BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000734
(1324 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04251|Y4211_ARATH BRCT domain-containing protein At4g02110 OS=Arabidopsis thaliana
GN=At4g02110 PE=1 SV=3
Length = 1329
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 182/300 (60%), Positives = 225/300 (75%)
Query: 946 VGSSDEVEKENRPVADEGQTSSPGVGKSILKSMKVSMKNKIGGNVNSNSIPLDKSLNKLD 1005
VG + EKEN V +E + G +S + KV+ K G S L +
Sbjct: 1028 VGDNSAKEKENIAVDNESRKVGSGGDQSPVARKKVAKSAKTGTKAEKESKQLRVNPLASR 1087
Query: 1006 KSLNKLKDEPIWFILSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPEIRRTEK 1065
K + EP +FI+SG R QR E+Q +IR LKG+ CRDSHQWSYQATHFIAPEIRRTEK
Sbjct: 1088 KVFQDQEHEPKFFIVSGPRSQRNEYQQIIRRLKGKCCRDSHQWSYQATHFIAPEIRRTEK 1147
Query: 1066 FFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERT 1125
FFAAAASG WILKTDY++ +AGK L EEPYEWH +GLS DGAINLE+P+KWRL+RE+T
Sbjct: 1148 FFAAAASGSWILKTDYVADSKEAGKLLQEEPYEWHSSGLSADGAINLESPKKWRLVREKT 1207
Query: 1126 GHGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRFLNSGVDFAVVSPGMP 1185
GHGA +G+RI+VYGDC P LDTLKR VKAGDG ILAT+PPYTRFLN DFA++SPGMP
Sbjct: 1208 GHGALYGLRIVVYGDCTIPCLDTLKRAVKAGDGTILATAPPYTRFLNQNTDFALISPGMP 1267
Query: 1186 RVDLWVQEFLKHEIPCVVADYLVEFVCKPGYSLERHVQYNTHAWAEKSLSNLLSKAEEIV 1245
R D+W+QEF++HEIPCV++DYLVE+VCKPGY+L++HV YNT++WAEKS + + +A+ V
Sbjct: 1268 RDDVWIQEFIRHEIPCVLSDYLVEYVCKPGYALDKHVLYNTNSWAEKSFNKMQLRADLCV 1327
Score = 355 bits (911), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 275/760 (36%), Positives = 391/760 (51%), Gaps = 120/760 (15%)
Query: 8 KPFIGVRFVLFGFDPINERQVRSKLIDGGGVDVGLYTQSCTHVIVDKIVFDDSVCVAART 67
K + GV+F L GF+PI+ +RSKL+ GGGVDVG +TQSCTH+IVDK+++DD +CVAAR
Sbjct: 10 KTYSGVKFALVGFNPIHGNSLRSKLVSGGGVDVGQFTQSCTHLIVDKLLYDDPICVAARN 69
Query: 68 DGKTLVTSLWVDHSLDIGMPVDAASIMYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMT 127
GK +VT WVDHS DIGM +A SI+YRPL+DLNGI G+ +LV+CLTGYQ DREDIM
Sbjct: 70 SGKVVVTGSWVDHSFDIGMLDNANSILYRPLRDLNGIPGSKALVVCLTGYQGHDREDIMR 129
Query: 128 LVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLVNHRWLEDCLRVWELLPE 187
+V LMG QFSKPLVAN+VTHLICYKFEGEKYELAK+IK IKLVNHRWLEDCL+ W+LLPE
Sbjct: 130 MVELMGGQFSKPLVANRVTHLICYKFEGEKYELAKRIKRIKLVNHRWLEDCLKNWKLLPE 189
Query: 188 VNYDKSGYELETMEAEAKDSEEEIEVASLKQFGGRDVNKSPHNLNVGIINAHESPKSTLE 247
V+Y+ SGYEL+ MEA A+DSE+E E AS+K N SP L VG + A E K
Sbjct: 190 VDYEISGYELDIMEASARDSEDEAEDASVKP-----ANTSPLGLRVGAVPAVEISKPG-- 242
Query: 248 GQGLLVGSTIP--EASSGIDNATDMLSTPSRVSRSHQISGFDNVNITEVNGCHYTGASRD 305
G P E SS + + D TP R R + ++ + + + +Y R
Sbjct: 243 ------GKDFPLEEGSSLCNTSKDNWLTPKRTDRPFEAMVSTDLGVAQQH--NYVSPIRV 294
Query: 306 NSHEKTPNSAKVKSDLVPTSKNAEISYHSGSKFCSLNYSRKTPRKSILTMSSGK------ 359
+ +K+++D TS N I HS YSRKT ++S T + GK
Sbjct: 295 ANKTPEQGMSKMETD-GSTSINRSIRRHS----SLATYSRKTLQRSPETDTLGKESSGQN 349
Query: 360 ----VDN------DVLNIISSKVENAETRT--VTACGEIPKRGGELCHEEE-SIVLPQKR 406
+D+ N +SK ++ RT G+I ++ H EE ++PQ +
Sbjct: 350 RSLRMDDKGLKASSAFNTSASKSGSSMERTSLFRDLGKI-----DMLHGEEFPPMMPQAK 404
Query: 407 MSNSTGAGSKSQKMSHNA------------AECNPRSPINYKTPVSETKSSACHSFETGN 454
++ + + S ++ HN+ E P SP + PV S S E G
Sbjct: 405 FTDGSVSRKDSLRVHHNSEASIPPPSSLLLQELRPSSPNDNLRPVMSI-SDPTESEEAG- 462
Query: 455 HLSPGSNGHYTIETATPSTAPNKKPLTPDLPSLKTVTS--------EALHSEGADRNAL- 505
H SP T E T + N P+ L + + + S E +E N L
Sbjct: 463 HKSP------TSELNTKLLSSNVVPMVDALSTAENIISNCAWDEIPEKSLTERMTENVLL 516
Query: 506 -ETCRGSKESTV---------ASKTDNED-----FGMGSVHLDGEAEDAQNLHQDLEGSS 550
E GS + + A + D D F G V ++ + +N ++G+
Sbjct: 517 QEQRSGSPKQNLSVVPNLREAAHELDLSDSAARLFNSGVVPMEADIRTPEN--STMKGA- 573
Query: 551 AKNRFLVMDKSPRPVNID--------SPQVG----KDKLIAKPIRKKMVAKKAFGS---- 594
+D+ P D SP G KDK + KK KK+ G+
Sbjct: 574 -------LDEVPERSVTDPVMRRSSTSPGSGLIRMKDKQETELTTKKTAPKKSLGTRGRK 626
Query: 595 GHTTNRKGSIYSNKISSLSSPAVCLSREVERANQEKFSSTSELETDPPNLSDEATKEMET 654
+ N+KGSIY ++ S VCL++ + + ++++ E P L+ E ++M
Sbjct: 627 KNPINQKGSIYLSEPSPTDERNVCLNK--GKVSAPVTGNSNQKEISSPVLNTEVVQDMAK 684
Query: 655 TLVAKCGDNSGDGIKTMDDETEAPDEKYEIEFEKMLNNEK 694
+ + + GI ++D+++ AP+EK + + M+N +K
Sbjct: 685 HIDTET--EALQGIDSVDNKSLAPEEKDHLVLDLMVNQDK 722
>sp|Q7ZZY3|TOB1B_XENLA DNA topoisomerase 2-binding protein 1-B OS=Xenopus laevis GN=topbp1-B
PE=2 SV=1
Length = 1513
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 1026 QRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPEIRRTEKFFAAAASGRWILKTDYLSAC 1085
+R ++ +I L G + + + TH + R EK+ A+ A+G+W+L YL AC
Sbjct: 1272 ERIDYSQLIEELGGVVI-EKQCFDPSCTHIVVGHPLRNEKYLASMAAGKWVLHRSYLEAC 1330
Query: 1086 SQAGKFLLEEPYEWHKNG-LSEDGAIN------LEAPRKWRL----LRERTG--HGAFHG 1132
A +F+ EE YEW LS IN EA +WR +++ G GAF G
Sbjct: 1331 RAAKRFIQEEDYEWGSMSILSAVTNINPQQRMLAEAAMRWRKKLQGIKQNMGIAEGAFSG 1390
Query: 1133 MRIIVYGDCIAPPLDTLKRVVKAGDGNILA--TSPPYTRFLNSGVDFAVVSPGMPRVDLW 1190
++I+ D P KR++++G + A +SP + + DF+ + P PRV+
Sbjct: 1391 WKVILNVDQTKEP--GFKRLLQSGGAKVFAGHSSPLFKEASHLFADFSKLKPDEPRVN-- 1446
Query: 1191 VQEFLKHEIPCVVADYLVEFVCK 1213
V E + C+ +Y+ +++ K
Sbjct: 1447 VAEAAAQGVNCLKPEYIADYLMK 1469
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 14/91 (15%)
Query: 112 MCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLVN 171
+C+TG DR+++ L L G +++ L N+ THLI + +G+KYE A+K
Sbjct: 204 ICVTGLSSLDRKEVQRLTALHGGEYTGQLKMNESTHLIVQEAKGQKYECARK-------- 255
Query: 172 HRWLEDCLRVWELLPEVN----YDKSGYELE 198
W+ C+ V + D++ Y++E
Sbjct: 256 --WIVHCISVQWFFDSIEKGFCQDETMYKIE 284
Score = 42.0 bits (97), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 10 FIGVRFVLFGFDPINERQVRSKLIDGGGVDVGLYTQSCTHVIVDKIVFDDSVCVAARTDG 69
F +F++ GF +E + +ID G S I D V C T G
Sbjct: 541 FSRKQFMVLGFLEEDE----ACIIDIRKKSAGKVLSSQKRAIADYAVVPLLGCEVESTVG 596
Query: 70 KTLVTSLWVDHSLDIGMPVDAAS-IMYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTL 128
+ +VT+ W+ ++ +D S ++ P+ L G V+ ++ + +R+ ++ L
Sbjct: 597 E-VVTNAWLGMCIEQEKLLDPHSNALFTPVPFLEGSTPLRECVLSVSQFMGAERDSLVYL 655
Query: 129 VRLMGSQFSKPLV--AN------KVTHLICYKFEGEKYELAKKIKSIKLVNHRWLEDCLR 180
L+G++ + V AN +HL EG KYE AKK ++ V WL C R
Sbjct: 656 AGLLGAKVQEFFVRKANPKKGMFARSHLDLKDAEGSKYEAAKKW-NLPAVTMNWLLQCAR 714
Query: 181 VWELLPEVNYDKSGYELETMEAEAKD 206
+ D+ Y ++ + E KD
Sbjct: 715 TGK-----KADEDSYLVDNVPEEDKD 735
>sp|Q800K6|TOB1A_XENLA DNA topoisomerase 2-binding protein 1-A OS=Xenopus laevis GN=topbp1-A
PE=1 SV=2
Length = 1513
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 1026 QRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPEIRRTEKFFAAAASGRWILKTDYLSAC 1085
+R ++ +I L G + + + TH + R EK+ A+ A+G+W+L YL AC
Sbjct: 1272 ERIDYSQLIEELGGVVI-EKQCFDPSCTHIVVGHPLRNEKYLASMAAGKWVLHRSYLEAC 1330
Query: 1086 SQAGKFLLEEPYEWHKNG-LSEDGAIN------LEAPRKWRL----LRERTG--HGAFHG 1132
A +F+ EE YEW LS IN EA +WR +++ G GAF G
Sbjct: 1331 RAAKRFIQEEDYEWGSMSILSAVTNINPQQRMLAEAAMRWRKKLQGIKQNMGIAEGAFSG 1390
Query: 1133 MRIIVYGDCIAPPLDTLKRVVKAGDGNILA--TSPPYTRFLNSGVDFAVVSPGMPRVDLW 1190
++I+ D P KR++++G + A +SP + + DF+ + P PRV+
Sbjct: 1391 WKVILNVDQTKEP--GFKRLLQSGGAKVFAGHSSPLFKEASHLFADFSKLKPDEPRVN-- 1446
Query: 1191 VQEFLKHEIPCVVADYLVEFVCK 1213
V E + C+ +Y+ +++ K
Sbjct: 1447 VAEAAAQGVNCLKPEYIADYLMK 1469
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 112 MCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLVN 171
+C+TG DR+++ L L G +++ L N+ THLI + +G+KYE A+K ++ ++
Sbjct: 204 ICVTGLSSLDRKEVQRLTALHGGEYTGQLKMNESTHLIVQEAKGQKYECARKW-NVHCIS 262
Query: 172 HRWLEDCL 179
+W D +
Sbjct: 263 VQWFFDSI 270
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 10 FIGVRFVLFGFDPINERQVRSKLIDGGGVDVGLYTQSCTHVIVDKIVFDDSVCVAARTDG 69
F +F++ GF +E + +ID G S I D V C T G
Sbjct: 541 FSRKQFMVLGFLEEDE----ACIIDIIKKSAGKVLSSQKRAIADYAVVPLLGCEVESTVG 596
Query: 70 KTLVTSLWVDHSLDIGMPVDAAS-IMYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTL 128
+ +VT+ W+ ++ +D S ++ P+ L G V+ ++ + +R+ ++ L
Sbjct: 597 E-VVTNAWLGMCIEQEKLLDPHSNALFTPVPFLEGSTPLRECVLSVSQFMGAERDSLVYL 655
Query: 129 VRLMGSQFSKPLV--AN------KVTHLICYKFEGEKYELAKKIKSIKLVNHRWLEDCLR 180
L+G++ + V AN THL+ EG KYE AKK ++ V WL C R
Sbjct: 656 AGLLGAKVQEFFVRKANPKKGMFASTHLVLKDAEGSKYEAAKKW-NLPAVTMNWLLQCAR 714
Query: 181 VWELLPEVNYDKSGYELETMEAEAKD 206
D+ Y ++ + E KD
Sbjct: 715 TGR-----KADEDSYLVDNVPEEDKD 735
>sp|A6QR20|ANR32_BOVIN Ankyrin repeat domain-containing protein 32 OS=Bos taurus GN=ANKRD32
PE=2 SV=2
Length = 1055
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 1053 THFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINL 1112
TH IA + ++EKF AA A+G+W+L DY+ +Q+G++L E YEW + +D +
Sbjct: 44 THLIAERLCKSEKFLAACAAGKWVLTKDYIIHSAQSGRWLDETTYEW-GYKIEKDSHYSP 102
Query: 1113 E---APRKWRLLRERTGH-GAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNIL 1161
+ AP++WR +RTG GAFH ++++ D+L RV++AG N++
Sbjct: 103 QMQSAPKRWREELKRTGAPGAFHKWKVVLLVRADKRS-DSLVRVLEAGKANVI 154
>sp|Q8R3P9|ANR32_MOUSE Ankyrin repeat domain-containing protein 32 OS=Mus musculus
GN=Ankrd32 PE=2 SV=3
Length = 1054
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 25/215 (11%)
Query: 1020 LSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQ-ATHFIAPEIRRTEKFFAAAASGRWILK 1078
++G +++ KE +++ L C Y+ TH IA + ++EKF AA A+G+W+L
Sbjct: 12 MTGFKMEEKE--ALVKLLLKLDCTFIKSEKYKNCTHLIAERLCKSEKFLAACAAGKWVLT 69
Query: 1079 TDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLE---APRKWRLLRERTGH-GAFHGMR 1134
DY+ +++G++L E YEW + +D + + AP++WR +RTG GAFH +
Sbjct: 70 KDYIIHSAKSGRWLDETTYEW-GYKIEKDSHYSPQMQSAPKRWREELKRTGAPGAFHRWK 128
Query: 1135 IIVYGDCIAPPLDTLKRVVKAGDGN-ILATSPPYTRFLNSGVDFAVVSPGMPRVDLWVQE 1193
+++ D+L RV++AG N IL + P SG+ + S + +
Sbjct: 129 VVLLVRADKRS-DSLVRVLEAGKANVILPKNSP------SGITHVIASNARISAEREQEN 181
Query: 1194 FLKHEIPCVVADYLVEFVCKPGYSLERHVQYNTHA 1228
F + P YL +F+ LE+ +Q + H+
Sbjct: 182 F---KAPFYPIQYLGDFL------LEKEIQNDEHS 207
>sp|Q9BQI6|ANR32_HUMAN Ankyrin repeat domain-containing protein 32 OS=Homo sapiens
GN=ANKRD32 PE=1 SV=2
Length = 1058
Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 17/186 (9%)
Query: 1053 THFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINL 1112
TH IA + ++EKF AA A+G+WIL DY+ +++G++L E YEW + +D +
Sbjct: 44 THLIAERLCKSEKFLAACAAGKWILTKDYIIHSAKSGRWLDETTYEW-GYKIEKDSRYSP 102
Query: 1113 E---APRKWRLLRERTGH-GAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGN-ILATSPPY 1167
+ AP++WR +RTG GAFH ++++ D+L RV++AG N IL S P
Sbjct: 103 QMQSAPKRWREELKRTGAPGAFHRWKVVLLVRTDKRS-DSLIRVLEAGKANVILPKSSP- 160
Query: 1168 TRFLNSGVDFAVVSPGMPRVDLWVQEFLKHEIPCVVADYLVEFVCKPGYSLERHVQYNTH 1227
SG+ + S + + +E + P YL +F+ + + Q N+
Sbjct: 161 -----SGITHVIASNARIKAE---KEKDNFKAPFYPIQYLGDFLLEKEIQNDEDSQTNS- 211
Query: 1228 AWAEKS 1233
W E S
Sbjct: 212 VWTEHS 217
>sp|Q6ZQF0|TOPB1_MOUSE DNA topoisomerase 2-binding protein 1 OS=Mus musculus GN=Topbp1 PE=1
SV=2
Length = 1515
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 28/234 (11%)
Query: 996 PLDKSLNKLDKSLNKLKDEPIWFILSGHRLQRKEFQVVIRHLKGRL----CRDSHQWSYQ 1051
P DK + +++ K+K + ++ + S + +R ++ +I+ L G + C D
Sbjct: 1246 PADK-IETQEETHRKVKKQYVFQMSSLNSQERIDYCRLIKDLGGSVIEKQCSDP-----S 1299
Query: 1052 ATHFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGL------- 1104
TH + R EK+ A+ A+G+W+L YL AC AG+F+ EE YEW + +
Sbjct: 1300 CTHMVVGYPLRNEKYLASMAAGKWVLHRSYLDACKTAGRFVQEEDYEWGSSSILDALPDV 1359
Query: 1105 SEDGAINLEAPRKWRLLRERTG-----HGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGN 1159
+E A +WR +++ GAF G + I+ D P KR+++AG
Sbjct: 1360 TEHQQKLALAAMRWRKRIQQSQESGIVEGAFSGWKAILRVD--RPREAGFKRLLQAGGAK 1417
Query: 1160 ILATSP-PYTR-FLNSGVDFAVVSPGMPRVDLWVQEFLKHEIPCVVADYLVEFV 1211
+L+ P P + + DF + P RV ++ E + C+ +Y+ +++
Sbjct: 1418 VLSGHPEPLLKDATHLFCDFNKLKPDDCRV--FIAEATAQNMVCLKTEYIADYL 1469
Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 15/176 (8%)
Query: 15 FVLFGFDPINERQVRSKLIDGGGVDVGLYTQSCTHVIVDKIVFDDSVCVAARTDGKTLVT 74
F++ GF N+ + + + G V L ++ ++ D V C T G+ +VT
Sbjct: 561 FLVLGFSVENKCNIVDIIREHAGKIVSLPSR----IVADYAVVPLLGCEVDVTVGE-VVT 615
Query: 75 SLWVDHSLDIGMPVDAAS-IMYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMG 133
+ W+ +D VD S ++ P+ ++G+ V+ + +R+ ++ L +G
Sbjct: 616 NTWLVTCIDNQTLVDPKSNPLFTPVSVMSGVTPLEDCVISFSQCVGAERDSLVFLANHLG 675
Query: 134 SQFSKPLV--ANK------VTHLICYKFEGEKYELAKKIKSIKLVNHRWLEDCLRV 181
+ + V AN THLI + G KYE AKK S+ VN WL + R+
Sbjct: 676 ASVQEFFVRKANAKKGMLASTHLIVKEPTGSKYEAAKKW-SLPAVNISWLLETARI 730
Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 111 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 170
++C+TG R+ + L G Q+ L N+ THLI + +G+KYE A++ ++ V
Sbjct: 204 IICVTGLNGIHRKTVQQLTAKHGGQYMGQLKMNECTHLIVQEPKGQKYECARRW-NVHCV 262
Query: 171 NHRWLEDCL 179
+W D +
Sbjct: 263 TLQWFHDSI 271
>sp|Q92547|TOPB1_HUMAN DNA topoisomerase 2-binding protein 1 OS=Homo sapiens GN=TOPBP1 PE=1
SV=3
Length = 1522
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 106/222 (47%), Gaps = 19/222 (8%)
Query: 1004 LDKSLNKLKDEPIWFILSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPEIRRT 1063
++++ +LK + I+ + S + +R ++ +I L G L + + TH + R
Sbjct: 1257 IEETHEELKKQYIFQLSSLNPQERIDYCHLIEKLGG-LVIEKQCFDPTCTHIVVGHPLRN 1315
Query: 1064 EKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNG-LSEDGAINLEAPR------ 1116
EK+ A+ A+G+W+L YL AC AG F+ EE YEW + L IN++ R
Sbjct: 1316 EKYLASVAAGKWVLHRSYLEACRTAGHFVQEEDYEWGSSSILDVLTGINVQQRRLALAAM 1375
Query: 1117 KWR---LLRERTG--HGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILA--TSPPYTR 1169
+WR R+ +G GAF G ++I++ D KR++++G +L + P +
Sbjct: 1376 RWRKKIQQRQESGIVEGAFSGWKVILHVD--QSREAGFKRLLQSGGAKVLPGHSVPLFKE 1433
Query: 1170 FLNSGVDFAVVSPGMPRVDLWVQEFLKHEIPCVVADYLVEFV 1211
+ D + P V+ + E + C+ +Y+ +++
Sbjct: 1434 ATHLFSDLNKLKPDDSGVN--IAEAAAQNVYCLRTEYIADYL 1473
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 111 VMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 170
++C+TG DR+++ L G Q+ L N+ THLI + +G+KYE AK+ ++ V
Sbjct: 204 IICVTGLCGLDRKEVQQLTVKHGGQYMGQLKMNECTHLIVQEPKGQKYECAKRW-NVHCV 262
Query: 171 NHRWLEDCL 179
+W D +
Sbjct: 263 TTQWFFDSI 271
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 20/206 (9%)
Query: 15 FVLFGFDPINERQVRSKLIDGGGVDVGLYTQSCTHVIVDKIVFDDSVCVAARTDGKTLVT 74
F++ GF NE + + + + G + L +++ + D V C T G+ +VT
Sbjct: 558 FLVLGFSNENESNIANIIKENAGKIMSLLSRT----VADYAVVPLLGCEVEATVGE-VVT 612
Query: 75 SLWVDHSLDIGMPVDAAS-IMYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMG 133
+ W+ +D D S ++ P+ + G+ V+ + ++E + L L+G
Sbjct: 613 NTWLVTCIDYQTLFDPKSNPLFTPVPVMTGMTPLEDCVISFSQCAGAEKESLTFLANLLG 672
Query: 134 SQFSKPLVANK--------VTHLICYKFEGEKYELAKKIKSIKLVNHRWLEDCLRVWELL 185
+ + V THLI + G KYE AKK ++ V WL + R +
Sbjct: 673 ASVQEYFVRKSNAKKGMFASTHLILKERGGSKYEAAKKW-NLPAVTIAWLLETARTGK-- 729
Query: 186 PEVNYDKSGYELETMEAEAKDSEEEI 211
D+S + +E E + E EI
Sbjct: 730 ---RADESHFLIENSTKEERSLETEI 752
>sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus
GN=Phrf1 PE=1 SV=2
Length = 1682
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 1257 DKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCTRSRI 1316
D C+ CG SDR + +L+C GC G H++C DPPL+ VP ++WFCP CT +
Sbjct: 184 DPTFCEVCGRSDREDRLLLCD------GCDAGYHMECLDPPLQEVPVDEWFCPECTVPGV 237
Query: 1317 NPS 1319
+P+
Sbjct: 238 DPT 240
>sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protein 1 OS=Rattus norvegicus
GN=Phrf1 PE=1 SV=2
Length = 1685
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 1261 CQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCTRSRINPS 1319
C+ CG SDR + +L+C GC G H++C DPPL+ VP ++WFCP C ++P+
Sbjct: 191 CEVCGRSDREDRLLLCD------GCDAGYHMECLDPPLQEVPVDEWFCPECAVPGVDPT 243
>sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens
GN=PHRF1 PE=1 SV=3
Length = 1649
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 1243 EIVMDLTPPNDYDTDKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVP 1302
+I ++ T ++ + D C+ CG SDR + +L+C GC G H++C DPPL+ VP
Sbjct: 168 KIPVENTKASEEEEDPTFCEVCGRSDREDRLLLCD------GCDAGYHMECLDPPLQEVP 221
Query: 1303 EEDWFCPTCT 1312
++WFCP C
Sbjct: 222 VDEWFCPECA 231
>sp|Q5XIY8|PAXI1_DANRE PAX-interacting protein 1 OS=Danio rerio GN=paxip1 PE=2 SV=1
Length = 943
Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Query: 33 IDGGGVDVGLYTQSCTHVIVDKIVFDDSVCVAARTDGKTLVTSLWVDHSLDIGMPVDAAS 92
++GG VD L CTH++ + V + + A +GK VT+ W++ L V
Sbjct: 698 LNGGTVDSAL--NRCTHLLCESQV--SNTYLQALREGKRCVTAHWLNTVLKKKKMVPPHR 753
Query: 93 IMYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYK 152
++ P G ++ +TG+ DR+D+ + L G++++ L + T LIC +
Sbjct: 754 TLHLPFSFPPGAKPCAQHIISVTGFVDSDRDDLKLMAYLAGARYTGYLCRSN-TVLICKE 812
Query: 153 FEGEKYELAKKIKSIKLVNHRWLEDCL 179
G KYE AK+ + I VN +WL D L
Sbjct: 813 PSGLKYEKAKEWR-IPCVNAQWLCDIL 838
>sp|Q8RXD4|BRCA1_ARATH Protein BREAST CANCER SUSCEPTIBILITY 1 homolog OS=Arabidopsis
thaliana GN=BRCA1 PE=2 SV=1
Length = 941
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 1045 SHQWSYQATHFIAP-----EIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEW 1099
S W TH IA +RT KF A G+WIL D++ AC + K++ EEPYE
Sbjct: 760 SKNWDSTVTHVIASINENGACKRTLKFMMAILEGKWILTIDWIKACMKNTKYVSEEPYE- 818
Query: 1100 HKNGLSEDGAINLEAPRKWRLLRERTGHGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGN 1159
++ D E P R + F G++ + GD L+ ++ A G
Sbjct: 819 ----ITMDVHGIREGPYLGRQRALKKKPKLFTGLKFYIMGDFELAYKGYLQDLIVAAGGT 874
Query: 1160 ILATSP 1165
IL P
Sbjct: 875 ILRRRP 880
>sp|Q6ZW49|PAXI1_HUMAN PAX-interacting protein 1 OS=Homo sapiens GN=PAXIP1 PE=1 SV=2
Length = 1069
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 7/166 (4%)
Query: 35 GGGVDVGLYTQSCTHVIVDKIVFDDSVCVAARTDGKTLVTSLWVDHSLDIGMPVDAASIM 94
GG VD +T CTH++ + V S A + K VT+ W++ L V +
Sbjct: 637 GGTVD-PTFTSRCTHLLCESQV--SSAYAQAIRERKRCVTAHWLNTVLKKKKMVPPHRAL 693
Query: 95 YRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFE 154
+ P+ G + ++ +TG+ DR+D+ + L G++++ L + T LIC +
Sbjct: 694 HFPVAFPPGGKPCSQHIISVTGFVDSDRDDLKLMAYLAGAKYTGYLCRSN-TVLICKEPT 752
Query: 155 GEKYELAKKIKSIKLVNHRWLEDCLR-VWELLPEVNYDK-SGYELE 198
G KYE AK+ + I VN +WL D L +E L ++ Y + + + L+
Sbjct: 753 GLKYEKAKEWR-IPCVNAQWLGDILLGNFEALRQIQYSRYTAFSLQ 797
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 110 LVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKL 169
+ CL+ +DR + LV G L K THLI + +GEKYE A K SIK+
Sbjct: 102 ITACLSQVSSEDRSALWALVTFYGGDCQLTL-NKKCTHLIVPEPKGEKYECALKRASIKI 160
Query: 170 VNHRWLEDCL 179
V W+ DC+
Sbjct: 161 VTPDWVLDCV 170
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 14/198 (7%)
Query: 978 MKVSMKNKIGGNVNSNSIPLDKS--LNKLDKSLNKLKDEPIWFIL-SGHR-LQRKEFQVV 1033
M + + K+ N +N P K + + KL E F+L +G +Q +++
Sbjct: 826 MSIRLPPKLKQNEVANVQPSSKRARIEDVPPPTKKLTPELTPFVLFTGFEPVQVQQYIKK 885
Query: 1034 IRHLKGRLCRDSHQWSYQATHFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLL 1093
+ L G + + + TH IA ++ RT KF A + + I+ ++L C + KF+
Sbjct: 886 LYILGGEVAESAQK----CTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFRCQKFID 941
Query: 1094 EEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHGAFHGMRIIVYGDCIAPPLDTLKRVV 1153
E+ Y + +LE K R + I P L T+K +V
Sbjct: 942 EQNYILRDAEAEVLFSFSLEESLK------RAHVSPLFKAKYFYITPGICPSLSTMKAIV 995
Query: 1154 KAGDGNILATSPPYTRFL 1171
+ G +L+ P + + +
Sbjct: 996 ECAGGKVLSKQPSFRKLM 1013
Score = 38.5 bits (88), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 15 FVLF-GFDPINERQVRSKLIDGGGVDVGLYTQSCTHVIVDKIV----FDDSVCVAARTDG 69
FVLF GF+P+ +Q KL GG +V Q CTH+I K+ F ++ V
Sbjct: 868 FVLFTGFEPVQVQQYIKKLYILGG-EVAESAQKCTHLIASKVTRTVKFLTAISVV----- 921
Query: 70 KTLVTSLWVDHSLDIGMPVDAASIMYR 96
K +VT W++ +D + + R
Sbjct: 922 KHIVTPEWLEECFRCQKFIDEQNYILR 948
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 112 MCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLVN 171
+ TG++ + + + ++G + ++ A K THLI K K + +I +V
Sbjct: 869 VLFTGFEPVQVQQYIKKLYILGGEVAE--SAQKCTHLIASKVT----RTVKFLTAISVVK 922
Query: 172 H----RWLEDCLRVWELLPEVNYDKSGYELETM 200
H WLE+C R + + E NY E E +
Sbjct: 923 HIVTPEWLEECFRCQKFIDEQNYILRDAEAEVL 955
>sp|Q6NZQ4|PAXI1_MOUSE PAX-interacting protein 1 OS=Mus musculus GN=Paxip1 PE=1 SV=1
Length = 1056
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 35 GGGVDVGLYTQSCTHVIVDKIVFDDSVCVAARTDGKTLVTSLWVDHSLDIGMPVDAASIM 94
GG VD +T CTH++ V S+ A + K VT+ W++ L + +
Sbjct: 624 GGTVD-PTFTSRCTHLLCASQV--SSMYTQALRERKRCVTAHWLNTVLKKKKLMPPHRAL 680
Query: 95 YRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFE 154
+ P+ G + ++ +TG+ DR+D+ + L G++++ L + T LIC +
Sbjct: 681 HFPVAFPPGGKPCSQHIISVTGFVDNDRDDLKLMAYLAGAKYTGYLCRSN-TVLICKEPS 739
Query: 155 GEKYELAKKIKSIKLVNHRWLEDCLR-VWELLPEVNYDK 192
G KYE AK+ + I VN +WL D L +E L +V Y +
Sbjct: 740 GLKYEKAKEWR-IPCVNAQWLGDILLGNFEALRQVQYSR 777
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 110 LVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKL 169
L CL+ +DR + LV G L K THLI + +GEKYE A K SIK+
Sbjct: 102 LTACLSQVSSEDRSALWALVTFHGGSCQLNL-NKKCTHLIVPEPKGEKYERAVKRTSIKI 160
Query: 170 VNHRWLEDCL 179
V W+ DC+
Sbjct: 161 VTPDWVLDCV 170
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 6/121 (4%)
Query: 1051 QATHFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAI 1110
+ TH IA ++ RT KF A + + I+ D+L C + F+ E+ Y +
Sbjct: 886 KCTHLIASKVTRTVKFLTAISVVKHIVTPDWLEECFKRQTFIDEQNYILRDAEAEVLFSF 945
Query: 1111 NLEAPRKWRLLRERTGHGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRF 1170
+LE K R + I P L T+K +V+ G +LA P + +
Sbjct: 946 SLEESLK------RAHVSPLFKTKYFYITPGICPSLATMKAIVECAGGKVLAKQPSFRKL 999
Query: 1171 L 1171
+
Sbjct: 1000 M 1000
>sp|Q9HDV4|LID2_SCHPO Lid2 complex component lid2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=lid2 PE=1 SV=1
Length = 1513
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 1261 CQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1311
C+ CG E +L+C GC H C DPPL S+P+EDW+C C
Sbjct: 271 CEYCGLDKNPETILLCD------GCEAAYHTSCLDPPLTSIPKEDWYCDAC 315
>sp|A0JNA8|PAXI1_BOVIN PAX-interacting protein 1 OS=Bos taurus GN=PAXIP1 PE=2 SV=1
Length = 984
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 72/145 (49%), Gaps = 5/145 (3%)
Query: 35 GGGVDVGLYTQSCTHVIVDKIVFDDSVCVAARTDGKTLVTSLWVDHSLDIGMPVDAASIM 94
GG VD ++ CTH++ + V + A + K +T+ W++ L V +
Sbjct: 552 GGAVD-PTFSSRCTHLLCESQV--SGLFAQAMKERKRCITAHWLNTVLKKKKLVPPHRAL 608
Query: 95 YRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFE 154
+ P+ G + ++ +TG+ DR+D+ + L G++++ L + T LIC +
Sbjct: 609 HFPVAFPPGGKPCSQHIISVTGFVDNDRDDLKLMAYLAGAKYTGYLCRSN-TVLICREPT 667
Query: 155 GEKYELAKKIKSIKLVNHRWLEDCL 179
G KYE AK+ + I VN +WL D L
Sbjct: 668 GLKYEKAKEWR-IPCVNAQWLGDIL 691
Score = 42.7 bits (99), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Query: 1051 QATHFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAI 1110
+ TH IA ++ RT KF A + + I+ ++L C + KF+ E+ Y +
Sbjct: 814 KCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFKCQKFVDEQNYLLRDAEAEVLFSF 873
Query: 1111 NLEAPRKWRLLRERTGHGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRF 1170
+LE LR F + I P L T+K +V+ G +L+ P + +
Sbjct: 874 SLE-----ESLRRAHASPLFKAKYFYITPG-ICPSLSTMKAIVECAGGKVLSRQPSFRKL 927
Query: 1171 L 1171
+
Sbjct: 928 M 928
Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 110 LVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKL 169
+ CL+ +DR + ++ G L K THL+ + +GEKYE A + SIK+
Sbjct: 102 ITACLSQVSPEDRSALWAMLTFHGGGCQLNL-NRKCTHLVVPEPKGEKYECALRRASIKI 160
Query: 170 VNHRWLEDCL 179
V W+ DC+
Sbjct: 161 VTPDWVLDCI 170
Score = 39.7 bits (91), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 15 FVLF-GFDPINERQVRSKLIDGGGVDVGLYTQSCTHVIVDKIV----FDDSVCVAARTDG 69
FVLF GF+P+ +Q KL GG +V Q CTH+I K+ F ++ V
Sbjct: 783 FVLFTGFEPVQVQQYIKKLYILGG-EVAESAQKCTHLIASKVTRTVKFLTAISVV----- 836
Query: 70 KTLVTSLWVDHSLDIGMPVDAASIMYR 96
K +VT W++ VD + + R
Sbjct: 837 KHIVTPEWLEECFKCQKFVDEQNYLLR 863
>sp|Q91YE5|BAZ2A_MOUSE Bromodomain adjacent to zinc finger domain protein 2A OS=Mus musculus
GN=Baz2a PE=1 SV=2
Length = 1889
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 1257 DKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCTRSRI 1316
+K+TC C D E +L+C GC G HI C P +E+VPE DWFC C ++
Sbjct: 1661 NKVTCLVCRKGDNDEFLLLCD------GCDRGCHIYCHRPKMEAVPEGDWFCAVCLSQQV 1714
>sp|Q9UIF9|BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A OS=Homo sapiens
GN=BAZ2A PE=1 SV=4
Length = 1905
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 1257 DKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCTRSRI 1316
+K+TC C D E +L+C GC G HI C P +E+VPE DWFC C ++
Sbjct: 1675 NKVTCLVCRKGDNDEFLLLCD------GCDRGCHIYCHRPKMEAVPEGDWFCTVCLAQQV 1728
>sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens
GN=BAZ2B PE=1 SV=3
Length = 2168
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 1258 KITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1311
K+ CQ C D E++L+C GC G H C P + ++P+ DWFCP C
Sbjct: 1931 KVYCQICRKGDNEELLLLCD------GCDKGCHTYCHRPKITTIPDGDWFCPAC 1978
>sp|Q90WJ3|PAXI1_XENLA PAX-interacting protein 1 OS=Xenopus laevis GN=paxip1 PE=1 SV=1
Length = 1256
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Query: 35 GGGVDVGLYTQSCTHVIVDKIVFDDSVCVAARTDGKTLVTSLWVDHSLDIGMPVDAASIM 94
GG VD L ++ CTH++ + V S+ A + K +T+ W++ L V +
Sbjct: 826 GGTVDAALSSR-CTHLLCESQV--SSMYAQALKERKRCITAHWLNAVLKKKKMVPPYRAL 882
Query: 95 YRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLMGSQFSKPLVANKVTHLICYKFE 154
+ P+ G + ++ +TG+ DR+D+ + L G++++ L + T LIC +
Sbjct: 883 HFPVAFPPGGKPCSQHIISVTGFVDSDRDDLKLMGYLAGAKYTGYLCRSN-TVLICKEPS 941
Query: 155 GEKYELAKKIKSIKLVNHRWLEDCL 179
G KYE AK+ + I VN WL D L
Sbjct: 942 GLKYEKAKEWR-IPCVNALWLCDIL 965
Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 16 VLFGFDPINERQVRSKLIDGGGVDVGLYTQSCTHVIVDKIV----FDDSVCVAARTDGKT 71
+ GFDP+ +Q KL GG +V Q CTH++ +K+ F ++ VA K
Sbjct: 1057 IFTGFDPLQVQQYIKKLYILGG-EVADTAQKCTHLVANKVTRTVKFLTAISVA-----KH 1110
Query: 72 LVTSLWVDHSL 82
+VT W+D S
Sbjct: 1111 IVTPEWLDESF 1121
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 1053 THFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINL 1112
TH +A ++ RT KF A + + I+ ++L ++ KF E+ Y +L
Sbjct: 1088 THLVANKVTRTVKFLTAISVAKHIVTPEWLDESFKSQKFAEEQNYILRDAEAEVLFCFSL 1147
Query: 1113 EAPRKWRLLRERTGHGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRFL 1171
E L++ + F G + I P L T+K +V+ G IL P + + +
Sbjct: 1148 E-----ESLKKAHVNPLFKGKYFYITPG-ICPSLSTMKAIVECAGGKILTKQPSFRKIM 1200
Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 113 CLTGYQRQDREDIMTLVRLMGS--QFSKPLVANKVTHLICYKFEGEKYELAKKIKSIKLV 170
CL+ DR + L G Q S + K THLI + +G KYE A + SIK+V
Sbjct: 105 CLSQVSPDDRNSLWALTTFYGGDCQLS---LNKKCTHLIVPEPKGNKYEYAFQRGSIKIV 161
Query: 171 NHRWLED 177
W+ D
Sbjct: 162 TPDWVLD 168
>sp|Q9DE13|BAZ2B_CHICK Bromodomain adjacent to zinc finger domain protein 2B OS=Gallus
gallus GN=BAZ2B PE=2 SV=1
Length = 2130
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 1258 KITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1311
K+ CQ C D E++L+C GC G H C P + ++P+ DWFCP C
Sbjct: 1895 KVYCQICRKGDNEELLLLCD------GCDKGCHTYCHRPKITTIPDGDWFCPAC 1942
>sp|B7ZS37|BAZ2A_XENLA Bromodomain adjacent to zinc finger domain protein 2A OS=Xenopus
laevis GN=baz2a PE=2 SV=1
Length = 1698
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 1257 DKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1311
+K+TC C D E++L+C C G H C P + +PE DWFCPTC
Sbjct: 1475 NKVTCLYCRKGDNDELLLLCD------SCDRGCHTYCHRPRMNEIPEGDWFCPTC 1523
>sp|Q8UVR5|BAZ1A_XENLA Bromodomain adjacent to zinc finger domain protein 1A (Fragment)
OS=Xenopus laevis GN=baz1a PE=2 SV=1
Length = 627
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 1261 CQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1311
C+ C GE M++C GC G HI C P L+ VPE DWFCP C
Sbjct: 225 CKVCRKKGDGESMVLCD------GCDRGHHIYCVRPKLKYVPEGDWFCPEC 269
>sp|O70445|BARD1_MOUSE BRCA1-associated RING domain protein 1 OS=Mus musculus GN=Bard1 PE=2
SV=1
Length = 765
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 1012 KDEPIWFILSG-HRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAP--EIRRTEKFFA 1068
K+ P+ FI SG Q+K + LK + C ++ TH I P E + T K
Sbjct: 554 KNGPLVFIGSGLSSQQQKMLSKLETVLKAKKCM---EFDSTVTHVIVPDEEAQSTLKCML 610
Query: 1069 AAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHG 1128
SG WILK D++ AC + EE YE P++ RL RE+
Sbjct: 611 GILSGCWILKFDWVKACLDSKVREQEEKYEVPG------------GPQRSRLNREQLLPK 658
Query: 1129 AFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSP 1165
F G + G+ P D L +++ A G +L+ P
Sbjct: 659 LFDGCYFFLGGNFKHHPRDDLLKLIAAAGGKVLSRKP 695
>sp|Q61T02|KDM5_CAEBR Lysine-specific demethylase rbr-2 OS=Caenorhabditis briggsae GN=rbr-2
PE=3 SV=2
Length = 1482
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 1257 DKITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCTRS 1314
+++ C +C +++L+C E GC G H CCDP L+ VPE +W CP C S
Sbjct: 321 EQVYCVSCNEGKDEDLLLLCDIE----GCNSGRHTYCCDPVLDEVPEGEWRCPKCIES 374
>sp|Q99728|BARD1_HUMAN BRCA1-associated RING domain protein 1 OS=Homo sapiens GN=BARD1 PE=1
SV=2
Length = 777
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 1012 KDEPIWFILSGHRLQRK----EFQVVIRHLKGRLCRDSHQWSYQATHFIAP--EIRRTEK 1065
+D P+ I SG +++ E V+++ + ++ TH + P ++ T K
Sbjct: 566 RDGPLVLIGSGLSSEQQKMLSELAVILK------AKKYTEFDSTVTHVVVPGDAVQSTLK 619
Query: 1066 FFAAAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERT 1125
+G WILK +++ AC + EE YE E PR+ RL RE+
Sbjct: 620 CMLGILNGCWILKFEWVKACLRRKVCEQEEKYEIP------------EGPRRSRLNREQL 667
Query: 1126 GHGAFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSP 1165
F G ++G P D L ++V AG G IL+ P
Sbjct: 668 LPKLFDGCYFYLWGTFKHHPKDNLIKLVTAGGGQILSRKP 707
>sp|Q96T23|RSF1_HUMAN Remodeling and spacing factor 1 OS=Homo sapiens GN=RSF1 PE=1 SV=2
Length = 1441
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 1261 CQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1311
C+ CG + E++L+C C G H C PPL +P+ +WFCP C
Sbjct: 894 CKKCGLPNHPELILLCD------SCDSGYHTACLRPPLMIIPDGEWFCPPC 938
>sp|Q23541|KDM5_CAEEL Lysine-specific demethylase rbr-2 OS=Caenorhabditis elegans GN=rbr-2
PE=1 SV=2
Length = 1477
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 1258 KITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTCTRS 1314
++ C AC +++L+C + GC G H CCDP L+ VPE +W CP C S
Sbjct: 319 QVFCVACNEGKDEDLLLLCDID----GCNNGRHTYCCDPVLDEVPEGEWRCPKCIES 371
>sp|Q7TMI3|UHRF2_MOUSE E3 ubiquitin-protein ligase UHRF2 OS=Mus musculus GN=Uhrf2 PE=1 SV=1
Length = 803
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 13/63 (20%)
Query: 1255 DTDKITCQACGCSDRGE-----VMLICGDESGSVGCGVGMHIDCCDPPLESVPEED-WFC 1308
D DK TC C C GE + L+C + C + HI C PPL+ VPEE+ W+C
Sbjct: 338 DPDK-TCHMCSCHKCGEKRDPNMQLLCDE------CNMAYHIYCLSPPLDKVPEEEYWYC 390
Query: 1309 PTC 1311
P+C
Sbjct: 391 PSC 393
>sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens
GN=BAZ1A PE=1 SV=2
Length = 1556
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 1261 CQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1311
C+ C E M++C GC G H C P L++VPE DWFCP C
Sbjct: 1151 CKICRKKGDAENMVLCD------GCDRGHHTYCVRPKLKTVPEGDWFCPEC 1195
>sp|Q6J6I8|BRCA1_GORGO Breast cancer type 1 susceptibility protein homolog OS=Gorilla
gorilla gorilla GN=BRCA1 PE=3 SV=1
Length = 1863
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 27/206 (13%)
Query: 1018 FILSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPE-----IRRTEKFFAAAAS 1072
++SG L +EF +V + + ++ + + TH + RT K+F A
Sbjct: 1652 MVVSG--LTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAG 1709
Query: 1073 GRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHGAFHG 1132
G+W++ +++ + GK L E +E + + N + P++ R ++R F G
Sbjct: 1710 GKWVVSYFWVTQSIKEGKMLNEHDFEVRGDVV---NGRNHQGPKRARESQDRK---IFRG 1763
Query: 1133 MRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRFLNSGVD-FAVVSPGMPRVDLWV 1191
+ I YG P D L+ +V+ +++ +T L +GV VV P D W
Sbjct: 1764 LDICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFT--LGTGVHPIVVVQP-----DAWT 1816
Query: 1192 QEFLKH------EIPCVVADYLVEFV 1211
++ H E P V +++++ V
Sbjct: 1817 EDNGFHAIGQMCEAPVVTREWVLDSV 1842
>sp|Q96PU4|UHRF2_HUMAN E3 ubiquitin-protein ligase UHRF2 OS=Homo sapiens GN=UHRF2 PE=1 SV=1
Length = 802
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 7/53 (13%)
Query: 1260 TCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEED-WFCPTC 1311
+C+ CG + L+C DE C V HI C +PPL+ VPEE+ W+CP+C
Sbjct: 346 SCRVCGGKHEPNMQLLC-DE-----CNVAYHIYCLNPPLDKVPEEEYWYCPSC 392
>sp|Q92794|KAT6A_HUMAN Histone acetyltransferase KAT6A OS=Homo sapiens GN=KAT6A PE=1 SV=2
Length = 2004
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 10/57 (17%)
Query: 1259 ITCQACG-CSDRG---EVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1311
I C+ C C D+G + ML C C G H++CCDPPL +P+ W C C
Sbjct: 260 IECKTCSSCRDQGKNADNMLFCD------SCDRGFHMECCDPPLTRMPKGMWICQIC 310
>sp|Q96T88|UHRF1_HUMAN E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens GN=UHRF1 PE=1 SV=1
Length = 793
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 1260 TCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEED-WFCPTC 1311
C CG + L+C + C + HI C DPPL SVP ED W+CP C
Sbjct: 317 ACHLCGGRQDPDKQLMCDE------CDMAFHIYCLDPPLSSVPSEDEWYCPEC 363
>sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus
GN=Baz1a PE=1 SV=3
Length = 1555
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 1261 CQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1311
C+ C E M++C GC G H C P L++VP+ DWFCP C
Sbjct: 1152 CKICRKKGDAENMVLCD------GCDRGHHTYCVRPKLKAVPDGDWFCPEC 1196
>sp|Q8WYB5|KAT6B_HUMAN Histone acetyltransferase KAT6B OS=Homo sapiens GN=KAT6B PE=1 SV=3
Length = 2073
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Query: 1260 TCQACGCSDR-GEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1311
TC AC R + ML C C G H++CCDPPL +P+ W C C
Sbjct: 271 TCSACRVQGRNADNMLFCD------SCDRGFHMECCDPPLSRMPKGMWICQVC 317
>sp|Q8VDF2|UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus GN=Uhrf1 PE=1 SV=2
Length = 782
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 1258 KITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESV-PEEDWFCPTC 1311
K C CG + E L+C + C + H+ C PPL SV PE +W+CP+C
Sbjct: 320 KCACHVCGGREAPEKQLLCDE------CDMAFHLYCLKPPLTSVPPEPEWYCPSC 368
>sp|Q8BZ21|KAT6A_MOUSE Histone acetyltransferase KAT6A OS=Mus musculus GN=Kat6a PE=1 SV=2
Length = 2003
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 10/57 (17%)
Query: 1259 ITCQACG-CSDRG---EVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1311
I C+ C C D+G + ML C C G H++CCDPPL +P+ W C C
Sbjct: 260 IECKTCSSCRDQGKNADNMLFCD------SCDRGFHMECCDPPLTRMPKGMWICQIC 310
>sp|P38850|RT107_YEAST Regulator of Ty1 transposition protein 107 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RTT107 PE=1
SV=1
Length = 1070
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 73 VTSLWVDHSLDIGMPVDAASIMYRPLKDLNGIHGANSLVMCLTGYQRQDREDIMTLVRLM 132
V+ L+ +L PV ++++P + + L + T Y R I LV ++
Sbjct: 345 VSWLFYMFALQKFTPVSQCKLIHQPFHA--KLFTSKELTVAYTNYFGSQRFYIQRLVEIL 402
Query: 133 GSQFSKPLVANKVTHLICYKFEGEKYELAKKI-----KSIKLVNHRWLEDC 178
G S P + K THLI G+K+++AKK +I + NH WLE C
Sbjct: 403 GG-LSTPELTRKNTHLITKSTIGKKFKVAKKWSLDPQNAIIVTNHMWLEQC 452
>sp|Q6J6J0|BRCA1_PONPY Breast cancer type 1 susceptibility protein homolog OS=Pongo pygmaeus
GN=BRCA1 PE=3 SV=1
Length = 1863
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 1018 FILSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPE-----IRRTEKFFAAAAS 1072
++SG L +EF +V + + ++ + + TH + RT K+F A
Sbjct: 1652 MVVSG--LTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAG 1709
Query: 1073 GRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHGAFHG 1132
G+W++ +++ + K L E +E + + N + P++ R ++R F G
Sbjct: 1710 GKWVVSYFWVTQSIKERKMLNEHDFEVRGDVV---NGRNHQGPKRARESQDRK---IFRG 1763
Query: 1133 MRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRFLNSGVD-FAVVSPGMPRVDLWV 1191
+ I YG P D L+ +V+ +++ +T L +GV VV P D W
Sbjct: 1764 LEICCYGPFTNMPTDQLEWIVQLCGASVVKELSSFT--LGTGVHPIVVVQP-----DAWT 1816
Query: 1192 QEFLKH------EIPCVVADYLVEFV 1211
++ H E P V +++++ V
Sbjct: 1817 EDNGFHAIGQMCEAPVVTREWVLDSV 1842
>sp|Q5TKR9|KAT6A_RAT Histone acetyltransferase KAT6A OS=Rattus norvegicus GN=Kat6a PE=2
SV=2
Length = 1998
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 10/57 (17%)
Query: 1259 ITCQACG-CSDRG---EVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1311
I C+ C C D+G + ML C C G H++CCDPPL +P+ W C C
Sbjct: 260 IECKTCSSCRDQGKNADNMLFCD------SCDRGFHMECCDPPLTRMPKGMWICQIC 310
>sp|Q8WML3|KAT6B_MACFA Histone acetyltransferase KAT6B OS=Macaca fascicularis GN=KAT6B PE=2
SV=1
Length = 1784
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Query: 1260 TCQACGCSDR-GEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1311
TC AC R + ML C C G H++CCDPPL +P+ W C C
Sbjct: 271 TCSACRVQGRNADNMLFCD------SCDRGFHMECCDPPLSRMPKGMWICQVC 317
>sp|Q09819|YAC5_SCHPO Uncharacterized protein C16C9.05 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC16C9.05 PE=1 SV=1
Length = 404
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
Query: 1261 CQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPL--ESVPEEDWFCPTCTRSRINP 1318
C ACG G + IC + GC H+ C +PPL E++PE WFC TC+ +P
Sbjct: 120 CSACG----GRGLFICCE-----GCPCSFHLSCLEPPLTPENIPEGSWFCVTCSIKSHHP 170
Query: 1319 SKRTSS 1324
K S
Sbjct: 171 PKHPLS 176
>sp|Q9GKK8|BRCA1_PANTR Breast cancer type 1 susceptibility protein homolog OS=Pan
troglodytes GN=BRCA1 PE=2 SV=2
Length = 1863
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 1018 FILSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPE-----IRRTEKFFAAAAS 1072
++SG L +EF +V + + ++ + + TH + RT K+F A
Sbjct: 1652 MVVSG--LTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAG 1709
Query: 1073 GRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHGAFHG 1132
G+W++ +++ + K L E +E + + N + P++ R ++R F G
Sbjct: 1710 GKWVVSYFWVTQSIKERKMLNEHDFEVRGDVV---NGRNHQGPKRARESQDRK---IFRG 1763
Query: 1133 MRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRFLNSGVD-FAVVSPGMPRVDLWV 1191
+ I YG P D L+ +V+ +++ +T L +GV VV P D W
Sbjct: 1764 LEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFT--LGTGVHPIVVVQP-----DAWT 1816
Query: 1192 QEFLKH------EIPCVVADYLVEFV 1211
++ H E P V +++++ V
Sbjct: 1817 EDNGFHAIGQMCEAPVVTREWVLDSV 1842
>sp|P38398|BRCA1_HUMAN Breast cancer type 1 susceptibility protein OS=Homo sapiens GN=BRCA1
PE=1 SV=2
Length = 1863
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 1018 FILSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIAPE-----IRRTEKFFAAAAS 1072
++SG L +EF +V + + ++ + + TH + RT K+F A
Sbjct: 1652 MVVSG--LTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAG 1709
Query: 1073 GRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHGAFHG 1132
G+W++ +++ + K L E +E + + N + P++ R ++R F G
Sbjct: 1710 GKWVVSYFWVTQSIKERKMLNEHDFEVRGDVV---NGRNHQGPKRARESQDRK---IFRG 1763
Query: 1133 MRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRFLNSGVD-FAVVSPGMPRVDLWV 1191
+ I YG P D L+ +V+ +++ +T L +GV VV P D W
Sbjct: 1764 LEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFT--LGTGVHPIVVVQP-----DAWT 1816
Query: 1192 QEFLKH------EIPCVVADYLVEFV 1211
++ H E P V +++++ V
Sbjct: 1817 EDNGFHAIGQMCEAPVVTREWVLDSV 1842
>sp|Q864U1|BRCA1_BOVIN Breast cancer type 1 susceptibility protein homolog OS=Bos taurus
GN=BRCA1 PE=1 SV=1
Length = 1849
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 27/208 (12%)
Query: 1016 IWFILSGHRLQRKEFQVVIRHLKGRLCRDSHQWSYQATHFIA---PEI--RRTEKFFAAA 1070
+ + SG L KE +V + + ++ + + TH I PE RT K+F
Sbjct: 1643 LSMVASG--LTPKELMLVQKFARKHHVTLTNLITEETTHVIMKTDPEFVCERTLKYFLGI 1700
Query: 1071 ASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHGAF 1130
A G+W++ +++ + GK L E +E + + N + P++ R R++ F
Sbjct: 1701 AGGKWVVSYFWVTQSIKEGKMLDEHDFEVRGDVV---NGRNHQGPKRARESRDK---KIF 1754
Query: 1131 HGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSPPYTRFLNSGVD-FAVVSPGMPRVDL 1189
G+ I YG P D L+ +V+ +++ +T + G VV P D
Sbjct: 1755 KGLEICCYGPFTNMPTDQLEWMVQLCGASVVKEPSSFTP--DQGTHPVVVVQP-----DA 1807
Query: 1190 WVQEFLKH------EIPCVVADYLVEFV 1211
W ++ H E P V +++++ V
Sbjct: 1808 WTEDAGFHVIGQMCEAPVVTREWVLDSV 1835
>sp|Q9VMJ7|KDM5_DROME Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid
PE=1 SV=1
Length = 1838
Score = 47.4 bits (111), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 1258 KITCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPEEDWFCPTC 1311
K C C D E ML+C GC H C PPL S+P+ +W CP C
Sbjct: 448 KYICHICNRGDVEESMLLCD------GCDDSYHTFCLLPPLTSIPKGEWLCPRC 495
>sp|F6UA42|UHRF1_XENTR E3 ubiquitin-protein ligase UHRF1 OS=Xenopus tropicalis GN=uhrf1 PE=3
SV=2
Length = 775
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 1260 TCQACGCSDRGEVMLICGDESGSVGCGVGMHIDCCDPPLESVPE-EDWFCPTC 1311
C CG E L+C + C + HI C PPL ++P+ EDW+CP C
Sbjct: 317 ACYVCGGKQDPEKQLLCDE------CDMAFHIYCLKPPLSAIPQDEDWYCPDC 363
>sp|Q9QZH2|BARD1_RAT BRCA1-associated RING domain protein 1 OS=Rattus norvegicus GN=Bard1
PE=2 SV=1
Length = 768
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 1012 KDEPIWFILSGHRLQRKEFQVVIRH-LKGRLCRDSHQWSYQATHFIAP--EIRRTEKFFA 1068
K P+ I SG Q+++ + LK + C ++ TH I P E + T K
Sbjct: 557 KSGPLVLIGSGLSSQQQKLLSKLETVLKAKKCA---EFDNTVTHVIVPDEEAQSTLKCML 613
Query: 1069 AAASGRWILKTDYLSACSQAGKFLLEEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHG 1128
+G W+LK D++ AC + + EE YE P++ RL RE+
Sbjct: 614 GILNGCWVLKFDWVKACLDSQEREQEEKYEVPG------------GPQRSRLNREQLLPK 661
Query: 1129 AFHGMRIIVYGDCIAPPLDTLKRVVKAGDGNILATSP 1165
F G + G+ P + L +++ A G IL+ P
Sbjct: 662 LFDGCYFFLGGNFKHHPKEDLLKLIAAAGGRILSRKP 698
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 512,119,326
Number of Sequences: 539616
Number of extensions: 22834810
Number of successful extensions: 56866
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 410
Number of HSP's that attempted gapping in prelim test: 55853
Number of HSP's gapped (non-prelim): 1321
length of query: 1324
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1194
effective length of database: 121,419,379
effective search space: 144974738526
effective search space used: 144974738526
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 68 (30.8 bits)