Your job contains 1 sequence.
>000733
MATPTRIEIEEEIEGGRIESNDFFFDEIGESIPIIRDDDSQFDLQNPPSLPLAVSQLSHQ
LIFAAHSSGFCVARTNDVIDAAKEMKENGTRCCVQELSVVDVPFENENVDILSLSNDEST
LAVSLYQSPHIHFFSVHSLLNKEIKPSFSCSLNGSTYVKDIRWRKKPENSFLALSNVGRL
YRGGVNGPLEDVMDNVDAVEWSVKGKFVAVAKKNVLSILTSKLKERLPISLSFKSWVGDC
DVNCSVKVDSIRWVRRDCIIIGCFQLTEDGKEENYLVQVIQSKDGKITDASSEPVVLSFS
DVFSDVIDDILPSGTGPYLFLTYVERWGLAISANRKNIDDHVVLLRWSLDDEKNDIAVVD
INRDKWIPRIKLQDNGNDNLIMGLCIDKVSLCGKVKVQLGVEEKELSPYFILMCLTLDGK
LNMFHVASVSGPSCSPDVDFTLSDAEDDVPAVVPVDSNLPRVYSGSGLQKIEPVASSFKS
QGVKLKELDTDDTCGVTAKSNLKGFDKYESSTSISISNSQELENKDRQQIQNSLQKSTNL
VQSPPKASLPEVTSFGVRDSSKTGTQDTGGFGLGSTGFVGKFPTDTPSLSSHKDLLKSLE
FGKEAQGNFGSAGLQSLSSQSQSCGNFISSEDSRVKLPVLPSSHSHEKTYENSSLGAPNV
SGSFVGKPLSSKDATGSLTPVFSAKPVHGDGDRASTGAGKIESLPSVRSSQFSLPQNFAS
GKSHNQKLYPSKDDYKTATLSGLPNSEPNLSKQSGNIKEMTKELDMLLQSIEETGGFRDA
CTVFQRQKVEELEEGIGSLSEKCGMWRSIMDERLQEIQNLFDKTVQVLARKIYTEGIVKQ
ASDSRYWDLWNRQKLSPELELKRGHILSINQDLINQLIELERHFNSLELNKFGENDGVHG
CQRRPQSRFGTSRHIQSLHSLHTTMSSQIAAAEQLSDRLSKQMALLSIESPVKQQNVKKE
LFETLGIPYDASFSSPDVTKVMDQSSIKKLIHSSGSAAANDQSRRRQSSAMKSYDPETAR
RRRDSLDRSWASFEPPKTTVKRMLLQDHQKCSQVKSSLKDKQQISPHMLEGAAIVRPKDR
TTPSTSWNPLRIKGLQDASLKQTSESQSTLFKWAGDPTGPSQMTGLKSPVFQSNIASTRS
SLSATQLSPMGWQNHARNTGDVTAEKLSSGVYFDVKSNSTLTNETKSTMQSESNIFQKPT
ISTMSPTLTPSLLKNPSEMPISNGKGTVPESSTIGSEKHGAATTKTLFVESGKNRDAQVS
TPAAVPTSSAFPGIVPIFDAANKSQPGGKSFTPSTFSLSLSASSSPMEEFQVDWHLEARL
ISQA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000733
(1324 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:1095411 - symbol:Nup214 "nucleoporin 214" species... 99 2.1e-11 5
UNIPROTKB|F1MH31 - symbol:NUP214 "Uncharacterized protein... 107 4.4e-08 5
UNIPROTKB|F1S0W9 - symbol:NUP214 "Uncharacterized protein... 102 2.0e-07 4
UNIPROTKB|P35658 - symbol:NUP214 "Nuclear pore complex pr... 97 1.6e-06 4
CGD|CAL0006203 - symbol:orf19.4906 species:5476 "Candida ... 150 1.6e-06 1
UNIPROTKB|Q5APQ2 - symbol:CaO19.4906 "Putative uncharacte... 150 1.6e-06 1
RGD|1304977 - symbol:Nup214 "nucleoporin 214" species:101... 99 3.6e-06 4
POMBASE|SPBC215.13 - symbol:SPBC215.13 "sequence orphan" ... 139 1.4e-05 1
WB|WBGene00013498 - symbol:Y70G10A.2 species:6239 "Caenor... 153 8.2e-05 2
FB|FBgn0036203 - symbol:Muc68D "Mucin 68D" species:7227 "... 147 0.00036 2
>MGI|MGI:1095411 [details] [associations]
symbol:Nup214 "nucleoporin 214" species:10090 "Mus musculus"
[GO:0005487 "nucleocytoplasmic transporter activity" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=TAS] [GO:0006406 "mRNA export from nucleus" evidence=IMP]
[GO:0006606 "protein import into nucleus" evidence=IMP] [GO:0006611
"protein export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0051028 "mRNA transport" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IMP] InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 SMART:SM00320 MGI:MGI:1095411 Gene3D:2.130.10.10
GO:GO:0005643 GO:GO:0051726 GO:GO:0006606 eggNOG:NOG12793
GO:GO:0006406 GO:GO:0006611 EMBL:AL928893 InterPro:IPR026054
PANTHER:PTHR23193 GO:GO:0005487 GeneTree:ENSGT00700000104281
CTD:8021 KO:K14317 HOVERGEN:HBG052683 OMA:FGQSPGF OrthoDB:EOG41G33J
ChiTaRS:NUP214 EMBL:AK122189 IPI:IPI00229722 RefSeq:NP_758472.2
UniGene:Mm.289686 ProteinModelPortal:Q80U93 SMR:Q80U93
IntAct:Q80U93 STRING:Q80U93 PhosphoSite:Q80U93 PaxDb:Q80U93
PRIDE:Q80U93 Ensembl:ENSMUST00000065398 GeneID:227720
KEGG:mmu:227720 UCSC:uc008jeh.1 HOGENOM:HOG000113878
InParanoid:Q80U93 NextBio:378784 Bgee:Q80U93 Genevestigator:Q80U93
Uniprot:Q80U93
Length = 2085
Score = 99 (39.9 bits), Expect = 2.1e-11, Sum P(5) = 2.1e-11
Identities = 31/109 (28%), Positives = 59/109 (54%)
Query: 318 YLFLTYVERWGLAISANRKNIDDHVVLLRWSLDDEKNDIAVVDINRDKWIPRIKLQDNGN 377
+ +L+Y+E W L ++A+ + + + L R + + D +R + +P + D +
Sbjct: 304 HYYLSYIEEWDLVLAASAASTEVSI-LARQNDQTNWESWLLEDSSRAE-LP---VTDKSD 358
Query: 378 DNLIMGLCIDKVSLCGKVKVQLGVEEKELSPYFILMCLTLDGKLNMFHV 426
D+L MG+ ID + +V+V + EEK L P +L+ L+ DG L F++
Sbjct: 359 DSLPMGVAIDYTN---EVEVTIN-EEKTLPPAPVLLLLSTDGVLCPFYM 403
Score = 98 (39.6 bits), Expect = 2.1e-11, Sum P(5) = 2.1e-11
Identities = 66/285 (23%), Positives = 116/285 (40%)
Query: 1018 TARRRRDSLDRSWASFEPPKTTVKRMLLQDHQKCSQVKSSLKDKQQISPHM--LEGAAIV 1075
TA DS S PP+TTV + S++ L + G +
Sbjct: 1293 TAASLEDSAPSSSKPAAPPETTVSSASSKLETPPSKLGELLFPSSLAGETLGSFSGLRVG 1352
Query: 1076 RPKDRTTPSTSWNPLRIKGLQDASLKQTSESQSTLFKWAGDPTGPSQMTGLKS-PVFQSN 1134
+ +D T P + + + G Q A S +++ +P S ++ + P N
Sbjct: 1353 QAEDSTKPVSKASSTNLAGAQPAKPSGVSFPNTSVLGKPVEPAVTSSVSPAPAAPASALN 1412
Query: 1135 IASTRSSLSATQLSPMGWQNHARNTGDVT---AEKLSSGVYFDVKSNSTLTNETKSTMQS 1191
++++ SS + P+ A G ++ A SS F + T ++ S +
Sbjct: 1413 VSTSSSSATVFGSVPL---TSAGPPGLISFGGAALASSKASFSFGNQQTSSSTASSATPT 1469
Query: 1192 ESNIFQKPTISTMSPTLT-PSLLKNPS--EMPISNGKGT-------VPESSTIGSEKHGA 1241
+++ P++ PTL+ LL +PS +P+S+GK T VP+ S SE +
Sbjct: 1470 STSV--APSLPASFPTLSFGGLLSSPSASSLPVSSGKSTEEAAPPAVPDKSD-SSEV--S 1524
Query: 1242 ATTKTLFVESGKNRDAQVSTPAAVPTSSAFPGIVPIFDAANKSQP 1286
ATT +L V+ + Q S + P P +V D++ S+P
Sbjct: 1525 ATTPSLPVQP---QSTQASLQTSDPVKKE-PVLVQTTDSS-PSRP 1564
Score = 94 (38.1 bits), Expect = 2.1e-11, Sum P(5) = 2.1e-11
Identities = 58/217 (26%), Positives = 96/217 (44%)
Query: 35 IRDDDSQFDLQNPPSLPLAVSQLSHQLIFAAHSSGFCVARTNDVIDAAKEMKENGTRCCV 94
+R DS +L S L +S + ++FA ++G V T ++ K + V
Sbjct: 25 VRIFDSPEELPKERSSVLTISN-KYGMLFAGGTNGLNVFPTKSLLIQNKPGDDPNK--IV 81
Query: 95 QELSVVDVPFENENVDILSLSNDESTLAVSLYQSPH---IHFFSVHSLLN--KEIKPSFS 149
+ ++VP + V L+LS D TL+ + S + I FF V + N K +K F+
Sbjct: 82 DTIQGLNVPMKFP-VHHLALSCDSLTLSACMMSSEYGSIIAFFDVRTFSNQAKPLKRPFT 140
Query: 150 ---CSLNGSTYVKDIRWRKKPENSF---LALSNVGRLYRGGVNGPLEDVMDN--VDAVEW 201
S + S V D++W + LA ++ L V + + V V W
Sbjct: 141 YHKVSNDASGMVNDMKWNPTVPSMVAVCLADGSISVLQVTDVVKVCATLPPSTGVTCVCW 200
Query: 202 SVKGKFVAVAKKN--VLSIL-TSKLKERLPISLSFKS 235
S KGK +AV K+N V+ L T + K+ +P ++S
Sbjct: 201 SPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYES 237
Score = 69 (29.3 bits), Expect = 6.8e-07, Sum P(5) = 6.8e-07
Identities = 72/316 (22%), Positives = 116/316 (36%)
Query: 976 PDVTKVMDQSSIKKLIHSSGSAAANDQSRRRQSSAMKSYDPETARRRRDSLDR--SWASF 1033
P V D S + S + Q+ + S +K +P + S R S ASF
Sbjct: 1512 PAVPDKSDSSEVSATTPSLPVQPQSTQASLQTSDPVKK-EPVLVQTTDSSPSRPASSASF 1570
Query: 1034 EPPKTTVKRMLLQDHQKCSQVK--SSLKDKQQ--ISPHMLEGAAIVRPKDRTTPSTSW-N 1088
++ L K V S+ Q ++ +L GA + TP+TS +
Sbjct: 1571 VASTESMPVTLGAPDSKIEAVSPASTFAGPGQAAVATAVLPGAGSAATEASGTPTTSTVS 1630
Query: 1089 PLRIKGLQDASLKQTSESQSTLFKWAGDPTGPSQMTGLKS---------PVFQSNIASTR 1139
+ ++ T+ S S++F + S + L S PVF AS
Sbjct: 1631 SSSPTSATETAVFGTATSGSSVFTQPPAASSSSAFSQLSSNTATAPSATPVFGQVAASIT 1690
Query: 1140 SSLSAT-QLSPMGWQNHARNTGDVTAEKLSSGVYFDVKSNSTLTNETKSTMQSESNIFQK 1198
S+ +AT Q S G+ + A + GV+ T ++ + F +
Sbjct: 1691 STAAATPQASSSGFGSPAFGAS-------APGVFGQTAFGQTPAFGQATSSPASGFSFSQ 1743
Query: 1199 PTISTMSPTLTPSLLKNPSEMPISNGKGTVPESSTIGSEKHGAATTKTLFVESGKNRD-A 1257
P S++ P S+ P+ +N G +S+ GS G A+T T G+N A
Sbjct: 1744 PGFSSV-PAFGQSVSSTPASTS-ANVFGATSSTSSPGSFSFGQASTNTGGTLFGQNNPPA 1801
Query: 1258 QVSTPAAVPTSSAFPG 1273
+P SS F G
Sbjct: 1802 FGQSPGFGQGSSVFGG 1817
Score = 61 (26.5 bits), Expect = 7.9e-07, Sum P(4) = 7.9e-07
Identities = 32/116 (27%), Positives = 45/116 (38%)
Query: 1179 STLTNETKSTMQSESNIFQ-----KPTISTMSPTLTPSLLKNPSEM--PISNGKGTVPES 1231
STLT T T+ N+ + P + M + S K P + P++N + +
Sbjct: 1115 STLTESTLKTVPQVVNVQELRSNPSPPSAAMGSAVQHSAAKTPHAVLTPVANSQAK--QG 1172
Query: 1232 STIGSEKHGAATTKTLFVESG---------KNRDAQVSTPAAV-----PTSSAFPG 1273
S I S K T + + SG K A STP+A P S A PG
Sbjct: 1173 SLINSFKPSGPTAASCQLSSGDKAVGQGTAKTESAATSTPSAAGQLNKPFSFASPG 1228
Score = 60 (26.2 bits), Expect = 9.4e-08, Sum P(5) = 9.4e-08
Identities = 44/182 (24%), Positives = 71/182 (39%)
Query: 1098 ASLKQTSESQSTLFKWAGDPTGP----SQMTGLKSPVFQSNIASTRSSLSATQLSPMGWQ 1153
AS S +ST + A P P S +P ST++SL + P+ +
Sbjct: 1495 ASSLPVSSGKST--EEAAPPAVPDKSDSSEVSATTPSLPVQPQSTQASLQTSD--PVKKE 1550
Query: 1154 NHARNTGDVTAEKLSSGVYFDVKSNS---TL-TNETKSTMQSESNIFQKPTISTMSPTLT 1209
T D + + +S F + S TL ++K S ++ F P + ++ +
Sbjct: 1551 PVLVQTTDSSPSRPASSASFVASTESMPVTLGAPDSKIEAVSPASTFAGPGQAAVATAVL 1610
Query: 1210 PSLLKNPSEMPISNGKGTVPESSTIGSEKHGAATTKTLFVESGKNRDAQVSTPAAVPTSS 1269
P +E GT P +ST+ S +AT +F + PAA +SS
Sbjct: 1611 PGAGSAATE-----ASGT-PTTSTVSSSSPTSATETAVFGTATSGSSVFTQPPAA-SSSS 1663
Query: 1270 AF 1271
AF
Sbjct: 1664 AF 1665
Score = 59 (25.8 bits), Expect = 2.1e-11, Sum P(5) = 2.1e-11
Identities = 37/112 (33%), Positives = 47/112 (41%)
Query: 641 PSSHSHEKTYEN-SSLGA--PNVSGSFVGKPLSSKDATGSL-TPVFSAKPVHGDGDRAST 696
P S KT E S+ G P SGSF G P SS A +L P ++ P+ S
Sbjct: 408 PGVRSLIKTLELISTEGERQPKSSGSFPGTP-SSPQAPQNLDAPATASSPL----PPVSA 462
Query: 697 GAGKIESLPSVRSSQ--FSL-PQNFASGKSHNQK--LYPS-KDDYKTATLSG 742
+PS S FS P +F S S + LYP+ D + A SG
Sbjct: 463 APTSTFPMPSAAGSPSVFSFGPSSFKSSASVTGEPPLYPTGSDSSRAAPGSG 514
Score = 58 (25.5 bits), Expect = 2.6e-11, Sum P(5) = 2.6e-11
Identities = 35/136 (25%), Positives = 51/136 (37%)
Query: 626 NFISSEDSRVKLPVLPSSHSHEKTYENSSLG----APNVSGSFVGKPLSSKDATGSLTPV 681
+F SS + P+ P+ + S AP GS P + AT +
Sbjct: 486 SFKSSASVTGEPPLYPTGSDSSRAAPGSGTSTFSFAPPSKGSLASTPAVAPVATSAAPFT 545
Query: 682 FSAKPVHGDGDRAST-GAGKIESLP-SVRSSQFSLPQNF----ASGKSHNQKLYPSKDDY 735
F KP +ST G S P S S + +L + F +S H+ PS +
Sbjct: 546 FGFKPTLESTPMSSTPNTGMKPSFPPSASSVKVNLNEKFTAVASSAPVHSSTSTPSVLPF 605
Query: 736 KTA---TLSGLPNSEP 748
++ T SG P S P
Sbjct: 606 SSSPKPTASG-PLSHP 620
Score = 57 (25.1 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 26/114 (22%), Positives = 38/114 (33%)
Query: 609 FGSAGXXXXXXXXXXCGNFISSEDSRVKLPVLPSSHSHEKTYENSSLGAPNVSGSFVGKP 668
F SAG N + ++ SS +K S G +V+ G
Sbjct: 1898 FSSAGGGFGSTAAPNTSNLFGNSGAKTFGGFGSSSFGEQKPAGTFSSGGGSVASQGFGFS 1957
Query: 669 LSSKDATGSLTPVFSAKPVHGDGDRASTGAGKIESLPSVRSSQFSLPQNFASGK 722
+K PVF + P G S G G + + S + F+ P GK
Sbjct: 1958 TPNKTGGFGAAPVFGSPPTFG----GSPGFGGVPAFGSAPA--FTSPLGSTGGK 2005
Score = 55 (24.4 bits), Expect = 2.1e-11, Sum P(5) = 2.1e-11
Identities = 28/99 (28%), Positives = 43/99 (43%)
Query: 922 HTTMSSQIAAAEQLSDRLSKQMALLSI--ESPVKQ--QNVKKELFETLGIPYDASFSSPD 977
HT + Q AAA L +++ Q +S ES +K Q V + + P A+ S
Sbjct: 1090 HTVAAPQAAAAAALRRQMASQAPAMSTLTESTLKTVPQVVNVQELRSNPSPPSAAMGSAV 1149
Query: 978 VTKVMDQSSIKKLIHSSGSAAANDQSRRRQSSAMKSYDP 1016
Q S K H+ + AN Q++ Q S + S+ P
Sbjct: 1150 ------QHSAAKTPHAVLTPVANSQAK--QGSLINSFKP 1180
Score = 53 (23.7 bits), Expect = 8.2e-11, Sum P(5) = 8.2e-11
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 642 SSHSHEKTYENSSLGAPNVSGSFVGKPLSSKDATGSLTPVFSAKPVHGD 690
S+ ++ YE+ G+ S S V +PL +DA + T V A+P+ G+
Sbjct: 960 SAFLSQRYYEDLDEGS---SASSVAQPLEGEDARPTCTSV--AQPLEGE 1003
Score = 51 (23.0 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 43/204 (21%), Positives = 87/204 (42%)
Query: 1092 IKGLQDASLKQTSESQSTLFKWAGDPTGPSQMTGLKSPVFQSN-IASTRSSLSATQLSPM 1150
IK L+ S + + +S+ + G P+ P L +P S+ + ++ ++T P
Sbjct: 414 IKTLELISTEGERQPKSS-GSFPGTPSSPQAPQNLDAPATASSPLPPVSAAPTSTFPMPS 472
Query: 1151 GWQNHARNTGDVTAEKLSSGVYFDVKSNSTLTNETKSTMQSESNIFQKPTISTMSPTLTP 1210
+ + + ++ K S+ V + T ++ +++ S ++ F S S TP
Sbjct: 473 AAGSPSVFSFGPSSFKSSASVTGEPPLYPTGSDSSRAAPGSGTSTFSFAPPSKGSLASTP 532
Query: 1211 SLLK-NPSEMPISNG-KGTV---PESSTIGSEKHGAATTKTLFVESGKNRD-AQVSTPAA 1264
++ S P + G K T+ P SST + + V+ N V++ A
Sbjct: 533 AVAPVATSAAPFTFGFKPTLESTPMSSTPNTGMKPSFPPSASSVKVNLNEKFTAVASSAP 592
Query: 1265 VPTSSAFPGIVPIFDAANKSQPGG 1288
V +S++ P ++P F ++ K G
Sbjct: 593 VHSSTSTPSVLP-FSSSPKPTASG 615
Score = 49 (22.3 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 24/119 (20%), Positives = 34/119 (28%)
Query: 625 GNFISSEDSRVKLPVLPSSHSHEKTYENSSLGAPNVSGSFVGKPLSSKDATGSLTPVFSA 684
G F SS K SS + PN +G F P+ T +P F
Sbjct: 1926 GGFGSSSFGEQKPAGTFSSGGGSVASQGFGFSTPNKTGGFGAAPVFGSPPTFGGSPGFGG 1985
Query: 685 KPVHGDGDRASTGAGKIESLPSVRSSQFSLPQNFASGKSHNQKLYPSKDDYKTATLSGL 743
P G ++ G + + F G S N + + T L
Sbjct: 1986 VPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFGFGSSGNTASFGTLASQNAPTFGSL 2044
Score = 47 (21.6 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 34/135 (25%), Positives = 47/135 (34%)
Query: 601 FGKEAQGN---FGSAGXXXXXXXXXXCGNFISSEDSRVKLPVLPSSHSHEKTYENSSLGA 657
FG+ A G FG A F S + P+S S SS +
Sbjct: 1717 FGQTAFGQTPAFGQATSSPASGFSFSQPGFSSVPAFGQSVSSTPASTSANVFGATSSTSS 1776
Query: 658 PNVSGSFVGKPLSSKDAT--GSLTP-VFSAKPVHGDGDRASTGAGKIESLPSVRSSQFSL 714
P S SF G+ ++ T G P F P G G +S G + + S FS
Sbjct: 1777 PG-SFSF-GQASTNTGGTLFGQNNPPAFGQSPGFGQG--SSVFGGTSATTSTAAPSGFSF 1832
Query: 715 PQNFASGKSHNQKLY 729
Q G S+ ++
Sbjct: 1833 CQASGFGSSNTGSVF 1847
Score = 43 (20.2 bits), Expect = 6.8e-07, Sum P(5) = 6.8e-07
Identities = 19/79 (24%), Positives = 36/79 (45%)
Query: 683 SAKPVHGDGDRASTGAGKIESLPSVRSSQFSLPQNFAS---GKSHNQKLYPSKDDYKT-- 737
S+KP S+ + K+E+ PS + + P + A G ++ ++D K
Sbjct: 1304 SSKPAAPPETTVSSASSKLETPPS-KLGELLFPSSLAGETLGSFSGLRVGQAEDSTKPVS 1362
Query: 738 -ATLSGLPNSEPNLSKQSG 755
A+ + L ++P +K SG
Sbjct: 1363 KASSTNLAGAQP--AKPSG 1379
Score = 41 (19.5 bits), Expect = 6.0e-06, Sum P(5) = 6.0e-06
Identities = 26/95 (27%), Positives = 36/95 (37%)
Query: 1199 PTISTMSPTLTPSLLKNPSEMPISNGKG--TVP----ESSTIGSEKHGAATTKTLFVESG 1252
PT ST+S + S + ++G T P SS AT + G
Sbjct: 1624 PTTSTVSSSSPTSATETAVFGTATSGSSVFTQPPAASSSSAFSQLSSNTATAPSATPVFG 1683
Query: 1253 KNRDAQVSTPAAVPTSSAFPGIVPIFDAANKSQPG 1287
+ + ST AA P +S+ P F A S PG
Sbjct: 1684 QVAASITSTAAATPQASSSGFGSPAFGA---SAPG 1715
>UNIPROTKB|F1MH31 [details] [associations]
symbol:NUP214 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0006611 "protein export from nucleus" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=IEA] [GO:0005487 "nucleocytoplasmic
transporter activity" evidence=IEA] InterPro:IPR001680
InterPro:IPR015943 SMART:SM00320 Gene3D:2.130.10.10 GO:GO:0051726
GO:GO:0006606 GO:GO:0006406 GO:GO:0006611 InterPro:IPR026054
PANTHER:PTHR23193 GO:GO:0005487 GeneTree:ENSGT00700000104281
OMA:FGQSPGF EMBL:DAAA02032255 IPI:IPI00701791
Ensembl:ENSBTAT00000029190 Uniprot:F1MH31
Length = 2074
Score = 107 (42.7 bits), Expect = 4.4e-08, Sum P(5) = 4.4e-08
Identities = 32/107 (29%), Positives = 59/107 (55%)
Query: 320 FLTYVERWGLAISANRKNIDDHVVLLRWSLDDEKNDIAVVDINRDKWIPRIKLQDNGNDN 379
+L+Y+E W L ++A+ + + + L R S + + D +R + +P + D +D+
Sbjct: 291 YLSYIEEWDLVLAASAASTEVSI-LARQSSQNSWESWLLEDSSRAE-LP---VTDKSDDS 345
Query: 380 LIMGLCIDKVSLCGKVKVQLGVEEKELSPYFILMCLTLDGKLNMFHV 426
L MG+ ID + +V++ + EEK L P +LM L+ DG L F++
Sbjct: 346 LPMGVAIDYTN---QVEITI-TEEKTLPPAPVLMLLSTDGVLCPFYM 388
Score = 90 (36.7 bits), Expect = 4.4e-08, Sum P(5) = 4.4e-08
Identities = 59/211 (27%), Positives = 95/211 (45%)
Query: 35 IRDDDSQFDLQNPPSLPLAVSQLSHQLIFAAHSSGFCVARTNDVIDAAKEMKENGTRCCV 94
+R DS +L S L+VS + L+FA +SG V T +++ K + V
Sbjct: 10 VRIFDSPEELPKERSSLLSVSN-KYGLVFAGGASGLHVFSTKNLLIQNKPGDDPNK--IV 66
Query: 95 QELSVVDVPFENENVDILSLSNDESTLAVSLYQSPH---IHFFSVHSLLN--KEIKPSFS 149
++ + VP + + L+LS D TL+V + S + I FF V + N K+ K F+
Sbjct: 67 DKVQSLLVPMKFP-IHHLALSCDNLTLSVCMMSSEYGSIIAFFDVRTFSNEAKQQKRPFA 125
Query: 150 CSL---NGSTYVKDIRWRKKPENSF---LALSNVGRLY---RGGVNGPLEDVMDNVDAVE 200
+ V D++W + LA ++ L V L + V +V
Sbjct: 126 YHKLLKDAGGLVIDMKWNPAVSSMVAVCLADGSIAVLQVTETVKVCATLPSTV-GVTSVC 184
Query: 201 WSVKGKFVAVAKKN--VLSIL-TSKLKERLP 228
WS KGK +AV K+N V+ L T + K+ +P
Sbjct: 185 WSPKGKQLAVGKQNGTVVQYLPTLQEKKVIP 215
Score = 75 (31.5 bits), Expect = 4.4e-08, Sum P(5) = 4.4e-08
Identities = 38/149 (25%), Positives = 65/149 (43%)
Query: 1115 GDPTGPSQMTGLKSPVFQSNIASTRSSLSATQLSPMGWQNHARNTGDVTAEKLSSGVYFD 1174
G P P + T +P ++ + + SS P+ A ++G ++ G++F
Sbjct: 1367 GKPAEPPESTSAAAPTAAASPSPSSSSTGVFGNLPL---TSAGSSGAISF----GGLFFS 1419
Query: 1175 -VKSNSTLTNETKSTMQSESNIFQKPTISTMSPTLTPSLLKNPSEMPISNGKG-TVPESS 1232
K++ + + S+ S P+ +T PT P+L P P+S+G T+P S
Sbjct: 1420 GSKTSFSFGGQPASSTAPSST---PPSTATPLPTSLPTL---PFGSPLSSGSAPTLPTGS 1473
Query: 1233 TIGSEKHGAATTKTLFVESGKNRDAQVST 1261
SE AA + L + G N +A ST
Sbjct: 1474 GKSSE---AAASSALPEKPGSN-EASAST 1498
Score = 61 (26.5 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
Identities = 31/156 (19%), Positives = 42/156 (26%)
Query: 605 AQGNFGSAGXXXXX-----XXXXXCGNFISSEDSRVKLPVLPSSHSHEKTYENSSLGAPN 659
A G FGS G F SS K SS + PN
Sbjct: 1890 ASGGFGSTATPNTSNLFGNSGAKTFGGFASSSFGDQKPAGTFSSGGGSVASQGFGFSTPN 1949
Query: 660 VSGSFVGKPLSSKDATGSLTPVFSAKPVHGDGDRASTGAGKIESLPSVRSSQFSLPQNFA 719
+G F P+ T +P F P G ++ G + + F
Sbjct: 1950 KTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFG 2009
Query: 720 SGKSHNQKLYPSKDDYKTATLSGLPNSEPNLSKQSG 755
G S + + + T L QSG
Sbjct: 2010 FGSSSSTTSFGTLASQNAPTFGSLSQQSSGFGSQSG 2045
Score = 59 (25.8 bits), Expect = 4.4e-08, Sum P(5) = 4.4e-08
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 691 GDRASTG-AGKIES-LPSVRSS--QFSLPQNFASGKSHNQKLY-PSKDDYKTATLSGLP 744
GD+AS A KIE+ + S S+ QFS P +F+SG N + P+ TAT P
Sbjct: 1165 GDKASGPVATKIETAVTSTPSTVGQFSKPFSFSSGTGFNFGIVTPTPSSNFTATQGSAP 1223
Score = 59 (25.8 bits), Expect = 4.4e-08, Sum P(5) = 4.4e-08
Identities = 19/70 (27%), Positives = 31/70 (44%)
Query: 650 YENSSLGAPNVSGSFVGKPLSSKDATGSLTPVFSAKPVHGDGDRASTGAGKIESLPSVRS 709
YE P+ +G+ + AT + S++P G ST AGK+E+ PS +
Sbjct: 1244 YETVPESLPS-TGTMTSGSTGAAGATPGESAPSSSRPAAPSGISLSTPAGKLEAPPS-KL 1301
Query: 710 SQFSLPQNFA 719
+ P + A
Sbjct: 1302 GELLFPSSLA 1311
Score = 57 (25.1 bits), Expect = 1.5e-06, Sum P(5) = 1.5e-06
Identities = 44/216 (20%), Positives = 90/216 (41%)
Query: 1024 DSLDRSWASFEPPKTTVKRMLLQDHQKCSQVKSSLKD--KQQISP--HMLEGAAIVR--- 1076
D LD W K KR+L+ + + ++ ++ QQ H+++ +R
Sbjct: 809 DVLDLEWDRHLEQKKKQKRLLVPERETLFNTLANNREIINQQRKRLNHLVDSLQQLRLYN 868
Query: 1077 -------PKDRTTPSTSWN-PLRIKGLQDASLKQTSESQSTLFKWAGDPTGPSQMTGLKS 1128
P D + ST+ + ++ L++A LK T E+ P + L++
Sbjct: 869 QTSQWSLPLDVPSQSTTHSFDSDLESLRNALLKTTLEAHPKPLPKVPAKLSPVKQAQLRN 928
Query: 1129 PVFQSNIASTRSSLSATQLSPMGWQNHARNTGDVTAEKLSSGVYFDVKSNSTLTNETKST 1188
+ + RS+ A+ LS + + R D+ +S + S S + +T+++
Sbjct: 929 FLAKRKTPPVRSTAPAS-LSRSAFLSQ-RYYEDLDEASSTSSI-----SQSLESEDTRTS 981
Query: 1189 MQSESNIFQKPTISTM--SPTLTPSLLKNPSEMPIS 1222
+ + + Q P + + +P++ PSLL P P +
Sbjct: 982 CKDDDAVVQVPRHAPVVRTPSIQPSLL--PQATPFA 1015
Score = 56 (24.8 bits), Expect = 1.3e-05, Sum P(5) = 1.3e-05
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 1128 SPVFQSNIASTRSSLSATQLSPMGWQNHARNTGDVTAEKLSSGVYFDVKSNSTLTNETKS 1187
+PV S ++ SA++ + G +H ++ LSS KS++T + ++
Sbjct: 578 APVHNSQSTASMLPFSASKPASSGPLSHPAPLS-ASSSSLSS------KSSATPSASGRA 630
Query: 1188 TMQSESNIFQKPTISTMSPTLTPSLLKNPSEMPIS 1222
S S + P++ SP +TP + K+ S P S
Sbjct: 631 AQGSPSPV---PSMVQKSPRITPPVTKSGSPQPKS 662
Score = 55 (24.4 bits), Expect = 9.6e-05, Sum P(4) = 9.6e-05
Identities = 31/125 (24%), Positives = 49/125 (39%)
Query: 633 SRVKLPVLPSSHSHEKTYENSSLGAPNVSGSFVGKPLSSKDATGSLTPVFSAKPVHGD-- 690
S+ P + S+ + + G + S + +GKP ++T + P +A P
Sbjct: 1334 SKAPSPGVTSAGAQPTKTPAAPSGFSSPSPAALGKPAEPPESTSAAAPTAAASPSPSSSS 1393
Query: 691 ----GDRASTGAGKIESLPSVRSSQFSLPQ-NFASGKSHNQKLYPSKDDYKTATLSGLPN 745
G+ T AG ++ S FS + +F+ G PS TAT LP
Sbjct: 1394 TGVFGNLPLTSAGSSGAI-SFGGLFFSGSKTSFSFGGQPASSTAPSSTPPSTAT--PLPT 1450
Query: 746 SEPNL 750
S P L
Sbjct: 1451 SLPTL 1455
Score = 54 (24.1 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 41/169 (24%), Positives = 58/169 (34%)
Query: 601 FGKEAQGNFGSAGXXXX----XXXXXXCGNFISSEDSRVKLPVLPSSHSHEKTYENSSL- 655
FG G FG G +F S+ +P S S T + ++
Sbjct: 1697 FGTSTPGVFGQPGFGQAPAFGQSTSSPASSFSFSQPGFSSVPAFGQSVSSTPTSTSGNVF 1756
Query: 656 GAPNV---SGSFVGKPLSSKDATGSL----TPVFSAKPVHGDGDRASTGAGKIESLPSVR 708
GA + S SF S+ + G P F P G G S G + +
Sbjct: 1757 GASSSTSSSSSFSFGQSSTNNGGGLFGQNNPPAFGQSPGFGQG--GSVFGGTSAATTTAS 1814
Query: 709 SSQFSLPQNFASGKSHNQKLYPSKDDYKTATLSGLPNSEPNLSK-QSGN 756
SS FS Q G S+ L+ + T+ G +S + S SGN
Sbjct: 1815 SSGFSFCQASGFGSSNTGSLFGQAAS-TSGTVFGQQSSSSSGSVFGSGN 1862
Score = 53 (23.7 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 25/114 (21%), Positives = 37/114 (32%)
Query: 609 FGSAGXXXXXXXXXXCGNFISSEDSRVKLPVLPSSHSHEKTYENSSLGAPNVSGSFVGKP 668
F SA N + ++ SS +K S G +V+ G
Sbjct: 1887 FSSASGGFGSTATPNTSNLFGNSGAKTFGGFASSSFGDQKPAGTFSSGGGSVASQGFGFS 1946
Query: 669 LSSKDATGSLTPVFSAKPVHGDGDRASTGAGKIESLPSVRSSQFSLPQNFASGK 722
+K PVF + P G S G G + + S + F+ P GK
Sbjct: 1947 TPNKTGGFGAAPVFGSPPTFG----GSPGFGGVPAFGSAPA--FTSPLGSTGGK 1994
Score = 50 (22.7 bits), Expect = 1.5e-06, Sum P(5) = 1.5e-06
Identities = 24/87 (27%), Positives = 35/87 (40%)
Query: 1203 TMSPTLTPSLLKNPSEMPISNG---KGTVPESSTI--GSEKHGAATTKT-LFVESGKNRD 1256
T P LTP+ + + N G P SS + G + G TK V S +
Sbjct: 1128 TPHPVLTPAPANQAKQGSLINALKPSGPPPASSQLSSGDKASGPVATKIETAVTSTPSTV 1187
Query: 1257 AQVSTPAAVPTSSAFP-GIVPIFDAAN 1282
Q S P + + + F GIV ++N
Sbjct: 1188 GQFSKPFSFSSGTGFNFGIVTPTPSSN 1214
Score = 50 (22.7 bits), Expect = 1.5e-06, Sum P(5) = 1.5e-06
Identities = 42/181 (23%), Positives = 67/181 (37%)
Query: 605 AQGNFGSAGXXXXXXXXXXCGNFISSEDSRVKLPVLPSSHSHEKTYENSSLGAPNVSGSF 664
A +FGS+G +S+ + +K P P S K + A S
Sbjct: 524 ASFSFGSSGFKPTLESTPMPS--VSAPNMGMK-PTFPPSAPAVKVNLSEKFTAAATSA-- 578
Query: 665 VGKPLSSKDATGSLTPVFSAKPVH-GDGDRASTGAGKIESLPSVRSSQFSLPQNFASGKS 723
P+ + +T S+ P ++KP G + + SL S S+ S A G
Sbjct: 579 ---PVHNSQSTASMLPFSASKPASSGPLSHPAPLSASSSSLSSKSSATPSASGRAAQGSP 635
Query: 724 HNQKLYPSKDDYKT--ATLSGLPNS---EPNLSKQSGNIKEMTKELDMLLQSI-EETGGF 777
K T T SG P +P ++++ G+ KE D ++ I EE F
Sbjct: 636 SPVPSMVQKSPRITPPVTKSGSPQPKSLQPPVTEKQGH---QWKESDPVMAGIGEEIAHF 692
Query: 778 R 778
+
Sbjct: 693 Q 693
Score = 48 (22.0 bits), Expect = 0.00044, Sum P(4) = 0.00044
Identities = 21/74 (28%), Positives = 34/74 (45%)
Query: 653 SSLGAPNVSGSFVGKPLSSKDATGSLTPVFSAKPVHGDGDRASTGAGKIESLPSVRSSQF 712
+++ AP S S P +S+ AT S + V SA P G T + + + SS F
Sbjct: 1578 ATISAPGASSSIPVAPETSRPATTS-SAVCSAAP----GPATET---PVFGMATSDSSVF 1629
Query: 713 SLPQNFASGKSHNQ 726
+ P +S + +Q
Sbjct: 1630 TQPSAASSSSAFSQ 1643
Score = 48 (22.0 bits), Expect = 0.00044, Sum P(4) = 0.00044
Identities = 23/77 (29%), Positives = 34/77 (44%)
Query: 652 NSSLGAPNVSGSFVGKPLSSKDATGSLTPVFSAKPVHGDGDRASTGAGKIESLPSVRSSQ 711
+++ AP VS S G P A G+ TP +P G + G+ S P+ S
Sbjct: 1679 STAAAAPQVSSSGFGSP-----AFGTSTPGVFGQPGFGQ----APAFGQSTSSPA-SSFS 1728
Query: 712 FSLPQNFASGKSHNQKL 728
FS P F+S + Q +
Sbjct: 1729 FSQP-GFSSVPAFGQSV 1744
Score = 46 (21.3 bits), Expect = 3.5e-06, Sum P(5) = 3.5e-06
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 674 ATGSL--TPVFSAKPVHGDGDRASTGAGKIESLPSVRSSQFSLPQN-FASGKS 723
++GS+ TP P D A+ A + S + +S FSLP F+ G S
Sbjct: 415 SSGSIPTTPTSPQAPQKLDVPAAAAPASVLPSSQAAPTSTFSLPSAVFSFGSS 467
Score = 45 (20.9 bits), Expect = 4.4e-06, Sum P(5) = 4.4e-06
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 1252 GKNRDAQVSTPAAVPTSSAFP 1272
GK + ST AA PT++A P
Sbjct: 1367 GKPAEPPESTSAAAPTAAASP 1387
Score = 39 (18.8 bits), Expect = 4.4e-08, Sum P(5) = 4.4e-08
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 524 NKDRQQIQNSLQKSTNLVQSPPKASLPEV 552
+ D + ++N+L K+T +++ PK LP+V
Sbjct: 889 DSDLESLRNALLKTT--LEAHPKP-LPKV 914
>UNIPROTKB|F1S0W9 [details] [associations]
symbol:NUP214 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0006611 "protein export from nucleus" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=IEA] [GO:0005487 "nucleocytoplasmic
transporter activity" evidence=IEA] InterPro:IPR001680
InterPro:IPR015943 SMART:SM00320 Gene3D:2.130.10.10 GO:GO:0051726
GO:GO:0006606 GO:GO:0006406 GO:GO:0006611 InterPro:IPR026054
PANTHER:PTHR23193 GO:GO:0005487 GeneTree:ENSGT00700000104281
OMA:FGQSPGF EMBL:FP236754 Ensembl:ENSSSCT00000006280
ArrayExpress:F1S0W9 Uniprot:F1S0W9
Length = 2081
Score = 102 (41.0 bits), Expect = 2.0e-07, Sum P(4) = 2.0e-07
Identities = 32/109 (29%), Positives = 59/109 (54%)
Query: 318 YLFLTYVERWGLAISANRKNIDDHVVLLRWSLDDEKNDIAVVDINRDKWIPRIKLQDNGN 377
+ +L YVE W L ++A+ +I+ + L R S + D +R + +P + D +
Sbjct: 304 HYYLNYVEEWDLVLAASASSIEVSI-LARQSGQSNWESWLLEDSSRAE-LP---VTDKSD 358
Query: 378 DNLIMGLCIDKVSLCGKVKVQLGVEEKELSPYFILMCLTLDGKLNMFHV 426
D+L +G+ ID + +V++ + +EK L P +LM L+ DG L F++
Sbjct: 359 DSLPVGVAIDFTT---QVEITVN-DEKTLPPAPVLMLLSTDGVLCPFYM 403
Score = 96 (38.9 bits), Expect = 2.0e-07, Sum P(4) = 2.0e-07
Identities = 60/211 (28%), Positives = 96/211 (45%)
Query: 35 IRDDDSQFDLQNPPSLPLAVSQLSHQLIFAAHSSGFCVARTNDVIDAAKEMKENGTRCCV 94
+R DS +L S LAVS + L+FA +SG + T +++ K + V
Sbjct: 25 VRIFDSPEELPKERSSLLAVSN-KYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNK--IV 81
Query: 95 QELSVVDVPFENENVDILSLSNDESTLAVSLYQSPH---IHFFSVHSLLN--KEIKPSFS 149
++ + VP + + L+LS D TL+V + S + I FF V + N K+ K F+
Sbjct: 82 DKVQSLLVPMKFP-IHHLALSCDNLTLSVCMMSSEYGSIIAFFDVRTFSNEAKQQKRPFA 140
Query: 150 ---CSLNGSTYVKDIRWRKKPENSF---LALSNVGRLY---RGGVNGPLEDVMDNVDAVE 200
S + V D++W + LA ++ L V L + V +V
Sbjct: 141 YHKLSKDAGGMVIDMKWNPTVASMVAVCLADGSIAVLQVTETVKVCATLPSTV-GVTSVC 199
Query: 201 WSVKGKFVAVAKKN--VLSIL-TSKLKERLP 228
WS KGK +AV K+N V+ L T + K+ +P
Sbjct: 200 WSPKGKQLAVGKQNGTVVQYLPTLQEKKVIP 230
Score = 67 (28.6 bits), Expect = 2.0e-07, Sum P(4) = 2.0e-07
Identities = 58/270 (21%), Positives = 111/270 (41%)
Query: 1024 DSLDRSWASFEPPKTTVKRMLLQDHQKCSQVKSSLKD--KQQISP--HMLEGAAIVRPKD 1079
D LD W K KR+L+ + + ++ ++ QQ H+++ +R
Sbjct: 831 DVLDLEWDRHLEQKRKQKRLLVPERETLFNTLANNREIINQQRKRLNHLVDSLQQLRLYK 890
Query: 1080 RTTP-----------STSWNPLRIKGLQDASLKQTSESQSTLFKWAGDPTGPSQMTGLKS 1128
+T+P ST ++ L++A LK T ES S P + L++
Sbjct: 891 QTSPWSRGLDAPSQSSTQSFDSDLESLRNALLKTTLESHSKPLPKVPAKLSPVKQAQLRN 950
Query: 1129 PVFQSNIASTRSSLSATQLSPMGWQNHARNTGDVTAEKLSSGVYFDVKSNSTLTNETKST 1188
+ + RS+ A+ LS + + R D+ +S + S S + + +++
Sbjct: 951 FLAKRKTPPVRSTAPAS-LSRSAFLSQ-RYYEDLDEVSSTSSI-----SQSLESEDARAS 1003
Query: 1189 MQSESNIFQKPTISTM--SPTLTPSLLKN--P-SEMPISNGK--GTVPESSTIGSEKHGA 1241
+ E Q P + + +P++ PSLL P ++ P+S+G G ST S+
Sbjct: 1004 GKEEEAAVQVPRHAPVVRTPSIQPSLLPQATPFAKSPLSHGSPAGMGTSVSTSPSKVIPQ 1063
Query: 1242 ATTKTLFV-ESGKNRDAQVSTPAAVPTSSA 1270
T+ ++ K+ S P + P ++A
Sbjct: 1064 GADSTMLATKTVKHGAPGPSHPISAPQAAA 1093
Score = 60 (26.2 bits), Expect = 4.2e-05, Sum P(4) = 4.2e-05
Identities = 31/156 (19%), Positives = 41/156 (26%)
Query: 605 AQGNFGSAGXXXXX-----XXXXXCGNFISSEDSRVKLPVLPSSHSHEKTYENSSLGAPN 659
A G FGS G F SS K SS + PN
Sbjct: 1897 ASGGFGSTATPNTSNLFGNSGAKTFGGFASSSFGDQKPTGTFSSGGGSVASQGFGFSTPN 1956
Query: 660 VSGSFVGKPLSSKDATGSLTPVFSAKPVHGDGDRASTGAGKIESLPSVRSSQFSLPQNFA 719
+G F P+ T +P F P G ++ G + + F
Sbjct: 1957 KTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFG 2016
Query: 720 SGKSHNQKLYPSKDDYKTATLSGLPNSEPNLSKQSG 755
G N + + T L QSG
Sbjct: 2017 FGSGGNTTSFGTLASQNAPTFGSLSQQSSGFGTQSG 2052
Score = 59 (25.8 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 29/96 (30%), Positives = 46/96 (47%)
Query: 1188 TMQSESNIFQKPTISTMSPTLTPSLLKNPSEMPISNGKGTVPESSTIGSEKHGAATTKTL 1247
T+ S S++F +P S+ S + L NP+ T P ++ + + A+T +L
Sbjct: 1628 TVTSGSSVFTQPPASSSSSAFS-QLTGNPA---------TAPSATPMFGQV-AASTAPSL 1676
Query: 1248 FVESGKNRDAQVSTPAAVP-TSSAFPGIVPIFDAAN 1282
F G+ + ST AA P SSA G P F A++
Sbjct: 1677 F---GQQTGSLASTAAATPQVSSAGFGS-PAFGASS 1708
Score = 54 (24.1 bits), Expect = 2.0e-07, Sum P(4) = 2.0e-07
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 667 KPLSSKDATGSLTPVFSAKPVHGDGDRASTGAGKIESLPSVRSSQFSLP 715
+P SS +T S TP S P D A A + S P+ +S FSLP
Sbjct: 427 QPKSS-GSTPS-TPTSSQAPQKLDAPAAVAPASVLPSPPAAPASTFSLP 473
Score = 53 (23.7 bits), Expect = 2.5e-07, Sum P(4) = 2.5e-07
Identities = 55/256 (21%), Positives = 84/256 (32%)
Query: 544 PPKASLPEVTSFGVRDSSKTGT-----------QDXXXXXXXXXXXXXKFPTDTPXXXXX 592
PP P V SFG S +G D F P
Sbjct: 473 PPAVGAPAVFSFGSSSSKASGPVAGEAPPFSSGSDSSKATPGSGAATFSFAPPPPPTSLT 532
Query: 593 XXXXXXXEFGKEAQGNFGSAGXXXXXXXXXXCGNFISSEDSRVKLPVLPSSHSHEKTYEN 652
A +FGS+G +S+ + +K P P S S K +
Sbjct: 533 LTPAASPMAPPAASFSFGSSGFKPTLESTPVPS--VSTPNIGMK-PTFPPSASAVKVNLS 589
Query: 653 SSLGAPNVSGSFVGKPLSSKDATGSLTPVFSAKPVHGDG--------DRASTGAGKIESL 704
A S P+ S + S+ P ++KP A++ + K
Sbjct: 590 EKFTA---SAPAAPAPVHSSQSAPSMLPFSASKPASSGALSHPAPLSASATSVSSKSSGS 646
Query: 705 PSV-RSSQFSLPQNFASGKSHNQKLYPSKDDYKTATLSGLPNSEPNLSKQSGNIKEMTKE 763
PS RSSQ S P S + ++ P +A L +P ++++ G+ KE
Sbjct: 647 PSAARSSQGS-PNPVPSLVQKSPRITPPVAKPGSAQAKSL---QPPVTEKQGH---QWKE 699
Query: 764 LDMLLQSI-EETGGFR 778
D ++ I EE F+
Sbjct: 700 ADPVMAGIGEEIAHFQ 715
Score = 53 (23.7 bits), Expect = 3.3e-05, Sum P(5) = 3.3e-05
Identities = 28/120 (23%), Positives = 43/120 (35%)
Query: 638 PVLPSSHSHEKTYENSSLGAPNVSGSFVGKPLSSKDATGSLTPVFSAKPVHGDGDRASTG 697
P P+S + + + AP S + P ++ +T SL P A V G +S
Sbjct: 435 PSTPTSSQAPQKLDAPAAVAP---ASVLPSPPAAPASTFSLPPAVGAPAVFSFGSSSSKA 491
Query: 698 AGKIES-LPSVRSSQFSLPQNFASGKSHNQKLYPSKDDYKTATLSGLPNSEPNLSKQSGN 756
+G + P S S SG + P T T + P + P S G+
Sbjct: 492 SGPVAGEAPPFSSGSDSSKATPGSGAATFSFAPPPPPTSLTLTPAASPMAPPAASFSFGS 551
Score = 53 (23.7 bits), Expect = 0.00019, Sum P(4) = 0.00019
Identities = 25/114 (21%), Positives = 37/114 (32%)
Query: 609 FGSAGXXXXXXXXXXCGNFISSEDSRVKLPVLPSSHSHEKTYENSSLGAPNVSGSFVGKP 668
F SA N + ++ SS +K S G +V+ G
Sbjct: 1894 FSSASGGFGSTATPNTSNLFGNSGAKTFGGFASSSFGDQKPTGTFSSGGGSVASQGFGFS 1953
Query: 669 LSSKDATGSLTPVFSAKPVHGDGDRASTGAGKIESLPSVRSSQFSLPQNFASGK 722
+K PVF + P G S G G + + S + F+ P GK
Sbjct: 1954 TPNKTGGFGAAPVFGSPPTFG----GSPGFGGVPAFGSAPA--FTSPLGSTGGK 2001
Score = 52 (23.4 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 32/111 (28%), Positives = 45/111 (40%)
Query: 641 PSSHSHEKTYENSSLGAPNVSGSFVGKPLSSKDATGSL-----TPVFSAKPVHGDGDRAS 695
P+S S + SS + + S SF G+ SS + G L P F P G G S
Sbjct: 1755 PASSSGN-VFGASSSTSSSSSFSF-GQ--SSANTGGGLFGQSNLPAFGQSPGFGQG--GS 1808
Query: 696 TGAGKIESLPSVRSSQFSLPQNFASGKSHNQKLYPSKDDYKTATLSGLPNS 746
G + + SS FS Q G S+ L+ + T+ G P+S
Sbjct: 1809 VFGGTSAATTTASSSGFSFCQASGFGSSNTGSLFGQAAN-TGGTVFGQPSS 1858
Score = 46 (21.3 bits), Expect = 2.6e-05, Sum P(5) = 2.6e-05
Identities = 20/79 (25%), Positives = 32/79 (40%)
Query: 1136 ASTRSSLSATQLSPMGWQNHARNTGDVTAEKLSSGVYFDVKSNSTLTNETKSTMQSESNI 1195
A SS SA + P A ++G ++ S V S S+ + + Q N
Sbjct: 601 APVHSSQSAPSMLPFSASKPA-SSGALSHPAPLSASATSVSSKSSGSPSAARSSQGSPN- 658
Query: 1196 FQKPTISTMSPTLTPSLLK 1214
P++ SP +TP + K
Sbjct: 659 -PVPSLVQKSPRITPPVAK 676
Score = 43 (20.2 bits), Expect = 2.6e-05, Sum P(5) = 2.6e-05
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 1251 SGKNRDAQVSTPAAVP---TSSAFPGIVP 1276
SGK +A V P P T S P ++P
Sbjct: 1003 SGKEEEAAVQVPRHAPVVRTPSIQPSLLP 1031
Score = 38 (18.4 bits), Expect = 0.00018, Sum P(5) = 0.00018
Identities = 15/50 (30%), Positives = 19/50 (38%)
Query: 637 LPVLPSSHSHEKTYENSSLGAPNVSGSFVGKPLSSKDATGSLTPVFSAKP 686
LP + S ++ SL S SF G P S A S P + P
Sbjct: 1409 LPPTTAGSSGVISFGGMSLSGTKTSFSFGGPPTSG--AAPSSAPSATTAP 1456
Score = 37 (18.1 bits), Expect = 4.2e-05, Sum P(4) = 4.2e-05
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 524 NKDRQQIQNSLQKSTNLVQSPPKASLP 550
+ D + ++N+L K+T S P +P
Sbjct: 911 DSDLESLRNALLKTTLESHSKPLPKVP 937
>UNIPROTKB|P35658 [details] [associations]
symbol:NUP214 "Nuclear pore complex protein Nup214"
species:9606 "Homo sapiens" [GO:0005487 "nucleocytoplasmic
transporter activity" evidence=IEA] [GO:0006406 "mRNA export from
nucleus" evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006611 "protein export from nucleus"
evidence=IMP] [GO:0005215 "transporter activity" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005975 "carbohydrate metabolic process"
evidence=TAS] [GO:0008645 "hexose transport" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0010827 "regulation
of glucose transport" evidence=TAS] [GO:0015758 "glucose transport"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR001680
InterPro:IPR015943 SMART:SM00320 GO:GO:0005829
Pathway_Interaction_DB:nfat_3pathway Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0010467 GO:GO:0016071 GO:GO:0005654
GO:GO:0016032 Gene3D:2.130.10.10 GO:GO:0044281 GO:GO:0005975
GO:GO:0005643 GO:GO:0019221 GO:GO:0015758 GO:GO:0010827
GO:GO:0055085 GO:GO:0005215 GO:GO:0051726 GO:GO:0006606
eggNOG:NOG12793 GO:GO:0006406 EMBL:AL157938 GO:GO:0006611
Pathway_Interaction_DB:bmppathway
Pathway_Interaction_DB:smad2_3pathway PDB:3FHC PDB:3FMO PDB:3FMP
PDBsum:3FHC PDBsum:3FMO PDBsum:3FMP Orphanet:98277
InterPro:IPR026054 PANTHER:PTHR23193 GO:GO:0005487 CTD:8021
KO:K14317 EMBL:X64228 EMBL:AB159230 EMBL:D14689 EMBL:BC045620
EMBL:BC105998 IPI:IPI00183294 IPI:IPI00646361 IPI:IPI00900318
IPI:IPI00900325 IPI:IPI00900331 PIR:S26058 RefSeq:NP_005076.3
UniGene:Hs.654530 PDB:2OIT PDBsum:2OIT ProteinModelPortal:P35658
SMR:P35658 DIP:DIP-38367N IntAct:P35658 MINT:MINT-121482
STRING:P35658 PhosphoSite:P35658 DMDM:205831380 PaxDb:P35658
PRIDE:P35658 Ensembl:ENST00000359428 Ensembl:ENST00000411637
Ensembl:ENST00000451030 GeneID:8021 KEGG:hsa:8021 UCSC:uc004caf.1
UCSC:uc004cag.3 UCSC:uc004cah.3 GeneCards:GC09P134000
HGNC:HGNC:8064 HPA:HPA018404 MIM:114350 neXtProt:NX_P35658
PharmGKB:PA31851 HOVERGEN:HBG052683 OMA:FGQSPGF OrthoDB:EOG41G33J
ChiTaRS:NUP214 EvolutionaryTrace:P35658 GenomeRNAi:8021
NextBio:30584 ArrayExpress:P35658 Bgee:P35658 CleanEx:HS_NUP214
Genevestigator:P35658 GermOnline:ENSG00000126883 Uniprot:P35658
Length = 2090
Score = 97 (39.2 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 30/109 (27%), Positives = 59/109 (54%)
Query: 318 YLFLTYVERWGLAISANRKNIDDHVVLLRWSLDDEKNDIAVVDINRDKWIPRIKLQDNGN 377
+ +L+Y+E W L ++A+ + + + L R S + D +R + +P + D +
Sbjct: 304 HYYLSYIEEWDLVLAASAASTEVSI-LARQSDQINWESWLLEDSSRAE-LP---VTDKSD 358
Query: 378 DNLIMGLCIDKVSLCGKVKVQLGVEEKELSPYFILMCLTLDGKLNMFHV 426
D+L MG+ +D + +V++ + +EK L P +LM L+ DG L F++
Sbjct: 359 DSLPMGVVVDYTN---QVEITIS-DEKTLPPAPVLMLLSTDGVLCPFYM 403
Score = 84 (34.6 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 59/218 (27%), Positives = 97/218 (44%)
Query: 35 IRDDDSQFDLQNPPSLPLAVSQLSHQLIFAAHSSGFCVARTNDVIDAAKEMKENGTRCCV 94
+R DS +L S LAVS + L+FA +SG + T +++ K + V
Sbjct: 25 VRIFDSPEELPKERSSLLAVSN-KYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNK--IV 81
Query: 95 QELSVVDVPFENENVDILSLSNDESTLAVSLYQSPH---IHFFSVHSLLN--KEIKPSFS 149
++ + VP + + L+LS D TL+ + S + I FF V + N K+ K F+
Sbjct: 82 DKVQGLLVPMKFP-IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFA 140
Query: 150 CSL---NGSTYVKDIRWRKKPENSF---LALSNVGRLY---RGGVNGPLEDVMDNVDAVE 200
+ V D++W + LA ++ L V L + V +V
Sbjct: 141 YHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVA-VTSVC 199
Query: 201 WSVKGKFVAVAKKN--VLSIL-TSKLKERLPISLSFKS 235
WS KGK +AV K+N V+ L T + K+ +P ++S
Sbjct: 200 WSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYES 237
Score = 77 (32.2 bits), Expect = 7.5e-06, Sum P(4) = 7.5e-06
Identities = 98/475 (20%), Positives = 174/475 (36%)
Query: 843 DSRYWDLWNRQKLSPELELKRGHILSINQDL------INQLIELERHFNSLELNKFGEND 896
DS Y L ++ L P+ E + I ++Q + +N +++LE LE K
Sbjct: 791 DSGYLHLLYKRPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWD-QHLEQKKKQR-- 847
Query: 897 GVHGCQRRPQSRFGT-SRHIQSLHSLHTTMSSQIAAAEQLSDRLSKQMALLSIESPVKQQ 955
H ++ F T + + + ++ ++ + + +QL RL KQ +L S+ S V Q
Sbjct: 848 --HLLVPERETLFNTLANNREIINQQRKRLNHLVDSLQQL--RLYKQTSLWSLSSAVPSQ 903
Query: 956 NVKKELFETLGIPYDASFSSPDVTKVMDQSSIKKLIHSSGSAAANDQSRRRQSSAMKSYD 1015
+ L +A + + + + A + +R++ ++S
Sbjct: 904 SSIHSFDSDLESLCNALLKTTIESHTKSLPKVPAKLSPMKQAQLRNFLAKRKTPPVRSTA 963
Query: 1016 PETARRRRDSLDRSWASFEPPKTTVKRMLLQDHQKCSQVKSSLKDKQQISPHMLEGAAIV 1075
P + R R + + +T + + ++S KD + + +
Sbjct: 964 PASLSRSAFLSQRYYEDLDEVSSTSS---VSQSLESEDARTSCKDDEAVVQAPRHAPVVR 1020
Query: 1076 RPKDRTTPSTSWNPLRIKGLQDAS---LKQTS--ESQSTLFKWAGDPTGPSQMT---GLK 1127
P + + P L S + TS S S + D T + T G
Sbjct: 1021 TPSIQPSLLPHAAPFAKSHLVHGSSPGVMGTSVATSASKIIPQGADSTMLATKTVKHGAP 1080
Query: 1128 SPVFQSNIASTRSSLSATQLSPMGWQNHARNT-GDVTAEKLSSGVYF-DVKSNSTLTNET 1185
SP I++ +++ +A M Q A NT + T + + V ++K+N T
Sbjct: 1081 SP--SHPISAPQAAAAAALRRQMASQAPAVNTLTESTLKNVPQVVNVQELKNNPA----T 1134
Query: 1186 KSTMQSESNIFQKPTISTMSPTLTPSLLKNPSEMPISNG---KGTVPESSTIGSEKHGAA 1242
ST S + T T P LTP + + N G P S + S +
Sbjct: 1135 PSTAMGSSVPYS--TAKTPHPVLTPVAANQAKQGSLINSLKPSGPTPASGQLSSGDKASG 1192
Query: 1243 TTKT-LFVESGKNRDAQVSTPAAV-PTSSAFP-GIV-PI----FDAANKSQPGGK 1289
T K V S + Q S P + P+ + F GI+ P F AA + P K
Sbjct: 1193 TAKIETAVTSTPSASGQFSKPFSFSPSGTGFNFGIITPTPSSNFTAAQGATPSTK 1247
Score = 65 (27.9 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 1162 VTAEKLSSGVYFDVKSNST-LTNETKSTM----QSESNIFQKPTISTMSPTLTPSLLKNP 1216
VTA +SS V+++ST + + T S + +E+ F T + P+ +
Sbjct: 1596 VTAAAISSAGPVAVETSSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSS 1655
Query: 1217 SEMPISNGKGTVPESSTIGSEKHGAATTKTLFVESGKNRDAQVSTPAAVP--TSSAF 1271
+ ++N T P ++ + + A+T +LF G+ + ST AA P +SS F
Sbjct: 1656 AFNQLTNNTATAPSATPVFGQV-AASTAPSLF---GQQTGSTASTAAATPQVSSSGF 1708
Score = 64 (27.6 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 36/122 (29%), Positives = 48/122 (39%)
Query: 657 APNVSGSFVGKPLSSKDATGSLTPVF----SAKPVHGDGDRASTGAGKIESLPSVRSSQF 712
AP V G P++S T S+ P S+ V G S G+ + S S
Sbjct: 1376 APPVLGKHTEPPVTSSATTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAG 1435
Query: 713 SLPQNFASGKSHNQKLYPSKDDYKTATLSGLPNSEPNLSKQSGNIKEMTKELDMLL-QSI 771
+F S ++ N + PS TA + LP S P LS S T L M +S
Sbjct: 1436 KTSFSFGSQQT-NSTVPPSAPPPTTAA-TPLPTSFPTLSFGSLLSSATTPSLPMSAGRST 1493
Query: 772 EE 773
EE
Sbjct: 1494 EE 1495
Score = 63 (27.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 31/155 (20%), Positives = 42/155 (27%)
Query: 605 AQGNFGSAGXXXXX-----XXXXXCGNFISSEDSRVKLPVLPSSHSHEKTYENSSLGAPN 659
A G FGS G F SS K SS + +PN
Sbjct: 1906 ASGGFGSTATSNTSNLFGNSGAKTFGGFASSSFGEQKPTGTFSSGGGSVASQGFGFSSPN 1965
Query: 660 VSGSFVGKPLSSKDATGSLTPVFSAKPVHGDGDRASTGAGKIESLPSVRSSQFSLPQNFA 719
+G F P+ T +P F P G ++ G + + F
Sbjct: 1966 KTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFG 2025
Query: 720 SGKSHNQKLYPSKDDYKTATLSGLPNSEPNLSKQS 754
G S N + + T L QS
Sbjct: 2026 FGSSSNTTSFGTLASQNAPTFGSLSQQTSGFGTQS 2060
Score = 59 (25.8 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 28/116 (24%), Positives = 40/116 (34%)
Query: 609 FGSAGXXXXXXXXXXCGNFISSEDSRVKLPVLPSSHSHEKTYENSSLGAPNVSGSFVGKP 668
F SA N + ++ SS +K S G +V+ G
Sbjct: 1903 FSSASGGFGSTATSNTSNLFGNSGAKTFGGFASSSFGEQKPTGTFSSGGGSVASQGFG-- 1960
Query: 669 LSSKDATGSL--TPVFSAKPVHGDGDRASTGAGKIESLPSVRSSQFSLPQNFASGK 722
SS + TG PVF + P G S G G + + S + F+ P GK
Sbjct: 1961 FSSPNKTGGFGAAPVFGSPPTFG----GSPGFGGVPAFGSAPA--FTSPLGSTGGK 2010
Score = 57 (25.1 bits), Expect = 0.00061, Sum P(4) = 0.00061
Identities = 28/106 (26%), Positives = 44/106 (41%)
Query: 1175 VKSNSTLTNETKSTMQSESNIFQKPTISTMSPTLTPSL---LKNPSEMPISNGKGTVP-E 1230
V + T ST S S P +S S P+ L +P+ P+S +VP +
Sbjct: 585 VNLSEKFTAAATSTPVSSSQ--SAPPMSPFSSASKPAASGPLSHPT--PLSAPPSSVPLK 640
Query: 1231 SSTIGSEKHGAATTKTLFVESGKNRDAQVSTPAAVPTSSAFPGIVP 1276
SS + S +A + V S + +++ PAA P S + P
Sbjct: 641 SSVLPSPSGRSAQGSSSPVPSMVQKSPRITPPAAKPGSPQAKSLQP 686
Score = 55 (24.4 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 23/92 (25%), Positives = 42/92 (45%)
Query: 670 SSKDATGSLTPVFSAKPVHGDGDRASTGAGKIESLPSVRSSQFSLPQNFAS---GKSHNQ 726
S+ + T S++PV G ST + K+E+ PS + + P + A G
Sbjct: 1279 SASNTTPGEPAASSSRPVAPSGTALSTTSSKLETPPS-KLGELLFPSSLAGETLGSFSGL 1337
Query: 727 KLYPSKDDYKT---ATLSGLPNSEPNLSKQSG 755
++ + D K A+ + L +++P +K SG
Sbjct: 1338 RVGQADDSTKPTNKASSTSLTSTQP--TKTSG 1367
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 52/201 (25%), Positives = 80/201 (39%)
Query: 1078 KDRTTPSTSWNPLRIKGLQDASLKQTSESQSTLFKWAGDPTGPSQMTGLKSPVFQSNIAS 1137
K +T TS P + G+ + T+ L K P S T +P ++ +S
Sbjct: 1351 KASSTSLTSTQPTKTSGVP-SGFNFTAPP--VLGKHTEPPVTSSATTTSVAPPAATSTSS 1407
Query: 1138 TR--SSLSATQLSPMGWQNHARNTGDVTAEKLSSGVYFDVKSNSTLTNETKSTMQSESNI 1195
T SL T G + + ++A K S F S T N T
Sbjct: 1408 TAVFGSLPVTSAGSSGVISFGGTS--LSAGKTS----FSFGSQQT--NSTVPPSAPPPTT 1459
Query: 1196 FQKPTISTMSPTLT-PSLLKNPS--EMPISNGKGTVPESSTIGSEKHG----AATTKTLF 1248
P + T PTL+ SLL + + +P+S G+ T +S+ EK G +A+ +L
Sbjct: 1460 AATP-LPTSFPTLSFGSLLSSATTPSLPMSAGRSTEEATSSALPEKPGDSEVSASAASLL 1518
Query: 1249 VESGKNRDAQVSTPAAVPTSS 1269
E + AQ+ P A P +S
Sbjct: 1519 EEQ---QSAQL--PQAPPQTS 1534
Score = 54 (24.1 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 26/67 (38%), Positives = 30/67 (44%)
Query: 658 PNVSGSFVGKPLSSKDATG-SLTPVF-----SAKP-VHGD--GDRASTGAGKIESLPSVR 708
P S S L++ AT S TPVF S P + G G AST A + P V
Sbjct: 1649 PAASSSSAFNQLTNNTATAPSATPVFGQVAASTAPSLFGQQTGSTASTAA----ATPQVS 1704
Query: 709 SSQFSLP 715
SS FS P
Sbjct: 1705 SSGFSSP 1711
Score = 45 (20.9 bits), Expect = 7.5e-06, Sum P(4) = 7.5e-06
Identities = 21/76 (27%), Positives = 31/76 (40%)
Query: 679 TPVFSAKPVHGDGDRASTGAGKIESLPSVRSSQFSLPQNFASGKSHNQKLYPSKDDYKTA 738
TP S P D A+ A S P+ + FSL +G + + S +A
Sbjct: 437 TPTSSQAPQKLDASAAAAPASLPPSSPAAPIATFSL---LPAGGAPTVFSFGSSSLKSSA 493
Query: 739 TLSGLPNSEPNLSKQS 754
T++G P S + S S
Sbjct: 494 TVTGEPPSYSSGSDSS 509
Score = 43 (20.2 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 637 LPVLPSSHSHEKTYENSSLGAPNVSGSFVGKPLSSKDATGSLTPVFSAKPV 687
LPV + S ++ +SL A S SF + +S + P +A P+
Sbjct: 1414 LPVTSAGSSGVISFGGTSLSAGKTSFSFGSQQTNSTVPPSAPPPTTAATPL 1464
Score = 38 (18.4 bits), Expect = 0.00049, Sum P(4) = 0.00049
Identities = 25/89 (28%), Positives = 36/89 (40%)
Query: 641 PSSHSHEKTYENSSLGAPNVSGSFVGKPLSSKDATGSLTPVFSAKPVHGDGDRASTGAG- 699
P S+S + +SS AP S SK SL P +A PV S G+
Sbjct: 499 PPSYS---SGSDSSKAAPGPGPSTFSFVPPSK---ASLAPTPAASPVAPSAASFSFGSSG 552
Query: 700 ---KIES--LPSVRSSQFSLPQNFASGKS 723
+ES +PSV + ++ +F S
Sbjct: 553 FKPTLESTPVPSVSAPNIAMKPSFPPSTS 581
>CGD|CAL0006203 [details] [associations]
symbol:orf19.4906 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000082
"G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] CGD:CAL0006203
EMBL:AACQ01000001 RefSeq:XP_723588.1 GeneID:3634835
KEGG:cal:CaO19.4906 Uniprot:Q5APQ2
Length = 768
Score = 150 (57.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 91/414 (21%), Positives = 162/414 (39%)
Query: 868 SINQDLINQLIELERH-FNSLELNKFGENDGVHGCQRRPQSRFGTSRHIQSLHSLHTTMS 926
SI Q + L+ ++ F++ ++F N + Q S +S + + T++S
Sbjct: 47 SIQQQQTSSLMSTNQNSFSTTTTSQFTSNSSPNSAQTFSSSPENSSSRMSTPT---TSIS 103
Query: 927 SQIAAAEQLSDRLSKQMALLSIESPVKQQNVKKELFETLGIPYDASFSSPDVTKVMDQSS 986
+Q A+ + S Q + S +S QQ+ + + + P S +P T + +S
Sbjct: 104 TQPASTTSIQQSQSLQTSQQSQQSQQSQQSQQSQQSQPSQSPTSTS-QAPSSTMSDNNTS 162
Query: 987 IKKLIHSSGSAAANDQSRRRQSSAMKSYDPETARRRRDSLDRSWASFEPPKTTVKRMLLQ 1046
+S S +A S SS+ S P T+ D S AS P TT
Sbjct: 163 FVSPSDTSLSVSATTTSSSSTSSSSSSSTPSTS----DVTTSSSASSSPSSTTSSSSSTA 218
Query: 1047 DHQKCSQVKSSLKDKQQISPHMLEGAAIVRPKDRTTPSTSWNPLRIKGLQDASLKQTSES 1106
++ SS + ++I + T+ S++ + AS +S +
Sbjct: 219 FSSSTTETSSSATSSSSTT-----SSSISSTQSNTSSSSNTS---FSSSTTASSSFSSST 270
Query: 1107 QSTLFKWAGDPTGPSQMTGLKSPVFQSNIASTRSSLSATQLSPMGWQNHARNTGDVTAEK 1166
S+ T S ++ S F ++ ++ SS S++ +SP + + N ++
Sbjct: 271 SSSFSPSPSSTTSSSSISSTSSS-FTTSSDTSASSSSSSSVSPSSTTSSSSNFSSSSSSS 329
Query: 1167 L--SSGVYFDVKSNSTLTNETKSTMQSESNIFQKPTISTMSPTLTPSLLKNPSEMPISNG 1224
SS + S+S E ST S S+ + ST S + T + ++ +
Sbjct: 330 TITSSSTTSSIPSSS----EVSSTSTSASSSSSDSSTSTSSSSETDQSSSSTTQSSTRSS 385
Query: 1225 KGTVPESSTI-GSEKHGAATTKTLFVESG----KNRDAQVSTPAAVPTSSAFPG 1273
T +SS+I S + T F S KN D ++T AVPTS+ G
Sbjct: 386 STTTSKSSSITDSPTTSKGNSITSFTSSYTSIIKNPDTTITTVVAVPTSAEVSG 439
Score = 125 (49.1 bits), Expect = 0.00078, P = 0.00078
Identities = 75/363 (20%), Positives = 141/363 (38%)
Query: 912 SRHIQSLHSLHTTMSSQIAAAEQLSDRLSKQM--ALLSIESPVKQQNVKKELFETLGIPY 969
S + S + ++ ++Q + E S + +Q +L+S + F + P
Sbjct: 21 STDLLSTSTSFSSRTTQGSTTEPSSSSIQQQQTSSLMSTNQNSFSTTTTSQ-FTSNSSPN 79
Query: 970 DA-SFSS-PDVTKVMDQSSIKKLIHSSGSAAANDQSRRRQSSAMKSYDPETARRRRDSLD 1027
A +FSS P+ + + + S + QS+ Q+S +S + +++ + S
Sbjct: 80 SAQTFSSSPENSSSRMSTPTTSISTQPASTTSIQQSQSLQTS-QQSQQSQQSQQSQQS-Q 137
Query: 1028 RSWASFEPPKTTVKRMLLQDHQKCSQVKSSLKDKQQISPHMLEGAAIVRPKDRTTPSTSW 1087
+S S P T+ S V S +S ++ +TPSTS
Sbjct: 138 QSQPSQSPTSTSQAPSSTMSDNNTSFVSPS-DTSLSVSATTTSSSSTSSSSSSSTPSTS- 195
Query: 1088 NPLRIKGLQDASLKQTSESQSTLFKWAGDPTGPSQMTGLKSPVFQSNIASTRSSLSATQL 1147
+ + TS S ST F + T S + S S+I+ST+S+ S++
Sbjct: 196 DVTTSSSASSSPSSTTSSSSSTAFSSSTTETSSSATSS--SSTTSSSISSTQSNTSSSSN 253
Query: 1148 SPMGWQNHARNTGDVTAEKLSSGVYFDVKSNSTLTNETKSTMQSESNIFQKPTISTMSPT 1207
+ A ++ + S S+S++++ + S S + S++SP+
Sbjct: 254 TSFSSSTTASSSFSSSTSSSFSPSPSSTTSSSSISSTSSSFTTSSDTSASSSSSSSVSPS 313
Query: 1208 LTPSLLKNPSEMPISNGKGTVPESSTIGSEKHGAATTKTLFVESGKNRDAQVSTPAAVPT 1267
T S N S S+ T+ SST S + + T S + D+ ST ++ T
Sbjct: 314 STTSSSSNFSS---SSSSSTITSSSTTSSIPSSSEVSSTSTSASSSSSDSSTSTSSSSET 370
Query: 1268 SSA 1270
+
Sbjct: 371 DQS 373
>UNIPROTKB|Q5APQ2 [details] [associations]
symbol:CaO19.4906 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] CGD:CAL0006203 EMBL:AACQ01000001
RefSeq:XP_723588.1 GeneID:3634835 KEGG:cal:CaO19.4906
Uniprot:Q5APQ2
Length = 768
Score = 150 (57.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 91/414 (21%), Positives = 162/414 (39%)
Query: 868 SINQDLINQLIELERH-FNSLELNKFGENDGVHGCQRRPQSRFGTSRHIQSLHSLHTTMS 926
SI Q + L+ ++ F++ ++F N + Q S +S + + T++S
Sbjct: 47 SIQQQQTSSLMSTNQNSFSTTTTSQFTSNSSPNSAQTFSSSPENSSSRMSTPT---TSIS 103
Query: 927 SQIAAAEQLSDRLSKQMALLSIESPVKQQNVKKELFETLGIPYDASFSSPDVTKVMDQSS 986
+Q A+ + S Q + S +S QQ+ + + + P S +P T + +S
Sbjct: 104 TQPASTTSIQQSQSLQTSQQSQQSQQSQQSQQSQQSQPSQSPTSTS-QAPSSTMSDNNTS 162
Query: 987 IKKLIHSSGSAAANDQSRRRQSSAMKSYDPETARRRRDSLDRSWASFEPPKTTVKRMLLQ 1046
+S S +A S SS+ S P T+ D S AS P TT
Sbjct: 163 FVSPSDTSLSVSATTTSSSSTSSSSSSSTPSTS----DVTTSSSASSSPSSTTSSSSSTA 218
Query: 1047 DHQKCSQVKSSLKDKQQISPHMLEGAAIVRPKDRTTPSTSWNPLRIKGLQDASLKQTSES 1106
++ SS + ++I + T+ S++ + AS +S +
Sbjct: 219 FSSSTTETSSSATSSSSTT-----SSSISSTQSNTSSSSNTS---FSSSTTASSSFSSST 270
Query: 1107 QSTLFKWAGDPTGPSQMTGLKSPVFQSNIASTRSSLSATQLSPMGWQNHARNTGDVTAEK 1166
S+ T S ++ S F ++ ++ SS S++ +SP + + N ++
Sbjct: 271 SSSFSPSPSSTTSSSSISSTSSS-FTTSSDTSASSSSSSSVSPSSTTSSSSNFSSSSSSS 329
Query: 1167 L--SSGVYFDVKSNSTLTNETKSTMQSESNIFQKPTISTMSPTLTPSLLKNPSEMPISNG 1224
SS + S+S E ST S S+ + ST S + T + ++ +
Sbjct: 330 TITSSSTTSSIPSSS----EVSSTSTSASSSSSDSSTSTSSSSETDQSSSSTTQSSTRSS 385
Query: 1225 KGTVPESSTI-GSEKHGAATTKTLFVESG----KNRDAQVSTPAAVPTSSAFPG 1273
T +SS+I S + T F S KN D ++T AVPTS+ G
Sbjct: 386 STTTSKSSSITDSPTTSKGNSITSFTSSYTSIIKNPDTTITTVVAVPTSAEVSG 439
Score = 125 (49.1 bits), Expect = 0.00078, P = 0.00078
Identities = 75/363 (20%), Positives = 141/363 (38%)
Query: 912 SRHIQSLHSLHTTMSSQIAAAEQLSDRLSKQM--ALLSIESPVKQQNVKKELFETLGIPY 969
S + S + ++ ++Q + E S + +Q +L+S + F + P
Sbjct: 21 STDLLSTSTSFSSRTTQGSTTEPSSSSIQQQQTSSLMSTNQNSFSTTTTSQ-FTSNSSPN 79
Query: 970 DA-SFSS-PDVTKVMDQSSIKKLIHSSGSAAANDQSRRRQSSAMKSYDPETARRRRDSLD 1027
A +FSS P+ + + + S + QS+ Q+S +S + +++ + S
Sbjct: 80 SAQTFSSSPENSSSRMSTPTTSISTQPASTTSIQQSQSLQTS-QQSQQSQQSQQSQQS-Q 137
Query: 1028 RSWASFEPPKTTVKRMLLQDHQKCSQVKSSLKDKQQISPHMLEGAAIVRPKDRTTPSTSW 1087
+S S P T+ S V S +S ++ +TPSTS
Sbjct: 138 QSQPSQSPTSTSQAPSSTMSDNNTSFVSPS-DTSLSVSATTTSSSSTSSSSSSSTPSTS- 195
Query: 1088 NPLRIKGLQDASLKQTSESQSTLFKWAGDPTGPSQMTGLKSPVFQSNIASTRSSLSATQL 1147
+ + TS S ST F + T S + S S+I+ST+S+ S++
Sbjct: 196 DVTTSSSASSSPSSTTSSSSSTAFSSSTTETSSSATSS--SSTTSSSISSTQSNTSSSSN 253
Query: 1148 SPMGWQNHARNTGDVTAEKLSSGVYFDVKSNSTLTNETKSTMQSESNIFQKPTISTMSPT 1207
+ A ++ + S S+S++++ + S S + S++SP+
Sbjct: 254 TSFSSSTTASSSFSSSTSSSFSPSPSSTTSSSSISSTSSSFTTSSDTSASSSSSSSVSPS 313
Query: 1208 LTPSLLKNPSEMPISNGKGTVPESSTIGSEKHGAATTKTLFVESGKNRDAQVSTPAAVPT 1267
T S N S S+ T+ SST S + + T S + D+ ST ++ T
Sbjct: 314 STTSSSSNFSS---SSSSSTITSSSTTSSIPSSSEVSSTSTSASSSSSDSSTSTSSSSET 370
Query: 1268 SSA 1270
+
Sbjct: 371 DQS 373
>RGD|1304977 [details] [associations]
symbol:Nup214 "nucleoporin 214" species:10116 "Rattus
norvegicus" [GO:0005487 "nucleocytoplasmic transporter activity"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO] [GO:0006606 "protein import into nucleus"
evidence=IEA;ISO] [GO:0006611 "protein export from nucleus"
evidence=IEA;ISO] [GO:0051726 "regulation of cell cycle"
evidence=IEA;ISO] InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 SMART:SM00320 RGD:1304977 Gene3D:2.130.10.10
GO:GO:0051726 GO:GO:0006606 GO:GO:0006406 GO:GO:0006611
InterPro:IPR026054 PANTHER:PTHR23193 GO:GO:0005487
GeneTree:ENSGT00700000104281 CTD:8021 KO:K14317 OrthoDB:EOG41G33J
IPI:IPI00372002 RefSeq:NP_001162031.1 UniGene:Rn.101794
PRIDE:D4ACK1 Ensembl:ENSRNOT00000037164 GeneID:296634
KEGG:rno:296634 UCSC:RGD:1304977 NextBio:641552 Uniprot:D4ACK1
Length = 2067
Score = 99 (39.9 bits), Expect = 3.6e-06, Sum P(4) = 3.6e-06
Identities = 31/109 (28%), Positives = 59/109 (54%)
Query: 318 YLFLTYVERWGLAISANRKNIDDHVVLLRWSLDDEKNDIAVVDINRDKWIPRIKLQDNGN 377
+ +L+Y+E W L ++A+ + + + L R S + D +R + +P + D +
Sbjct: 304 HYYLSYIEEWDLVLAASAASTEVSI-LARQSDQTNWESWVLEDSSRAE-LP---VTDKSD 358
Query: 378 DNLIMGLCIDKVSLCGKVKVQLGVEEKELSPYFILMCLTLDGKLNMFHV 426
D+L +G+ ID + +V+V + EEK L P +L+ L+ DG L F++
Sbjct: 359 DSLPVGVAIDYTN---EVEVAIN-EEKTLPPAPVLLLLSTDGVLCPFYM 403
Score = 97 (39.2 bits), Expect = 3.6e-06, Sum P(4) = 3.6e-06
Identities = 58/211 (27%), Positives = 96/211 (45%)
Query: 35 IRDDDSQFDLQNPPSLPLAVSQLSHQLIFAAHSSGFCVARTNDVIDAAKEMKENGTRCCV 94
+R DS +L S L VS + ++FA ++G V T ++ K + V
Sbjct: 25 VRIFDSPEELPKERSSVLTVSN-KYGMLFAGGTNGLNVFPTKSLLIQNKPGDDPNK--IV 81
Query: 95 QELSVVDVPFENENVDILSLSNDESTLAVSLYQSPH---IHFFSVHSLLN--KEIKPSFS 149
+ ++VP + V L+LS D TL+ + S + I FF V + N K +K F+
Sbjct: 82 DTIQGLNVPMKFP-VHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNQAKPLKRPFT 140
Query: 150 CSL--NGST-YVKDIRWRKK-PENSFLALSNVGRLYRGGVNGPLE-----DVMDNVDAVE 200
NG++ V D++W P + + L++ G + V ++ V V
Sbjct: 141 YHKLSNGASGMVNDMKWNPTVPSMAAVCLAD-GSISVLQVTDVVKVCATLPPSSGVTCVC 199
Query: 201 WSVKGKFVAVAKKN--VLSIL-TSKLKERLP 228
WS KGK +AV K+N V+ L T + K+ +P
Sbjct: 200 WSPKGKQLAVGKQNGTVVQYLPTLQEKKVIP 230
Score = 57 (25.1 bits), Expect = 3.6e-06, Sum P(4) = 3.6e-06
Identities = 59/260 (22%), Positives = 98/260 (37%)
Query: 1044 LLQDHQKCSQVKSSLKDKQQISPHMLEGAAIVRPKDRTTPSTSWNPLRIKGLQDASLKQT 1103
LL S SS K ++ +P + + +TPS P + L ASL QT
Sbjct: 1472 LLSSPSASSLPVSSGKITEEATPPAVPDKSDHSEVSASTPSLPLQPPSAQ-LPQASL-QT 1529
Query: 1104 SESQSTLFKWAGDPTGPSQMTGLKSPVFQSNIASTRSSLSA-----TQLSPMGWQNHARN 1158
S+ +P P+Q T + S +AST S+ A ++ + +
Sbjct: 1530 SDPVKK------EPV-PAQTTDSRPSSSASLVASTESTPVAPGGPDSKTEAVSPASTFAG 1582
Query: 1159 TGD--VTAEKLSSGVYFDVKSNSTLTNETKS----TMQSESNIFQKPTISTMSPTLTPSL 1212
G V A L +G S + T+ T S T +E+ +F T + T P+
Sbjct: 1583 PGPAVVAAVLLGAGSAASEASGTPSTSSTVSSSTPTPATETAVFGTATSGSSVFTQPPAA 1642
Query: 1213 LKNPSEMPISNGKGTVPESSTI-GSEKHGAATTKTLFVESGKNRDAQVSTPAAVPT---S 1268
+ + +S+ T P ++ + G A+T ++ + + A+ P
Sbjct: 1643 SSSSAFNQLSSNTATAPSATPVFGQVAASIASTAAATPQASSSGFGSPAFGASAPGVFGQ 1702
Query: 1269 SAFPGIVPIFDAANKSQPGG 1288
+AF G P F A S G
Sbjct: 1703 TAF-GQSPAFGQATSSPASG 1721
Score = 57 (25.1 bits), Expect = 2.6e-05, Sum P(6) = 2.6e-05
Identities = 34/129 (26%), Positives = 54/129 (41%)
Query: 1128 SPVFQSNIASTRSSLSAT-QLSPMGWQNHARNTGDVTAEKLSSGVYFDVK-SNSTLTNET 1185
+PVF AS S+ +AT Q S G+ + A + GV+ S +
Sbjct: 1662 TPVFGQVAASIASTAAATPQASSSGFGSPAFGAS-------APGVFGQTAFGQSPAFGQA 1714
Query: 1186 KSTMQSESNIFQKPTISTMSPTLTPSLLKNPSEMPISNGKGTVPESSTIGSEKHGAATTK 1245
S+ S + F +P S++ P S+ P+ +N G +S+ GS G A+T
Sbjct: 1715 TSSPASGFS-FSQPGFSSV-PAFGQSVSSTPTSTS-ANVFGATSSTSSPGSFSFGQASTN 1771
Query: 1246 TLFVESGKN 1254
T G+N
Sbjct: 1772 TGGTLFGQN 1780
Score = 54 (24.1 bits), Expect = 2.7e-05, Sum P(4) = 2.7e-05
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 1196 FQKPTISTMSPTLTPSLLKNP-SEMPISNGK-GTVP--ESSTIGSEKH-GAATT---KTL 1247
F P+ T++PT P++ P S P + G G P ES+ + S + G + T
Sbjct: 519 FAPPSKGTLAPT--PAVAPVPTSAAPFTFGSSGFKPPLESTPMSSAPNTGMKPSFPPSTS 576
Query: 1248 FVESGKNRD-AQVSTPAAVPTSSAFPGIVPIFDAANKSQPGG 1288
V+ N V++ A V +S++ P ++P F ++ K G
Sbjct: 577 SVKVNLNEKFTAVASSAPVHSSTSIPSVLP-FSSSPKPPASG 617
Score = 53 (23.7 bits), Expect = 3.6e-06, Sum P(4) = 3.6e-06
Identities = 52/228 (22%), Positives = 80/228 (35%)
Query: 544 PPKASLPEVTSFGVRDSSKTGTQDXXXXXXXXXXXXXKFPTDTPXXXXXXXXXXXXEFGK 603
PP A VT+ + DS+ T ++ +TP G
Sbjct: 1271 PPSAPSTSVTTTSLEDSAPTSSKPATPETPVSTASSK---LETPPSKLGELLFPSSLAG- 1326
Query: 604 EAQGNF-----GSAGXXXXXXXXXXCGNFISSEDSRVKLPVLPSSHSHEKTYENS-SLGA 657
E G+F G A N ++ ++ P++ K E S + A
Sbjct: 1327 ETLGSFSGLRVGQAEESTKPVSKASSTNLAGAQPAKPSGFSFPAASVLGKPVEPSVTSSA 1386
Query: 658 PNVSGSFVGKPLSSKDAT--GSLTPVFSAKPVHGDGDRASTGAGKIESLPSVR-SSQFSL 714
P S + SS AT GS+ P+ SA P G + +GA S S +Q +
Sbjct: 1387 PAAPVSALSASTSSSSATVFGSV-PLTSAAP---SGLMSFSGASLASSKASFSFGNQQTS 1442
Query: 715 PQNFASGKSHNQKLYPSKD-DYKTATLSGLPNSEP--NLSKQSGNIKE 759
A+ + + PS + T + GL +S +L SG I E
Sbjct: 1443 SAAAAAATPASTSVAPSLPASFPTLSFGGLLSSPSASSLPVSSGKITE 1490
Score = 51 (23.0 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 21/81 (25%), Positives = 30/81 (37%)
Query: 642 SSHSHEKTYENSSLGAPNVSGSFVGKPLSSKDATGSLTPVFSAKPVHGDGDRASTGAGKI 701
SS +K S G +V+ G +K PVF + P G S G G +
Sbjct: 1913 SSFGEQKPAGTFSSGGGSVASQGFGFSTPNKTGGFGAAPVFGSPPTFG----GSPGFGGV 1968
Query: 702 ESLPSVRSSQFSLPQNFASGK 722
+ S + F+ P GK
Sbjct: 1969 PAFGSAPA--FTSPLGSTGGK 1987
Score = 47 (21.6 bits), Expect = 2.6e-05, Sum P(6) = 2.6e-05
Identities = 33/112 (29%), Positives = 41/112 (36%)
Query: 641 PSSHSHEKTYEN-SSLGA--PNVSGSFVGKPLSSKDATGSLTPVFSAKPVHGDGDRASTG 697
P S KT E S+ G P SGSF P S + P ++ P+ S
Sbjct: 408 PGVRSLIKTLELISAEGERQPKSSGSFPSTPPSPQAPQNLDAPATASSPL----PPVSAA 463
Query: 698 AGKIESLPSVRS--SQFSL-PQNFASGKSHNQKL-YPS-KDDYKTATLSGLP 744
LPS S FS P F S + YP+ D + A SG P
Sbjct: 464 PTATFPLPSAGGGPSVFSFGPSPFKSSSIPGEPPPYPTGSDSSRAAPASGTP 515
Score = 47 (21.6 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 23/66 (34%), Positives = 27/66 (40%)
Query: 1210 PSLLK-NPSEMPISNGKGTVPESSTIGSEKHGAAT---TKTL-FVESGKNRDAQVSTPAA 1264
PS+ PS S+ G P T GS+ AA T T F K A A
Sbjct: 477 PSVFSFGPSPFKSSSIPGEPPPYPT-GSDSSRAAPASGTPTFSFAPPSKGTLAPTPAVAP 535
Query: 1265 VPTSSA 1270
VPTS+A
Sbjct: 536 VPTSAA 541
Score = 46 (21.3 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 17/86 (19%), Positives = 26/86 (30%)
Query: 658 PNVSGSFVGKPLSSKDATGSLTPVFSAKPVHGDGDRASTGAGKIESLPSVRSSQFSLPQN 717
PN +G F P+ T +P F P G ++ G + +
Sbjct: 1941 PNKTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGG 2000
Query: 718 FASGKSHNQKLYPSKDDYKTATLSGL 743
F G S N + + T L
Sbjct: 2001 FGFGSSSNTASFGTLASQNAPTFGSL 2026
Score = 45 (20.9 bits), Expect = 2.6e-05, Sum P(6) = 2.6e-05
Identities = 25/98 (25%), Positives = 42/98 (42%)
Query: 922 HTTMSSQIAAAEQLSDRLSKQMALLSIESPVKQQNVKKELFETLGIPYDASFSSPDVTKV 981
HT + Q AAA L +++ Q +S + +NV + + + S SP +
Sbjct: 1078 HTVAAPQAAAAAALRRQMASQAPAVSTLTESTLKNVP----QVVNVQELKSNPSPP-SAA 1132
Query: 982 MDQS---SIKKLIHSSGSAAANDQSRRRQSSAMKSYDP 1016
M S S K H+ + A Q++ Q S + S+ P
Sbjct: 1133 MGSSGPHSAAKAPHAVLTPVAASQAK--QGSLINSFKP 1168
Score = 43 (20.2 bits), Expect = 0.00049, Sum P(6) = 0.00048
Identities = 20/78 (25%), Positives = 31/78 (39%)
Query: 1177 SNSTLTNETKSTMQSESNIFQKPTISTMSPTLTPSLLKNPSEMPISN-GKGTVPESSTI- 1234
S ++ TN + S F P S + + PS+ + P+S T S+T+
Sbjct: 1348 SKASSTNLAGAQPAKPSG-FSFPAASVLGKPVEPSVTSSAPAAPVSALSASTSSSSATVF 1406
Query: 1235 GSEKHGAATTKTLFVESG 1252
GS +A L SG
Sbjct: 1407 GSVPLTSAAPSGLMSFSG 1424
Score = 39 (18.8 bits), Expect = 0.00014, Sum P(6) = 0.00014
Identities = 23/67 (34%), Positives = 28/67 (41%)
Query: 640 LPSSHSHEKTYENSSLG-APNVSGSFVGKPL-------SSKDATGSLTPVFSAKPVHGDG 691
LPS+ + S G +P S S G+P SS+ A S TP FS P G
Sbjct: 470 LPSAGGGPSVF---SFGPSPFKSSSIPGEPPPYPTGSDSSRAAPASGTPTFSFAPP-SKG 525
Query: 692 DRASTGA 698
A T A
Sbjct: 526 TLAPTPA 532
Score = 38 (18.4 bits), Expect = 2.6e-05, Sum P(6) = 2.6e-05
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 843 DSRYWDLWNRQKLSPELELKRGHILSINQDL------INQLIELE--RH 883
DS Y L ++ L P+ E + I ++Q + +N +++LE RH
Sbjct: 787 DSGYLHLLYKRPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDRH 835
>POMBASE|SPBC215.13 [details] [associations]
symbol:SPBC215.13 "sequence orphan" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0009986 "cell surface"
evidence=NAS] [GO:0031225 "anchored to membrane" evidence=IEA]
PomBase:SPBC215.13 GO:GO:0005783 GO:GO:0005886 GO:GO:0009986
GO:GO:0031225 EMBL:CU329671 PIR:T39903 RefSeq:NP_596690.1
ProteinModelPortal:O94317 EnsemblFungi:SPBC215.13.1 GeneID:2540669
KEGG:spo:SPBC215.13 eggNOG:opiNOG43420 OMA:NPTDVTS NextBio:20801793
Uniprot:O94317
Length = 534
Score = 139 (54.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 85/411 (20%), Positives = 159/411 (38%)
Query: 873 LINQLIELERHFNSLELNKFGENDGVHGCQRRPQSRF-GTSRHIQSLHSLHTTMSSQIAA 931
L++Q+ F + LN+ D QRR + R+ G + + + + ++
Sbjct: 24 LVHQIYG-NSSFTKISLNQLEGRDSQEELQRRQEIRYYGRAAETGGTPTYYGYATPTSSS 82
Query: 932 AEQLSDRLSKQMALLSIESPVKQQN--VKKELFETLGI--PYDASF--SSPDVTKVMDQS 985
+ + S SPV + +L + P + + SS + + ++D S
Sbjct: 83 EPSIFSESATPSETNSYSSPVSSYSDPATSQLPSSTSFFSPTSSEYTPSSTESSSLLDPS 142
Query: 986 SIKKLIHSSGSAAANDQSRRRQSSAMKSYDPETARRRRDSLDRSWASFEPPKTTVKRMLL 1045
S+ I S ++ S SS++ S DP T+ SL S +S +P ++
Sbjct: 143 SVSSAILPSSTSVEVSIS----SSSLSSSDPLTSSTF-SSLSSSTSSSQPSVSSTSSSTF 197
Query: 1046 QDHQKCSQVKSSLKDKQQISPHMLEGAAIVRPKDRTTPSTSWNPLRIKGLQDASLKQTSE 1105
S S L +S ++ ++ STS P S +S
Sbjct: 198 SSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSS 257
Query: 1106 SQSTLFKWAGDPTG--PSQMTGLKSPVFQSNIASTRSSLSATQLSPMGWQNHARNTGDVT 1163
S S+ + + S + SP S+ S+ SS S++ S + + ++
Sbjct: 258 SSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSF 317
Query: 1164 AEKLSSGVYFDVKSNSTLTNETKSTMQSESNIFQKPTISTMSPTLTPSLLKNPSEMPISN 1223
+ LSS S S+ + ST+ S S+ P+ S+ S T + S + +S+
Sbjct: 318 SSTLSSSSMSSSSSFSSSPTSSSSTISSSSS---SPSSSSFSSTTSSSKSSSSFSSTVSS 374
Query: 1224 GKGTVPE---SSTIGSEKHGAATTKTLFVESGKNRDAQVSTPAAVPTSSAF 1271
T SS+ S + ++++ + + S K+ + S+ A P SSAF
Sbjct: 375 SSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKSSSA--PVSSAF 423
>WB|WBGene00013498 [details] [associations]
symbol:Y70G10A.2 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 PROSITE:PS50026 SMART:SM00034 SMART:SM00181
GO:GO:0030246 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
eggNOG:NOG12793 EMBL:AL032660 GeneTree:ENSGT00700000104174
RefSeq:NP_499266.2 ProteinModelPortal:Q9XWC4 SMR:Q9XWC4
EnsemblMetazoa:Y70G10A.2 GeneID:190572 KEGG:cel:CELE_Y70G10A.2
UCSC:Y70G10A.2 CTD:190572 WormBase:Y70G10A.2 InParanoid:Q9XWC4
OMA:DWIYANG Uniprot:Q9XWC4
Length = 1489
Score = 153 (58.9 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 97/377 (25%), Positives = 149/377 (39%)
Query: 923 TTMSSQIAAAEQLSDRLSKQMALLSIESPVKQQNVKKE-LFETLGIPYDASFSSPDVTKV 981
+T+SS ++ S LS + I SP Q +K TLG +S +K
Sbjct: 282 STVSSTSSSGSSRSSTLSSDTSP-RITSPFTQATSQKSSTTTTLGSSKSLPTNSSSNSKT 340
Query: 982 MDQSSIKKLIHSSGSAAANDQSRRRQSSAMKSYDPETARRRRDSLDRSWASFEPPKTTVK 1041
++ +S S+ A D S + S S T+ R S+ + + +TT+K
Sbjct: 341 RTTTTTTTQ-STSASSGATDSSSKSTGSTSSSGSSGTSGRTSSSVTETSTT---KQTTIK 396
Query: 1042 RMLLQDHQKCSQVKSSLKDKQQISPHMLEGAAIVRPKDRTTPSTSWNPLRIKGLQDASLK 1101
+ + + SQ SS DK ISP L G+ P T + + AS K
Sbjct: 397 -VSTKVSPQTSQRSSS--DKTSISPSTLTGST---SSTTIIPVTDLSTAQSSSSTSASTK 450
Query: 1102 QTSES--QSTLFKWAGDPTGPSQMTGLKSPVFQSNIASTRSSLSATQLSPMGWQNHARNT 1159
+S S Q + TG +T S +++ ++TRSS +T P G++ +
Sbjct: 451 LSSFSSTQRATHSISSSTTG---ITETSSETSETSKSTTRSSKPSTSGLP-GYEIFPPD- 505
Query: 1160 GDV-TAEKLSSGVYFDVKSNSTLTNETK---STMQSESNIFQKPTISTMS--PTLTPSLL 1213
DV T G +S T T ET +T +S N ST S P P+
Sbjct: 506 -DVFTRSSEPPGTTKTTESTMTTTAETSGDTTTFKSNENSATNTRSSTESTEPVTKPNTE 564
Query: 1214 KNPSEMPISNGKGTVPESSTIGSEKHGAATTKTLFVESGKNRDAQVSTPAAVPTS---SA 1270
K+ S + + K T +T S+ ++T T + SG D + S PA S S
Sbjct: 565 KSSSTSVLPSDKTTSIPDTTENSKSSKTSSTTTTTLPSGSTSDVKPSWPATSKLSTQGST 624
Query: 1271 FPGIVPIF--DAANKSQ 1285
P +P D + SQ
Sbjct: 625 SPASIPTISLDQPSSSQ 641
Score = 38 (18.4 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 31/132 (23%), Positives = 49/132 (37%)
Query: 640 LPSSHSHEKTYENSSLG-APNVSGSFVGK-PL-SSKDATGSLTPVFSAKPVHGDGDRAST 696
L +S S T +SS A + + G P SS+D T S + S + G + ST
Sbjct: 157 LETSASTTSTSSSSSTSFATSTTSKTTGSTPTTSSEDLTRSTSTSGSIQST-GSSSKTST 215
Query: 697 GAGKIE-------SLPSVRSSQFSLPQNFASGKSHNQKLYPSKDDYKTATLSGLPNSEPN 749
+ S S SSQ S P + + + + T + P ++ +
Sbjct: 216 DKSTLTENTTSSISKSSSGSSQMSKPSSTTTASTAVLSTISHSSTPPSETPTSSPTTDLS 275
Query: 750 LSKQSGNIKEMT 761
S SG+ T
Sbjct: 276 KSTTSGSTVSST 287
>FB|FBgn0036203 [details] [associations]
symbol:Muc68D "Mucin 68D" species:7227 "Drosophila
melanogaster" [GO:0016490 "structural constituent of peritrophic
membrane" evidence=ISS] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0008061 "chitin binding" evidence=IEA]
[GO:0006030 "chitin metabolic process" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=ISM] [GO:0005201 "extracellular
matrix structural constituent" evidence=ISM] InterPro:IPR002557
Pfam:PF01607 PROSITE:PS50940 SMART:SM00494 GO:GO:0005576
EMBL:AE014296 eggNOG:NOG12793 GO:GO:0031012 GO:GO:0008061
GO:GO:0005201 CAZy:CBM14 Gene3D:2.170.140.10 SUPFAM:SSF57625
GO:GO:0006030 GeneTree:ENSGT00700000104174 EMBL:AY075323
RefSeq:NP_648504.2 UniGene:Dm.20068 SMR:Q9VTN2 MINT:MINT-900668
STRING:Q9VTN2 EnsemblMetazoa:FBtr0076119 GeneID:39326
KEGG:dme:Dmel_CG6004 UCSC:CG6004-RB CTD:39326 FlyBase:FBgn0036203
InParanoid:Q9VTN2 OMA:STESSQD OrthoDB:EOG4WSTSF GenomeRNAi:39326
NextBio:813085 Uniprot:Q9VTN2
Length = 1514
Score = 147 (56.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 92/387 (23%), Positives = 153/387 (39%)
Query: 911 TSRHIQSLHSLHTTMSSQIAAAEQLSDRLSKQMALLSIESPVKQQNVKKELFETLGIPYD 970
T ++ + +T SSQ + ++ S S LS ES + N +
Sbjct: 452 TESSTEATNESSSTESSQDSTTQESS---SSTEGPLSTESSTEATNESSSTESSQDSTTQ 508
Query: 971 ASFSSPDVTKVMDQSSIKKLIHSSGSAAANDQSRRRQSSAMKS---YDPETARRRRDSLD 1027
S SS + + +SS + SS + ++ D + + SS+ +S +P T S +
Sbjct: 509 ESSSSSE-GPLSTESSTEATNESSSTESSQDSTTQESSSSTESPLSTEPSTEANESSSTE 567
Query: 1028 RSWASF--EPPKTTVKRMLLQDHQKCSQVKSSLKDKQQISPHMLEGAAIVRPKDRTTPST 1085
S S E +T + + + + SS + Q + E ++ T ST
Sbjct: 568 SSQDSTTQESSSSTEDPLSTESSTEATNESSSTESSQDSTTQ--ESSSSTEGPLSTESST 625
Query: 1086 --SWNPLRIKGLQDASLKQTSES-QSTLFKWAGDPTGPSQMT-GLKSPVFQSNIASTRSS 1141
S + QD++ +++S S +S L S T + Q + +ST
Sbjct: 626 EGSNESSSTESSQDSTTQKSSSSTESPLSTEPSTEANESSSTESSQDSTTQESSSSTEGP 685
Query: 1142 LSATQLSPMGWQNHARNTGDVTAEKLSSGVYFDVKS-NSTLTNETKSTMQSESNIFQKPT 1200
LS + + ++ D T ++ SS + + +ST NE+ ST S+ + Q+ +
Sbjct: 686 LSTEPSTEANESSSTESSQDSTTQESSSSSEGPLSTESSTEANESSSTESSQDSTTQESS 745
Query: 1201 ISTMSPTLT-PSLLKNPSEMPISNGKGTVPESSTIGSEKHGAATTK--TLFVESGKNRDA 1257
ST SP T PS N S S+ T ESS S G +T+ T ES +
Sbjct: 746 SSTESPLSTEPSTEANESSSTESSQDSTTQESS---SSTEGPLSTEPSTEANESSSTESS 802
Query: 1258 QVSTPAAVPTSSAFPGIVPIFDAANKS 1284
Q ST +SS P AN+S
Sbjct: 803 QDSTTQESSSSSEGPLSTESSTEANES 829
Score = 38 (18.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 105 ENENVDILSLSNDESTLAVSLYQSPHI 131
+ + DI+S S+D S + Y S +
Sbjct: 153 DKDKKDIISSSSDSSPTEDATYSSTQV 179
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.129 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1324 1206 0.00097 123 3 11 23 0.46 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 635 (67 KB)
Total size of DFA: 519 KB (2238 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 123.18u 0.28s 123.46t Elapsed: 00:00:11
Total cpu time: 123.19u 0.28s 123.47t Elapsed: 00:00:11
Start: Tue May 21 04:02:39 2013 End: Tue May 21 04:02:50 2013