQNEYEVYSLPGMK 76
Query: 1104 HPNVVAFYGVVQDGPGGT--LATVTEFMVNGSLRHVLLSKERHLDRRKRLIIAMDAAFGM 1161
H N++ F G + G L +T F GSL L K + + IA A G+
Sbjct: 77 HENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL--KANVVSWNELCHIAETMARGL 134
Query: 1162 EYLHSK----------NIVHFDLKCDNLLVNLKDPIRPICKVGDFGLS---KIKRNTLVT 1208
YLH I H D+K N+L LK+ + + DFGL+ + ++ T
Sbjct: 135 AYLHEDIPGLKDGHKPAISHRDIKSKNVL--LKNNLTAC--IADFGLALKFEAGKSAGDT 190
Query: 1209 GGVRGTLPWMAPELLNGSSSKVSE---KVDVFSFGIVLWEI 1246
G GT +MAPE+L G+ + + ++D+++ G+VLWE+
Sbjct: 191 HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With Inhibitor
(2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 118/273 (43%), Gaps = 51/273 (18%)
Query: 1050 LGSGTFGTVYHGKWRGTD---VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPN 1106
LGSG FG+VY G R +D VAIK ++K R S+ W E+ + P
Sbjct: 17 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKD----RISD--------W--GELPNGTRVPM 61
Query: 1107 VVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE------RHLDRRKRLIIAMDAAFG 1160
V V G G + + F S +L E + R L + +F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 1161 MEYL------HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVR 1212
+ L H+ ++H D+K +N+L++L R K+ DFG + ++T+ T G R
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLN---RGELKLIDFGSGALLKDTVYTDFDGTR 178
Query: 1213 GTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
P W+ +G S+ V+S GI+L++++ G+ P+ H II G V
Sbjct: 179 VYSPPEWIRYHRYHGRSAA------VWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQ 230
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R SE + L+ C A P RP+F EI
Sbjct: 231 R------VSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 100/237 (42%), Gaps = 55/237 (23%)
Query: 1048 KELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPNV 1107
+++GSG+FG +Y GT++ +++E+ + LE K HP +
Sbjct: 13 RKIGSGSFGEIY----LGTNI------------QTNEEVAIKLE-------NVKTKHPQL 49
Query: 1108 V---AFYGVVQDGPGGTLATVTEFMVNG------------SLRHVLLSKERHLDRRKRLI 1152
+ Y ++Q G G + V F V G SL + R L + L+
Sbjct: 50 LYESKIYRILQGGTG--IPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLM 107
Query: 1153 IAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVR 1212
+A +E++HSK+ +H D+K DN L+ L + + DFGL+K R+T
Sbjct: 108 LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYII-DFGLAKKYRDT----STH 162
Query: 1213 GTLPWMAPELLNGSSSKV----------SEKVDVFSFGIVLWEILTGEEPYANMHYG 1259
+P+ + L G++ S + D+ S G VL L G P+ + G
Sbjct: 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG 219
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 118/273 (43%), Gaps = 51/273 (18%)
Query: 1050 LGSGTFGTVYHGKWRGTD---VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPN 1106
LGSG FG+VY G R +D VAIK ++K R S+ W E+ + P
Sbjct: 59 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKD----RISD--------W--GELPNGTRVPM 103
Query: 1107 VVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE------RHLDRRKRLIIAMDAAFG 1160
V V G G + + F S +L E + R L + +F
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 1161 MEYL------HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVR 1212
+ L H+ ++H D+K +N+L++L R K+ DFG + ++T+ T G R
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLN---RGELKLIDFGSGALLKDTVYTDFDGTR 220
Query: 1213 GTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
P W+ +G S+ V+S GI+L++++ G+ P+ H II G V
Sbjct: 221 VYSPPEWIRYHRYHGRSAA------VWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQ 272
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R SE + L+ C A P RP+F EI
Sbjct: 273 R------VSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 1163 YLHS-KNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPE 1221
Y+H+ KNI H D+K N+L++ + K+ DFG S+ + + G RGT +M PE
Sbjct: 166 YIHNEKNICHRDVKPSNILMDKNGRV----KLSDFGESEYMVDKKIKGS-RGTYEFMPPE 220
Query: 1222 LLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYA 1254
+ SS KVD++S GI L+ + P++
Sbjct: 221 FFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With (3e)-3-[(4-
Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 118/273 (43%), Gaps = 51/273 (18%)
Query: 1050 LGSGTFGTVYHGKWRGTD---VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPN 1106
LGSG FG+VY G R +D VAIK ++K R S+ W E+ + P
Sbjct: 16 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKD----RISD--------W--GELPNGTRVPM 60
Query: 1107 VVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE------RHLDRRKRLIIAMDAAFG 1160
V V G G + + F S +L E + R L + +F
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 120
Query: 1161 MEYL------HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVR 1212
+ L H+ ++H D+K +N+L++L R K+ DFG + ++T+ T G R
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLN---RGELKLIDFGSGALLKDTVYTDFDGTR 177
Query: 1213 GTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
P W+ +G S+ V+S GI+L++++ G+ P+ H II G V
Sbjct: 178 VYSPPEWIRYHRYHGRSAA------VWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQ 229
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R SE + L+ C A P RP+F EI
Sbjct: 230 R------VSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 118/273 (43%), Gaps = 51/273 (18%)
Query: 1050 LGSGTFGTVYHGKWRGTD---VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPN 1106
LGSG FG+VY G R +D VAIK ++K R S+ W E+ + P
Sbjct: 31 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKD----RISD--------W--GELPNGTRVPM 75
Query: 1107 VVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE------RHLDRRKRLIIAMDAAFG 1160
V V G G + + F S +L E + R L + +F
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 135
Query: 1161 MEYL------HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVR 1212
+ L H+ ++H D+K +N+L++L R K+ DFG + ++T+ T G R
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENILIDLN---RGELKLIDFGSGALLKDTVYTDFDGTR 192
Query: 1213 GTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
P W+ +G S+ V+S GI+L++++ G+ P+ H II G V
Sbjct: 193 VYSPPEWIRYHRYHGRSAA------VWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQ 244
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R SE + L+ C A P RP+F EI
Sbjct: 245 R------VSSECQHLIRWCLALRPSDRPTFEEI 271
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 118/273 (43%), Gaps = 51/273 (18%)
Query: 1050 LGSGTFGTVYHGKWRGTD---VAIKRIKKSCFTGRSSEQERLTLEFWREAEILSKLHHPN 1106
LGSG FG+VY G R +D VAIK ++K R S+ W E+ + P
Sbjct: 16 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKD----RISD--------W--GELPNGTRVPM 60
Query: 1107 VVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSKE------RHLDRRKRLIIAMDAAFG 1160
V V G G + + F S +L E + R L + +F
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF 120
Query: 1161 MEYL------HSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT--GGVR 1212
+ L H+ ++H D+K +N+L++L R K+ DFG + ++T+ T G R
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLN---RGELKLIDFGSGALLKDTVYTDFDGTR 177
Query: 1213 GTLP--WMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1270
P W+ +G S+ V+S GI+L++++ G+ P+ H II G V
Sbjct: 178 VYSPPEWIRYHRYHGRSAA------VWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQ 229
Query: 1271 RPPVPGFCDSEWRLLMEQCWAPDPVVRPSFTEI 1303
R SE + L+ C A P RP+F EI
Sbjct: 230 R------VSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 1094 REAEILSKLH-HPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVLLSK----ERHLDRR 1148
+E +IL K+ HPN++ + L V + M G L L K E+ +
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFL--VFDLMKKGELFDYLTEKVTLSEKETRKI 129
Query: 1149 KRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVT 1208
R ++ + A LH NIVH DLK +N+L++ I K+ DFG S
Sbjct: 130 MRALLEVICA-----LHKLNIVHRDLKPENILLDDDMNI----KLTDFGFSCQLDPGEKL 180
Query: 1209 GGVRGTLPWMAPEL----LNGSSSKVSEKVDVFSFGIVLWEILTGEEPY 1253
V GT ++APE+ +N + ++VD++S G++++ +L G P+
Sbjct: 181 RSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.312 0.130 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,827,169
Number of Sequences: 62578
Number of extensions: 1725127
Number of successful extensions: 6385
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 442
Number of HSP's that attempted gapping in prelim test: 3312
Number of HSP's gapped (non-prelim): 1206
length of query: 1329
length of database: 14,973,337
effective HSP length: 110
effective length of query: 1219
effective length of database: 8,089,757
effective search space: 9861413783
effective search space used: 9861413783
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)