BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000736
(1323 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1 OS=Arabidopsis thaliana GN=ELP1 PE=1 SV=1
Length = 1319
Score = 1663 bits (4306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 833/1327 (62%), Positives = 1015/1327 (76%), Gaps = 12/1327 (0%)
Query: 1 MNNLKLCAEVPLNLELQSKDEILQFSALDIEQNRLFFASSANNIYSAQLSSFQNERASIK 60
M NLKL +EVP N++L S +E++QF+A DI+Q+RLFFASSAN +Y+ QLSSFQNE A K
Sbjct: 1 MKNLKLFSEVPQNIQLHSTEEVVQFAAYDIDQSRLFFASSANFVYALQLSSFQNESAGAK 60
Query: 61 TAISAEIEHIDLEPGDSITAFDYLMEKEALIVGTSSGLLLLHSVDGNATEVVGRVEGGVR 120
+A+ E+ ID+EPGD ITAFDYL EKE+L++GTS GLLL+H+V+ + TE+VG +EGGV+
Sbjct: 61 SAMPVEVCSIDIEPGDFITAFDYLAEKESLLIGTSHGLLLVHNVESDVTELVGNIEGGVK 120
Query: 121 FISPSPDGDLLGVTTGFGQILVMTHDWDLLYENPLEELAEGFDVHEPELSSSFSFKSPIS 180
ISP+P GDLLG+ TG GQ+LVMT+DW L+YE L E+ EG V E S IS
Sbjct: 121 CISPNPTGDLLGLITGLGQLLVMTYDWALMYEKALGEVPEGGYVRETNDLSVNCGGISIS 180
Query: 181 WRGDGKYFATLSEFCNSSKLHKRLKVWERDSGTLQASSELKAFMGAVLEWMPSGANIAAV 240
WRGDGKYFAT+ E S + K++K+WE DSG LQ+SSE K F +LEWMPSGA IAAV
Sbjct: 181 WRGDGKYFATMGEVYESGCMSKKIKIWESDSGALQSSSETKEFTQGILEWMPSGAKIAAV 240
Query: 241 YDRKSENKCPSIVFYERNGLERSSFDINEQIDST--VELLKWNCMSDLLAAVVRFEEYDS 298
Y RKS++ PSI F+ERNGLERSSF I E D+T E LKWN SDLLA VV + YD+
Sbjct: 241 YKRKSDDSSPSIAFFERNGLERSSFRIGEPEDATESCENLKWNSASDLLAGVVSCKTYDA 300
Query: 299 VKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQITTYNFIWTTAVMEN 358
+++ FFSNNHWYLK EIRY R G+ MW PTKPLQLICWTL GQ++ +F+W TAVME+
Sbjct: 301 IRVWFFSNNHWYLKQEIRYPREAGVTVMWDPTKPLQLICWTLSGQVSVRHFMWVTAVMED 360
Query: 359 STALVIDGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLC 418
STA VID SKILVTPLSLSLMPPPMYLFSL F +AV ++A+YS++SKNCLA LSDG L
Sbjct: 361 STAFVIDNSKILVTPLSLSLMPPPMYLFSLSFSSAVRDIAYYSRNSKNCLAVFLSDGNLS 420
Query: 419 VVDLPAPDMLEDLEGTEFVVEACISETAFGSVIHLIWLGSHLLLSVSHHGPRHSNYFRGA 478
V+ PAP+ EDLEG +F VE +TA GS +HL+WL H LL VS +G H+
Sbjct: 421 FVEFPAPNTWEDLEGKDFSVEISDCKTALGSFVHLLWLDVHSLLCVSAYGSSHNKCLSSG 480
Query: 479 TLNEDGLLGFYAQEIELACSEDHVQGLLTCAGWHAKVSTQIPLEGLVIAIAPNNAKKYSA 538
+ + L G Y QE+E+ C EDHV +TC+G+ A ++ Q LE V+A+A N +K+ SA
Sbjct: 481 GYDTE-LHGSYLQEVEVVCHEDHVPDQVTCSGFKASITFQTLLESPVLALAWNPSKRDSA 539
Query: 539 FLQFHGGKISEYMSRVGLTGGALTHDDASFPSSCPWMNVVSVGTNGPLKPLLFGLDDGGR 598
F++F GGK+ Y SR + + D FPS+CPW+ V V +G KPL+ GLDD GR
Sbjct: 540 FVEFEGGKVLGYASRSEIMETRSSDDSVCFPSTCPWVRVAQVDASGVHKPLICGLDDMGR 599
Query: 599 LHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLFIVDISDILHGELALKYENFTH 658
L ++GK +CNNCSSFSFYS+ A + ++HLI+ TKQ+ LFIVD D+L+G++AL F
Sbjct: 600 LSINGKNLCNNCSSFSFYSELANEVVTHLIILTKQDFLFIVDTKDVLNGDVALGNVFFVI 659
Query: 659 VGNRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVLTSIVNALI 718
G RR EEN+SY+NIWERGAKVIGVL+GDEAAVILQT RGNLEC+YPRKLVL+SI NAL
Sbjct: 660 DGRRRDEENMSYVNIWERGAKVIGVLNGDEAAVILQTMRGNLECIYPRKLVLSSITNALA 719
Query: 719 QGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEFVCAINNENIT 778
Q RF+DA +VRRHRI+FNVIVD GWQAFLQSA FV QVNNL+++TEFVCA+ NE++T
Sbjct: 720 QQRFKDAFNLVRRHRIDFNVIVDLYGWQAFLQSAVAFVEQVNNLNHVTEFVCAMKNEDVT 779
Query: 779 ETLYKKFQFLSLPCREEFKDLPAKDFKASECNKVSSVLLAIRKALEEKVPESPSRELCIL 838
ETLYKKF F S E F+ K S NKVSSVL AIRKALEE +PESPSRELCIL
Sbjct: 780 ETLYKKFSF-SKKGDEVFR------VKDSCSNKVSSVLQAIRKALEEHIPESPSRELCIL 832
Query: 839 TTLARSDPPALEEALERIKIIRETELLGS-DEPRRMSYPSAEEALKHLLWLADSEAVYEA 897
TTLARSDPPA+EE+L RIK +RE ELL S D+ R+ S PSAEEALKHLLWL DSEAV+EA
Sbjct: 833 TTLARSDPPAIEESLLRIKSVREMELLNSSDDIRKKSCPSAEEALKHLLWLLDSEAVFEA 892
Query: 898 ALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENALKHIVSM 957
ALGLYDLNLAAIVALNSQRDPKEFLPYLQELE MP LM + ID++LQRF++AL++IVS
Sbjct: 893 ALGLYDLNLAAIVALNSQRDPKEFLPYLQELEKMPESLMHFKIDIKLQRFDSALRNIVSA 952
Query: 958 GDSYHADCLNLMKKYAQLFPLGLKLITDPAKMEQVLEAWADHLSDVKCFEDAATTYFCCS 1017
G Y DC+NL+KK QLFPLGL LITDP K VLEAWADHL D K FEDAATTY CC
Sbjct: 953 GVGYFPDCMNLIKKNPQLFPLGLLLITDPEKKLVVLEAWADHLIDEKRFEDAATTYLCCC 1012
Query: 1018 SLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYC 1077
LEKA KAYR G+WSGVL V L+KLGKDE+ KLA ELCEE+ ALGKP EAAKIAL+YC
Sbjct: 1013 KLEKASKAYRECGDWSGVLRVGALMKLGKDEILKLAYELCEEVNALGKPAEAAKIALEYC 1072
Query: 1078 GDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGEYKEGLEKVGKY 1137
D++ GISLLI+AR+WEEALRVAF+H +D I+ VK ++LECAS L+ E+KE +EKVGKY
Sbjct: 1073 SDISGGISLLINAREWEEALRVAFLHTADDRISVVKSSALECASGLVSEFKESIEKVGKY 1132
Query: 1138 LTRYLAVRQRRLLLVAKLQSEDRSMNDLDDDTVSETSSTFSGMSVYTTGTRKS-SAASIK 1196
LTRYLAVRQRRLLL AKL+SE+RS+ DLDDDT SE SS SGMS YT GTR+ +A+
Sbjct: 1133 LTRYLAVRQRRLLLAAKLKSEERSVVDLDDDTASEASSNLSGMSAYTLGTRRGSAASVSS 1192
Query: 1197 STAASKARESKRQRNRGKIRPGSPGEEMALVDHLKGMSLTVGAKQELKSLVVFLVMLGEV 1256
S A S+AR+ +RQR GKIR GS GEEMALVDHLKGM +T G K+ELKSL++ LV LGE+
Sbjct: 1193 SNATSRARDLRRQRKSGKIRAGSAGEEMALVDHLKGMRMTDGGKRELKSLLICLVTLGEM 1252
Query: 1257 DTARKLQDTGETFQLSQMAAIKLAEDTMSIDIINEHAHNMERYVQIVKLESQNSEAFSWR 1316
++A+KLQ T E FQ+SQ+AA++LA DT+S + ++E + ERY Q + +++S+AFSW
Sbjct: 1253 ESAQKLQQTAENFQVSQVAAVELAHDTVSSESVDEEVYCFERYAQKTRSTARDSDAFSWM 1312
Query: 1317 SKVFLSP 1323
KVF+SP
Sbjct: 1313 LKVFISP 1319
>sp|O95163|ELP1_HUMAN Elongator complex protein 1 OS=Homo sapiens GN=IKBKAP PE=1 SV=3
Length = 1332
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 357/1242 (28%), Positives = 573/1242 (46%), Gaps = 160/1242 (12%)
Query: 59 IKTAISAEIEHIDLEPGDS-ITAFDYLMEKEALIVGTSSGLLLLHSVDGNATEVVGRVEG 117
+K +S E E G I L+++E++ V T+SG ++L S+ E VG V
Sbjct: 51 VKNEVSLVAEGFLPEDGSGRIVGVQDLLDQESVCVATASGDVILCSLSTQQLECVGSVAS 110
Query: 118 GVRFISPSPDGDLLGVTTGFGQILVMTHDWDLLYENPLEE--------LAEGFDVHEPEL 169
G+ +S SPD +L+ + TG +++MT D++ + E + + + G+ E +
Sbjct: 111 GISVMSWSPDQELVLLATGQQTLIMMTKDFEPILEQQIHQDDFGESKFITVGWGRKETQF 170
Query: 170 SSS------FSF------------KSPISWRGDGKYFATLSEFCNSSKLHKRLKVWERDS 211
S F + ++WRGDG++FA +S C + ++++VW R+
Sbjct: 171 HGSEGRQAAFQMQMHESALPWDDHRPQVTWRGDGQFFA-VSVVCPETGA-RKVRVWNREF 228
Query: 212 GTLQASSELKAFMGAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQI 271
LQ++SE A +G L W PSG+ IA+ D+ ++ IVF+E+NGL F +
Sbjct: 229 A-LQSTSEPVAGLGPALAWKPSGSLIASTQDKPNQQ---DIVFFEKNGLLHGHFTLPFLK 284
Query: 272 DST-VELLKWNCMSDLLAAVV---RFEEYDSVKICF----FSNNHWYLKYEIRYL---RR 320
D V L WN S +LA + + EE K C N HWYLK + + +
Sbjct: 285 DEVKVNDLLWNADSSVLAVWLEDLQREESSIPKTCVQLWTVGNYHWYLKQSLSFSTCGKS 344
Query: 321 DGIRFMWHPTKPLQLICWTLDGQITTYNFIWTT--AVMENSTAL----VIDGSKILVTPL 374
+ MW P P +L Y++ WTT +V +NS+ L VIDG+++LVT
Sbjct: 345 KIVSLMWDPVTPYRLHVLCQGWHYLAYDWHWTTDRSVGDNSSDLSNVAVIDGNRVLVTVF 404
Query: 375 SLSLMPPPMYLFSLKFPTAVTEMAFYSKSSK-NCLAAILSDGCLCVV---DLPAPDMLED 430
+++PPPM + L FP V ++ F + K N LA + + + V D P+ D
Sbjct: 405 RQTVVPPPMCTYQLLFPHPVNQVTFLAHPQKSNDLAVLDASNQISVYKCGDCPSAD---- 460
Query: 431 LEGTEFVVEACISETAFGSVIHLIWLGSHLLLSVSHHGPRHSNYFRGATLNED------- 483
+ A G G + L H R+ F NED
Sbjct: 461 ---------PTVKLGAVGGS------GFKVCLRTPHLEKRYKIQFEN---NEDQDVNPLK 502
Query: 484 -GLLGFYAQEIELACSEDH-----VQGLLTCAG-------WHAKVSTQIPLEGLVIAIAP 530
GLL + +++ LA S V LT A VS+ ++G++I++
Sbjct: 503 LGLLTWIEEDVFLAVSHSEFSPRSVIHHLTAASSEMDEEHGQLNVSSSAAVDGVIISLC- 561
Query: 531 NNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHDDASFPSSCPWMNVVSVGTNGPLKPLL 590
N+K S LQ G+I +Y+ + FP P+ + + +
Sbjct: 562 CNSKTKSVVLQLADGQIFKYLWESPSLAIKPWKNSGGFPVRFPYPCTQTELAMIGEEECV 621
Query: 591 FGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLFIVDISDILHGEL- 649
GL D R ++ V +N +SF+ Y + L+L T + + D L
Sbjct: 622 LGLTDRCRFFINDIEVASNITSFAVYDE-------FLLLTTHSHTCQCFCLRDASFKTLQ 674
Query: 650 -ALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKL 708
L + +H RK E RG++++ V+ D ++LQ RGNLE ++ R L
Sbjct: 675 AGLSSNHVSHGEVLRKVE---------RGSRIVTVVPQD-TKLVLQMPRGNLEVVHHRAL 724
Query: 709 VLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEF 768
VL I L + F++A +R+ RIN N+I DH + FL + F++Q++++++I F
Sbjct: 725 VLAQIRKWLDKLMFKEAFECMRKLRINLNLIYDH-NPKVFLGNVETFIKQIDSVNHINLF 783
Query: 769 VCAINNENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNKVSSVLLAIRKALEEKVP 828
+ E++T+T+Y P ++D + NK+ V A+R +E P
Sbjct: 784 FTELKEEDVTKTMY--------PAPVTSSVYLSRD---PDGNKIDLVCDAMRAVMESINP 832
Query: 829 ESPSRELCILTTLARSDPPALEEALERIKIIRETELLGSDEPRRMSYPSAEEALKHLLWL 888
L ILT+ + P LE L+++ EL G + P SAEEALK+LL L
Sbjct: 833 HKYC--LSILTSHVKKTTPELEIVLQKVH-----ELQG-NAPSDPDAVSAEEALKYLLHL 884
Query: 889 ADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMRYTIDLRLQRFE 948
D +Y+ +LG YD +L +VA SQ+DPKE+LP+L L+ M R+TID L+R+E
Sbjct: 885 VDVNELYDHSLGTYDFDLVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYE 944
Query: 949 NALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLITDPAKMEQVLE-AWADHLSDVKCFE 1007
A+ H+ G Y +CLNL+K L+ LKL + ++ Q + A+ +HL +E
Sbjct: 945 KAIGHLSKCGPEYFPECLNLIKD-KNLYNEALKLYSPSSQQYQDISIAYGEHLMQEHMYE 1003
Query: 1008 DAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPG 1067
A + C + EKA+ A+ GNW L VA L KD++ L + L +L K
Sbjct: 1004 PAGLMFARCGAHEKALSAFLTCGNWKQALCVAAQLNFTKDQLVGLGRTLAGKLVEQRKHI 1063
Query: 1068 EAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLI-TKVKHASLECASSLIGE 1126
+AA + + D + LL++ WEEALR+ + + R D+I T VK + LE +
Sbjct: 1064 DAAMVLEECAQDYEEAVLLLLEGAAWEEALRLVYKYNRLDIIETNVKPSILEAQKN---- 1119
Query: 1127 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDLDD--------DTVSETSSTFS 1178
Y L+ +R+ ++RLL+V +L+ E LDD D SETSS S
Sbjct: 1120 YMAFLDSQTATFSRH----KKRLLVVRELK-EQAQQAGLDDEVPHGQESDLFSETSSVVS 1174
Query: 1179 GMSVYTTGTRKSSAASIKSTAASKARESKRQRNRGKIRPGSP 1220
G + + K S ++ + +A S K +R + ++ GSP
Sbjct: 1175 GSEM----SGKYSHSNSRISARSSKNRRKAERKKHSLKEGSP 1212
>sp|Q7TT37|ELP1_MOUSE Elongator complex protein 1 OS=Mus musculus GN=Ikbkap PE=2 SV=2
Length = 1333
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 365/1304 (27%), Positives = 599/1304 (45%), Gaps = 165/1304 (12%)
Query: 56 RASIKTAISAEIEHIDLEPGDS-ITAFDYLMEKEALIVGTSSGLLLLHSVDGNATEVVGR 114
R +KT IS E E G I L+++E++ V T+SG +++ ++ E VG
Sbjct: 48 RREVKTEISLVAEGFLPEDGSGCIVGIQDLLDQESVCVATASGDVIVCNLSTQQLECVGS 107
Query: 115 VEGGVRFISPSPDGDLLGVTTGFGQILVMTHDWDLLYENPL--EELAEG----------- 161
V G+ +S SPD +LL + T +++MT D++++ E + ++ EG
Sbjct: 108 VASGISVMSWSPDQELLLLATAQQTLIMMTKDFEVIAEEQIHQDDFGEGKFVTVGWGSKQ 167
Query: 162 ------------FDVHEPELSSSFSFKSP-ISWRGDGKYFATLSEFCNSSKLHKRLKVWE 208
F V PE + + + P I+WRGDG+YFA +S C ++ K ++VW
Sbjct: 168 TQFHGSEGRPTAFPVQLPENALPWDDRRPHITWRGDGQYFA-VSVVCRQTEARK-IRVWN 225
Query: 209 RDSGTLQASSELKAFMGAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDIN 268
R+ LQ++SE +G L W PSG+ IA+ D+ ++ +VF+E+NGL F +
Sbjct: 226 REFA-LQSTSESVPGLGPALAWKPSGSLIASTQDKPNQQ---DVVFFEKNGLLHGHFTLP 281
Query: 269 EQIDST-VELLKWNCMSDLLAAVVR-FEEYDS------VKICFFSNNHWYLKYEIRYL-- 318
D V L WN S +LA + + DS V++ N HWYLK + +
Sbjct: 282 FLKDEVKVNDLLWNADSSVLAIWLEDLPKEDSSTLKSYVQLWTVGNYHWYLKQSLPFSTT 341
Query: 319 -RRDGIRFMWHPTKPLQLICWTLDGQITTYNFIWTTAVMENSTA------LVIDGSKILV 371
+ + +W P P +L + ++ WTT ++A VIDG+++LV
Sbjct: 342 GKNQIVSLLWDPVTPCRLHVLCTGWRYLCCDWHWTTDRSSGNSANDLANVAVIDGNRVLV 401
Query: 372 TPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDL 431
T +++PPPM + L P V ++ F + + L V+D
Sbjct: 402 TVFRQTVVPPPMCTYRLLIPHPVNQVIFSAHLGND----------LAVLD---------- 441
Query: 432 EGTEFVVEACISETAFGSVIHLIWLGSH---LLLSVSHHGPRHSNYFRGAT--------- 479
+ V C + S + L +G + + L+ H R+S F
Sbjct: 442 ASNQISVYKCGDKPNMDSTVKLGAVGGNGFKVPLTTPHLEKRYSIQFGNNEEEEEEEVNA 501
Query: 480 --------LNEDGLLGFYAQE---------IELACSE-DHVQGLLTCAGWHAKVSTQIPL 521
+ +D L + + SE D QG L VS+ + +
Sbjct: 502 LQLSFLTWVEDDTFLAISYSHSSSQSIIHHLTVTHSEVDEEQGQL-------DVSSSVTV 554
Query: 522 EGLVIAIAPNNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHDDASFP----SSCPWMNV 577
+G+VI + +K S +Q G++ +Y+ + P C M V
Sbjct: 555 DGVVIGLC-CCSKTKSLAVQLADGQVLKYLWESPSLAVEPWKNSEGIPVRFVHPCTQMEV 613
Query: 578 VSVGTNGPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLF 637
++G + + GL D R ++ V +N +SF+ L++ T +
Sbjct: 614 ATIGG----EECVLGLTDRCRFFINDTEVASNITSFAVCD-------DFLLVTTHSHTCQ 662
Query: 638 IVDISDILHGELALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNR 697
+ +S +LK G+ I + ERG++++ V+ D +ILQ R
Sbjct: 663 VFSLSGA-----SLKMLQAALSGSHEASGEI--LRKVERGSRIVTVVPQD-TKLILQMPR 714
Query: 698 GNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVR 757
GNLE ++ R LVL I L + F++A +R+ RIN N+I DH + FL++ FV+
Sbjct: 715 GNLEVVHHRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIHDH-NPKVFLENVETFVK 773
Query: 758 QVNNLSYITEFVCAINNENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNKVSSVLL 817
Q++++++I F + E++T+T+Y P + + D K K+ +
Sbjct: 774 QIDSVNHINLFFTELREEDVTKTMYPP------PITKSVQVSTHPDGK-----KLDLICD 822
Query: 818 AIRKALEEKVPESPSRELC--ILTTLARSDPPALEEALERIKIIRETELLGSDEPRRMSY 875
A+R A+E P R+ C ILT+ + P LE L++++ EL G + P
Sbjct: 823 AMRAAMEAINP----RKFCLSILTSHVKKTTPELEIVLQKVQ-----ELQG-NLPFDPES 872
Query: 876 PSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLL 935
S EEALK+LL L D ++ +LG YD NL +VA SQ+DPKE+LP+L L+ M
Sbjct: 873 VSVEEALKYLLLLVDVNELFNHSLGTYDFNLVLMVAEKSQKDPKEYLPFLNTLKKMETNY 932
Query: 936 MRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLI-TDPAKMEQVLE 994
R+TID L+R+E AL H+ G Y +CLNL+K L+ LKL D + + V
Sbjct: 933 QRFTIDKYLKRYEKALGHLSKCGPEYFTECLNLIKD-KNLYKEALKLYRPDSPQYQAVSM 991
Query: 995 AWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQ 1054
A+ +HL +E A + C + EKA++A+ A G+W L VA L++ KD+VA LA+
Sbjct: 992 AYGEHLMQEHLYEPAGLVFARCGAQEKALEAFLACGSWQQALCVAAQLQMSKDKVAGLAR 1051
Query: 1055 ELCEELQALGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLI-TKVK 1113
L +L K EAA + Y D + LL++ WEEALR+ + + R D+I T VK
Sbjct: 1052 TLAGKLVEQRKHSEAATVLEQYAQDYEEAVLLLLEGSAWEEALRLVYKYDRVDIIETSVK 1111
Query: 1114 HASLECASSLIGEYKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDLDDDTVSET 1173
+ LE + + ++ R VR R ++ + + + D SET
Sbjct: 1112 PSILEAQKNYMDFLDSETATFIRHKNRLQVVRALR-RQAPQVHVDHEVAHGPESDLFSET 1170
Query: 1174 SSTFSGMSVYTTGTRKSSAASIKSTAASKARESKRQRNRGKIRPGSPGEEMALVDHLKGM 1233
SS SG + R S + S S +SK R K +R + ++ GSP E +AL++ L +
Sbjct: 1171 SSIMSGSEM---SGRYSHSNSRISARSSKNRR-KAERKKHSLKEGSPLEGLALLEALSEV 1226
Query: 1234 SLTVGA-KQELKSLVVFLVMLGEVDTARKLQDTGE-TFQLSQMA 1275
+V K E+++++ L + + A++LQ E T QL + A
Sbjct: 1227 VQSVEKLKDEVRAILKVLFLFEFEEQAKELQRAFESTLQLMERA 1270
>sp|Q8WND5|ELP1_RABIT Elongator complex protein 1 OS=Oryctolagus cuniculus GN=IKBKAP PE=2
SV=1
Length = 1333
Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust.
Identities = 357/1274 (28%), Positives = 596/1274 (46%), Gaps = 158/1274 (12%)
Query: 78 ITAFDYLMEKEALIVGTSSGLLLLHSVDGNATEVVGRVEGGVRFISPSPDGDLLGVTTGF 137
I L+++E++ + T+SG ++L ++ + E VG V G+ +S SPD +L+ + TG
Sbjct: 71 IVGIQDLLDQESVCIATASGDVILCNLSTHQLECVGSVASGISVMSWSPDQELVLLATGQ 130
Query: 138 GQILVMTHDWDLLYENPLEEL---------------------AEG----FDVHEPELSSS 172
+++MT D++ + E + + +EG F + E +
Sbjct: 131 QTLIMMTKDFEPIMEQQIHQDDFGESKFITVGWGKKETQFHGSEGRQAAFQIQTHESALP 190
Query: 173 FSFKSP-ISWRGDGKYFATLSEFCNSSKLHKRLKVWERDSGTLQASSELKAFMGAVLEWM 231
+ P ++WRGDG++FA +S C + ++++VW R+ LQ++SE +G L W
Sbjct: 191 WDDHRPRVTWRGDGQFFA-VSVVCPETGA-RKVRVWNREFA-LQSTSEPVPGLGPALAWK 247
Query: 232 PSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDST-VELLKWNCMSDLLAAV 290
PSG+ IA+ ++ ++ +VF+E+NGL F + D V L WN S +LA
Sbjct: 248 PSGSLIASTQNKPNQQ---DVVFFEKNGLLHGQFTLPFLKDEVKVNDLLWNADSSVLAVW 304
Query: 291 VR--FEEYDSV-----KICFFSNNHWYLKYEI---RYLRRDGIRFMWHPTKPLQLICWTL 340
+ E DSV ++ N HWYL + Y + + MW P P +L
Sbjct: 305 LEDLQREEDSVLKTYVQLWTVGNYHWYLNECLPFSTYGKSKIVSLMWDPVIPYRLHVLCQ 364
Query: 341 DGQITTYNFIWTT--AVMENSTAL----VIDGSKILVTPLSLSLMPPPMYLFSLKFPTAV 394
Y++ WTT + +N + L VIDG++ILVT +++PPPM + L P V
Sbjct: 365 GWHYLCYDWRWTTDRSSGDNESDLANVAVIDGNRILVTVFQQTVVPPPMCTYRLLLPHPV 424
Query: 395 TEMAFYSKSSK-NCLAAILSDGCLCVV---DLPAPD---MLEDLEGTEFVVEACI----- 442
++ F + K N LA + + + V D P+ D L + G F V
Sbjct: 425 NQVTFCALPKKSNDLAVLDASNQISVYKCGDSPSMDPTVKLGAVGGNGFKVSLRTPHLEK 484
Query: 443 -----------SETAFGSVIHLIWLGSHLLLSVSHH--GPRHSNYFRGATLNEDGLLGFY 489
ET + L W+ + L++ H P+ S R +
Sbjct: 485 RYKIQFESNEDQETNPLKLSLLSWIEEDIFLAICHSQCSPQQSVIHRLTVV--------- 535
Query: 490 AQEIELACSEDHVQGLLTCAGWHAKVSTQIPLEGLVIAIAPNNAKKYSAFLQFHGGKISE 549
C D QG L+ VS+ I ++G++I++ N+K S LQ G+I +
Sbjct: 536 ------PCEVDEEQGQLS-------VSSSISVDGIIISMC-CNSKTKSVALQLADGQILK 581
Query: 550 YMSRVGLTGGALTHDDASFPSSCPWMNVVSVGTNGPLKPLLFGLDDGGRLHVSGKIVCNN 609
Y+ + FP P+ + + + + GL D R ++ V +N
Sbjct: 582 YIWESPSLAVEPWKNPGGFPIQFPYPCIQTELAMIGGEECVLGLTDRCRFFINDTEVASN 641
Query: 610 CSSFSFYSKSAGQAMSHLILATKQNLLFIVDISDILHGELALKYENFTHVGNRRKEENIS 669
+SF+ Y + L+L T + + D L + +HV N +
Sbjct: 642 ITSFAVYDE-------FLLLTTHSHTCQCYCLKDASIKTLQAGLSS-SHVSNGEILRKV- 692
Query: 670 YINIWERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMV 729
ERG++++ V+ D +ILQ RGNLE ++ R LVL I L + F++A +
Sbjct: 693 -----ERGSRIVTVVPQD-TKLILQMPRGNLEVVHHRALVLAQIRKWLDKIMFKEAFECM 746
Query: 730 RRHRINFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEFVCAINNENITETLYKKFQFLS 789
R+ RIN N+I DH + FLQ+ F+RQ++ +++I F + E++T+T+Y
Sbjct: 747 RKLRINLNLIHDH-NPEVFLQNVETFIRQIDCVNHINLFFTELKEEDVTKTMYPP----P 801
Query: 790 LPCREEFKDLPAKDFKASECNKVSSVLLAIRKALEEKVPESPSRELCILTTLARSDPPAL 849
+P + P K+ + A+R A+E P L ILT+ + P L
Sbjct: 802 VPSSVQQSRDPGG-------TKLDLICDALRVAMENINPHKYC--LPILTSHVKKTTPEL 852
Query: 850 EEALERIKIIRETELLGSDEPRRMSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLAAI 909
E L+++ EL G + P SAEEALK+LL L D +Y+ +LG YD +L +
Sbjct: 853 EIVLQKVH-----ELQG-NAPSDPDAVSAEEALKYLLLLVDVNELYDHSLGTYDFDLVLM 906
Query: 910 VALNSQRDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLM 969
VA SQ+DPKE+LP+L L+ M R+TID L+R+E A+ H+ G Y ++CLNL+
Sbjct: 907 VAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEYFSECLNLI 966
Query: 970 KKYAQLFPLGLKLITDPAK-MEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRA 1028
K L+ LKL ++ + + A+ +HL + +E A + C + EKA+ A+
Sbjct: 967 KD-KNLYNEALKLYPPTSQEYKDISIAYGEHLMEEHQYEPAGLVFARCGAHEKALSAFLT 1025
Query: 1029 SGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYCGDVTNGISLLI 1088
G+W L +A L + ++++A L + L +L K +AA + Y D + LL+
Sbjct: 1026 CGSWQQTLCMAAQLNMTEEQLAGLGRTLAGKLAEQRKHSDAAIVLEQYTQDYEEAVLLLL 1085
Query: 1089 DARDWEEALRVAFMHRREDLI-TKVKHASLECASSLIGEYKEGLEKVGKYLTRYLAVRQR 1147
+ WEEALR+ + + R D+I T +K + LE + Y LE +R+ +
Sbjct: 1086 EGAAWEEALRLVYKYNRLDIIETNIKPSILEAYKN----YMAFLESQSATFSRH----KE 1137
Query: 1148 RLLLVAKLQSEDRSMNDLDD--------DTVSETSSTFSGMSVYTTGTRKSSAASIKSTA 1199
RLL V +L+ + + DLDD D SETSS SG + + K S ++ + +A
Sbjct: 1138 RLLEVRELKERAQQV-DLDDEMPHGQEADLFSETSSIVSGSEM----SSKYSHSNSRISA 1192
Query: 1200 ASKARESKRQRNRGKIRPGSPGEEMALVDHLKGMSLTVGA-KQELKSLVVFLVMLGEVDT 1258
S K +R + ++ GSP E++AL++ L + ++ K E+ ++ L + +
Sbjct: 1193 RSSKNRRKAERKKHSLKEGSPLEDLALLEALNEVVQSLDKLKDEVYRILKVLFLFEFDEQ 1252
Query: 1259 ARKLQDT-GETFQL 1271
R+LQ T +T QL
Sbjct: 1253 GRELQKTFQDTLQL 1266
>sp|Q8VHU4|ELP1_RAT Elongator complex protein 1 OS=Rattus norvegicus GN=Ikbkap PE=2 SV=1
Length = 1331
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 372/1307 (28%), Positives = 604/1307 (46%), Gaps = 181/1307 (13%)
Query: 56 RASIKTAISAEIEHIDLEPGDS-ITAFDYLMEKEALIVGTSSGLLLLHSVDGNATEVVGR 114
+ +KT IS E E G I L+++E++ V T+SG +++ +V E VG
Sbjct: 48 KKEVKTEISLVAEGFLPEDGSGCIVGIQDLLDQESVCVATASGDVIVCNVSTQQLECVGN 107
Query: 115 VEGGVRFISPSPDGDLLGVTTGFGQILVMTHDWDLLYENPL--EELAEG----------- 161
V G+ +S SPD +LL + T +++MT D++++ E + ++ EG
Sbjct: 108 VASGISVMSWSPDQELLLLATAQQTLIMMTRDYEVITEQQIHQDDFGEGKFITVGWGSKD 167
Query: 162 ------------FDVHEPELSSSFSFKSP-ISWRGDGKYFATLSEFCNSSKLHKRLKVWE 208
F V E + S+ P I+WRGDG++FA +S C+ + ++++VW
Sbjct: 168 TQFHGSEGRPITFPVQMHESALSWDDHRPQITWRGDGQFFA-VSVVCSQTGA-RKIRVWN 225
Query: 209 RDSGTLQASSELKAFMGAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDIN 268
R+ LQ++SE +G L W PSG+ IA+ D+ ++ +VF+E+NGL F +
Sbjct: 226 REFA-LQSTSESVPGLGPSLAWKPSGSLIASTQDKPNQQ---DVVFFEKNGLLHGYFTLP 281
Query: 269 EQIDST-VELLKWNCMSDLLAAVVRFEEYDS---------VKICFFSNNHWYLKYEIRYL 318
D V L WN S +LA V E+ V++ N HWYLK + +
Sbjct: 282 FLKDEVKVNDLLWNADSSVLA--VWLEDLPKEGSSTLKSYVQLWTVGNYHWYLKQSLPFS 339
Query: 319 ---RRDGIRFMWHPTKPLQLICWTLDGQITTYNFIWTTAVMENSTA------LVIDGSKI 369
+ + +W P P +L + ++ WTT ++A VIDG+K+
Sbjct: 340 TTGKNQIVSLLWDPVTPGRLHVLCQGWRYLCCDWHWTTDRSSGNSADDLANVAVIDGNKV 399
Query: 370 LVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLP-APDM- 427
LVT ++ PPPM + L P V ++ S N LA + + + V PDM
Sbjct: 400 LVTVFQRTVTPPPMCTYRLLIPHPVNQV-MSSAHLGNDLAVLDASNQISVYKCDDKPDMD 458
Query: 428 ----LEDLEGTEFVV--------------------EACISETAFGSVIHLIWLGSHLLLS 463
L + GT F V E +S F L W+ L+
Sbjct: 459 STVKLGAVGGTGFKVPLRTPHLEKRYRIQFGNKEEEEDVSPLQFR---FLTWIEGDAFLA 515
Query: 464 VSH-HGPRHSNYFRGATLNEDGLLGFYAQEIELACSE-DHVQGLLTCAGWHAKVSTQIPL 521
+SH H S + +A SE D QG L VS+ + +
Sbjct: 516 ISHSHSSPQS----------------IIHHLTMAGSEGDEEQGQLN-------VSSSVTV 552
Query: 522 EGLVIAIAPNNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHDD----ASFPSSCPWMNV 577
+G+VI + + K SA +Q G++ +Y+ + + F C M
Sbjct: 553 DGVVIGLCCCSKTKSSA-VQLADGQVLKYLWESPSSAVEPWKNSEGRPVRFARPCTQMEA 611
Query: 578 VSVGTNGPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLF 637
++G + + GL D R ++ V +N +SF+ L++ T +
Sbjct: 612 AAIGG----EECVLGLTDRCRFFINDTEVASNITSFAVCD-------DFLLVTTHSHTCQ 660
Query: 638 IVDISDILHGELALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNR 697
+S +LK G++ I + ERG++++ V+ D +ILQ R
Sbjct: 661 CFSLSGA-----SLKMLQAGLCGSQVPSGEI--LRKVERGSRIVTVVPQD-TKLILQMPR 712
Query: 698 GNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVR 757
GNLE ++ R LVL I L + F++A +R+ RIN N+I DH + FL++ F++
Sbjct: 713 GNLEVVHHRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIHDH-NPKVFLENVETFIK 771
Query: 758 QVNNLSYITEFVCAINNENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNKVSSVLL 817
Q+++++++ F + E++T+T+Y P + + D K KV +
Sbjct: 772 QIDSVNHLNLFFTELKEEDVTKTMYPP------PVTKSVQVSTNPDGK-----KVDLICD 820
Query: 818 AIRKALEEKVPESPSRELC--ILTTLARSDPPALEEALERIKIIRETELLGSDEPRRMSY 875
A+R A+E P R+ C ILT+ + P L+ L+++ EL G P
Sbjct: 821 AMRVAMETINP----RKFCLSILTSHVKKTTPELDIVLQKVH-----ELQGKI-PFVPES 870
Query: 876 PSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLL 935
SAEEALK+LL L D ++ +LG YD +L +VA SQ+DPKE+LP+L L+ M
Sbjct: 871 VSAEEALKYLLLLVDVNELFNHSLGTYDFDLVLMVAEKSQKDPKEYLPFLNTLKKMETNY 930
Query: 936 MRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLI-TDPAKMEQVLE 994
R+TID L+R+E AL H+ G Y +CLNL+K L+ LKL D + + V
Sbjct: 931 QRFTIDKYLKRYEKALGHLSKCGPEYFTECLNLIKD-KNLYKEALKLYRPDSPQYQAVSV 989
Query: 995 AWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQ 1054
A+ +HL +E A + C + EKA++A+ A G+W L +A L++ KD+VA LA+
Sbjct: 990 AYGEHLVQELLYEPAGLVFARCGAHEKALEAFLACGSWQQALCMAAQLQMAKDKVAGLAR 1049
Query: 1055 ELCEELQALGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLI-TKVK 1113
L +L K EAA + Y D + LL++ WEEALR+ + + R D+I T VK
Sbjct: 1050 TLAGKLVEQRKHSEAATVLEQYALDYEEAVLLLLEGSAWEEALRLVYKYDRVDIIETSVK 1109
Query: 1114 HASLECASSLIGEYKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSM-------NDLD 1166
+ LE + Y + L+ R+ + RL +V +L+S+ + + +
Sbjct: 1110 PSILEAQKN----YMDFLDSQTATFIRH----KNRLKVVRELKSQRPRVHVDHEVAHGRE 1161
Query: 1167 DDTVSETSSTFSGMSVYTTGTRKSSAASIKSTAASKARESKRQRNRGKIRPGSPGEEMAL 1226
D SETSS SG + R S + S S +SK R K +R + ++ GSP E +AL
Sbjct: 1162 TDLFSETSSIRSGSEM---SGRYSHSNSRISARSSKNRR-KAERKKHSLKEGSPLEGLAL 1217
Query: 1227 VDHLKGMSLTVGA-KQELKSLVVFLVMLGEVDTARKLQDTGE-TFQL 1271
++ L + ++ K E+ +++ L + + AR+LQ E T QL
Sbjct: 1218 LEALSEVVQSIEKLKDEVHAILKVLFLFEFEEQARELQRAFESTLQL 1264
>sp|Q2TAQ1|ELP1_XENLA Putative elongator complex protein 1 OS=Xenopus laevis GN=ikbkap PE=2
SV=1
Length = 1170
Score = 345 bits (884), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 303/1075 (28%), Positives = 501/1075 (46%), Gaps = 101/1075 (9%)
Query: 176 KSPISWRGDGKYFATLSEFCNSSKLHKRLKVWERDSGTLQASSELKAFMGAVLEWMPSGA 235
K I+WRGDG+ FA +S C S ++++VW R+ LQ++SE + L W PSGA
Sbjct: 46 KPRITWRGDGQLFA-VSSVCKESGT-RKIRVWNRELA-LQSTSESIEGLEQALSWKPSGA 102
Query: 236 NIAAVYDRKSENKCPSIVFYERNGLERSSFDI---NEQIDSTVELLKWNCMSDLLAAVVR 292
IA+ + +++ S++F+E+NGL F + QI V+ L WN S +LA +
Sbjct: 103 LIASSQSKPNKH---SVIFFEKNGLVHGEFTLPFTKGQI--KVKELLWNSDSTILAIWLE 157
Query: 293 FEEYDS------VKICFFSNNHWYLKYEIRYLRRDGIR---FMWHPTKPLQLICWTLDGQ 343
E D V++ N HWYLK + + + + MW P +L ++
Sbjct: 158 DNEKDESSSGCCVQLWTVGNYHWYLKQSLNFGTDEMKKIECLMWDPENAYRLHVFSTGWH 217
Query: 344 ITTYNFIWTTAVMENSTA--LVIDGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYS 401
+++ W T + VIDG K+LVT +++PPPM + ++ AV E+ F
Sbjct: 218 YFCFDWFWGTDHSDGGQGDVAVIDGDKVLVTSFQQAVVPPPMSTYFIQLSCAVNEVTFQL 277
Query: 402 KSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAFGSVIHLIWLGSHLL 461
+ KN AIL + + + D V +S F + L L
Sbjct: 278 EPKKNSGIAILDSTNILSIYRYGNSTVND----PTVKLGAVSGNGFRTSSQTPKLEKKLR 333
Query: 462 LSVSHHGPRHS-----NYFRGATLNEDGLLGFYAQEIELACSEDHVQGLLTCAGWHAKVS 516
L PR++ FR T +D +QE + S H G V
Sbjct: 334 L------PRNACDVQLRSFRLLTWVQDDTFLAVSQESNSSISTVHHMNTDQMDGQDINVR 387
Query: 517 TQIPLEGLVIAIAPNNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHD----DASFPSSC 572
+ G +I++ + K+ A LQ GKI +Y+ D + FP C
Sbjct: 388 DVGTITGHIISLCYSPNTKHCA-LQTSNGKIWKYLCEYPTPAVEPWIDSMGQEVKFPQPC 446
Query: 573 PWMNVVSVGTNGPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATK 632
+ S+ + ++ GL + RL ++ V +N +SF Y + L+L T
Sbjct: 447 VQTALASIEG----EDMVIGLTERSRLFINNSEVASNITSFHLYEE-------FLLLTTH 495
Query: 633 QNLLFIVDISDILHGELALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVI 692
+ V + D L + N N I ERG+++I V+ D +I
Sbjct: 496 SHTCRCVSLRDTSLKALETQL-------NSASNPNDETIRKVERGSRIITVVPCD-TKLI 547
Query: 693 LQTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSA 752
LQ RGNLE ++ R LVL I L + F++A +R+ RIN N++ DH +AFL +
Sbjct: 548 LQMPRGNLETIHHRALVLAQIRKWLDRLLFKEAFECMRKLRINLNLLYDHNP-KAFLDNV 606
Query: 753 SEFVRQVNNLSYITEFVCAINNENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNKV 812
F++Q+ +++YI F+ I E++T+T+Y ++ E ++ KV
Sbjct: 607 DLFIKQIGSVNYINLFLTEIKEEDVTKTMYPTHALSTMQSSE-----------GAKAKKV 655
Query: 813 SSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERIKIIRETELLGSDEPRR 872
V A+R A+E+ P+ L ILT+ R P LE AL+++ +RE+
Sbjct: 656 DIVCDAVRAAMEKWDPQKFC--LSILTSYVRRTIPQLEIALQKVHELRESP--------S 705
Query: 873 MSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMP 932
+ SA+EALK+LL+L D +Y+ +LG YD +L +VA SQ+DPKE+LP+L +L+ M
Sbjct: 706 TTIVSADEALKYLLFLVDVNELYDHSLGTYDFDLVVMVAEKSQKDPKEYLPFLNKLKKME 765
Query: 933 PLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYA------QLFPLGLKLITDP 986
RYTID L+R++ AL ++ G Y + L+ +K + +L+P G
Sbjct: 766 TNYQRYTIDKHLKRYKKALSNLSKCGPDYFTEFLSFVKDQSLYTEALELYPHG------T 819
Query: 987 AKMEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGK 1046
+ + + A+ DHL + +E A Y C+S+EKA+ A+ ASGNW V+ +A L+
Sbjct: 820 VEYKAINAAYGDHLVSKQQYELAGLIYARCNSIEKALDAFIASGNWHQVMCMASQLEYSG 879
Query: 1047 DEVAKLAQELCEELQALGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRRE 1106
+++A LA+ + +L K +AA + Y D I LL++ WEEALR+ + + R
Sbjct: 880 EKIAALARTVAGKLVEQRKQADAAVLLEQYAEDYEEAILLLLEGAHWEEALRLIYKYIRL 939
Query: 1107 DLI-TKVKHASLECASSLIGEYKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 1165
D++ T +K A L+ + + + ++ R VR+ + L ED +
Sbjct: 940 DILETNLKPALLDAQRNHMILFDNQKTTFTRHKERLSVVREMKEKARLGLLDEDVT-GCA 998
Query: 1166 DDDTVSETSSTFSGMSVYTTGTRKSSAASIKSTAASKARESKRQRNRGKIRPGSP 1220
+ D S+TSS + + + K S ++ + ++ S K +R + ++ GSP
Sbjct: 999 EADLFSDTSSIMTA----SDASGKYSQSNSRISSRSSKNRRKAERKKHSLKEGSP 1049
>sp|Q9VGK7|ELP1_DROME Putative elongator complex protein 1 OS=Drosophila melanogaster
GN=Elp1 PE=1 SV=2
Length = 1252
Score = 286 bits (732), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 342/1321 (25%), Positives = 571/1321 (43%), Gaps = 246/1321 (18%)
Query: 1 MNNLKL--CAEV-----PLNLELQSKDEILQFSALDIEQNRLFFASSANNIYSAQLSSFQ 53
M NLKL C E+ P +L LQ + L A DI +F + N IY+ Q
Sbjct: 1 MRNLKLRYCKELNAVAHPQHLLLQPE---LNGGASDI-----YFVVADNKIYAVQ----- 47
Query: 54 NERASIKTAISAEIEHIDLEPGDSITAFDYLMEKEALIVGTSSGLLLLHSVDGNATEVVG 113
E ++ + A++ I ++L A+ V + +G ++L AT
Sbjct: 48 -ESGDVRLKVIADLP--------DIVGVEFLQLDNAICVASGAGEVILVDPQTGATSEGT 98
Query: 114 RVEGGVRFISPSPDGDLLGVTTGFGQILVMTHDWDLLYENPLE-EL-------------- 158
+ G+ ++ SP+ +++ T +++MT +D++ E PL+ EL
Sbjct: 99 FCDVGIESMAWSPNQEVVAFVTRTHNVVLMTSTFDVIAEQPLDAELDPDQQFVNVGWGKK 158
Query: 159 ------AEG------------FDVHEPELSSSFSFKSPISWRGDGKYFATLSEFCNSSKL 200
+EG F E EL+ S ISWRGDG++F +++L
Sbjct: 159 ETQFHGSEGKQAAKQKESDSTFIRDEQELNQDVS----ISWRGDGEFFVV---SYVAAQL 211
Query: 201 HKRLKVWERDSGTLQASSELKAFMGAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGL 260
+ KV++ + G L ++E A + + W P+G IA ++ NK +I +E+NGL
Sbjct: 212 GRTFKVYDSE-GKLNHTAEKSANLKDSVVWRPTGNWIAV--PQQFPNKS-TIALFEKNGL 267
Query: 261 ERSS----FDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSNNHWYLKYEIR 316
FD+ E+ V L+W+ SD+LA +E V + N HWYLK +
Sbjct: 268 RHRELVLPFDLQEE---PVVQLRWSEDSDILAIRTCAKEEQRVYLYTIGNYHWYLKQVLI 324
Query: 317 YLRRDGIRFMWHPTKPLQLICW-TLDGQITTYNFI----------WTTAVMENSTAL-VI 364
+ + D PL L+ W T G T + + W AV N++ + VI
Sbjct: 325 FEQAD----------PLALLHWDTRCGAEHTLHVLKESGKHLVYRWAFAVDRNNSIVGVI 374
Query: 365 DGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSK----NCLAAILSDGCLCVV 420
DG ++L+T +++PPPM LKF T + AF S + C I + + +
Sbjct: 375 DGKRLLLTDFDEAIVPPPMSKIVLKFETYIN--AFISHGTSLWVYTCDRKIYLNEHIHTL 432
Query: 421 --DLPAPDMLEDLEGTEFVVEACISETAFGSVIHLIWLGSHLLLSVSHHGPRHSNYFRGA 478
+L P ML + +A +S ++ H H LL+ +H + +
Sbjct: 433 GKELQKPIML--------MPDAELSGLHLANLTHF---SPHYLLA-THSSAGSTRLLLLS 480
Query: 479 TLNEDGLLGFYAQEIELACSEDHVQGLLTCAGWHAKVSTQIPLEGLV--IAIAP------ 530
+ D G W +V + + + GLV +A+AP
Sbjct: 481 YKDNDNKPG----------------------EWFYRVHSSVRINGLVNAVAVAPYAMNEF 518
Query: 531 -----NNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHDDASFPSSCPWMNVVSVGTNGP 585
NN Y L+ E S V L A D C W G G
Sbjct: 519 YVQTVNNGHTYEVSLKADKTLKVE-RSYVQLHEPA-DQIDWVIVKGCIWD-----GYTGA 571
Query: 586 LKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLFIVDISDIL 645
L L + LH+ G + + +SF +++ ++ T+ N + V + D
Sbjct: 572 L----VTLRNQHLLHIDGYRIGEDVTSFC--------VVTNYLVYTQLNAMHFVQLDD-- 617
Query: 646 HGELALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNRGNLECMYP 705
RR+ ++ NI ERGAK++ + +A V+LQ RGNLE + P
Sbjct: 618 ----------------RRQ---VASRNI-ERGAKIVTAV-ARKARVVLQLPRGNLEAICP 656
Query: 706 RKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVRQVNNLSYI 765
R LVL + + L +G+++ A+ M R+ RIN N+I DH + F+ S F+ +N ++
Sbjct: 657 RVLVLELVGDLLERGKYQKAIEMSRKQRINLNIIFDH-DVKRFVSSVGAFLNDINEPQWL 715
Query: 766 TEFVCAINNENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNKVSSVLLAIRKALEE 825
F+ + NE+ T+ +Y S K D++ + KV V + LE+
Sbjct: 716 CLFLSELQNEDFTKGMYSSNYDAS-------KQTYPSDYRVDQ--KVEYVC----RLLEQ 762
Query: 826 KVPESPSRELCILTTLARSDPPALEEALERI-KIIRETELLGSDEPRRMSYPSAEEALKH 884
++ SR L T A LE AL+ I K +E L A++ L+H
Sbjct: 763 QMNRFVSRFRLPLIT-AYVKLGCLEMALQVIWKEQQEDASL------------ADQLLQH 809
Query: 885 LLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMRYTIDLRL 944
LL+L D +Y ALG YD L VA SQ+DPKEFLPYL +L+++P ++ ID L
Sbjct: 810 LLYLVDVNDLYNVALGTYDFGLVLFVAQKSQKDPKEFLPYLNDLKALPIDYRKFRIDDHL 869
Query: 945 QRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLITDPAKMEQ-VLEAWADHLSDV 1003
+R+ +AL H+ + G+ ++ + L ++K+ L+ GL + + ++ + A+ADHL +
Sbjct: 870 KRYTSALSHLAACGEQHYEEALEYIRKHG-LYTDGLAFYREHIEFQKNIYVAYADHLRAI 928
Query: 1004 KCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQAL 1063
++A+ Y L++A+ + + + +W VL +A L D+V AQ L LQ
Sbjct: 929 AKLDNASLMYERGGQLQQALLSAKHTLDWQRVLVLAKKLSEPLDQV---AQSLVGPLQQQ 985
Query: 1064 GKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSL 1123
G+ EA ++ ++C D +L++ + A+ A + +D+ K+ A L L
Sbjct: 986 GRHMEAYELVKEHCQDRKRQFDVLLEGHLYSRAIYEAGL-EDDDVSEKIAPALLAYGVQL 1044
Query: 1124 IGEYKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDLD--DDTVSETSSTFSGMS 1181
+ L+ Y R L +R+ + D ++ ++D DT S SS +SG S
Sbjct: 1045 ESSLQADLQLFLDYKQRLLDIRRNQAKSGEGYIDTDVNLKEVDLLSDTTSLHSSQYSGTS 1104
Query: 1182 VYTTGTRKSSAASIKSTAASKARESKRQRNRGKIRPGSPGEEMALVDHLKGMSLTVGAKQ 1241
T T +SS K +R ++PG+P E++AL+D L + +Q
Sbjct: 1105 RRTGKTFRSS-----------KNRRKHERKLFSLKPGNPFEDIALIDALHNHVTKIAQQQ 1153
Query: 1242 E 1242
+
Sbjct: 1154 Q 1154
>sp|O59704|ELP1_SCHPO Elongator complex protein 1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=iki3 PE=3 SV=1
Length = 1253
Score = 276 bits (705), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 306/1248 (24%), Positives = 537/1248 (43%), Gaps = 179/1248 (14%)
Query: 76 DSITAFDYLMEKEALIVGTSSGLLLLHSVDGNATE----VVGRVEGGVRFISPSPDGDLL 131
D I + +L E A+ + G +++ VD + E ++G VE G+ S D +
Sbjct: 74 DEIQSMQFLGEPMAICLSLKGGDIVMVKVDPSPEEAPWEIIGNVENGIVASCWSTDEQVF 133
Query: 132 GVTTGFGQILVMTHDWDLLYENPLEE---------------------------------- 157
+ TG IL MT ++D++ E L +
Sbjct: 134 CIITGGDTILFMTKNFDIISETSLSDADLNEFNKHISVGWGRSETQFRGKRVRAKLRDPT 193
Query: 158 LAEGFDVHEPELSSSFSFKSPISWRGDGKYFATLSEFCNSSKLHK----RLKVWERDSGT 213
L E D E +LS K+ I WRGD +Y + ++L K ++V+ R+ G
Sbjct: 194 LPEKID--EGKLSDVDDGKTYICWRGDSQYVSI-------NRLEKGPRRAIRVYSRE-GL 243
Query: 214 LQASSELKAFMGAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDS 273
L + SE + ++L W PSG+ +A + S+N ++F+ERNGL F + + D
Sbjct: 244 LDSISEPQDGQQSLLSWKPSGSVLATIKSDSSDNSS-KVIFFERNGLRHGEFSLRRREDE 302
Query: 274 TVELLKWNCMSDLLAAVVRFEEYDSVKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPL 333
L WN S +LA +SV + N HWYLK EI + I WHP
Sbjct: 303 KYTGLAWNVSSSILAVSTE----NSVMLWTTGNYHWYLKKEINIPQNALIS--WHPEHAN 356
Query: 334 QLICWT---LDGQITTYNFIWTTAVMENSTAL--VIDGSKILVTPLSLSLMPPPMYLFSL 388
L ++ + ++ + N L VIDGS +LVTPLSL +PPPM + L
Sbjct: 357 TLYITGKNHIEKVVFDLKYVTEFSTSPNDFGLIPVIDGSSLLVTPLSLCNIPPPMCRYKL 416
Query: 389 KFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAFG 448
V +M + +S AA D L + + + EF + F
Sbjct: 417 SLDYNV-QMTSINATSDMLFAA--DDRRLTAFTFNSQEDIAKF--GEFDISTYAEGLNFK 471
Query: 449 SVIHLIWLGSHLLLSVSHHGPRHSNYFRGATLNEDGLLGFYAQEIELACSEDHVQGLLTC 508
S++ L G+ +LL G + + F +ED + ++L SE +L
Sbjct: 472 SLLGLS--GNQVLLLAD--GTNNCSKFFVFQCDEDN------ESLKLLASESFESCILN- 520
Query: 509 AGWHAKVSTQIPLEGLVIAIAPNNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHDDASF 568
A + +++ F Q GK+ Y L ++ SF
Sbjct: 521 ASYCSEM----------------------LFFQTSSGKLISY----NLNVKSIESISLSF 554
Query: 569 PSSCPWMNVVSVGTNGPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLI 628
P C + V V + P+ GL GRL+ +++ SF + ++
Sbjct: 555 PKPCS--DFVVVPVHETFVPI--GLTSYGRLYAEQRLLSTGVLSFFCTER-------FVL 603
Query: 629 LATKQNLLFIVDISDILHGELALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDE 688
T +NLL V L ++ V + + + + ERG+K++ + +
Sbjct: 604 FTTTKNLLKFV--------HLVSTVDDLQVVEDDAVDRHDERCRVVERGSKIVASMPS-K 654
Query: 689 AAVILQTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAF 748
AV+LQ RGNLE +YPR +VL + + ++ DA + R HR++ N++ D+ F
Sbjct: 655 MAVVLQMPRGNLETIYPRIMVLDGVRTYIKALKYGDAFKVCRTHRLDLNILFDY-DPDLF 713
Query: 749 LQSASEFVRQVNNLSYITEFVCAINNENITETLYKKFQFLSLPCREEFKDLPAKDFKASE 808
L++ FV + + Y+ F+ ++ EN+T +Y + ++ +
Sbjct: 714 LKNIPVFVDGLYRVDYLDLFLTSLKPENVTTGMYS-----------DTSKSQSQQSVTTI 762
Query: 809 CNKVSSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERIKIIRETELLGSD 868
NKV+ + IR+ L K ++ + I+T+ PP +E AL I + + +
Sbjct: 763 DNKVNLLCKIIREHLTSKYGDTHFQ--AIITSYLCESPPKIEAALGMISGLIKAQ----- 815
Query: 869 EPRRMSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQEL 928
+ + A++H+ +L D +++ ALGLYDL LA ++A SQ+DP+E++P+L E
Sbjct: 816 ------SETVDLAIEHMCFLVDVNMLFDHALGLYDLKLALLIAQQSQKDPREYVPFLHEF 869
Query: 929 ESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLIT-DPA 987
+ L ++ ID L+R+E AL H+ M +++ D +L+P L+L D
Sbjct: 870 QKQESLRRKFNIDCYLKRYERALGHLKEMENAF--DEFKNFTIQHKLYPRALELYKYDKE 927
Query: 988 KMEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKD 1047
++VL +A +L + +AA Y + +A++AY+++G W L++ +D
Sbjct: 928 AQKEVLIIFAQYLRENGKSNEAAIAYESVGKISEAIEAYKSAGMWRECLSILQQTTNSED 987
Query: 1048 EVAKLAQELCEELQALGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRR-- 1105
+ + A++L + +A I L Y + + + + EA+R+A
Sbjct: 988 LIRETAEDLASLCIEKREHCDAGSINLLYLSNPREAVIQMCKGSQYSEAIRIARATGDSS 1047
Query: 1106 --EDLITKVKHASLECASSLIGEYKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDR--- 1160
+DL+ V S AS L+ +++ ++ + R+L++ + + ED
Sbjct: 1048 IYKDLLISVLGESFGEASELVADFRNQIKS-----------QTERILVLREKKKEDPISW 1096
Query: 1161 ---SMNDLDDDTVSETSSTFS-GMSVYTTGTRKSSAASIKSTAASKARESKRQRNRGKIR 1216
+M D D +S S++ S S+YT T+ S+++ + + R +R+R RGK
Sbjct: 1097 MEGTMEDQTPDDISLASTSLSTNRSLYTQYTKSSNSSKMTRNTSKNNRRLERKRARGK-- 1154
Query: 1217 PGSPGEEMALVDHLKGMSLTVGA-KQELKSLVVFLVMLGEVDTARKLQ 1263
G+ EE LV+ L+ + V + E+ L+ LV A +LQ
Sbjct: 1155 KGTVFEEEYLVNSLRRLIARVEEIRPEVHRLLEALVRCNMTTQASELQ 1202
>sp|Q06706|ELP1_YEAST Elongator complex protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=IKI3 PE=1 SV=1
Length = 1349
Score = 197 bits (500), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 167/622 (26%), Positives = 303/622 (48%), Gaps = 58/622 (9%)
Query: 591 FGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLFIVDISDILHGELA 650
FG+ + G+L + ++ + +S S L+ T Q+ L V ++ L
Sbjct: 645 FGITNNGKLFANQVLLASAVTSLEITD-------SFLLFTTAQHNLQFVHLNSTDFKPLP 697
Query: 651 LKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVL 710
L E ++E + I ERG+ ++ V+ +++V+LQ RGNLE +YPR +VL
Sbjct: 698 LVEEGV-------EDERVRAI---ERGSILVSVIPS-KSSVVLQATRGNLETIYPRIMVL 746
Query: 711 TSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEFVC 770
+ ++ R+++A ++ R HRIN +++ D+ + F+++ F+ Q+ + Y+ F+
Sbjct: 747 AEVRKNIMAKRYKEAFIVCRTHRINLDILHDYAP-ELFIENLEVFINQIGRVDYLNLFIS 805
Query: 771 AINNENITETLYKK---------FQFLSLPCREEFKDLPAKDF--KASECNKVSSVLLAI 819
++ +++T+T YK+ F P E + K F K S+ NK+ +L +
Sbjct: 806 CLSEDDVTKTKYKETLYSGISKSFGMEPAPLTEMQIYMKKKMFDPKTSKVNKICDAVLNV 865
Query: 820 RKALEEKVPESPSREL-CILTTLARSDPPALEEALERIKIIRETELLGSDEPRRMSYPSA 878
+ PE + L I+T A +P L AL+ I +EL S+E
Sbjct: 866 LLS----NPEYKKKYLQTIITAYASQNPQNLSAALKLI-----SELENSEE--------K 908
Query: 879 EEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMRY 938
+ + +L +L D VY++AL LYD++LA +VA SQ DP+E+LP+LQEL+ PL ++
Sbjct: 909 DSCVTYLCFLQDVNVVYKSALSLYDVSLALLVAQKSQMDPREYLPFLQELQDNEPLRRKF 968
Query: 939 TIDLRLQRFENALKHI--VSMGDSYHADCLNLMKKYAQLFPLGLKLIT-DPAKMEQVLEA 995
ID L +E AL+H+ + + + ++ ++ + L+ GL L D K +
Sbjct: 969 LIDDYLGNYEKALEHLSEIDKDGNVSEEVIDYVESH-DLYKHGLALYRYDSEKQNVIYNI 1027
Query: 996 WADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQE 1055
+A HLS + + DAA Y L++AM AY+++ W +++A ++ +EV +A+E
Sbjct: 1028 YAKHLSSNQMYTDAAVAYEMLGKLKEAMGAYQSAKRWREAMSIA--VQKFPEEVESVAEE 1085
Query: 1056 LCEELQALGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHA 1115
L L + +AA I L+Y +V ++L A ++ A VA ++++L+ +V
Sbjct: 1086 LISSLTFEHRYVDAADIQLEYLDNVKEAVALYCKAYRYDIASLVAIKAKKDELLEEVVDP 1145
Query: 1116 SLECASSLIGEYKEGLE-KVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDLDDDTVSETS 1174
L +I E + ++ L R +R ++ ++ D SETS
Sbjct: 1146 GLGEGFGIIAELLADCKGQINSQLRRLRELRAKKEENPYAFYGQETEQADDVSVAPSETS 1205
Query: 1175 STFSGMSVY---TTGTRKSSAA 1193
+ S + Y T GT K+ A+
Sbjct: 1206 TQESFFTRYTGKTGGTAKTGAS 1227
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 142/295 (48%), Gaps = 38/295 (12%)
Query: 179 ISWRGDGKYFATLS------EFCNSSKLHKR-LKVWERDSGTLQASSELKAFMGAVLEWM 231
ISWRGD YFA S E + + +R +V+ R+ G L ++SE M L W
Sbjct: 253 ISWRGDCDYFAVSSVEEVPDEDDETKSIKRRAFRVFSRE-GQLDSASEPVTGMEHQLSWK 311
Query: 232 PSGANIAAVYDRKS---ENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLA 288
P G+ IA++ RK+ E ++F+ERNGL FD +D VE + WN S+ LA
Sbjct: 312 PQGSLIASI-QRKTDLGEEDSVDVIFFERNGLRHGEFDTRLPLDEKVESVCWNSNSEALA 370
Query: 289 AVVRFEEYDSVKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQITTYN 348
V+ + +++ N HWYLK E+ D WHP K L+ ++ G I +
Sbjct: 371 VVLA----NRIQLWTSKNYHWYLKQEL--YASDISYVKWHPEKDFTLM-FSDAGFINIVD 423
Query: 349 FIWTTAV------MENSTALVIDGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSK 402
F + A +N T+LV+DG + +TPL+L+ +PPPMY + P V ++A
Sbjct: 424 FAYKMAQGPTLEPFDNGTSLVVDGRTVNITPLALANVPPPMYYRDFETPGNVLDVAC--- 480
Query: 403 SSKNCLAAILSDGCLCVVDLPA---------PDMLEDLEGTEFVVEA-CISETAF 447
S N + A ++ L +P+ P ++ + +EF E + + AF
Sbjct: 481 SFSNEIYAAINKDVLIFAAVPSIEEMKKGKHPSIVCEFPKSEFTSEVDSLRQVAF 535
>sp|Q5DM57|IF172_CHLRE Intraflagellar transport protein 172 OS=Chlamydomonas reinhardtii
GN=IFT172 PE=1 SV=1
Length = 1755
Score = 37.7 bits (86), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 65/170 (38%), Gaps = 13/170 (7%)
Query: 945 QRFENALKHIVSMGDSYHA-----DCLNLMKKYAQLFPLGLKLITDPAKMEQVLEAWADH 999
++ + A+ H + G + A DC K G+ + DP + A H
Sbjct: 872 KQMDAAINHFIESGATLKAIKAAIDCRQFAK------AAGIIEVLDPREAMPYFRRIAQH 925
Query: 1000 LSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEE 1059
E+A Y A++ Y +G W VA L + E+ + E
Sbjct: 926 YETTGALEEAERYYIRADMARDAVEMYSRAGKWEAAQRVARGY-LTESEMRAFYRAKAAE 984
Query: 1060 LQALGKPGEAAKIALDYCG-DVTNGISLLIDARDWEEALRVAFMHRREDL 1108
+A K EA K L G DV I++ + +++ +R+ +R+E +
Sbjct: 985 FEAAHKLKEAEKAYLAAGGDDVDKAIAMYKRNKMYDQMIRLVTQYRKEKV 1034
>sp|C1EP29|PNP_BACC3 Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus (strain
03BB102) GN=pnp PE=3 SV=1
Length = 712
Score = 37.7 bits (86), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 1007 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 1066
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 1067 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 1126
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 1127 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 1165
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|Q6HF08|PNP_BACHK Polyribonucleotide nucleotidyltransferase OS=Bacillus thuringiensis
subsp. konkukian (strain 97-27) GN=pnp PE=3 SV=1
Length = 712
Score = 37.7 bits (86), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 1007 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 1066
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 1067 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 1126
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 1127 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 1165
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|Q636L9|PNP_BACCZ Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus (strain
ZK / E33L) GN=pnp PE=3 SV=1
Length = 712
Score = 37.7 bits (86), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 1007 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 1066
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 1067 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 1126
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 1127 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 1165
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|B7JJ84|PNP_BACC0 Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus (strain
AH820) GN=pnp PE=3 SV=1
Length = 712
Score = 37.7 bits (86), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 1007 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 1066
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 1067 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 1126
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 1127 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 1165
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|A0RHH8|PNP_BACAH Polyribonucleotide nucleotidyltransferase OS=Bacillus thuringiensis
(strain Al Hakam) GN=pnp PE=3 SV=1
Length = 712
Score = 37.7 bits (86), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 1007 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 1066
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 1067 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 1126
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 1127 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 1165
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|C3L7C0|PNP_BACAC Polyribonucleotide nucleotidyltransferase OS=Bacillus anthracis
(strain CDC 684 / NRRL 3495) GN=pnp PE=3 SV=1
Length = 712
Score = 37.7 bits (86), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 1007 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 1066
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 1067 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 1126
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 1127 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 1165
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|B9IV96|PNP_BACCQ Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus (strain
Q1) GN=pnp PE=3 SV=1
Length = 712
Score = 37.7 bits (86), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 1007 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 1066
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 1067 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 1126
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 1127 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 1165
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|B7HLE0|PNP_BACC7 Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus (strain
AH187) GN=pnp PE=3 SV=1
Length = 712
Score = 37.7 bits (86), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 1007 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 1066
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 1067 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 1126
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 1127 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 1165
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|Q81WM8|PNP_BACAN Polyribonucleotide nucleotidyltransferase OS=Bacillus anthracis
GN=pnp PE=3 SV=1
Length = 712
Score = 37.7 bits (86), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 1007 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 1066
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 1067 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 1126
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 1127 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 1165
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|C3P5L0|PNP_BACAA Polyribonucleotide nucleotidyltransferase OS=Bacillus anthracis
(strain A0248) GN=pnp PE=3 SV=1
Length = 712
Score = 37.7 bits (86), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 1007 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 1066
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 1067 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 1126
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 1127 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 1165
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|Q732R5|PNP_BACC1 Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus (strain
ATCC 10987) GN=pnp PE=3 SV=1
Length = 712
Score = 37.4 bits (85), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 1007 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 1066
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 1067 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 1126
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQSVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 1127 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 1165
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|A9VT44|PNP_BACWK Polyribonucleotide nucleotidyltransferase OS=Bacillus
weihenstephanensis (strain KBAB4) GN=pnp PE=3 SV=1
Length = 717
Score = 37.0 bits (84), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 1007 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 1066
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDMHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 1067 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 1126
A K+ + D+ + + + D A++V H RED I+ VK +E + +
Sbjct: 230 KTAVKL-YEVDADLNQAVREMAET-DMHSAIQVHEKHAREDAISVVKKRVIEHYEAEEAD 287
Query: 1127 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 1165
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVSEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|B7IUG5|PNP_BACC2 Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus (strain
G9842) GN=pnp PE=3 SV=1
Length = 712
Score = 37.0 bits (84), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 1007 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 1066
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 1067 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 1126
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAEEAD 287
Query: 1127 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 1165
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|B7HDT0|PNP_BACC4 Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus (strain
B4264) GN=pnp PE=3 SV=1
Length = 712
Score = 37.0 bits (84), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 73/165 (44%), Gaps = 15/165 (9%)
Query: 1007 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 1066
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 1067 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVK------HASLECA 1120
K+ + D+ + + + D A++V H RED I +VK + + E
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-EDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEVD 287
Query: 1121 SSLIGEYKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 1165
+ ++G+ E L K+ K RRL+ V K++ + R +++
Sbjct: 288 ADILGQVNEILYKIVKEEV-------RRLITVEKIRPDGRKGDEI 325
>sp|Q819Z1|PNP_BACCR Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus (strain
ATCC 14579 / DSM 31) GN=pnp PE=3 SV=1
Length = 712
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 1007 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 1066
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 1067 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 1126
K+ + D+ + + + D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-EDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 1127 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 1165
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 A-DTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|O50628|GYRA_BACHD DNA gyrase subunit A OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=gyrA PE=3
SV=1
Length = 833
Score = 36.6 bits (83), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Query: 31 EQNRLFFASSANNIYSAQLSSFQNERASIKTAISAEIEHIDLEPGDSITAFDYLMEKEAL 90
E + LFF + QLSSF N R A I+L GD + + +
Sbjct: 607 EDHYLFFMTKDGIAKRTQLSSFANIRRGGLFA-------INLREGDELHGVRLTNGDKEV 659
Query: 91 IVGTSSGLLL-LHSVDGNATEVVGRVEGGVRFISPSPDGDLLGV 133
IVGT G+ + H D ++GR GV+ IS + D ++G+
Sbjct: 660 IVGTRQGMAIRFHETD---VRLMGRTATGVKGISLTGDDHVVGM 700
>sp|O74309|SLM9_SCHPO Histone transcription regulator slm9 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=slm9 PE=1 SV=1
Length = 807
Score = 35.8 bits (81), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 96/247 (38%), Gaps = 39/247 (15%)
Query: 24 QFSALDIEQNRLFFASSA-NNIYSAQLSSF---QNERASIKTAISAEIEHIDLEPGDSIT 79
QFS+ I ++ F A SA N+Y F +E+ I++ + H+ + S
Sbjct: 13 QFSS--ISSSKDFVAVSAETNVYILSKDFFYPKSSEKRIIQSLNGHKTTHLSFDSPISCI 70
Query: 80 AFDYLMEKEALIVGTSSGLLLLHSVDGNATEVVGRVEGGVRFISPSPDGDLLGVTTGFGQ 139
F Y + L V T +G L HS + V + G + S G +L T + Q
Sbjct: 71 RFTY--DGSCLAVATEAGTFLYHSEKWDKAFQV--LSGPAYEVCWSQQGHILA--TSWKQ 124
Query: 140 ILVMTHDWDLLYENPLEELAEGFDVHEPELS--------SSFSFKSPISWR--------- 182
I + D L E +++ H+P +S S S S IS++
Sbjct: 125 ISIYVKDEGLRTETIVKKTEHADSNHQPAVSIEESKEAVESTSQSSEISFKLIKVIEGHH 184
Query: 183 --GDGKYFATLSEFCNSSKLHKRLKVWERDSGTLQASSELKAFMGAV-------LEWMPS 233
G F + +F S LKVW+ + ++ S K F L W P
Sbjct: 185 TFVGGLAFDPMGQFLASQSFDHTLKVWKLSTFGVEKSIA-KPFEQMPTGNRFLRLSWSPD 243
Query: 234 GANIAAV 240
GA+IA+V
Sbjct: 244 GAHIASV 250
>sp|Q27YG9|POLR_NORAV Replication polyprotein OS=Nora virus GN=ORF2 PE=4 SV=2
Length = 2104
Score = 35.0 bits (79), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 854 ERIKIIRETELLGSDEPRRMSYPSAEEALKHLLWLA-DSEAVYEAALGLYDLN-LAAIVA 911
ER+++I T + +P EE + + L +S+ Y + +G +N L ++
Sbjct: 920 ERVRVIAHTAQFPKKSYPQNGFPINEELHREWIQLVINSDYKYHSLIGEEKVNILWNLIR 979
Query: 912 LNSQRDPKEFLPYLQELESMPP 933
L QR+ + F YL++L++ PP
Sbjct: 980 LQPQREVENFKVYLEDLQASPP 1001
>sp|D4DG66|LIS1_TRIVH Nuclear distribution protein PAC1 OS=Trichophyton verrucosum
(strain HKI 0517) GN=PAC1 PE=3 SV=1
Length = 461
Score = 34.3 bits (77), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 119 VRFISPSPDGDLLGVTTGFGQILVMTHDWDLLYENPLEELAEGFDVHEPEL-----SSSF 173
VR + PSPDG L ++TG + WD+ NP ++ H E S+S+
Sbjct: 256 VRDVFPSPDGRFL-LSTGDDSTARL---WDISVSNPETKVTMFGHDHFNECCAIAPSTSY 311
Query: 174 SFKSPISWRGDGKYFATLSEFCNSSKLHKRLKVWERDSGTLQASSELKAFMGAVLEWMPS 233
+ SP++ ++ +EF + K++K+W+ L + ++ A L + P
Sbjct: 312 QYLSPLTGLKKPPPASSTAEFMATGSRDKKIKIWDARGTCLLTLAGHDNWIRA-LAFHPG 370
Query: 234 GANIAAVYDRKS--------ENKCPSIVFYERNGLER 262
G + +V D ++ E KC ++ R+ ER
Sbjct: 371 GKYLFSVSDDRTLRCWDLSQEGKCIKVM---RDAHER 404
>sp|D4AZ50|LIS1_ARTBC Nuclear distribution protein PAC1 OS=Arthroderma benhamiae (strain
ATCC MYA-4681 / CBS 112371) GN=PAC1 PE=3 SV=1
Length = 461
Score = 34.3 bits (77), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 119 VRFISPSPDGDLLGVTTGFGQILVMTHDWDLLYENPLEELAEGFDVHEPEL-----SSSF 173
VR + PSPDG L ++TG + WD+ NP ++ H E S+S+
Sbjct: 256 VRDVFPSPDGRFL-LSTGDDSTARL---WDISVSNPETKVTMFGHDHFNECCAIAPSTSY 311
Query: 174 SFKSPISWRGDGKYFATLSEFCNSSKLHKRLKVWERDSGTLQASSELKAFMGAVLEWMPS 233
+ SP++ ++ +EF + K++K+W+ L + ++ A L + P
Sbjct: 312 QYLSPLTGLKKPPPASSTAEFMATGSRDKKIKIWDARGTCLLTLAGHDNWIRA-LAFHPG 370
Query: 234 GANIAAVYDRKS--------ENKCPSIVFYERNGLER 262
G + +V D ++ E KC ++ R+ ER
Sbjct: 371 GKYLFSVSDDRTLRCWDLSQEGKCIKVM---RDAHER 404
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 472,580,828
Number of Sequences: 539616
Number of extensions: 19818179
Number of successful extensions: 52627
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 52509
Number of HSP's gapped (non-prelim): 83
length of query: 1323
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1193
effective length of database: 121,419,379
effective search space: 144853319147
effective search space used: 144853319147
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)