Your job contains 1 sequence.
>000727
MANQSKEMMEEESCLLSAAAFEERVIETAKRCQQRHDSPVMWAVEMTRCLKSGSGSVVEL
GEVLVSYLCFQNNHPSLWKFLDYALTSNLLSPIHILSLLTSRVIPHRRSQPQAFRLYLEL
LSRYALNFHAVASEDCNVKIIESIEACLQLSRTYNVRVVEFGHALVLSFFDLVVRLIDSL
FEDMGLQVGPLDQQSMEIDSIGNFCVGNNEHFEQIRRKNSLLVIEVLNKLMDSSKAMVLL
RLIHFNMPESFNGLLQRLQFLEANKLESSKLKTVSQLLARLCDNVRNVPSYDYKLNKHRF
IGMLIDTKSLRPMRSCNSESSWSSCWLSFDIFMENSMDGKQLPVTSAIIVLTRIITTLRV
LNRASWQETFLALWLSALRLVQRERDPPEGPLPHLEARLGILLSIVPLAIANVLAEQANI
QLSTLQGSKTSGSIETGCGHGMEEKSLASKKEGLVSSLQALGNFSALLCPPASVACEANN
AAAKAASFISVSKNMKDGICSGSPSETLLNSGGNMRHLIVEACIARNLIDTSAYYWPGYV
SASVIAVNEFSPVQKSPWSMFMEGAPLNGSLVNLLFSTPASSLAEIEKLYHIALTGSAEE
RSAAAKILCGASLARGWNIQEHVVRFVVKLLSPPIPPGYTGPRSHLVDHMPMLTAIFFGA
SSVDTVHILSLHGLVPDVVASLMPLCEVFGSLVPTSSSKSSTGDEPSVYMVFSCAFLFLV
RLWKFYRSPHELCLSGGTLAGELTLEYLLLLHNSHIASRTSAAQSERNSNLDQLDTVSDD
PIYIDHFPKLRAWYCQNKTCIASTLSGLCSGNPVHQVANKILSMIYSKMTKTGASSSNSS
TPPSGSASESPACTGEDAYQRPMLPAWEVLEAIPFVLEAILSACAYGRLSSRDLITGLRE
LVDFLPASIATIISYFSAEISRGIWKAVPMNGTDWPSPAPMLPSIESEIKEILAAVGVSV
PCCSAGTSPLTLPLPVAVLVSLTITFKLTKSLDYIHAVIGPALENCAAGCSWPCIPIIGS
LWAQKVRRWHDFIVVSCSRSVFWKNQEAVSQLLRSCFTSFLGSLHVSSLLTNQSSVNNLL
GSVVAARAVCPSLAPGYLYLRSCRTIHNVQHVNDVIVGLVAEFAREAAAKWASSDLPRLK
SSQASLSLATSKAREVASLGASLLCATAGLQVVQELYRETIPTWLLSSRDEKLGKVSAVA
HIMEGYAMAYMWVLSGGLIWGFEAKMPSWAVSRRRYLIGTHFEYLSRALEGNIKLGCDPA
TWRAYVSCLVGLVVSSAPAWIQEVRPETLRKLASGLRGWHECELALSLLERGGIGSIPSV
MELLHVIN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000727
(1328 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2088050 - symbol:RFR1 "AT3G23590" species:3702... 1774 4.3e-237 2
TAIR|locus:2039356 - symbol:REF4 "AT2G48110" species:3702... 1591 1.6e-218 4
>TAIR|locus:2088050 [details] [associations]
symbol:RFR1 "AT3G23590" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0016592
"mediator complex" evidence=IDA] [GO:2000762 "regulation of
phenylpropanoid metabolic process" evidence=IMP] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] EMBL:CP002686
GO:GO:0006355 GO:GO:0009698 GO:GO:0006351 EMBL:AB023036
GO:GO:0016592 EMBL:AK117119 EMBL:AK230008 IPI:IPI00527950
RefSeq:NP_189001.1 UniGene:At.23102 IntAct:Q9LUG9 PRIDE:Q9LUG9
EnsemblPlants:AT3G23590.1 GeneID:821938 KEGG:ath:AT3G23590
TAIR:At3g23590 eggNOG:NOG257621 HOGENOM:HOG000242204
InParanoid:Q9LUG9 OMA:LTITYKI PhylomeDB:Q9LUG9
ProtClustDB:CLSN2684326 Genevestigator:Q9LUG9 GO:GO:2000762
Uniprot:Q9LUG9
Length = 1309
Score = 1774 (629.5 bits), Expect = 4.3e-237, Sum P(2) = 4.3e-237
Identities = 370/903 (40%), Positives = 529/903 (58%)
Query: 441 GMEEKSLASKKEGLVSSLQALGNFSALLCPPXXXXXXXXXXXXXXXXXXXXXXNMKDGIC 500
G E + ++ LV+SLQ LG+F LL PP K
Sbjct: 415 GKYESVMEKLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFLSGGNVGKSCFD 474
Query: 501 SGSPSETLLNSGGNMRHLIVEACIARNLIDTSAYYWPGYVSASVIAVNEFSPVQKSPWSM 560
+ + +N GNMRHLIVEACIARN++D SAY WPGYV+ + + + P + WS
Sbjct: 475 VINMKDMPVNCSGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIPQSLPNEVPCWSS 534
Query: 561 FMEGAPLNGSLVNLLFSTPASSLAEIEKLYHIALTGSAEERSAAAKILCGASLARGWNIQ 620
F++GAPLN ++VN L S PASSLAE+EKL+ +A+ GS +E+ +AA +LCGASL RGWNIQ
Sbjct: 535 FVKGAPLNAAMVNTLVSVPASSLAELEKLFEVAVKGSDDEKISAATVLCGASLTRGWNIQ 594
Query: 621 EHVVRFVVKLLSPPIPPGYTGPRSHLVDHMPMLTAIFFGASSVDTVHILSLHGLVPDVVA 680
EH V ++ +LLSPP+P Y+ +HL+ + ML + G SVD++ I SLHG+VP +
Sbjct: 595 EHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGSVDSIQIFSLHGMVPQLAC 654
Query: 681 SLMPLCEVFGSLVPTXXXXXXTGDEPSVYMVFSCAFLFLVRLWKFYRSPHEL-CXXXXXX 739
SLMP+CE FGS P+ +G+ S Y VFS AF L++LW+F P E
Sbjct: 655 SLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKLWRFNHPPIEHGVGDVPTV 714
Query: 740 XXXXXXXXXXXXHNSHIASRTSAAQSERNSNLDQLD-TVSDDPIYIDHFPKLRAWYCQNK 798
NS++ S + L ++ S P+++D FPKL+ WY Q++
Sbjct: 715 GSQLTPEHLLSVRNSYLVSSEILDRDRNRKRLSEVARAASCQPVFVDSFPKLKVWYRQHQ 774
Query: 799 TCIASTLSGLCSGNPVHQVANKILSMIYSKMTKTGXXXXXXXXXXXXXXXXXXXCTGEDA 858
CIA+TLSGL G+PVHQ +L+M + K+ + ED+
Sbjct: 775 RCIAATLSGLTHGSPVHQTVEALLNMTFGKVRGS-----QTLNPVNSGTSSSSGAASEDS 829
Query: 859 YQRPMLPAWEVLEAIPFVLEAILSACAYGRLSSRDLITGLRELVDFLPASIATIISYFSA 918
RP PAW++L+A+P+V++A L+AC +GRLS R L TGL++L DFLPAS+ATI+SYFSA
Sbjct: 830 NIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATGLKDLADFLPASLATIVSYFSA 889
Query: 919 EISRGIWKAVPMNGTDWPSPAPMLPSIESEIKEILAAVGVSVPCCSAGXXXXXXXXX-XX 977
E+SRG+WK V MNG DWPSPA L ++E I +ILA GV +P + G
Sbjct: 890 EVSRGVWKPVFMNGVDWPSPATNLSTVEEYITKILATTGVDIPSLAPGGSSPATLPLPLA 949
Query: 978 XXXXXXITFKLTKSLDYIHAVIGPALENCAAGCSWPCIPIIGSLWAQKVRRWHDFIVVSC 1037
IT+K+ K+ + + GPALE AAGC WPC+PI+ SLW QK +RW DF+V S
Sbjct: 950 AFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASLWTQKAKRWFDFLVFSA 1009
Query: 1038 SRSVFWKNQEAVSQLLRSCFTSFLGSLHVSSLLTNQSSVNNLLGSVVAAR---AVCPSLA 1094
SR+VF NQ+AV QLLR+CF++ LG L+ + + +N V LLG + + P +A
Sbjct: 1010 SRTVFLHNQDAVIQLLRNCFSATLG-LNAAPM-SNDGGVGALLGHGFGSHFYGGISP-VA 1066
Query: 1095 PGYLYLRSCRTIHNVQHVNDVIVGLVXXXXXXXXXXXXSSD-LPRLKS-------SQASL 1146
PG LYLR R + + V++ I+ L+ S + L +LK+ Q+SL
Sbjct: 1067 PGILYLRMYRALRDTVSVSEEILSLLIHSVEDIAQNRLSKEKLEKLKTVKNGSRYGQSSL 1126
Query: 1147 SLATSKAREVASLGASLLCATAGLQVVQELYRETIPTWLLSS--RDEKLGKVSAVAHIME 1204
+ A ++ + ASL ASL+ T GL VV L +ETIP+W LS+ D + G VA +
Sbjct: 1127 ATAMTQVKLAASLSASLVWLTGGLGVVHVLIKETIPSWFLSTDKSDREQGPSDLVAEL-R 1185
Query: 1205 GYAMAYMWVLSGGLIWGFEAKMPSWAVSRRRYLIGTHFEYLSRALEGNIKLGCDPATWRA 1264
G+A+AY VL G L WG +++ S + RR+ ++G+H E+++ AL+G I +GC+ ATWR
Sbjct: 1186 GHALAYFVVLCGALTWGVDSRS-SASKRRRQAILGSHLEFIASALDGKISVGCETATWRT 1244
Query: 1265 YVSCLVGLVVSSAPAWIQEVRPETLRKLASGLRGWHECELALSLLERGGIGSIPSVME-L 1323
Y+S LV L+VS P W+ E+ E L+ L++GLR W + ELA+ LL GG+ ++ + +
Sbjct: 1245 YISGLVSLMVSCLPLWVTEIDTEVLKSLSNGLRKWGKDELAIVLLSLGGLKTMDYAADFI 1304
Query: 1324 LHV 1326
+H+
Sbjct: 1305 IHL 1307
Score = 535 (193.4 bits), Expect = 4.3e-237, Sum P(2) = 4.3e-237
Identities = 137/404 (33%), Positives = 211/404 (52%)
Query: 25 VIETAKRCQQRHDSPVMWAVEMTRCLKSGSGSV--VELGEVLVSYLCFQNNHPSLWKFLD 82
VIE K Q+ P +WA +++ LK + + EL EV+VSY+C+ NN P +WKFL+
Sbjct: 13 VIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVPIVWKFLE 72
Query: 83 YALTSNLLSPIHILSLLTSRVIPHRRSQPQAFRLYLELLSRYALNFHAVASEDCNVKIIE 142
A+ L+SP+ +L+LL RV+P R +Q A+R+YLELL R S K++
Sbjct: 73 RAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKDHISGPHYQKVMI 132
Query: 143 SIEACLQLSRTYNVRVVEFGHALVLSFFDLVVRLIDSLFEDMGLQVGPLDQ--------Q 194
S+ L+LS +++ + G LV F +V +L+D+ D GL D Q
Sbjct: 133 SVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELSQDSSSQWLVKSQ 192
Query: 195 SMEIDSIGNFCVGNNEHFEQIRRKNSLLVIEVLNKLMDSSKAMVLLRLIHFNMPESFNGL 254
MEID+ + E+++ N+++ IE++ + + ++ LL L+ N ++
Sbjct: 193 DMEIDAPERYNEKTGS-LEKLQSLNTIMAIELIAEFLRNTVIARLLYLVSSNRASKWHEF 251
Query: 255 LQRLQFLEANK--LESSKLKTVSQLLARLCDNVRNVPSYDYKLNKHRFIGMLIDTKSLRP 312
+Q++Q L N L+ SK+ LL +L N R SYD K+ R ++D SL
Sbjct: 252 VQKVQLLGENSSALKHSKVLNSGDLL-QLISNRRFGYSYDSKVTSARKSNAIVDFGSLSS 310
Query: 313 MRXXXXXXXXXXXXXXFDIFMENSMDGKQLPVTSAXXXXXXXXXXXXXXNRASWQETFLA 372
D+ E++MDG Q+ TSA N ++W +TFL
Sbjct: 311 YAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEINGSTWHDTFLG 370
Query: 373 LWLSALRLVQRERDPPEGPLPHLEARLGILLSIVPLAIANVLAE 416
LW++ALRLVQRERDP EGP+P L+ RL + L IVPL +AN++ E
Sbjct: 371 LWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEE 414
>TAIR|locus:2039356 [details] [associations]
symbol:REF4 "AT2G48110" species:3702 "Arabidopsis
thaliana" [GO:0009698 "phenylpropanoid metabolic process"
evidence=IMP] [GO:0016020 "membrane" evidence=TAS] [GO:2000762
"regulation of phenylpropanoid metabolic process" evidence=IGI]
EMBL:CP002685 GO:GO:0016020 GO:GO:0006355 GO:GO:0009698
GO:GO:0006351 EMBL:AC006072 GO:GO:0016592 eggNOG:NOG257621
HOGENOM:HOG000242204 GO:GO:2000762 EMBL:X96481 IPI:IPI00517586
PIR:E84923 RefSeq:NP_566125.4 UniGene:At.36290 PRIDE:F4IN69
EnsemblPlants:AT2G48110.1 GeneID:819423 KEGG:ath:AT2G48110
TAIR:At2g48110 InParanoid:Q9ZU78 OMA:ALWLPID Uniprot:F4IN69
Length = 1275
Score = 1591 (565.1 bits), Expect = 1.6e-218, Sum P(4) = 1.6e-218
Identities = 333/784 (42%), Positives = 470/784 (59%)
Query: 556 SPWSMFMEGAPLNGSLVNLLFSTPASSLAEIEKLYHIALTGSAEERSAAAKILCGASLAR 615
S WS+ M+G+PL SL N L +TPASSLAEIEK+Y +A TGS +E+ A A ILCGASL R
Sbjct: 493 SCWSLVMKGSPLTPSLTNSLITTPASSLAEIEKMYEVATTGSEDEKIAVASILCGASLFR 552
Query: 616 GWNIQEHVVRFVVKLLSPPIPPGYTGPRSHLVDHMPMLTAIFFGASSVDTVHILSLHGLV 675
GW+IQEHV+ F+V LLSPP P +G SHL++ P L + G S +D VHI SLHG+V
Sbjct: 553 GWSIQEHVIIFIVTLLSPPAPADLSGSYSHLINSAPFLNVLLVGISPIDCVHIFSLHGVV 612
Query: 676 PDVVASLMPLCEVFGSLVPTXXXXXXTGDEPSVYMVFSCAFLFLVRLWKFYRSPHE-LCX 734
P + +LMP+CE FGS VP TG+ S + VFS AF L+RLW+F P + +
Sbjct: 613 PLLAGALMPICEAFGSGVPNITWTLPTGELISSHAVFSTAFTLLLRLWRFDHPPLDYVLG 672
Query: 735 XXXXXXXXXXXXXXXXXHNSHIASRTSAAQSER-NSNLDQLDTVSDDPIYIDHFPKLRAW 793
N + + + ++ +S DPI++D FP+L+ W
Sbjct: 673 DVPPVGPQPSPEYLLLVRNCRLECFGKSPKDRMARRRFSKVIDISVDPIFMDSFPRLKQW 732
Query: 794 YCQNKTCIASTLSGLCSGNPVHQVANKILSMIYSKMTKTGXXXXXXXXXXXXXXXXXXXC 853
Y Q++ C+AS LS L +G+PVH + + +LSM++ K K G
Sbjct: 733 YRQHQECMASILSELKTGSPVHHIVDSLLSMMFKKANKGGSQSLTPSSGSSSLSTSG--- 789
Query: 854 TGEDAYQRPMLPAWEVLEAIPFVLEAILSACAYGRLSSRDLITGLRELVDFLPASIATII 913
G+D+ + LPAW++LEA PFVL+A L+ACA+G LS R+L TGL+ L DFLPA++ T++
Sbjct: 790 -GDDSSDQLKLPAWDILEAAPFVLDAALTACAHGSLSPRELATGLKILADFLPATLGTMV 848
Query: 914 SYFSAEISRGIWKAVPMNGTDWPSPAPMLPSIESEIKEILAAVGVSVPCCSA-GXXXXXX 972
SYFS+E++RG+WK V MNGTDWPSPA L S+E +I++ILAA GV VP A G
Sbjct: 849 SYFSSEVTRGLWKPVSMNGTDWPSPAANLASVEQQIEKILAATGVDVPRLPADGISAATL 908
Query: 973 XXXXXXXXXXXITFKLTKSLDYIHAVIGPALENCAAGCSWPCIPIIGSLWAQKVRRWHDF 1032
IT+KL K+ + ++GPAL++ AA C WPC+PI+ SLW QKV+RW DF
Sbjct: 909 PLPLAALVSLTITYKLDKATERFLVLVGPALDSLAAACPWPCMPIVTSLWTQKVKRWSDF 968
Query: 1033 IVVSCSRSVFWKNQEAVSQLLRSCFTSFLGSLHVSSLLTNQSSVNNLLGSVVAAR--AVC 1090
++ S SR+VF N++AV QLLRSCFT LG L +S L + V LLG +R
Sbjct: 969 LIFSASRTVFHHNRDAVIQLLRSCFTCTLG-LTPTSQLCSYGGVGALLGHGFGSRYSGGI 1027
Query: 1091 PSLAPGYLYLRSCRTIHNVQHVNDVIVGLVXXXXXXXXXXXX-SSDLPRLKSS------- 1142
+ APG LY++ R+I +V + + I+ L+ + +LK +
Sbjct: 1028 STAAPGILYIKVHRSIRDVMFLTEEILSLLMFSVKSIATRELPAGQAEKLKKTKDGSRYG 1087
Query: 1143 --QASLSLATSKAREVASLGASLLCATAGLQVVQELYRETIPTWLLSSRDEKLGKVSAVA 1200
Q SLSLA + + ASLGASL+ + GL +VQ L +ET+P+W +S E+ ++ +
Sbjct: 1088 IGQVSLSLAMRRVKLAASLGASLVWISGGLNLVQALIKETLPSWFISVHGEE-DELGGMV 1146
Query: 1201 HIMEGYAMAYMWVLSGGLIWGFEAKMPSWAVSRRRYLIGTHFEYLSRALEGNIKLGCDPA 1260
++ GYA+AY +LS WG ++ P A RR ++ H E++ ALEG I LGCD A
Sbjct: 1147 PMLRGYALAYFAILSSAFAWGVDSSYP--ASKRRPRVLWLHLEFMVSALEGKISLGCDWA 1204
Query: 1261 TWRAYVSCLVGLVVSSAPAWIQEVRPETLRKLASGLRGWHECELALSLLERGGIGSIPSV 1320
TW+AYV+ V L+V PAW+ EV E +++L+ LR W+E +LAL+LL GG+G++ +
Sbjct: 1205 TWQAYVTGFVSLMVQCTPAWVLEVDVEVIKRLSKSLRQWNEQDLALALLCAGGLGTMGAA 1264
Query: 1321 MELL 1324
EL+
Sbjct: 1265 TELI 1268
Score = 296 (109.3 bits), Expect = 1.6e-218, Sum P(4) = 1.6e-218
Identities = 70/235 (29%), Positives = 128/235 (54%)
Query: 23 ERVIETAKRCQQRHDSPVMWAVEMTRCLKSGSGSVV--ELGEVLVSYLCFQNNHPSLWKF 80
E V + Q+++ P+ WA+++ L S S+ +L + LV+++ ++N+ P WK
Sbjct: 12 ESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSWKL 71
Query: 81 LDYALTSNLLSPIHILSLLTSRVIPHRRSQPQAFRLYLELLSRYALNFHAVASEDCNVKI 140
L+ A++ N++ P+ +L+LL+ RVIP+R+ P A+RLY+ELL R+A +F + K
Sbjct: 72 LEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAPGYHKT 131
Query: 141 IESIEACLQLSRTYNVRVVEFGHALVLSFFDLVVRLIDSLFEDMGL--------QVGPLD 192
+ SI+ L LS T+ V+ E G L+ F +V L+D+ ++ GL P
Sbjct: 132 MNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRSKWPSS 191
Query: 193 QQSMEIDSIGNFCVGNNEHFEQIRRKNSLLVIEVLNKLMDSSKAMVLLRLIHFNM 247
M++D + N V NE+ + + + N+ + IE++ + + + +L L NM
Sbjct: 192 PHDMDLDGLEN-SVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNM 245
Score = 149 (57.5 bits), Expect = 1.6e-218, Sum P(4) = 1.6e-218
Identities = 35/98 (35%), Positives = 58/98 (59%)
Query: 374 WLSALRLVQRERDPPEGPLPHLEARLGILLSIVPLAIANVLAEQANIQLSTLQGSKTSGS 433
++ L ++ ERDP EGP+P + L +LLS+ PLA+AN++ E+ + + +TS S
Sbjct: 341 FMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTPLAVANIIEEEESQWID-----QTSSS 395
Query: 434 IETGCGHGMEEKSLASKKEGLVSSLQALGNFSALLCPP 471
E+K ++GL++SLQ LG++ +LL PP
Sbjct: 396 PSN---QWKEKKGKC--RQGLINSLQQLGDYESLLTPP 428
Score = 127 (49.8 bits), Expect = 1.6e-218, Sum P(4) = 1.6e-218
Identities = 26/55 (47%), Positives = 30/55 (54%)
Query: 330 DIFMENSMDGKQLPVTSAXXXXXXXXXXXXXXNRASWQETFLALWLSALRLVQRE 384
D+F E+ MDG Q SA N SW + FLALWL+ALRLVQRE
Sbjct: 278 DLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSWHDAFLALWLAALRLVQRE 332
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1328 1206 0.00097 123 3 11 22 0.36 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 633 (67 KB)
Total size of DFA: 547 KB (2248 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 89.79u 0.18s 89.97t Elapsed: 00:00:04
Total cpu time: 89.79u 0.18s 89.97t Elapsed: 00:00:04
Start: Tue May 21 03:33:56 2013 End: Tue May 21 03:34:00 2013