BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000740
(1321 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4IHD2|ARIP4_XENTR Helicase ARIP4 OS=Xenopus tropicalis GN=rad54l2 PE=2 SV=1
Length = 1396
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 293/838 (34%), Positives = 442/838 (52%), Gaps = 140/838 (16%)
Query: 509 VQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITG------YIVNVVREKGEEAVRIPSSI 562
+Q S + N V DGD++ S + DA+ +VN+ E+ + + +
Sbjct: 208 LQISDNADSTNEV--DGDITTENSGSHVNDALNQADHLGRVLVNINHPPNEKDIFLAPQL 265
Query: 563 SAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSV 622
+ +K+HQ+ GIRF+++N+++S+ + SG G GCILAH+MGLGKT QVI+FL +
Sbjct: 266 ARAVKSHQIGGIRFLYDNLVESLERF-SGSSGFGCILAHSMGLGKTLQVISFLDVLFQHT 324
Query: 623 NLGLRTALIVTPVNVLHNWKQEFMKWRPS----------ELKPLRVFMLEDVSRDR---- 668
+ +T L + PVN L NW EF W P EL R F + ++ +
Sbjct: 325 SA--KTVLAIVPVNTLQNWLAEFNMWLPPPESLPKDHNQELVQPRAFKVHTMNDEHKTTA 382
Query: 669 -RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV-----------------------KDRNM 704
RA+++ W GGV L+GY +R LS K + + M
Sbjct: 383 ARAKVVNDWATDGGVLLMGYEMYRLLSLKKSFTAGRKKKSKKAAGPVIIDLDEEDRQQEM 442
Query: 705 AREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYC 763
+ I AL + GPD+++CDE H IKN A T+QALK ++ +RR+ LTG PLQNNL+EY+C
Sbjct: 443 LKGIEKALSRPGPDVVICDEGHRIKNCHASTSQALKNIRSRRRVVLTGYPLQNNLIEYWC 502
Query: 764 MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM 823
MVDFVR FLG+ EF N F+ PI NGQ +ST +D ++M RSH+L+ L+GFVQR
Sbjct: 503 MVDFVRPDFLGTRQEFSNMFERPILNGQCVDSTPQDKRLMRYRSHVLHSLLEGFVQRRGH 562
Query: 824 NVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQAL--- 880
V+K LP K VI V+LS +QR LY F++ + R + +G+ L
Sbjct: 563 TVLKAQLPFKEEHVILVRLSKIQRDLYTEFMN------------RFRDAGNSGWLGLNPL 610
Query: 881 ------AQIWNHPGILQLTKDKGYPSRE---DAEDSSSD------------ENMDYNVVI 919
+IWNHP +L K + E D ED ++ E ++
Sbjct: 611 KAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEDLGTNNRCNAQSGKIKVEPNSLGALM 670
Query: 920 GEKPRNMNDFLQG-------KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC 972
GE LQG + + +W ++L ++ +L S KMVLL ++
Sbjct: 671 GETAHTKQ--LQGIVLNPSHEKANQVVTYEWAKEILSDYIPGQLQNSPKMVLLFHLIEES 728
Query: 973 SNMGDKSLVFSQSIPTLDLIEFYLS--KLPRP----GKQGKLWKKGKDWYRLDGRTESSE 1026
MGDK LVFSQS+ TL ++E +L+ K+P P G++G W + ++YRLDG T +SE
Sbjct: 729 MRMGDKILVFSQSLSTLSIMEEFLAKRKMPIPAGSDGQEGHTWIRNVNYYRLDGSTSASE 788
Query: 1027 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1086
R++L+ +FN+P N++V L+STRAG LG+NL ANRV++ D SWNP +D QA+ R +RY
Sbjct: 789 RERLINQFNDPSNEKVWLFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRY 848
Query: 1087 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDE 1146
GQ KP + YRL++ T+E+KIY RQ+TK+G++ RVVD ++ E+ +L F ++E
Sbjct: 849 GQRKPCYIYRLVSDFTLEKKIYDRQITKQGMSDRVVDDLNPEVNFTRREVENLLHFVEEE 908
Query: 1147 NPDPLTAVSKENGQGSSQNTNCALKHKLPLSHEGCSDKLMESLLGK---HHPRWISN-YH 1202
PD S Q+ + + H E++L K +P I+
Sbjct: 909 -PD-----------ASRQHLDSSSFH--------------EAVLQKACLQYPHLITKEPF 942
Query: 1203 EHETLLQENEEERLSKEEQDMAWEVFRKSLEWEEVQRVTVD---ESISERKPASMSNL 1257
+HE+LL + +E++L+ E+ A +EE +R +V S ++ PA NL
Sbjct: 943 QHESLLLDRKEQKLTLAEKKAA------KRGYEEEKRASVPYTRPSYTQYYPAPDHNL 994
>sp|Q9Y4B4|ARIP4_HUMAN Helicase ARIP4 OS=Homo sapiens GN=RAD54L2 PE=1 SV=4
Length = 1467
Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust.
Identities = 271/716 (37%), Positives = 397/716 (55%), Gaps = 83/716 (11%)
Query: 538 DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 597
DA+ +VN+ EE V + ++ +K HQ+ GIRF+++N+++S+ + K+ G GC
Sbjct: 243 DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301
Query: 598 ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 648
ILAH+MGLGKT QVI+F+ R + +T L + PVN L NW EF W
Sbjct: 302 ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 359
Query: 649 --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 699
+P E++P +V +L D + RA+++A W ++GGV L+GY +R L+ K
Sbjct: 360 DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419
Query: 700 --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 738
+ + RE AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420 RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479
Query: 739 KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 798
K ++ +RR+ LTG PLQNNL+EY+CMVDFVR FLG+ EF N F+ PI NGQ +ST +
Sbjct: 480 KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539
Query: 799 DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 858
DV++M RSH+L+ L+GFVQR V+K LP K VI V+LS +QR LY +F+D
Sbjct: 540 DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598
Query: 859 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 909
D S+ + + + +IWNHP +L K + E D E+ S
Sbjct: 599 --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 656
Query: 910 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 953
E+ +GE + FLQG + F ++ +W DLL +
Sbjct: 657 CPPQGTKGKGEDSTLASSMGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 714
Query: 954 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LPRP----GKQGK 1007
L+ S KMVLL ++ +GDK LVFSQS+ TL LIE +L K +P P G+ +
Sbjct: 715 GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQ 774
Query: 1008 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1067
W + ++RLDG T + ER++L+ +FN+P N L+STRAG LG+NL ANRV++
Sbjct: 775 KWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 834
Query: 1068 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1127
D SWNP +D QA+ R +RYGQ KP + YRL+A T+E+KIY RQ++K+G++ RVVD
Sbjct: 835 DASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNP 894
Query: 1128 HRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1179
+++E+ +L F + E P P +++ + + S C L K P HE
Sbjct: 895 MLNFTRKEVENLLHFVEKE-PAPQVSLNVKGIKESVLQLACLKYPHLITKEPFEHE 949
>sp|Q99NG0|ARIP4_MOUSE Helicase ARIP4 OS=Mus musculus GN=Rad54l2 PE=1 SV=1
Length = 1466
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 273/723 (37%), Positives = 398/723 (55%), Gaps = 97/723 (13%)
Query: 538 DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 597
DA+ +VN+ EE V + ++ +K HQ+ GIRF+++N+++S+ + K+ G GC
Sbjct: 242 DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 300
Query: 598 ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 648
ILAH+MGLGKT QVI+F+ R + +T L + PVN L NW EF W
Sbjct: 301 ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 358
Query: 649 --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 699
+P E++P +V +L D + RA++ A W ++GGV L+GY +R L+ K +
Sbjct: 359 DSKPEEVQPRFFKVHILNDEHKTVASRAKVTADWVSEGGVLLMGYEMYRLLTLKKSLATS 418
Query: 700 --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 738
+ + RE AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 419 RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 478
Query: 739 KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 798
K ++ +RR+ LTG PLQNNL+EY+CMVDFVR FLG+ EF N F+ PI NGQ +ST +
Sbjct: 479 KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 538
Query: 799 DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 858
DV++M RSH+L+ L+GFVQR V+K LP K VI V+LS +QR LY +F+D
Sbjct: 539 DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSQIQRDLYTQFMD--- 595
Query: 859 FTNDRVSNEKIRKSFFAGYQAL---------AQIWNHPGIL-------QLTKDKGYPSRE 902
+ R +G+ L +IWNHP +L L ++ E
Sbjct: 596 ---------RFRDCGTSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEE 646
Query: 903 DAEDSSSDENMDYNV-VIGEK---PRNMND-----FLQGKNDDGFFQK-------DWWND 946
+S + V GE P +M + FLQG + F ++ +W +
Sbjct: 647 LGSAGTSARCPPHGTKVKGEDSALPSSMGEATNSKFLQGVGFNPFQERGNNIVTYEWAKE 706
Query: 947 LLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPG 1003
LL + L+ S KMVLL ++ +GDK LVFSQS+ TL LIE +L K +P PG
Sbjct: 707 LLTNYQTGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDMPCLPG 766
Query: 1004 KQG---KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHS 1060
+G + W + ++RLDG T + ER++L+ +FN+P N L+STRAG LG+NL
Sbjct: 767 AEGQGTQKWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIG 826
Query: 1061 ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR 1120
ANRV++ D SWNP +D QA+ R +RYGQ KP YRL+A T+E+KIY RQ++K+G++ R
Sbjct: 827 ANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDR 886
Query: 1121 VVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPL 1176
VVD +++E+ +L F + E P P T++ + + S C L K P
Sbjct: 887 VVDDLNPMLNFTRKEVENLLHFVEKE-PAPQTSLDIKGIKESVLQLACLKYPHLITKEPF 945
Query: 1177 SHE 1179
HE
Sbjct: 946 EHE 948
>sp|Q9GQN5|ATRX_DROME Transcriptional regulator ATRX homolog OS=Drosophila melanogaster
GN=XNP PE=1 SV=2
Length = 1311
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 283/844 (33%), Positives = 456/844 (54%), Gaps = 120/844 (14%)
Query: 470 KRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSA 529
++ ++K IR+I+ +L TK E +R++R++ Q KL N + + +
Sbjct: 376 QKNKRKHIRKIIKTKDLDLTTKEAAKEEDDRRKRIEDRQ-------KLYNRIFVKSE--- 425
Query: 530 GASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVK 589
S+E I +++ E + +++ + KLK HQV G++FMW+ +++++ +
Sbjct: 426 --SVE-----INELVLDFDEESKKALLQVDKGLLKKLKPHQVAGVKFMWDACFETLKESQ 478
Query: 590 SGDKGLGCILAHTMGLGKTFQVIAFLYTAM-RSVNLGLRTALIVTPVNVLHNWKQEFMKW 648
G GCILAH MGLGKT QV+ +T + + G+ LI++P++ ++NW +EF W
Sbjct: 479 E-KPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTGVDRVLIISPLSTVNNWAREFTSW 537
Query: 649 -RPSELKPLRVFMLEDVSRDR----RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN 703
+ + + V+ D+SR + R L +W +GGV ++GY +R L+ K R
Sbjct: 538 MKFANRNDIEVY---DISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRK 594
Query: 704 MARE-ICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEY 761
RE + AL D GPD++VCDE H++KN + ++A+ +++ +RRI LTG+PLQNNL EY
Sbjct: 595 KQREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREY 654
Query: 762 YCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRM 821
YCM+ FV+ LG+ E+ NRF NPI NGQ+T+ST D+++M RSHIL++ L+G +QR
Sbjct: 655 YCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRR 714
Query: 822 DMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS--FFAGYQA 879
D +V+ LPPK +V+ LS LQ++LY ++ H ++ + + K F +Q
Sbjct: 715 DYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTH---REQSGGDVVGKGARLFQDFQD 771
Query: 880 LAQIWNHPGILQLTKD---------------KGYPSREDAEDSSSDENMDY--------- 915
L +IW HP L++ D +G+ E ED ++ + D
Sbjct: 772 LRRIWTHPMNLRVNSDNVIAKRLLSNDDSDMEGFICDETDEDEAASNSSDSCETFKSDAS 831
Query: 916 --------NVVIGEKPRNMN----------DFLQGKNDDGFFQKD----WWNDLLHEHTY 953
V K RN N + L G QKD WW + E
Sbjct: 832 MSGLAASSGKVKKRKTRNGNAGGGDSDSDLEMLGGLGGGSSVQKDDPSEWWKPFVEEREL 891
Query: 954 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL----- 1008
+ +S K+++LL +L C +GDK LVFSQS+ +LD+IE +LS + K +
Sbjct: 892 NNVHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVG 951
Query: 1009 -----WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1063
W GKD++RLDG +R+ + ++FN N R + LISTRAG LGINL +ANR
Sbjct: 952 DFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANR 1011
Query: 1064 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1123
V+I D SWNP++D Q+I+R +R+GQ KP + YRL+A GTME+K+Y+RQV K+ A RV+D
Sbjct: 1012 VVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVID 1071
Query: 1124 RQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALKHKLPLSHEGCSD 1183
QQ+ R ++ +++ L+ + + + ++P+ + D
Sbjct: 1072 EQQISRHYNQTDLMELYSY----------------------ELKPSTEREMPILPK---D 1106
Query: 1184 KLMESLLGKHHPRWISNYHEHETLLQENEEERLSKEEQDMAWEVFRKSLEWEEVQRVTVD 1243
+L +L +H + I YHEH++LL++ E E L++EE+ AW + E E+ + V
Sbjct: 1107 RLFAEILTEHE-KLIFKYHEHDSLLEQEEHENLTEEERKSAWAEY----EAEKTRTVQAS 1161
Query: 1244 ESIS 1247
+ +S
Sbjct: 1162 QYMS 1165
>sp|Q7YQM4|ATRX_PANTR Transcriptional regulator ATRX OS=Pan troglodytes GN=ATRX PE=2 SV=1
Length = 2492
Score = 320 bits (821), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)
Query: 541 TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 600
T +++ E E V++ ++ KLK HQV G++FMW+ +S++K K G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593
Query: 601 HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 658
H MGLGKT QV++FL+T + L TAL+V P+N NW EF KW+ + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653
Query: 659 FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 716
L V R + R+ +L +W+ GGV +IGY +RNL+ G++VK R + AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713
Query: 717 DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 776
D +VCDE H++KN + ++A+ ++ +RRI LTG+PLQNNL+EY+CMV+F++E LGS
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773
Query: 777 HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 836
EFRNRF NPI+NGQ +ST DV++M +R+HILYE L G VQR D + K LPPK +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833
Query: 837 VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 892
V+ V+++ +Q +LY+ +LD L G N+ K F +Q L++IW HP LQL
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893
Query: 893 --TKDKGY 898
++KGY
Sbjct: 1894 ISKENKGY 1901
Score = 234 bits (597), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 180/297 (60%), Gaps = 28/297 (9%)
Query: 942 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1001
DW+ D + + + L++SGKMVLL +IL M +GDK LVFSQS+ +LDLIE +L R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059
Query: 1002 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1051
+ K W + D+YRLDG T + R+K E FN+ N R + +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119
Query: 1052 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1111
GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2179
Query: 1112 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALK 1171
VTK+ L+ RVVD+QQV R + E+ L+ F D DP N+ K
Sbjct: 2180 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP--------------NSEKKKK 2225
Query: 1172 HKLPLSHEGCSDKLMESLLGKHHPRWISNYHEHETLLQENEEERLSKEEQDMAWEVF 1228
P+ + D ++ LL + H I YHEH++LL EEE L++EE+ AW +
Sbjct: 2226 RDTPMLPK---DTILAELL-QIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEY 2278
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 335 CTACNNVA-----IEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 389
CTAC ++ HP L V++CK+C +D+D + C WC +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230
Query: 390 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 436
C C FC C+ RN+ LS + + + W C C P L L +
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 278
>sp|P46100|ATRX_HUMAN Transcriptional regulator ATRX OS=Homo sapiens GN=ATRX PE=1 SV=5
Length = 2492
Score = 320 bits (821), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)
Query: 541 TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 600
T +++ E E V++ ++ KLK HQV G++FMW+ +S++K K G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593
Query: 601 HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 658
H MGLGKT QV++FL+T + L TAL+V P+N NW EF KW+ + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653
Query: 659 FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 716
L V R + R+ +L +W+ GGV +IGY +RNL+ G++VK R + AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713
Query: 717 DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 776
D +VCDE H++KN + ++A+ ++ +RRI LTG+PLQNNL+EY+CMV+F++E LGS
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773
Query: 777 HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 836
EFRNRF NPI+NGQ +ST DV++M +R+HILYE L G VQR D + K LPPK +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833
Query: 837 VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 892
V+ V+++ +Q +LY+ +LD L G N+ K F +Q L++IW HP LQL
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893
Query: 893 --TKDKGY 898
++KGY
Sbjct: 1894 ISKENKGY 1901
Score = 234 bits (597), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 180/297 (60%), Gaps = 28/297 (9%)
Query: 942 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1001
DW+ D + + + L++SGKMVLL +IL M +GDK LVFSQS+ +LDLIE +L R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059
Query: 1002 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1051
+ K W + D+YRLDG T + R+K E FN+ N R + +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119
Query: 1052 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1111
GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2179
Query: 1112 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALK 1171
VTK+ L+ RVVD+QQV R + E+ L+ F D DP N+ K
Sbjct: 2180 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP--------------NSEKKKK 2225
Query: 1172 HKLPLSHEGCSDKLMESLLGKHHPRWISNYHEHETLLQENEEERLSKEEQDMAWEVF 1228
P+ + D ++ LL + H I YHEH++LL EEE L++EE+ AW +
Sbjct: 2226 RDTPMLPK---DTILAELL-QIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEY 2278
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 335 CTACNNVA-----IEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 389
CTAC ++ HP L V++CK+C +D+D + C WC +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230
Query: 390 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 436
C C FC C+ RN+ LS + + + W C C P L L +
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 278
>sp|Q7YQM3|ATRX_PONPY Transcriptional regulator ATRX OS=Pongo pygmaeus GN=ATRX PE=2 SV=1
Length = 2492
Score = 320 bits (820), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)
Query: 541 TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 600
T +++ E E V++ ++ KLK HQV G++FMW+ +S++K K G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593
Query: 601 HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 658
H MGLGKT QV++FL+T + L TAL+V P+N NW EF KW+ + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653
Query: 659 FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 716
L V R + R+ +L +W+ GGV +IGY +RNL+ G++VK R + AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713
Query: 717 DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 776
D +VCDE H++KN + ++A+ ++ +RRI LTG+PLQNNL+EY+CMV+F++E LGS
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773
Query: 777 HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 836
EFRNRF NPI+NGQ +ST DV++M +R+HILYE L G VQR D + K LPPK +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833
Query: 837 VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 892
V+ V+++ +Q +LY+ +LD L G N+ K F +Q L++IW HP LQL
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893
Query: 893 --TKDKGY 898
++KGY
Sbjct: 1894 ISKENKGY 1901
Score = 234 bits (596), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 180/297 (60%), Gaps = 28/297 (9%)
Query: 942 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1001
DW+ D + + + L++SGKMVLL +IL M +GDK LVFSQS+ +LDLIE +L R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059
Query: 1002 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1051
+ K W + D+YRLDG T + R+K E FN+ N R + +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119
Query: 1052 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1111
GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2179
Query: 1112 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALK 1171
VTK+ L+ RVVD+QQV R + E+ L+ F D DP N+ K
Sbjct: 2180 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP--------------NSEKKKK 2225
Query: 1172 HKLPLSHEGCSDKLMESLLGKHHPRWISNYHEHETLLQENEEERLSKEEQDMAWEVF 1228
P+ + D ++ LL + H I YHEH++LL EEE L++EE+ AW +
Sbjct: 2226 RDTPMLPK---DTILAELL-QIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEY 2278
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 335 CTACNNVA-----IEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 389
CTAC ++ HP L V++CK+C +D+D + C WC +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230
Query: 390 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 436
C C FC C+ RN+ LS + + + W C C P L L +
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 278
>sp|Q61687|ATRX_MOUSE Transcriptional regulator ATRX OS=Mus musculus GN=Atrx PE=1 SV=3
Length = 2476
Score = 320 bits (819), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 233/368 (63%), Gaps = 11/368 (2%)
Query: 541 TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 600
T +++ E E V++ ++ KLK HQV G++FMW+ +S+ K K G GCILA
Sbjct: 1520 TKLVLDENEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVEKTKKS-PGSGCILA 1578
Query: 601 HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP--SELKPLRV 658
H MGLGKT QV++FL+T + L TAL+V P+N NW EF KW+ ++ + L V
Sbjct: 1579 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLNDNEKLEV 1638
Query: 659 FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 716
L V R + R+ +L +W+ GGV +IGY +RNL+ G++VK R + AL D GP
Sbjct: 1639 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKDIFNKALVDPGP 1698
Query: 717 DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 776
D +VCDE H++KN + ++A+ +K +RRI LTG+PLQNNL+EY+CMV+F++E LGS
Sbjct: 1699 DFVVCDEGHILKNEASAVSKAMNSIKSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1758
Query: 777 HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 836
EFRNRF NPI+NGQ +ST DV++M +R+HILYE L G VQR D + K LPPK +
Sbjct: 1759 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1818
Query: 837 VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 892
V+ V+++ +Q +LY+ +LD L G N K F +Q L++IW HP LQL
Sbjct: 1819 VLAVRMTAIQCKLYQYYLDHLTGVGNSTEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1878
Query: 893 --TKDKGY 898
++KGY
Sbjct: 1879 ISKENKGY 1886
Score = 234 bits (596), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 180/297 (60%), Gaps = 28/297 (9%)
Query: 942 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1001
DW+ D + + + L++SGKMVLL +IL M +GDK LVFSQS+ +LDLIE +L R
Sbjct: 1983 DWYKDFVTDTDAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2042
Query: 1002 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1051
+ K W + D+YRLDG T + R+K E FN+ N R + +IST+A
Sbjct: 2043 EKTEDKEKPLIYKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIISTKA 2102
Query: 1052 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1111
GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2103 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2162
Query: 1112 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALK 1171
VTK+ L+ RVVD+QQV R + E+ L+ F D DP N+ K
Sbjct: 2163 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP--------------NSEKKKK 2208
Query: 1172 HKLPLSHEGCSDKLMESLLGKHHPRWISNYHEHETLLQENEEERLSKEEQDMAWEVF 1228
P+ + D ++ LL + H I YHEH++LL EEE L++EE+ AW +
Sbjct: 2209 RDTPMLPK---DTILAELL-QIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEY 2261
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 335 CTACNNVA-----IEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 389
CTAC ++ HP L V++CK+C +D+D + C WC +L+
Sbjct: 170 CTACGQQVNHFQKDSIYRHPSLKVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 229
Query: 390 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 436
C C FC C+ RN+ LS + + + W C C P L L +
Sbjct: 230 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICQPEPLLDLVT 277
>sp|Q9DG67|RA54B_CHICK DNA repair and recombination protein RAD54B OS=Gallus gallus
GN=RAD54B PE=2 SV=1
Length = 918
Score = 266 bits (679), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 194/594 (32%), Positives = 300/594 (50%), Gaps = 77/594 (12%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 621
I+ L+ HQ GI F++E ++ +R SG G ILA MGLGKT Q I+ ++T +R
Sbjct: 299 IANNLRPHQREGIVFLYECVM-GMRV--SGR--FGAILADEMGLGKTLQCISLVWTLLRQ 353
Query: 622 VNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWR 677
G L+ ALIVTP +++ NWK+EF KW SE ++VF V +D + E
Sbjct: 354 GVYGCKPVLKRALIVTPGSLVKNWKKEFQKWLGSER--IKVFT---VDQDHKVEEFIS-S 407
Query: 678 AKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 736
V +I Y R+L D+ A E ++L+CDE H +KN+ TT
Sbjct: 408 PLYSVMIISYEMLLRSL-------DQIQAIEF--------NLLICDEGHRLKNSSIKTTT 452
Query: 737 ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 796
AL + C+RRI LTG+P+QN+L E+Y +++FV G LGS +R ++ PI + ++T
Sbjct: 453 ALTNLSCERRIILTGTPIQNDLQEFYALIEFVNPGVLGSLSTYRKIYEEPIVRSREPSAT 512
Query: 797 SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD- 855
E+ + +R+ L F+ R V+ K LPPK +I + + LQ LY++ L
Sbjct: 513 KEEKDLGEKRAAELTRLTGLFILRRTQEVINKFLPPKKENIIFCQPTALQLELYRKLLSS 572
Query: 856 --LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 913
+ R+ N AL ++ NHP +L +E D SDE++
Sbjct: 573 RVISSCLQGRLENS----PHLICIGALKKLCNHPCLL------FKALKEKCCDPKSDEHV 622
Query: 914 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCS 973
+ + +G D F +D+ +D T+ E+D SGK+ +L+ +L
Sbjct: 623 E------------SSLYEGLTD--VFPQDYTSD-----TFSEID-SGKLQVLVKLLAAIR 662
Query: 974 NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVER 1033
+ V L+ Y L + K + G + RLDG T S+RQ++V+
Sbjct: 663 ELSSSERVV--------LVSNYTQTLNVLLETCKCY--GYSYTRLDGNTPVSQRQQIVDS 712
Query: 1034 FNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVF 1093
FN + L+S++AG +G+NL A+ +I+ D WNP D+QA+ R WR GQ V
Sbjct: 713 FNSKFSPAF-IFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKCTVH 771
Query: 1094 AYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHLFEFGDD 1145
YRL+ GT+EEKIY+RQ++K+ L+ VVD + H S EE+ +LF ++
Sbjct: 772 IYRLLTTGTIEEKIYQRQISKQDLSGAVVDLSKTSEHIHFSVEELRNLFTLHEN 825
>sp|B4MX21|RAD54_DROWI DNA repair and recombination protein RAD54-like OS=Drosophila
willistoni GN=okr PE=3 SV=1
Length = 784
Score = 265 bits (678), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 188/606 (31%), Positives = 303/606 (50%), Gaps = 111/606 (18%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 619
+S L+ HQ G+RFM++ + G KG GCI+A MGLGKT Q + ++T +
Sbjct: 149 LSNILRPHQREGVRFMYDCV--------EGKKGNFNGCIMADEMGLGKTLQCVTLVWTLL 200
Query: 620 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 676
R + A+IV+P +++ NW++EF KW + L +E S++ + L ++
Sbjct: 201 RQSCECKPTITKAIIVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKEDTIKALEQF 257
Query: 677 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 730
R V LI Y FR A +C Q+ +++CDE H +KN+
Sbjct: 258 SMNTSTRLGTPVLLISYETFRI-----------YANILC---QNEVGMVICDEGHRLKNS 303
Query: 731 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 790
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+NPI G
Sbjct: 304 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENPILKG 363
Query: 791 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 850
Q+T+S+ ++ + +++ L + + R ++ K LP K VI V+L+ +Q Y
Sbjct: 364 QNTDSSDKERERALEKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVICVRLTSVQLEFY 423
Query: 851 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGIL---QLTKDKGYPSR 901
FL +D+V NEK + A L ++ +HP ++ L +DKG+
Sbjct: 424 TNFLK-----SDKVRRSLADCNEKASLTALADITTLKKLCSHPDLIYEKMLARDKGF--- 475
Query: 902 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 961
EN + KP+++N L GK
Sbjct: 476 ---------ENSQNILPTNYKPKDLNPELSGK---------------------------- 498
Query: 962 MVLLLDIL--TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1019
+LLD + T+ +N DK ++ S TLDL E +L R K+ + RLD
Sbjct: 499 -FMLLDFMLATIRANSDDKVVLISNYTQTLDLFE----QLAR--------KRKYTFVRLD 545
Query: 1020 GRTESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1077
G +R K+V+RFN+P N C L +S++AG G+NL ANR+ + D WNP D
Sbjct: 546 GTMTIKKRSKVVDRFNDPEN---DCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDE 602
Query: 1078 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEM 1136
QA+ R WR GQ KP + YRL+A G++EEKI +RQ K+ L++ ++D + + +++++
Sbjct: 603 QAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDL 662
Query: 1137 LHLFEF 1142
LF F
Sbjct: 663 KDLFSF 668
>sp|Q03468|ERCC6_HUMAN DNA excision repair protein ERCC-6 OS=Homo sapiens GN=ERCC6 PE=1 SV=1
Length = 1493
Score = 263 bits (671), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 194/636 (30%), Positives = 298/636 (46%), Gaps = 103/636 (16%)
Query: 553 EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 612
+E ++P + KL +Q G+R++WE Q G IL MGLGKT Q+I
Sbjct: 494 DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 543
Query: 613 AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 663
AFL Y+ +R+ GL +IV P V+H W +EF W P P RV +L +
Sbjct: 544 AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 599
Query: 664 V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 721
S + E L + A G+ + Y+ R + +++R H ++
Sbjct: 600 TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 645
Query: 722 DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 781
DE H I+N A T A KQ + RI L+GSP+QNNL E + + DF+ G LG+ F
Sbjct: 646 DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 705
Query: 782 RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 839
+F PI G ++N++ VK + + +L + + + ++RM +V + LP K V+
Sbjct: 706 QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 765
Query: 840 VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 899
+L+ Q ++Y+ F+D R+ N +++ F+G AL +I NHP +
Sbjct: 766 CRLTDEQHKVYQNFVDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--------- 812
Query: 900 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 959
P+N L+G DD L E + S
Sbjct: 813 --------------------SGGPKN----LKGLPDDE----------LEEDQFGYWKRS 838
Query: 960 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1019
GKM+++ +L + G + L+FSQS LD++E +L + + ++D
Sbjct: 839 GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYTYLKMD 886
Query: 1020 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1079
G T + RQ L+ R+NE + + L++TR G LG+NL ANRV+I D WNP+ D QA
Sbjct: 887 GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 944
Query: 1080 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1139
RAWR GQ K V YRL+ GT+EEKIY RQ+ K+ L RV+ + R ++ L
Sbjct: 945 RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1004
Query: 1140 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1174
F + + G GS Q C LK ++
Sbjct: 1005 FTLTSPDASQSTETSAIFAGTGSDVQTPKCHLKRRI 1040
>sp|A4PBL4|RAD54_ORYSJ DNA repair and recombination protein RAD54 OS=Oryza sativa subsp.
japonica GN=RAD54 PE=1 SV=1
Length = 980
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 184/604 (30%), Positives = 306/604 (50%), Gaps = 80/604 (13%)
Query: 555 AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 614
A+++ + L+ HQ G++FM++ + + + D GCILA MGLGKT Q I
Sbjct: 224 AIKVDHLLVRYLRPHQREGVQFMFD----CVSGLLNDDGISGCILADDMGLGKTLQSITL 279
Query: 615 LYTAM---RSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 671
LYT + ++ A++VTP +++ NW+ E +KW ++ L + RA+
Sbjct: 280 LYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLKGRVQ------LLALCESTRAD 333
Query: 672 LLA------KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAH 725
+L+ K ++ V ++ Y FR + R D+L+CDEAH
Sbjct: 334 VLSGIESFLKPLSRLQVLIVSYETFR-------MHSSKFERP------GSCDLLICDEAH 380
Query: 726 MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 785
+KN + T +AL + C+RRI L+G+P+QN+L E++ MV+F G LG + FR ++
Sbjct: 381 RLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYEA 440
Query: 786 PIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPL 845
PI G+ +++E+ + ++RS L ++ F+ R ++ LPPK V V+ KL+ L
Sbjct: 441 PIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTAL 500
Query: 846 QRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWNHPGILQLTKDKGYPSREDA 904
Q LY F +H R+ +E ++S Y AL ++ NHP ++ D
Sbjct: 501 QTALYNHF--IHSKNVKRLISEGTKQSKVLAYITALKKLCNHPKLIY-----------DT 547
Query: 905 EDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVL 964
S++ ++ + P + G++ W +L SGKM +
Sbjct: 548 IKSNNSGGSGFDDCLRFFP---PELFSGRSGSWTGGGGMWVEL-----------SGKMHV 593
Query: 965 LLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1023
L +L + D+ ++ S TLDL ++L R ++ + RLDG T
Sbjct: 594 LARLLGHLRLKTDDRIVLVSNYTQTLDL----FAQLCR--------ERRYPYIRLDGATS 641
Query: 1024 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1083
++RQKLV +FN+P ++ L+S++AG G+NL NR+I+ D WNP D QA R
Sbjct: 642 INKRQKLVNQFNDP-SRDEFVFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDKQAAARV 700
Query: 1084 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH-----RTISKEEMLH 1138
WR GQ K V+ YR ++ GT+EEK+Y+RQ++KEGL +V+ ++Q ++S E++
Sbjct: 701 WRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQADGKMQGSSLSTEDLRD 759
Query: 1139 LFEF 1142
LF F
Sbjct: 760 LFTF 763
>sp|Q92698|RAD54_HUMAN DNA repair and recombination protein RAD54-like OS=Homo sapiens
GN=RAD54L PE=1 SV=2
Length = 747
Score = 261 bits (667), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 190/605 (31%), Positives = 297/605 (49%), Gaps = 88/605 (14%)
Query: 549 REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 608
+EK V + +S L+ HQ G++F+WE + R++ GCI+A MGLGKT
Sbjct: 136 KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190
Query: 609 FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 665
Q I ++T +R + A++V+P +++ NW E KW ++PL + + S
Sbjct: 191 LQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 247
Query: 666 RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 718
+D + L + R + +I Y FR L G LQ G +
Sbjct: 248 KDEIDQKLEGFMNQRGARVSSPILIISYETFR-LHVG--------------VLQKGSVGL 292
Query: 719 LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 778
++CDE H +KN+ T QAL + RR+ ++G+P+QN+L+EY+ +V FV G LG++HE
Sbjct: 293 VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352
Query: 779 FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 838
F+ F+ PI G+ ++ D ++ +R L + + R +++ K LP K V+
Sbjct: 353 FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412
Query: 839 TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 898
+L+PLQ LYKRFL + + K+ S + +L ++ NHP ++
Sbjct: 413 CCRLTPLQTELYKRFLR-QAKPAEELLEGKMSVSSLSSITSLKKLCNHPALI-------- 463
Query: 899 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 958
Y+ + E+ D G D F + + L E
Sbjct: 464 ----------------YDKCVEEE-----DGFVGALD--LFPPGYSSKAL------EPQL 494
Query: 959 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1016
SGKM++L IL + S DK ++ S TLDL E KL + + Y
Sbjct: 495 SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 541
Query: 1017 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1076
RLDG +R K+VERFN P + ++S++AG G+NL ANR+++ D WNP D
Sbjct: 542 RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600
Query: 1077 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1135
QA+ R WR GQ K + YRL++ GT+EEKI++RQ K+ L++ VVD +Q V R S E
Sbjct: 601 EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660
Query: 1136 MLHLF 1140
+ LF
Sbjct: 661 LKELF 665
>sp|B4KHL5|RAD54_DROMO DNA repair and recombination protein RAD54-like OS=Drosophila
mojavensis GN=okr PE=3 SV=1
Length = 783
Score = 259 bits (663), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 186/606 (30%), Positives = 297/606 (49%), Gaps = 111/606 (18%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 619
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q + +T +
Sbjct: 145 LSNVLRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLTWTLL 196
Query: 620 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 676
R + A+IV+P +++ NW++EF KW + L +E S++ L ++
Sbjct: 197 RQSPDCKPTISKAIIVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKEDTTRALEQF 253
Query: 677 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 730
R V LI Y FR H+ +C + +++CDE H +KN+
Sbjct: 254 AMNTATRCGTPVLLISYETFR---LYAHI--------LC---KTEVGMVICDEGHRLKNS 299
Query: 731 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 790
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+N I G
Sbjct: 300 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENSILRG 359
Query: 791 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 850
Q+ +ST + + Q++ L + + R ++ K LP K V+ VKL+P+Q ++Y
Sbjct: 360 QNADSTDAERQRALQKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVVCVKLTPVQLQIY 419
Query: 851 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSR 901
FL +D+V NEK + A L ++ NHP ++ K+KG+
Sbjct: 420 TNFLK-----SDQVRRSLADCNEKASLTALADITTLKKLCNHPDLIYEKIAAKEKGF--- 471
Query: 902 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 961
EN + KP+++N L GK
Sbjct: 472 ---------ENSQNVLPPNYKPKDVNPELSGK---------------------------- 494
Query: 962 MVLLLDILTMC--SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1019
+LLD + +N DK ++ S TLDL E +L R K+ + RLD
Sbjct: 495 -FMLLDFMLAAIRANSDDKVVLISNYTQTLDLFE----QLAR--------KRKYTYVRLD 541
Query: 1020 GRTESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1077
G +R K+V+RFN+P C L +S++AG G+NL ANR+ + D WNP D
Sbjct: 542 GTMTIKKRSKVVDRFNDP---STDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDE 598
Query: 1078 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEM 1136
QA+ R WR GQ KP + YRL+A G++EEKI +RQ K+ L++ ++D + + +++++
Sbjct: 599 QAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESSEKHFTRDDL 658
Query: 1137 LHLFEF 1142
LF F
Sbjct: 659 KDLFSF 664
>sp|O12944|RAD54_CHICK DNA repair and recombination protein RAD54-like (Fragment) OS=Gallus
gallus GN=RAD54L PE=2 SV=1
Length = 733
Score = 258 bits (660), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 180/593 (30%), Positives = 288/593 (48%), Gaps = 82/593 (13%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 621
+S L+ HQ G++F+W+ + R++ GCI+A MGLGKT Q I ++T +R
Sbjct: 138 LSRVLRPHQREGVKFLWDCVTS--RRIPGSH---GCIMADEMGLGKTLQCITLMWTLLRQ 192
Query: 622 ---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRV--FMLEDVSRDRRAELLAK- 675
+ A++V+P +++ NW E KW ++PL + E++ R + +
Sbjct: 193 SPDCKPEIEKAMVVSPSSLVRNWYNEVEKWLGGRIQPLAIDGGSKEEIDRKLVGSMNQRG 252
Query: 676 WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRADT 734
R + +I Y FR H + ALQ G +++CDE H +KN+ T
Sbjct: 253 LRVPSPILIISYETFR-----LHAE----------ALQKGSVGLVICDEGHRLKNSENQT 297
Query: 735 TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 794
QAL + RR+ ++G+P+QN+L+EY+ +V FV G LG++ EF+ F+ PI G+ +
Sbjct: 298 YQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFELPILKGRDAD 357
Query: 795 STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 854
++ + + +R L + + R +++ K LP K V+ +L+PLQ LYK FL
Sbjct: 358 ASEAERQKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQAELYKNFL 417
Query: 855 DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 914
+ + KI S + +L ++ NHP ++
Sbjct: 418 K-QAKPVEELKEGKINVSSLSSITSLKKLCNHPALI------------------------ 452
Query: 915 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC-S 973
Y+ + E ++GF + E SGKM++L IL + S
Sbjct: 453 YDKCVEE-------------EEGFMGALDLFPAGYSTKSVEPQLSGKMLVLDYILAVTKS 499
Query: 974 NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY-RLDGRTESSERQKLVE 1032
DK ++ S TLDL E KL + + Y RLDG +R K+VE
Sbjct: 500 TSNDKVVLVSNYTQTLDLFE-------------KLCRNRRYLYVRLDGTMSIKKRAKVVE 546
Query: 1033 RFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPV 1092
RFN P + ++S++AG G+NL ANR+++ D WNP D QA+ R WR GQ K
Sbjct: 547 RFNSPSSPEF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTC 605
Query: 1093 FAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEFGD 1144
+ YRL++ GT+EEKI++RQ K+ L++ VVD +Q V R S E+ LF +
Sbjct: 606 YIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFSLGELKELFSLNE 658
>sp|P70270|RAD54_MOUSE DNA repair and recombination protein RAD54-like OS=Mus musculus
GN=Rad54l PE=1 SV=2
Length = 747
Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 190/605 (31%), Positives = 295/605 (48%), Gaps = 88/605 (14%)
Query: 549 REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 608
+EK V + +S L+ HQ G++F+WE + R++ GCI+A MGLGKT
Sbjct: 136 KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190
Query: 609 FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 665
Q I ++T +R + A++V+P +++ NW E KW ++PL +
Sbjct: 191 LQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDGGSKDE 250
Query: 666 RDRRAELLAKWRA---KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCD 722
DR+ E R + +I Y FR L G +K N+ +++CD
Sbjct: 251 IDRKLEGFMNQRGARVPSPILIISYETFR-LHVGV-LKKGNVG------------LVICD 296
Query: 723 EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 782
E H +KN+ T QAL + RR+ ++G+P+QN+L+EY+ +V FV G LG++HEF+
Sbjct: 297 EGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKH 356
Query: 783 FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM----NVVKKDLPPKTVFVI 838
F+ PI + ++ D QR +L G V R + +++ K LP K V+
Sbjct: 357 FELPILKSRDAAASEAD----RQRGEERLRELIGIVNRCLIRRTSDILSKYLPVKIEQVV 412
Query: 839 TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 898
+L+PLQ LYKRFL + + K+ S + +L ++ NHP ++
Sbjct: 413 CCRLTPLQTELYKRFLR-QAKPEEELREGKMSVSSLSSITSLKKLCNHPALI-------- 463
Query: 899 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 958
Y+ + E+ D +G G F + + + E
Sbjct: 464 ----------------YDKCVAEE-----DGFEGTL--GIFPPGYNSKAV------EPQL 494
Query: 959 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1016
SGKM++L IL + S DK ++ S TLDL E KL + + Y
Sbjct: 495 SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRVRRYLYV 541
Query: 1017 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1076
RLDG +R K+VERFN P + ++S++AG G+NL ANR+++ D WNP D
Sbjct: 542 RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600
Query: 1077 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1135
QA+ R WR GQ K + YRL++ GT+EEKI++RQ K+ L++ VVD +Q V R S E
Sbjct: 601 EQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660
Query: 1136 MLHLF 1140
+ LF
Sbjct: 661 LKELF 665
>sp|P41410|RAD54_SCHPO DNA repair protein rhp54 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rhp54 PE=1 SV=2
Length = 852
Score = 258 bits (658), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 191/606 (31%), Positives = 300/606 (49%), Gaps = 91/606 (15%)
Query: 555 AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 614
AV I ++ L+ HQ+ G++F+++ + I + +G CI+A MGLGKT Q IA
Sbjct: 253 AVVIDPKLARILRPHQIEGVKFLYKCVTGRIDRCANG-----CIMADEMGLGKTLQCIAL 307
Query: 615 LYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA 670
L+T ++ S G + A+I P +++ NW E +KW + + F+L+ S +
Sbjct: 308 LWTLLKQSPQAGKPTIEKAIITCPSSLVKNWANELVKWLGKD--AITPFILDGKSSKQEL 365
Query: 671 EL-LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDE 723
+ L +W + G V + Y R S+ +H+ + + +L+CDE
Sbjct: 366 IMALQQWASVHGRQVTRPVLIASYETLR--SYVEHLNNAEIG------------MLLCDE 411
Query: 724 AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 783
H +KN+ + T AL ++ QRR+ L+G+P+QN+L EY+ +++F G LGS EFR +
Sbjct: 412 GHRLKNSDSLTFTALDKLNVQRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNY 471
Query: 784 QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 843
+ PI G+ + T +D + + + L + + F+ R +++ K LP K V+ LS
Sbjct: 472 EIPILKGRDADGTEKDKENGDAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVVFCNLS 531
Query: 844 PLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA---LAQIWNHPGILQLTKDKGYPS 900
Q LYK F+ T+ + N+ +R + +A L +I NHP +L LT+D
Sbjct: 532 EFQLSLYKHFI-----TSPEI-NKILRGTGSQPLKAIGLLKKICNHPDLLNLTEDL---- 581
Query: 901 REDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSG 960
E + G PR + + +N D SG
Sbjct: 582 ----------EGCEALFPPGFIPRELRG--RDRNIDS-------------------SLSG 610
Query: 961 KMVLLLDILTMCSN-MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1019
KM++L +L DK ++ S TLDL E +L R +G RLD
Sbjct: 611 KMLVLERMLYQIKQETDDKIVLISNYTSTLDLFE----QLCR--------ARGYKALRLD 658
Query: 1020 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1079
G ++RQ+LV+ FN+P K L+S++AG GINL ANR+I+ D WNP D QA
Sbjct: 659 GTMNVNKRQRLVDTFNDP-EKDAFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQA 717
Query: 1080 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLH 1138
+ R WR GQ K F YR +A GT+EEKI++RQ K+ L++ VVD Q V R S + +
Sbjct: 718 LARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQDVERHFSLDNLRQ 777
Query: 1139 LFEFGD 1144
LF+ D
Sbjct: 778 LFQLND 783
>sp|B3MMA5|RAD54_DROAN DNA repair and recombination protein RAD54-like OS=Drosophila
ananassae GN=okr PE=3 SV=1
Length = 791
Score = 257 bits (656), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 186/597 (31%), Positives = 299/597 (50%), Gaps = 94/597 (15%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 621
+S L+ HQ G+RFM+E + + K GD GCI+A MGLGKT Q + ++T +R
Sbjct: 155 LSNILRPHQREGVRFMYECV-----EGKKGDFN-GCIMADEMGLGKTLQCVTLVWTLLRQ 208
Query: 622 ---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRA 678
+ A++V+P +++ NW++EF KW L L + + R E + +
Sbjct: 209 GPESKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLAMEGGTKENTIRVLEQFSMTSS 268
Query: 679 KGG--VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 736
K G V LI Y FR + EI + G +++CDE H +KN+ T Q
Sbjct: 269 KLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLTYQ 314
Query: 737 ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 796
AL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+N I GQ+ +ST
Sbjct: 315 ALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENSILRGQNADST 374
Query: 797 SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 856
+ K +++ L + + R ++ K LP K VI VKL+ +Q +LY FL+
Sbjct: 375 EGERKKAIEKTQELIGLVDQCIIRRTNQILTKYLPIKFEMVICVKLTAIQLQLYTNFLN- 433
Query: 857 HGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQL---TKDKGYPSREDAEDS 907
+D+V NEK + A L +I +HP ++ K+KG+ + ++ S
Sbjct: 434 ----SDQVRRSLADCNEKASLTALADITTLKKICSHPDLIHQKIEAKEKGFENSQNVLPS 489
Query: 908 SSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLD 967
+ KP+ + ++SGK +LL
Sbjct: 490 NY------------KPKEICP----------------------------EWSGKFMLLDF 509
Query: 968 ILTMCSNMG-DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSE 1026
+L G DK ++ S TLDL E +L R K G + RLDG +
Sbjct: 510 MLAAIRAAGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGTMSIKK 557
Query: 1027 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1086
R K+V++FN+P + ++S++AG G+NL ANR+ + D WNP D QA+ R WR
Sbjct: 558 RSKVVDKFNDP-DSECFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRD 616
Query: 1087 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEF 1142
GQ KP + YRL+A GT+EEKI +RQ K+ L++ ++D + + +++++ LF F
Sbjct: 617 GQKKPCYIYRLVASGTIEEKILQRQTHKKSLSSTIIDNNESSEKHFTRDDLKDLFSF 673
>sp|O76460|RAD54_DROME DNA repair and recombination protein RAD54-like OS=Drosophila
melanogaster GN=okr PE=1 SV=1
Length = 784
Score = 255 bits (652), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 184/600 (30%), Positives = 297/600 (49%), Gaps = 100/600 (16%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 619
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q + ++T +
Sbjct: 152 LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLL 203
Query: 620 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELK--PLRVFMLEDVSRDRRAELLA 674
R + A++V+P +++ NW++EF KW L P+ E+ R +
Sbjct: 204 RQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMT 263
Query: 675 KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 734
R V LI Y FR + EI + G +++CDE H +KN+ T
Sbjct: 264 SARLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLT 309
Query: 735 TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 794
QAL +K +RR+ L+G+P+QN+L EYY +V+FV LG++ F+ F++ I GQ+T+
Sbjct: 310 YQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTD 369
Query: 795 STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 854
ST ++ + +++ L + + R ++ K LP K VI KL+ +Q LY FL
Sbjct: 370 STEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFL 429
Query: 855 DLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGIL--QLT-KDKGYPSREDAE 905
+D+V NEK + A L +I +HP ++ +LT ++KG+ + ++
Sbjct: 430 K-----SDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVL 484
Query: 906 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 965
S+ KP+++N L GK +L
Sbjct: 485 PSNY------------KPKDLNPELSGK-----------------------------FML 503
Query: 966 LDILTMC--SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1023
LD + + DK ++ S TLDL E +L R K G + RLDG
Sbjct: 504 LDFMLAAIRAEGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGTMS 551
Query: 1024 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1083
+R K+V+RFN+P + ++S++AG G+NL ANR+ + D WNP D QA+ R
Sbjct: 552 IKKRSKVVDRFNDPESDSF-LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARV 610
Query: 1084 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEF 1142
WR GQ KP + YRL+A G++EEKI +RQ K+ L++ ++D + + +++++ LF F
Sbjct: 611 WRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTF 670
>sp|B4JCS7|RAD54_DROGR DNA repair and recombination protein RAD54-like OS=Drosophila
grimshawi GN=okr PE=3 SV=1
Length = 786
Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 182/608 (29%), Positives = 298/608 (49%), Gaps = 115/608 (18%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 619
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q + +T +
Sbjct: 145 LSNVLRPHQREGVRFMYECV--------EGKRGSFNGCIMADEMGLGKTLQCVTLTWTLL 196
Query: 620 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 676
R + A++V+P +++ NW++EF KW + L +E S++ L ++
Sbjct: 197 RQSADCKPTISKAIVVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKEETTRTLEQF 253
Query: 677 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 730
R V LI Y FR H+ +C + +++CDE H +KN+
Sbjct: 254 AMNTSTRCGTPVLLISYETFR---LYAHI--------LC---KTEVGMVICDEGHRLKNS 299
Query: 731 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 790
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+N I G
Sbjct: 300 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTATDFKRNFENAILRG 359
Query: 791 QHTNSTSEDVKIMNQRSHILYEQLKGFVQ----RMDMNVVKKDLPPKTVFVITVKLSPLQ 846
Q+ +ST + +R+ + ++L G V R ++ K LP K V+ KL+ +Q
Sbjct: 360 QNADSTDTE----RERALLKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVVCAKLTAVQ 415
Query: 847 RRLYKRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKG 897
++Y FL +D+V NEK + + L ++ NHP ++ ++KG
Sbjct: 416 LQIYTNFLK-----SDQVCRSLADCNEKTSLTALSDITTLKKLCNHPDLIYEKLAAREKG 470
Query: 898 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 957
+ EN + KP+++N L GK
Sbjct: 471 F------------ENSQNVLPANYKPKDINPELSGK------------------------ 494
Query: 958 YSGKMVLLLDILTMC--SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDW 1015
+LLD + +N DK ++ S TLDL E +L R K+ +
Sbjct: 495 -----FMLLDFMLAAIRANSDDKVVLISNYTQTLDLFE----QLAR--------KRKYSY 537
Query: 1016 YRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTY 1075
RLDG +R K+V+RFN+P + ++S++AG G+NL ANR+ + D WNP
Sbjct: 538 VRLDGTMTIKKRSKVVDRFNDP-SSDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN 596
Query: 1076 DLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKE 1134
D QA+ R WR GQ KP + YRL+A G++EEKI +RQ K+ L++ ++D + V + +++
Sbjct: 597 DEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESVEKHFTRD 656
Query: 1135 EMLHLFEF 1142
++ LF F
Sbjct: 657 DLKDLFSF 664
>sp|B3NAN8|RAD54_DROER DNA repair and recombination protein RAD54-like OS=Drosophila erecta
GN=okr PE=3 SV=1
Length = 784
Score = 253 bits (647), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 188/607 (30%), Positives = 295/607 (48%), Gaps = 108/607 (17%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 619
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q + ++T +
Sbjct: 152 LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLL 203
Query: 620 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELK--PLRVFMLEDVSRDRRAELLA 674
R + A++V+P +++ NW++EF KW L P+ E+ R +
Sbjct: 204 RQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMT 263
Query: 675 KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 734
R V LI Y FR + EI + G +++CDE H +KN+ T
Sbjct: 264 SSRLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLT 309
Query: 735 TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 794
QAL +K +RR+ L+G+P+QN+L EYY +V+FV LG++ F+ F++ I GQ+T+
Sbjct: 310 YQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTD 369
Query: 795 STSEDVKIMNQRSHILYEQLKGFVQ----RMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 850
ST + QR+ ++L G V R ++ K LP K VI KL+ +Q LY
Sbjct: 370 STDAE----RQRAIAKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTSIQLELY 425
Query: 851 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSR 901
FL +D+V EK + A L +I +HP ++ +DKG+
Sbjct: 426 TNFL-----KSDQVRRSLADCKEKASLTALADITTLKKICSHPNLIYEKITARDKGF--- 477
Query: 902 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 961
E+S + +YN +++N L GK
Sbjct: 478 ---ENSQNVLPSNYNA------KDLNPELSGK---------------------------- 500
Query: 962 MVLLLDILTMC--SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1019
+LLD + ++ DK ++ S TLDL E +L R K G + RLD
Sbjct: 501 -FMLLDFMLAAIRADGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLD 547
Query: 1020 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1079
G +R K+V+RFN+P + ++S++AG G+NL ANR+ + D WNP D QA
Sbjct: 548 GTMSIKKRSKVVDRFNDPESDSF-LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQA 606
Query: 1080 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLH 1138
+ R WR GQ KP + YRL+A G++EEKI +RQ K+ L++ ++D + + +++++
Sbjct: 607 MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKD 666
Query: 1139 LFEFGDD 1145
LF F D
Sbjct: 667 LFTFDAD 673
>sp|B4NXB8|RAD54_DROYA DNA repair and recombination protein RAD54-like OS=Drosophila yakuba
GN=okr PE=3 SV=2
Length = 784
Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 183/603 (30%), Positives = 295/603 (48%), Gaps = 100/603 (16%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 619
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q + ++T +
Sbjct: 152 LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLL 203
Query: 620 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELK--PLRVFMLEDVSRDRRAELLA 674
R + A++V+P +++ NW++EF KW L P+ E+ R +
Sbjct: 204 RQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMT 263
Query: 675 KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 734
R V LI Y FR + EI + G +++CDE H +KN+ T
Sbjct: 264 SSRLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLT 309
Query: 735 TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 794
QAL +K +RR+ L+G+P+QN+L EYY +V+FV LG++ F+ F++ I GQ+T+
Sbjct: 310 YQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTD 369
Query: 795 STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 854
ST + + +++ L + + R ++ K LP K VI KL+ +Q LY FL
Sbjct: 370 STEGERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTSIQLELYTNFL 429
Query: 855 DLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSREDAE 905
+D+V NEK + A L +I +HP ++ ++KG+ E
Sbjct: 430 -----KSDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKITAREKGF------E 478
Query: 906 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 965
+S + +YN +++N L GK +L
Sbjct: 479 NSQNVLPSNYNT------KDLNPELSGK-----------------------------FML 503
Query: 966 LDILTMC--SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1023
LD + ++ DK ++ S TLDL E +L R K G + RLDG
Sbjct: 504 LDFMLAAIRADGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGTMS 551
Query: 1024 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1083
+R K+V+RFN+P + ++S++AG G+NL ANR+ + D WNP D QA+ R
Sbjct: 552 IKKRSKVVDRFNDPESDSF-LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARV 610
Query: 1084 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEF 1142
WR GQ KP + YR++A G++EEKI +RQ K+ L++ ++D + + +++++ LF F
Sbjct: 611 WRDGQKKPCYIYRMVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTF 670
Query: 1143 GDD 1145
D
Sbjct: 671 DAD 673
>sp|Q29KH2|RAD54_DROPS DNA repair and recombination protein RAD54-like OS=Drosophila
pseudoobscura pseudoobscura GN=okr PE=3 SV=2
Length = 782
Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 186/607 (30%), Positives = 303/607 (49%), Gaps = 106/607 (17%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 619
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q +A ++T +
Sbjct: 148 LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVALVWTLL 199
Query: 620 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 676
+ + +IV+P +++ NW++EF KW + L +E S++ L ++
Sbjct: 200 KQSAECKPTINKCIIVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKENTVRALEQF 256
Query: 677 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 730
R V LI Y FR + EI + G +++CDE H +KN+
Sbjct: 257 SMNASTRLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNS 302
Query: 731 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 790
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+N I G
Sbjct: 303 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENCILRG 362
Query: 791 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 850
Q+ +ST ++ +++ L + + + R ++ K LP K VI KL+P+Q +LY
Sbjct: 363 QNADSTDKERDRALEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVICAKLTPIQLQLY 422
Query: 851 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGIL---QLTKDKGYPSR 901
FL +D+V EK + A L ++ +HP ++ ++KG+
Sbjct: 423 TNFL-----KSDQVRRSLADCKEKASLTALADITTLKKLCSHPNLICEKIAAEEKGF--- 474
Query: 902 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 961
E+S + ++YN GE +N L GK +K LD+
Sbjct: 475 ---ENSQNILPINYNPK-GE----INPELSGK-------------------FKLLDFM-- 505
Query: 962 MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1021
+ + ++ DK ++ S TLDL E +L R K G + RLDG
Sbjct: 506 ------LAAIRAHGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGT 547
Query: 1022 TESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1079
+R K+V+RFN+P C L +S++AG G+NL ANR+ + D WNP D QA
Sbjct: 548 MSIKKRSKVVDRFNDP---ESDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQA 604
Query: 1080 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLH 1138
+ R WR GQ KP + YRL+A G++EEKI +RQ K+ L++ ++D + + +++++
Sbjct: 605 MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKD 664
Query: 1139 LFEFGDD 1145
LF F D
Sbjct: 665 LFSFDPD 671
>sp|Q6PFE3|RA54B_MOUSE DNA repair and recombination protein RAD54B OS=Mus musculus GN=Rad54b
PE=2 SV=1
Length = 886
Score = 250 bits (639), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 186/601 (30%), Positives = 296/601 (49%), Gaps = 89/601 (14%)
Query: 556 VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 615
V I + L+ HQ GI F++E ++ +R V G ILA MGLGKT Q I+ +
Sbjct: 264 VVIDPHLVHHLRPHQKDGIIFLYECVM-GMRAVGK----CGAILADEMGLGKTLQCISLI 318
Query: 616 YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 671
+T G ++ LIVTP ++++NW++EF KW SE +++F V +D + E
Sbjct: 319 WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSER--IKIFT---VDQDHKVE 373
Query: 672 LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 731
V +I Y ++ + + I L L+CDE H +KN+
Sbjct: 374 EFIN-STFHSVLIISYEML--------LRSLDQIKTIPFGL------LICDEGHRLKNSS 418
Query: 732 ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 791
TT AL + C++ + LTG+P+QN+L E++ +VDFV G LGS +R ++ PI +
Sbjct: 419 IKTTTALSSLSCEKTVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRKIYEEPIIISR 478
Query: 792 HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 851
+S+ E+ ++ +R+ L F+ R V+ K LPPK V+ + LQ LY+
Sbjct: 479 EPSSSKEERELGERRATELTRLTGRFILRRTQEVINKYLPPKIENVVFCRPGALQIELYR 538
Query: 852 RFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDA 904
+ L L G + + AL ++ NHP +L + S +
Sbjct: 539 KLLRSQSVRFCLQGLLEN--------SAHLICIGALKKLCNHPCLL-------FSSVKGK 583
Query: 905 EDSSS-DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMV 963
E SSS +EN + N+ G ++ F G N F +++ SGK+
Sbjct: 584 EFSSSCEENEERNLCQGL----LSVFPAGYNPLQFSEEE----------------SGKLQ 623
Query: 964 LLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1021
+L+ +L + + +K ++ S TL+++E + G RLDG+
Sbjct: 624 VLVKLLAVIHELRPTEKVILVSNYRQTLNVLEEVCK------------RHGYACARLDGQ 671
Query: 1022 TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 1081
T S+RQ +V+ FN + L+S++AG +G+NL + +I+ D WNP D+QA+
Sbjct: 672 TPVSQRQHIVDSFNSKYSTDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMS 730
Query: 1082 RAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEMLHL 1139
R WR GQ PV YRL+ GT+EEKIY+RQ++K+GL+ VVD R H S EE+ +L
Sbjct: 731 RVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRSSEHIQFSVEELKNL 790
Query: 1140 F 1140
F
Sbjct: 791 F 791
>sp|B4GS98|RAD54_DROPE DNA repair and recombination protein RAD54-like OS=Drosophila
persimilis GN=okr PE=3 SV=1
Length = 782
Score = 250 bits (639), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 186/607 (30%), Positives = 301/607 (49%), Gaps = 106/607 (17%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 619
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q +A ++T +
Sbjct: 148 LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVALVWTLL 199
Query: 620 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 676
+ + +IV+P +++ NW++EF KW + L +E S++ L ++
Sbjct: 200 KQSAECKPTINKCIIVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKENTVRALEQF 256
Query: 677 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 730
R V LI Y FR + EI + G +++CDE H +KN+
Sbjct: 257 SMNASTRLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNS 302
Query: 731 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 790
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+N I G
Sbjct: 303 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENCILRG 362
Query: 791 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 850
Q+ +ST ++ +++ L + + + R ++ K LP K VI KL+P+Q +LY
Sbjct: 363 QNADSTDKERDRALEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVICAKLTPIQLQLY 422
Query: 851 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGIL---QLTKDKGYPSR 901
FL +D+V EK + A L ++ +HP ++ +KG+
Sbjct: 423 TNFL-----KSDQVRRSLADCKEKASLTALADITTLKKLCSHPNLICEKIAAGEKGF--- 474
Query: 902 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 961
E+S + ++YN GE +N L GK +K LD+
Sbjct: 475 ---ENSQNILPINYNPK-GE----INPELSGK-------------------FKLLDFM-- 505
Query: 962 MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1021
+ + ++ DK ++ S TLDL E L R K G + RLDG
Sbjct: 506 ------LAAIRAHGNDKVVLISNYTQTLDLFEL----LARKRKYG--------FVRLDGT 547
Query: 1022 TESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1079
+R K+V+RFN+P C L +S++AG G+NL ANR+ + D WNP D QA
Sbjct: 548 MSIKKRSKVVDRFNDP---ESDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQA 604
Query: 1080 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLH 1138
+ R WR GQ KP + YRL+A G++EEKI +RQ K+ L++ ++D + + +++++
Sbjct: 605 MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKD 664
Query: 1139 LFEFGDD 1145
LF F D
Sbjct: 665 LFSFDPD 671
>sp|Q9Y620|RA54B_HUMAN DNA repair and recombination protein RAD54B OS=Homo sapiens GN=RAD54B
PE=1 SV=1
Length = 910
Score = 250 bits (638), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 186/605 (30%), Positives = 299/605 (49%), Gaps = 97/605 (16%)
Query: 556 VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 615
V I + L+ HQ GI F++E ++ +R + G ILA MGLGKT Q I+ +
Sbjct: 286 VVIDPYLVYHLRPHQKEGIIFLYECVM-GMRM----NGRCGAILADEMGLGKTLQCISLI 340
Query: 616 YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 671
+T G ++ LIVTP ++++NWK+EF KW SE +++F V +D + E
Sbjct: 341 WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSER--IKIFT---VDQDHKVE 395
Query: 672 LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 730
K V +I Y R+L K++K D+L+CDE H +KN+
Sbjct: 396 EFIK-SIFYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 439
Query: 731 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 790
TT AL + C++RI LTG+P+QN+L E++ ++DFV G LGS +R ++ PI
Sbjct: 440 AIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 499
Query: 791 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 850
+ +++ E+ ++ +R+ L F+ R ++ K LPPK V+ + LQ LY
Sbjct: 500 REPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELY 559
Query: 851 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 903
++ L+ L G + AL ++ NHP +L + S ++
Sbjct: 560 RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 604
Query: 904 AEDSSS----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 959
E SS+ +E Y ++ P + N L F +K+ S
Sbjct: 605 KECSSTCDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------S 641
Query: 960 GKMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1017
GK+ +L +L + + +K ++ S TL+++ Q + G + R
Sbjct: 642 GKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYAYTR 689
Query: 1018 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1077
LDG+T S+RQ++V+ FN + L+S++AG +G+NL + +I+ D WNP D+
Sbjct: 690 LDGQTPISQRQQIVDGFNSQ-HSSFFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDI 748
Query: 1078 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEE 1135
QA+ R WR GQ PV YRL+ GT+EEKIY+RQ++K+GL VVD + H S EE
Sbjct: 749 QAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEE 808
Query: 1136 MLHLF 1140
+ +LF
Sbjct: 809 LKNLF 813
>sp|B4M9A8|RAD54_DROVI DNA repair and recombination protein RAD54-like OS=Drosophila virilis
GN=okr PE=3 SV=1
Length = 786
Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 181/606 (29%), Positives = 293/606 (48%), Gaps = 111/606 (18%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 619
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q + +T +
Sbjct: 145 LSNVLRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLTWTLL 196
Query: 620 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 676
R + A++V+P +++ NW++EF KW + L +E S++ L ++
Sbjct: 197 RQSPDCKPTISKAIVVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKEDTTRTLEQF 253
Query: 677 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 730
R V LI Y FR S H+ +C + +++CDE H +KN+
Sbjct: 254 AMNTATRCGTPVLLISYETFRLYS---HI--------LC---KTEVGMVICDEGHRLKNS 299
Query: 731 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 790
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG+ +F+ F+N I G
Sbjct: 300 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTGSDFKRNFENAILRG 359
Query: 791 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 850
Q+ +ST + + +++ L + + R ++ K LP K V+ KL+ +Q +LY
Sbjct: 360 QNADSTDAERERALEKTQELVGLVNQCIIRRTNQILTKYLPVKFEMVVCAKLTAVQLQLY 419
Query: 851 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSR 901
FL +D+V +K + A L ++ NHP ++ ++KG+
Sbjct: 420 TNFL-----KSDQVRRSLADCTDKTTLTALADITTLKKLCNHPDLIYEKIAAREKGF--- 471
Query: 902 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 961
EN + KP+++N L GK
Sbjct: 472 ---------ENSQNVLPPNYKPKDVNPELSGK---------------------------- 494
Query: 962 MVLLLDILTMC--SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1019
+LLD + +N DK ++ S TLDL E +L R K+ + RLD
Sbjct: 495 -FMLLDFMLAAIRANSDDKVVLISNYTQTLDLFE----QLAR--------KRKYSYVRLD 541
Query: 1020 GRTESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1077
G +R K+V+RFN+P C L +S++AG G+NL ANR+ + D WNP D
Sbjct: 542 GTMTIKKRSKVVDRFNDPA---TDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDE 598
Query: 1078 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ-QVHRTISKEEM 1136
QA+ R WR GQ KP + YRL+A G++EEKI +RQ K+ L++ ++D + +++++
Sbjct: 599 QAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSSIIDNNDSAEKHFTRDDL 658
Query: 1137 LHLFEF 1142
LF F
Sbjct: 659 KDLFRF 664
>sp|Q9UR24|RHP26_SCHPO DNA repair protein rhp26 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rhp26 PE=4 SV=1
Length = 973
Score = 247 bits (631), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 191/624 (30%), Positives = 296/624 (47%), Gaps = 119/624 (19%)
Query: 553 EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 612
E IP I L +QV ++++WE Q G I+ MGLGKT Q++
Sbjct: 264 EGGFTIPGDIRPHLFRYQVTCVQWLWELYCQEA----------GGIIGDEMGLGKTIQIV 313
Query: 613 AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML------EDVSR 666
+FL + S + ALIV P ++ W EF W PLRV +L + SR
Sbjct: 314 SFLSSLHHSGKFQ-KPALIVCPATLMKQWVNEFHTW----WAPLRVVVLHATGSGQRASR 368
Query: 667 DRR-----AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC---HALQD---- 714
++R A +K + L G ++ SF ++ K N+ + H L
Sbjct: 369 EKRQYESDASESEAEESKTSIKLRGASS----SFHRYAK--NLVESVFTRGHILITTYAG 422
Query: 715 ----GPDIL-------VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYC 763
G IL V DE H I+N ++ + + KQ++ RI L+G+P+QNNL E +
Sbjct: 423 LRIYGDLILPREWGYCVLDEGHKIRNPDSEISISCKQIRTVNRIILSGTPIQNNLTELWN 482
Query: 764 MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMD 822
+ DFV G LG+ F+N+F PI G + N+++ V+ + + +L + + ++ +RM
Sbjct: 483 LFDFVFPGRLGTLPVFQNQFALPINIGGYANASNVQVQTAYKCACMLRDLISPYLLRRMK 542
Query: 823 MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQ 882
++V DLP K+ V+ KL+PLQR+ Y+ FL G ++ N K + G L +
Sbjct: 543 LDVAA-DLPKKSEQVLFCKLTPLQRKAYQDFL--QGSDMQKILNGK--RQMLYGIDILRK 597
Query: 883 IWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKD 942
I NHP ++ +RE +L K D
Sbjct: 598 ICNHPDLV---------TRE--------------------------YLLHKED------- 615
Query: 943 WWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1002
+ Y + + SGK+ ++ +LT+ G ++L+FSQ+ LD++E L LP
Sbjct: 616 --------YNYGDPEKSGKLKVIRALLTLWKKQGHRTLLFSQTRQMLDILEIGLKDLP-- 665
Query: 1003 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1062
+ R+DG T + RQ LV+ FN+ N+ L++TR G LG+NL A+
Sbjct: 666 ---------DVHYCRMDGSTSIALRQDLVDNFNK--NEYFDVFLLTTRVGGLGVNLTGAD 714
Query: 1063 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1122
RVI+ D WNP+ D QA RAWR GQ K V YRLM GT+EEKIY RQ+ K+ L +++
Sbjct: 715 RVILFDPDWNPSTDAQARERAWRLGQKKDVVVYRLMTAGTIEEKIYHRQIFKQFLTNKIL 774
Query: 1123 DRQQVHRTISKEEMLHLFEFGDDE 1146
+ R ++ LF GD++
Sbjct: 775 KDPKQRRFFKMTDLHDLFTLGDNK 798
>sp|Q9JIM3|RAD26_MOUSE Putative DNA repair and recombination protein RAD26-like OS=Mus
musculus GN=Rad26l PE=2 SV=2
Length = 699
Score = 247 bits (630), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 191/640 (29%), Positives = 287/640 (44%), Gaps = 123/640 (19%)
Query: 553 EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 612
E+ IP +I+ L+ +Q G +F++ + I+ G GCIL MGLGKT QVI
Sbjct: 109 EDGDSIPYTINRYLRDYQREGAQFLYRHYIE----------GRGCILGDDMGLGKTIQVI 158
Query: 613 AFLYTAM-----------------------RSVNLGLRTALIVTPVNVLHNWKQEFMKWR 649
+FL + + + + LIV P++VL+NWK E W
Sbjct: 159 SFLAAVLHKKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTW- 217
Query: 650 PSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC 709
RV +L +D ELL + K + L Y R + E
Sbjct: 218 ----GYFRVTVLHGSKKDN--ELLRLKQRKCEIALTTYETLR------------LCLEEL 259
Query: 710 HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 769
++L+ ++ DEAH IKN +A T+ +K VKC+ RI LTG+ LQNN+ E +C++D+
Sbjct: 260 NSLEWSA--IIVDEAHRIKNPKARVTEVMKAVKCKVRIGLTGTVLQNNMKELWCVMDWAV 317
Query: 770 EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 829
G LGS F+ +F +P+E+GQ +T ++ + H L +++ G+ R ++K
Sbjct: 318 PGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGWFLRRTKTLIKGQ 377
Query: 830 LPPKTVFVITVKLSPLQRRLYKRFLDLHGF------------------------TNDRVS 865
LP K ++ L+ Q+ +Y+ L+ TN R
Sbjct: 378 LPKKEDRMVYCSLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSR-- 435
Query: 866 NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRN 925
+ +R + L ++ NH +LQ A +S + +
Sbjct: 436 GDTVRTLCLSYLTVLQKVANHVALLQ------------AASTSKHQETVIKRICDRVFSR 483
Query: 926 MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQS 985
DF+Q D F T + YSGKM +L +L DK L+FS S
Sbjct: 484 FPDFVQKSKDAAF------------ETLSDPKYSGKMKVLQQLLNHFRKQRDKVLLFSFS 531
Query: 986 IPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCT 1045
LD+++ Y G D+ RLDG T+S ER K+V+ FN ++ V
Sbjct: 532 TKLLDVLQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--SQDVNIC 577
Query: 1046 LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEE 1105
L+ST AG LG+N AN VI+ D +WNP DLQA+ RA+R GQ + V RL++ GT+EE
Sbjct: 578 LVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEE 637
Query: 1106 KIYKRQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1140
+Y RQV K+ L VV + R SKE LF
Sbjct: 638 IMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELF 677
>sp|Q5T890|RAD26_HUMAN Putative DNA repair and recombination protein RAD26-like OS=Homo
sapiens GN=RAD26L PE=1 SV=1
Length = 712
Score = 244 bits (622), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 187/634 (29%), Positives = 284/634 (44%), Gaps = 120/634 (18%)
Query: 558 IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 617
IP +I+ L+ +Q G RF++ + I G GCIL MGLGKT QVI+FL
Sbjct: 126 IPYTINRYLRDYQREGTRFLYGHYIH----------GGGCILGDDMGLGKTVQVISFLAA 175
Query: 618 AM------------------RSV------NLGLRTALIVTPVNVLHNWKQEFMKWRPSEL 653
+ RS+ + + LIV P++VL+NWK E W
Sbjct: 176 VLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTW----- 230
Query: 654 KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 713
RV +L +D EL+ + K + L Y R + + ++L+
Sbjct: 231 GYFRVTVLHGNRKDN--ELIRVKQRKCEIALTTYETLR------------LCLDELNSLE 276
Query: 714 DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 773
++ DEAH IKN +A T+ +K +KC RI LTG+ LQNN+ E +C++D+ G L
Sbjct: 277 WSA--VIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLL 334
Query: 774 GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 833
GS F+ +F +P+E+GQ +T ++ + L +++ G+ R ++K LP K
Sbjct: 335 GSGTYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKK 394
Query: 834 TVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKIRK 871
++ L+ Q+ +Y+ L+ T E ++
Sbjct: 395 EDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGQKRRNCCYKTNSHGETVKT 454
Query: 872 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 931
+ + L ++ NH +LQ A +S + + + DF+Q
Sbjct: 455 LYLSYLTVLQKVANHVALLQ------------AASTSKQQETLIKRICDQVFSRFPDFVQ 502
Query: 932 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 991
D F T + YSGKM +L +L C DK L+FS S LD+
Sbjct: 503 KSKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDV 550
Query: 992 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1051
++ Y G D+ RLDG T+S ER K+V+ FN + V L+ST A
Sbjct: 551 LQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--TQDVNICLVSTMA 596
Query: 1052 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1111
G LG+N AN V++ D +WNP DLQAI RA+R GQ + V RL++ GT+EE +Y RQ
Sbjct: 597 GGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQ 656
Query: 1112 VTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1140
+ K+ L VV + R SKE LF
Sbjct: 657 IYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELF 690
>sp|P32863|RAD54_YEAST DNA repair and recombination protein RAD54 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RAD54 PE=1
SV=1
Length = 898
Score = 234 bits (596), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 204/688 (29%), Positives = 319/688 (46%), Gaps = 120/688 (17%)
Query: 475 KKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSK-SKLMNSVTLDGDLSAGASI 533
K +R +L D+E E K+K A S+ V K +K++ ++G +
Sbjct: 237 KPLRELLGDSENSAENKKKFA----------SVPVVIDPKLAKILRPHQVEG-------V 279
Query: 534 EVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDK 593
L +TG +V + EA +S LK+ E + +K + ++
Sbjct: 280 RFLYRCVTG----LVMKDYLEAEAFNTSSEDPLKSD---------EKALTESQKTEQNNR 326
Query: 594 G-LGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLR---TALIVTPVNVLHNWKQEFMKWR 649
G GCI+A MGLGKT Q IA ++T +R G R +IV P ++++NW E +KW
Sbjct: 327 GAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWL 386
Query: 650 -PSELKPLRVFMLEDV---SRDRRAELLAKWRAKGG------VFLIGY-TAFRNLSFGKH 698
P+ L PL V + ++ + W G V +I Y T RN+
Sbjct: 387 GPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVD---Q 443
Query: 699 VKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNL 758
+K+ N+ +++ DE H +KN + T AL + C RR+ L+G+P+QN+L
Sbjct: 444 LKNCNVG------------LMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDL 491
Query: 759 MEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV 818
EY+ ++ F G LGS EFR F+NPI G+ ++T +++ + L + F+
Sbjct: 492 SEYFALLSFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFI 551
Query: 819 QRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFA 875
R +++ K LP K VI V L PLQ LY + + ++ ++ +R
Sbjct: 552 IRRTNDILAKYLPCKYEHVIFVNLKPLQNELYNKLIKSREVKKVVKGVGGSQPLR----- 606
Query: 876 GYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKND 935
L ++ NHP +L E ++ + DYN+ G K R++
Sbjct: 607 AIGILKKLCNHPNLLNFED-------EFDDEDDLELPDDYNMP-GSKARDV--------- 649
Query: 936 DGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEF 994
+ YS K +L L + + DK ++ S TLDLIE
Sbjct: 650 -------------------QTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIE- 689
Query: 995 YLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1054
K+ R K RLDG ++RQKLV+RFN+P + L+S++AG
Sbjct: 690 ---KMCR--------YKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEF-IFLLSSKAGGC 737
Query: 1055 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1114
GINL ANR+I++D WNP D QA+ R WR GQ K F YR ++ GT+EEKI++RQ K
Sbjct: 738 GINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMK 797
Query: 1115 EGLAARVVD-RQQVHRTISKEEMLHLFE 1141
L++ VVD ++ V R S + + LF+
Sbjct: 798 MSLSSCVVDAKEDVERLFSSDNLRQLFQ 825
>sp|Q09772|RDH54_SCHPO Meiotic recombination protein rdh54 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rdh54 PE=1 SV=3
Length = 811
Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 177/604 (29%), Positives = 284/604 (47%), Gaps = 103/604 (17%)
Query: 556 VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 615
V I +S L +HQ G+ F+++ ++ G G ILA MGLGKT Q I +
Sbjct: 195 VVIDPFLSKHLYSHQREGVSFLYDCLLG-----MEGKCGYSAILADEMGLGKTLQTITVV 249
Query: 616 YTAMRSVNLGLRT-----ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA 670
+T ++ R+ A++V PV +L NW+ EF W E + V++ R A
Sbjct: 250 WTLLKQSYYANRSSTINNAMVVAPVTLLKNWENEFYNWLGHE--RIHVYI------ARCA 301
Query: 671 ELLAKWRAKG--GVFLIGY----TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 724
E ++ + + + GY T RN G + D+L+CDEA
Sbjct: 302 EDFQEFTSNKTYSIIITGYETVCTYLRNYGCGIDI-----------------DLLICDEA 344
Query: 725 HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 784
H +K+ + T L ++K ++R+ LTG+PLQN+L EY+ MV+F+ G LG+ + F+ +++
Sbjct: 345 HRLKSMSSQTWITLNKLKTRKRLLLTGTPLQNDLSEYFSMVNFIIPGSLGTPNSFKAQYE 404
Query: 785 NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP 844
PI + N++S D+ + R L+E F R N++ K LPP+T V+ +K +
Sbjct: 405 RPILRSRSMNASSRDISLGAARLQRLFEFTSNFTLRRKANILAKHLPPRTDIVLFIKPTH 464
Query: 845 LQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDA 904
Q +Y LD GF S+ + + L++I N +L R +
Sbjct: 465 QQENVYGHVLD--GFK----SSVDQKGYYLKILTRLSKICNSTILL----------RNEK 508
Query: 905 EDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVL 964
E+ S E D +V F+++ N LL S K+ +
Sbjct: 509 ENFLSTELQDKHV---------------------FEQE--NMLLS---------SSKLQI 536
Query: 965 LLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTES 1024
L +L K+++ SQ TL+LIE +LS L + +L G T
Sbjct: 537 LAALLKSFQRGCQKAVIVSQYKETLELIELFLSIL------------HVRFCKLLGSTPF 584
Query: 1025 SERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAW 1084
SER +V FN K L+S++AG G+NL + R+II + SWNP DLQA+ R +
Sbjct: 585 SERDLIVHNFNTSSFKEFSVLLLSSKAGGCGLNLTGSTRLIIYEPSWNPAQDLQALSRIY 644
Query: 1085 RYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR--QQVHRTISKEEMLHLFEF 1142
R GQ +PV Y ++ G ++E+I+ RQ TK+GL++ +D Q + E++ LF +
Sbjct: 645 RSGQKRPVCIYTFLSSGMLDERIFIRQNTKQGLSSSFIDSDASQKKNFFTGEDIKTLFSY 704
Query: 1143 GDDE 1146
E
Sbjct: 705 SKTE 708
>sp|A2BGR3|ERC6L_DANRE DNA excision repair protein ERCC-6-like OS=Danio rerio GN=ercc6l PE=1
SV=1
Length = 1451
Score = 230 bits (587), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 200/695 (28%), Positives = 317/695 (45%), Gaps = 122/695 (17%)
Query: 565 KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 624
KL HQ G+ F++ ++ + RK G ILA MGLGKT QVI+FL + M L
Sbjct: 104 KLYDHQKEGVAFLY-SLYRDGRK--------GGILADDMGLGKTIQVISFL-SGMYDAEL 153
Query: 625 GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFL 684
T L+V P +++ NW +EF KW P +RV S+ R L + + KGGV +
Sbjct: 154 ANHT-LLVMPTSLIKNWVREFAKWTPG----MRVKEFHGSSKTERNRNLERIQRKGGVII 208
Query: 685 IGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQ 744
Y N N RE D ++ DEAH IK + T ++ + +
Sbjct: 209 TTYQMLIN---NYEQLGSNGHREFKW------DYVILDEAHKIKTSSTKTAKSAHAIPAK 259
Query: 745 RRIALTGSPLQNNLMEYYCMVDFVREG-FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 803
R+ LTG+P+QNNL E + + DF +G LG+S F+ ++NPI + ++T + +
Sbjct: 260 NRVLLTGTPVQNNLREMWALFDFACQGSLLGTSKTFKTEYENPITRAREKDATPGEKALG 319
Query: 804 NQRSHILYEQLKG-FVQRMDMNVVKK----------------------------DLPPKT 834
+ S L + +K F++R +V +K L K
Sbjct: 320 LRISQNLTDIIKPYFLRRTKADVQQKKLKLEEGFEEEEDQENKCPNAREGVEMPSLTRKN 379
Query: 835 VFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP------G 888
++ LS +Q +Y +F+ L + +S A L ++ +HP
Sbjct: 380 DLIVWTYLSSVQEDIYNKFISLDQIKELLTTT----RSPLAELTVLKKLCDHPRLLSQRA 435
Query: 889 ILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL 948
++QL ++G D+E SDE+ I D +
Sbjct: 436 VIQLGLERG----SDSELVHSDESESAVSQI--------------------------DNI 465
Query: 949 HEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL 1008
+HT ++ SGK+ ++ ++ G ++L+FSQS LD++E L
Sbjct: 466 SDHTL--IEESGKLQFVVSLMECLREEGHRTLIFSQSRKMLDIMERVLRN---------- 513
Query: 1009 WKKGKDWYRLDGR-TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1067
+ RLDG T+ +ER+K + F +KR L++T+ G +GI L ANRV+I
Sbjct: 514 --RNFRLLRLDGTVTQLAEREKRISLFQ--TDKRYTIFLLTTQVGGVGITLTGANRVVIF 569
Query: 1068 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV-DRQQ 1126
D SWNP D QA+ RA+R GQT+ V YRL+ GT+EEKIY+RQV K+ L + D++
Sbjct: 570 DPSWNPATDAQAVDRAYRIGQTENVIIYRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKN 629
Query: 1127 VHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALKHKLPLSHE----GCS 1182
R SK+E+ LF+ D + + + Q S+ ++ +L H + H G S
Sbjct: 630 PFRYFSKQELRELFKLEDTRSSSTQQQLQAMHAQ--SRRSDTSLDHHIARLHSMEMFGIS 687
Query: 1183 D-KLM---ESLLGKHHPRWISNYHEHETLLQENEE 1213
D LM E + P ++H +T +Q+ +E
Sbjct: 688 DHDLMFTKEPAADEDDPEDAESHHYIQTRVQKAQE 722
>sp|P40352|RAD26_YEAST DNA repair and recombination protein RAD26 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RAD26 PE=1
SV=1
Length = 1085
Score = 227 bits (579), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 186/630 (29%), Positives = 282/630 (44%), Gaps = 114/630 (18%)
Query: 546 NVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGL 605
N+ K +IP I + L +Q +++++E Q+ G I+ MGL
Sbjct: 277 NIPDAKLNSQFKIPGEIYSLLFNYQKTCVQWLYELYQQNC----------GGIIGDEMGL 326
Query: 606 GKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 665
GKT QVIAF+ A+ L LIV P V+ W EF W P PLR +L +
Sbjct: 327 GKTIQVIAFI-AALHHSGLLTGPVLIVCPATVMKQWCNEFQHWWP----PLRTVILHSMG 381
Query: 666 RDRRAELLAKWRAKGGVFLI--------GYTAFRNLSFGKHVKDR--NMAREICHALQDG 715
++ K LI Y ++N + K + ++ + I + DG
Sbjct: 382 SGMASDQKFKMDENDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDG 441
Query: 716 PDIL---------------------VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPL 754
++ V DE H I+N ++ + K++K RI L+G+P+
Sbjct: 442 HILITTYVGLRIHSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPI 501
Query: 755 QNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQL 814
QNNL E + + DF+ G LG+ F+ +F PI G + N+T+ V+ + + L + +
Sbjct: 502 QNNLTELWSLFDFIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLI 561
Query: 815 KGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFF 874
++ R V KDLP K V+ KL+ QR Y FL H +++ N K ++
Sbjct: 562 SPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRSKYLEFL--HSSDLNQIQNGK--RNVL 617
Query: 875 AGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKN 934
G L +I NHP + L +D + N DY G+ R
Sbjct: 618 FGIDILRKICNHPDL--LDRD------------TKRHNPDY----GDPKR---------- 649
Query: 935 DDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEF 994
SGKM ++ +L + G K+L+F+QS LD++E
Sbjct: 650 ------------------------SGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEE 685
Query: 995 YLS-KLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGS 1053
++S K P ++ R+DG T RQ LV+RFN N+ L++TR G
Sbjct: 686 FISTKDPDLSHL--------NYLRMDGTTNIKGRQSLVDRFN---NESFDVFLLTTRVGG 734
Query: 1054 LGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVT 1113
LG+NL ANR+II D WNP+ D+QA RAWR GQ + V YRLM G++EEKIY RQ+
Sbjct: 735 LGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIF 794
Query: 1114 KEGLAARVVDRQQVHRTISKEEMLHLFEFG 1143
K+ L R++ + R E+ LF G
Sbjct: 795 KQFLTNRILTDPKQKRFFKIHELHDLFSLG 824
>sp|Q8BHK9|ERC6L_MOUSE DNA excision repair protein ERCC-6-like OS=Mus musculus GN=Ercc6l
PE=1 SV=1
Length = 1240
Score = 223 bits (568), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 180/607 (29%), Positives = 284/607 (46%), Gaps = 94/607 (15%)
Query: 565 KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 624
KL HQ GI F++ K G KG ILA MGLGKT Q+IAFL + M +L
Sbjct: 96 KLFEHQKEGIAFLYS-------LYKDGRKG--GILADDMGLGKTVQIIAFL-SGMFDASL 145
Query: 625 GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFL 684
+ L++ P N+++ W EF KW P +RV S+ R L + + + GV +
Sbjct: 146 -VNHVLLIMPTNLINTWVNEFAKWTPG----MRVKTFHGSSKSERTRSLTRIQQRNGVVI 200
Query: 685 IGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQ 744
Y L+ + + N + D ++ DEAH IK+ + + +
Sbjct: 201 TTYQML--LNNWQQLASFNGQAFVW-------DYVILDEAHKIKSASTKSAVCARAIPAS 251
Query: 745 RRIALTGSPLQNNLMEYYCMVDFVREG-FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 803
R+ LTG+P+QNNL E + + DF +G LG+ F+ +++PI + ++T + +
Sbjct: 252 NRLLLTGTPVQNNLQELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEKALG 311
Query: 804 NQRSHILYEQLKGFVQRM---DMNVVKKDLPP---------------------KTVFVIT 839
+ S L E +K + R ++ K D P K ++
Sbjct: 312 LKISENLMEIIKPYFLRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDLIVW 371
Query: 840 VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 899
++L PLQ +Y++F+ L + +S A L ++ +HP +L +
Sbjct: 372 IRLLPLQEEIYRKFVSLDHIKELLMET----RSPLAELGVLKKLCDHPRLLSARACRLL- 426
Query: 900 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 959
+ A S+ DEN +V NMN D L + T + S
Sbjct: 427 NLGTATFSAQDENEQEDV------SNMNSI----------------DHLPDKTL--IQES 462
Query: 960 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1019
GKM+ L+ +L + G ++LVFSQSI L++IE L + K +K R+D
Sbjct: 463 GKMIFLMSLLERLQDEGHQTLVFSQSIKILNIIERLL--------KNKHFKT----LRID 510
Query: 1020 GR-TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1078
G T ER+K ++ F + NK L++T+ G +G+ L +A RV+I D SWNP D Q
Sbjct: 511 GTVTHLWEREKRIQLFQQ--NKEYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQ 568
Query: 1079 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV-DRQQVHRTISKEEML 1137
A+ R +R GQ + V YRL+ GT+EEKIY+RQV K+ L + +++ R +K+E+
Sbjct: 569 AVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFTKQELK 628
Query: 1138 HLFEFGD 1144
LF GD
Sbjct: 629 ELFTVGD 635
>sp|Q2NKX8|ERC6L_HUMAN DNA excision repair protein ERCC-6-like OS=Homo sapiens GN=ERCC6L
PE=1 SV=1
Length = 1250
Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 177/615 (28%), Positives = 286/615 (46%), Gaps = 106/615 (17%)
Query: 565 KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 624
+L HQ GI F++ ++ + RK G ILA MGLGKT Q+IAFL + M +L
Sbjct: 95 QLFEHQKEGIAFLY-SLYRDGRK--------GGILADDMGLGKTVQIIAFL-SGMFDASL 144
Query: 625 GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFL 684
+ L++ P N+++ W +EF+KW P +RV S+D R L + + + GV +
Sbjct: 145 -VNHVLLIMPTNLINTWVKEFIKWTPG----MRVKTFHGPSKDERTRNLNRIQQRNGVII 199
Query: 685 IGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRADTTQALKQVKC 743
Y N N + Q+ D ++ DEAH IK + + + +
Sbjct: 200 TTYQMLIN----------NWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPA 249
Query: 744 QRRIALTGSPLQNNLMEYYCMVDFVREG-FLGSSHEFRNRFQNPIENGQHTNSTSEDVKI 802
R+ LTG+P+QNNL E + + DF +G LG+ F+ ++NPI + ++T + +
Sbjct: 250 SNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKAL 309
Query: 803 MNQRSHILYEQLKG-FVQRMDMNVVKK-----------------------DLPPKTVFVI 838
+ S L +K F++R +V KK L K +I
Sbjct: 310 GFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEARLNEKNPDVDAICEMPSLSRKNDLII 369
Query: 839 TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK---- 894
++L PLQ +Y++F+ L + +S A L ++ +HP +L
Sbjct: 370 WIRLVPLQEEIYRKFVSLDHIKELLMET----RSPLAELGVLKKLCDHPRLLSARACCLL 425
Query: 895 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYK 954
+ G S +D + ++D+ + DD ++
Sbjct: 426 NLGTFSAQDGNEGEDSPDVDH--------------IDQVTDDTLMEE------------- 458
Query: 955 ELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 1014
SGKM+ L+D+L + G ++LVFSQS L++IE L + + +K
Sbjct: 459 ----SGKMIFLMDLLKRLRDEGHQTLVFSQSRQILNIIERLL--------KNRHFKT--- 503
Query: 1015 WYRLDGR-TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1073
R+DG T ER+K + F + NK L++T+ G +G+ L +A RV+I D SWNP
Sbjct: 504 -LRIDGTVTHLLEREKRINLFQQ--NKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNP 560
Query: 1074 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV-DRQQVHRTIS 1132
D QA+ R +R GQ + V YRL+ GT+EEKIY+RQV K+ L + +++ R S
Sbjct: 561 ATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFS 620
Query: 1133 KEEMLHLFEFGDDEN 1147
K+E+ LF D +N
Sbjct: 621 KQELRELFTIEDLQN 635
>sp|A6QQR4|ERC6L_BOVIN DNA excision repair protein ERCC-6-like OS=Bos taurus GN=ERCC6L PE=2
SV=1
Length = 1242
Score = 221 bits (562), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 180/610 (29%), Positives = 289/610 (47%), Gaps = 94/610 (15%)
Query: 565 KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 624
+L +Q GI F++ S+ + D G ILA MGLGKT Q+IAFL + M +L
Sbjct: 95 QLYEYQKEGIAFLY-----SLYR----DGRRGGILADDMGLGKTVQIIAFL-SGMFDASL 144
Query: 625 GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFL 684
+ L++ P +++ W +EF+KW P +RV S+D R L + + + GV +
Sbjct: 145 -VNHVLLIMPTSLISTWLREFVKWTPG----MRVKTFHGPSKDERTRNLCRIQQRNGVII 199
Query: 685 IGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQ 744
Y N + + N + D ++ DEAH IK++ + + +
Sbjct: 200 TTYQMLIN--NWQQLSSLNGQEFLW-------DYVILDEAHKIKSSSTKSAICARAIPAS 250
Query: 745 RRIALTGSPLQNNLMEYYCMVDFVREG-FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 803
RI LTG+P+QNNL E + + DF +G LG+ F+ ++NPI + ++T + +
Sbjct: 251 NRILLTGTPIQNNLQELWSLFDFACQGSLLGTLRTFKMEYENPITRAREKDATPGEKALG 310
Query: 804 NQRSHILYEQLKG-FVQRMDMNVVKK-----------------------DLPPKTVFVIT 839
+ S L +K F++R V KK L K +I
Sbjct: 311 FKISENLMAIIKPYFLRRTKEEVQKKKSSNPEVQLSEKSPDVGAICEMPSLSRKNDLIIW 370
Query: 840 VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 899
++L PLQ +Y++F+ L + +S A L ++ +HP +L + G
Sbjct: 371 IRLVPLQEEIYRKFVSLDHIKELLMET----RSPLAELGVLKKLCDHPRLLS-ARACGLL 425
Query: 900 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 959
+ A+ S DE + GE ++ D + +DD ++ S
Sbjct: 426 NLGAAKFSVQDE------IEGEDSSDV-DHIDQISDDTLMEE-----------------S 461
Query: 960 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1019
GKM+ L+D+L + G ++LVFSQS L++IE L + K+ R+D
Sbjct: 462 GKMLFLMDLLKKLRDEGHQTLVFSQSRRILNIIERLLK-----NRHFKIL-------RID 509
Query: 1020 GR-TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1078
G T ER+K + F + NK L++T+ G +G+ L +A+RV+I D SWNP D Q
Sbjct: 510 GTITHLVEREKRISLFQQ--NKDYSVFLLTTQVGGVGLTLTAASRVVIFDPSWNPATDAQ 567
Query: 1079 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV-DRQQVHRTISKEEML 1137
A+ R +R GQ + V YRL+ GT+EEKIY+RQV K+ L + D++ R SK+E+
Sbjct: 568 AVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFSKQELR 627
Query: 1138 HLFEFGDDEN 1147
LF D +N
Sbjct: 628 ELFTIEDFQN 637
>sp|C7GQI8|RDH54_YEAS2 DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain JAY291) GN=RDH54 PE=3 SV=1
Length = 924
Score = 203 bits (516), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 173/628 (27%), Positives = 277/628 (44%), Gaps = 128/628 (20%)
Query: 566 LKAHQVVGIRFMWENIIQSIRK--------------VKSGDKGL-GCILAHTMGLGKTFQ 610
L+ HQ G++FM++ ++ R V D + GC+LA MGLGKT
Sbjct: 262 LRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLM 321
Query: 611 VIAFLYTAMRSVNLGLRTA---------------LIVTPVNVLHNWKQEFMKWRPSELKP 655
I ++T +R + + L+V PV ++ NWK+EF KW L
Sbjct: 322 SITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKW----LNL 377
Query: 656 LRVFMLEDVSR-----DRRA-ELLAKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMAREI 708
R+ +L SR D+ A K + V +IGY LS + + K++++
Sbjct: 378 SRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL--LSVSEELEKNKHLI--- 432
Query: 709 CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 768
D+LVCDE H +KN + LK + +R++ LTG+P+QN+L E++ ++DF+
Sbjct: 433 --------DMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFI 484
Query: 769 REGFLGSSHEFRNRFQNPIENGQHTNS--TSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 826
G LGS F+ RF PI + T + E +K +RS + E K F+ R ++
Sbjct: 485 NPGILGSFASFKRRFIIPITRARDTANRYNEELLKKGEERSKEMIEITKRFILRRTNAIL 544
Query: 827 KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWN 885
+K LPPKT ++ K Q +K L R+ ++ S G L ++ N
Sbjct: 545 EKYLPPKTDIILFCKPYSQQILAFKDILQ-----GARLDFGQLTFSSSLGLITLLKKVCN 599
Query: 886 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 945
PG+ +G P + K
Sbjct: 600 SPGL-----------------------------VGSDP---------------YYKSHIK 615
Query: 946 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1004
D + +Y SGK+ +L+ +L + +K +V S TLD+IE ++
Sbjct: 616 DTQSQDSYSRSLNSGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMN------- 668
Query: 1005 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1064
G RLDG + +R +V FN N + L+S ++G +G+NL A+R+
Sbjct: 669 -----MAGMSHCRLDGSIPAKQRDSIVTSFNR--NPAIFGFLLSAKSGGVGLNLVGASRL 721
Query: 1065 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1124
I+ D WNP+ DLQA+ R R GQ KP F YRL+ G ++EKI +RQ+ K L+ + +
Sbjct: 722 ILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGD 781
Query: 1125 QQVHR-------TISKEEMLHLFEFGDD 1145
++ +KE++ LF D
Sbjct: 782 SEMRNKESSNDDLFNKEDLKDLFSVHTD 809
>sp|B3LN76|RDH54_YEAS1 DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=RDH54 PE=3 SV=1
Length = 924
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 171/627 (27%), Positives = 275/627 (43%), Gaps = 126/627 (20%)
Query: 566 LKAHQVVGIRFMWENIIQSIRK--------------VKSGDKGL-GCILAHTMGLGKTFQ 610
L+ HQ G++FM++ ++ R V D + GC+LA MGLGKT
Sbjct: 262 LRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLM 321
Query: 611 VIAFLYTAMRSVNLGLRTA---------------LIVTPVNVLHNWKQEFMKWRPSELKP 655
I ++T +R + + L+V PV ++ NWK+EF KW L
Sbjct: 322 SITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKW----LNL 377
Query: 656 LRVFMLEDVSR-----DRRA-ELLAKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMAREI 708
R+ +L SR D+ A K + V +IGY LS + + K++++
Sbjct: 378 SRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL--LSVSEELEKNKHLI--- 432
Query: 709 CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 768
D+LVCDE H +KN + LK + +R++ LTG+P+QN+L E++ ++DF+
Sbjct: 433 --------DMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFI 484
Query: 769 REGFLGSSHEFRNRFQNPIENGQHTNS--TSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 826
G LGS F+ RF PI + T + E ++ +RS + E K F+ R ++
Sbjct: 485 NPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAIL 544
Query: 827 KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 886
+K LPPKT ++ K Q +K L R++ S L ++ N
Sbjct: 545 EKYLPPKTDIILFCKPYSQQILAFKDILQGARLDFGRLT----FSSSLGLITLLKKVCNS 600
Query: 887 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 946
PG+ +G P + K D
Sbjct: 601 PGL-----------------------------VGSDP---------------YYKSHIKD 616
Query: 947 LLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1005
+ +Y SGK+ +L+ +L + +K +V S TLD+IE ++
Sbjct: 617 TQSQDSYSRSLNSGKLRVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMN-------- 668
Query: 1006 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1065
G RLDG + +R +V FN N + L+S ++G +G+NL A+R+I
Sbjct: 669 ----MAGMSHCRLDGSIPAKQRDSIVTSFNR--NPAIFGFLLSAKSGGVGLNLVGASRLI 722
Query: 1066 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ 1125
+ D WNP+ DLQA+ R R GQ KP F YRL+ G ++EKI +RQ+ K L+ + +
Sbjct: 723 LFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGDS 782
Query: 1126 QVHR-------TISKEEMLHLFEFGDD 1145
++ +KE++ LF D
Sbjct: 783 EMRNKESSNDDLFNKEDLKDLFSVHTD 809
>sp|P32333|MOT1_YEAST TATA-binding protein-associated factor MOT1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MOT1 PE=1 SV=1
Length = 1867
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 177/678 (26%), Positives = 298/678 (43%), Gaps = 85/678 (12%)
Query: 543 YIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHT 602
+I ++ + ++P +I A L+ +Q G+ W + L IL
Sbjct: 1249 FIQQMMDPSKAKPFKLPIAIKATLRKYQQDGVN--WLAFLNKYH--------LHGILCDD 1298
Query: 603 MGLGKTFQVIAFL----------YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE 652
MGLGKT Q I + Y RSV +LI+ P ++ +W+ EF ++ P
Sbjct: 1299 MGLGKTLQTICIIASDQYLRKEDYEKTRSVESRALPSLIICPPSLTGHWENEFDQYAPF- 1357
Query: 653 LKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHAL 712
L+V + R L + + + Y RN ++
Sbjct: 1358 ---LKVVVYAGGPTVRLT--LRPQLSDADIIVTSYDVARN--------------DLAVLN 1398
Query: 713 QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 772
+ + V DE H+IKN+++ +A+K++ R+ LTG+P+QNN++E + + DF+ GF
Sbjct: 1399 KTEYNYCVLDEGHIIKNSQSKLAKAVKEITANHRLILTGTPIQNNVLELWSLFDFLMPGF 1458
Query: 773 LGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPP 832
LG+ F+ RF PI +++ ++S++ + L++Q+ F+ R V DLPP
Sbjct: 1459 LGTEKMFQERFAKPIAASRNSKTSSKEQEAGVLALEALHKQVLPFMLRRLKEDVLSDLPP 1518
Query: 833 KTVFVITVKLSPLQRRLYKRFLDLH-GFTNDRVSNEKI---RKSFFAGYQALAQIWNHPG 888
K + +L LQ++LY F + N +I ++ F Q + ++ NHP
Sbjct: 1519 KIIQDYYCELGDLQKQLYMDFTKKQKNVVEKDIENSEIADGKQHIFQALQYMRKLCNHPA 1578
Query: 889 ILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL 948
L +P +D +D + +I + LL
Sbjct: 1579 ---LVLSPNHPQLAQVQDYLKQTGLDLHDIINAP-----------------KLSALRTLL 1618
Query: 949 HEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL 1008
E E D K + ++L+F Q LD++E L K P
Sbjct: 1619 FECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDLFKKYMPSVT--- 1675
Query: 1009 WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVD 1068
+ RLDG + +RQK+V +FNE + + C L++T+ G LG+NL A+ VI V+
Sbjct: 1676 ------YMRLDGSIDPRDRQKVVRKFNE--DPSIDCLLLTTKVGGLGLNLTGADTVIFVE 1727
Query: 1069 GSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH 1128
WNP DLQA+ RA R GQ K V YR++ GT+EEKI Q K +A+ VV++Q
Sbjct: 1728 HDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTVVNQQNSG 1787
Query: 1129 -RTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALKHKLPLSHEGCSDKLME 1187
++ ++L LF DP S++N + ++ ++ A + + G + K E
Sbjct: 1788 LASMDTHQLLDLF--------DPDNVTSQDNEEKNNGDSQAAKGMEDIANETGLTGKAKE 1839
Query: 1188 SLLGKHHPRWISNYHEHE 1205
+ LG+ W + +E E
Sbjct: 1840 A-LGELKELWDPSQYEEE 1856
>sp|A6ZL17|RDH54_YEAS7 DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain YJM789) GN=RDH54 PE=3 SV=1
Length = 924
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 172/628 (27%), Positives = 277/628 (44%), Gaps = 128/628 (20%)
Query: 566 LKAHQVVGIRFMWENIIQSIRK--------------VKSGDKGL-GCILAHTMGLGKTFQ 610
L+ HQ G++FM++ ++ R V D + GC+LA MGLGKT
Sbjct: 262 LRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLM 321
Query: 611 VIAFLYTAMRSVNLGLRTA---------------LIVTPVNVLHNWKQEFMKWRPSELKP 655
I ++T +R + + L+V PV ++ NWK+EF KW L
Sbjct: 322 SITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKW----LNL 377
Query: 656 LRVFMLEDVSR-----DRRA-ELLAKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMAREI 708
R+ +L SR D+ A K + V +IGY LS + + K++++
Sbjct: 378 SRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL--LSVSEELEKNKHLI--- 432
Query: 709 CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 768
D+LVCDE H +KN + LK + +R++ LTG+P+QN+L E++ ++DF+
Sbjct: 433 --------DMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFI 484
Query: 769 REGFLGSSHEFRNRFQNPIENGQHTNS--TSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 826
G LGS F+ RF PI + T + E ++ +RS + E K F+ R ++
Sbjct: 485 NPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAIL 544
Query: 827 KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWN 885
+K LPPKT ++ K Q +K L R+ ++ S G L ++ N
Sbjct: 545 EKYLPPKTDIILFCKPYSQQILAFKDILQ-----GARLDFGQLTFSSSLGLITLLKKVCN 599
Query: 886 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 945
PG+ +G P + K
Sbjct: 600 SPGL-----------------------------VGSDP---------------YYKSHIK 615
Query: 946 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1004
D + +Y SGK+ +L+ +L + +K +V S TLD+IE ++
Sbjct: 616 DTQSQDSYSRSLNSGKLRVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMN------- 668
Query: 1005 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1064
G RLDG + +R +V FN N + L+S ++G +G+NL A+R+
Sbjct: 669 -----MAGMSHCRLDGSIPAKQRDSIVTSFNR--NPAIFGFLLSAKSGGVGLNLVGASRL 721
Query: 1065 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1124
I+ D WNP+ DLQA+ R R GQ KP F YRL+ G ++EKI +RQ+ K L+ + +
Sbjct: 722 ILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGD 781
Query: 1125 QQVHR-------TISKEEMLHLFEFGDD 1145
++ +KE++ LF D
Sbjct: 782 SEMRNKESSNDDLFNKEDLKDLFSVHTD 809
>sp|P38086|RDH54_YEAST DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RDH54 PE=1
SV=4
Length = 958
Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 172/628 (27%), Positives = 277/628 (44%), Gaps = 128/628 (20%)
Query: 566 LKAHQVVGIRFMWENIIQSIRK--------------VKSGDKGL-GCILAHTMGLGKTFQ 610
L+ HQ G++FM++ ++ R V D + GC+LA MGLGKT
Sbjct: 296 LRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLM 355
Query: 611 VIAFLYTAMRSVNLGLRTA---------------LIVTPVNVLHNWKQEFMKWRPSELKP 655
I ++T +R + + L+V PV ++ NWK+EF KW L
Sbjct: 356 SITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKW----LNL 411
Query: 656 LRVFMLEDVSR-----DRRA-ELLAKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMAREI 708
R+ +L SR D+ A K + V +IGY LS + + K++++
Sbjct: 412 SRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL--LSVSEELEKNKHLI--- 466
Query: 709 CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 768
D+LVCDE H +KN + LK + +R++ LTG+P+QN+L E++ ++DF+
Sbjct: 467 --------DMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFI 518
Query: 769 REGFLGSSHEFRNRFQNPIENGQHTNS--TSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 826
G LGS F+ RF PI + T + E ++ +RS + E K F+ R ++
Sbjct: 519 NPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAIL 578
Query: 827 KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWN 885
+K LPPKT ++ K Q +K L R+ ++ S G L ++ N
Sbjct: 579 EKYLPPKTDIILFCKPYSQQILAFKDILQ-----GARLDFGQLTFSSSLGLITLLKKVCN 633
Query: 886 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 945
PG+ +G P + K
Sbjct: 634 SPGL-----------------------------VGSDP---------------YYKSHIK 649
Query: 946 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1004
D + +Y SGK+ +L+ +L + +K +V S TLD+IE ++
Sbjct: 650 DTQSQDSYSRSLNSGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMN------- 702
Query: 1005 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1064
G RLDG + +R +V FN N + L+S ++G +G+NL A+R+
Sbjct: 703 -----MAGMSHCRLDGSIPAKQRDSIVTSFNR--NPAIFGFLLSAKSGGVGLNLVGASRL 755
Query: 1065 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1124
I+ D WNP+ DLQA+ R R GQ KP F YRL+ G ++EKI +RQ+ K L+ + +
Sbjct: 756 ILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGD 815
Query: 1125 QQVHR-------TISKEEMLHLFEFGDD 1145
++ +KE++ LF D
Sbjct: 816 SEMRNKESSNDDLFNKEDLKDLFSVHTD 843
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 172/585 (29%), Positives = 261/585 (44%), Gaps = 102/585 (17%)
Query: 546 NVVREKGEEAVRIPSS-ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 604
NV E+ + PS + LK +Q+ G+++M V + L ILA MG
Sbjct: 746 NVAHRIKEDIKKQPSILVGGTLKDYQIKGLQWM----------VSLFNNHLNGILADEMG 795
Query: 605 LGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV 664
LGKT Q I+ L N+ L++ P++ L NW EF KW P+ LR +
Sbjct: 796 LGKTIQTISLLTYLYEMKNIR-GPYLVIVPLSTLSNWSSEFAKWAPT----LRTISFKGS 850
Query: 665 SRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI--CHALQDGPDILVCD 722
+R+A+ AK RA G F + T F + +K+R + ++ H ++ D
Sbjct: 851 PNERKAKQ-AKIRA--GEFDVVLTTFEYI-----IKERALLSKVKWVH--------MIID 894
Query: 723 EAHMIKNTRADTTQALK-QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 781
E H +KN ++ + L R+ LTG+PLQNNL E + +++FV S F
Sbjct: 895 EGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDE 954
Query: 782 RFQNPIEN--GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVIT 839
F P N GQ SE+ ++ R L++ L+ F+ R V+K+LP K V+
Sbjct: 955 WFNTPFANTGGQDKIELSEEETLLVIRR--LHKVLRPFLLRRLKKDVEKELPDKVEKVVK 1012
Query: 840 VKLSPLQRRLYKRFLDLHGFTNDRVSNEKI--RKSFFAGYQALAQIWNHPGILQLTKDKG 897
K+S LQ+ +Y++ L +N+K+ + F L +I NHP + + +D+
Sbjct: 1013 CKMSALQQIMYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQI 1072
Query: 898 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 957
P+RE ND D W
Sbjct: 1073 NPTRE-----------------------TND-------------DIWR------------ 1084
Query: 958 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1017
+GK LL IL G + L+F Q +D++E +L + + R
Sbjct: 1085 VAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYI------------NIKYLR 1132
Query: 1018 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1077
LDG T+S ER +L+ FN P + C ++STRAG LG+NL +A+ VII D WNP DL
Sbjct: 1133 LDGHTKSDERSELLRLFNAP-DSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDL 1191
Query: 1078 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1122
QA RA R GQ V RL+ ++EE I +R K + +V+
Sbjct: 1192 QAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVI 1236
>sp|B5VE38|RDH54_YEAS6 DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain AWRI1631) GN=RDH54 PE=3 SV=1
Length = 924
Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 172/628 (27%), Positives = 277/628 (44%), Gaps = 128/628 (20%)
Query: 566 LKAHQVVGIRFMWENIIQSIRK--------------VKSGDKGL-GCILAHTMGLGKTFQ 610
L+ HQ G++FM++ ++ R V D + GC+LA MGLGKT
Sbjct: 262 LRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLM 321
Query: 611 VIAFLYTAMRSVNLGLRTA---------------LIVTPVNVLHNWKQEFMKWRPSELKP 655
I ++T +R + + L+V PV ++ NWK+EF KW L
Sbjct: 322 SITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKW----LNL 377
Query: 656 LRVFMLEDVSR-----DRRA-ELLAKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMAREI 708
R+ +L SR D+ A K + V +IGY LS + + K++++
Sbjct: 378 SRIGVLTLSSRNSPDMDKMAVRNFLKVQRIYQVLIIGYEKL--LSVSEELEKNKHLI--- 432
Query: 709 CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 768
D+LVCDE H +KN + LK + +R++ LTG+P+QN+L E++ ++DF+
Sbjct: 433 --------DMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFI 484
Query: 769 REGFLGSSHEFRNRFQNPIENGQHTNS--TSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 826
G LGS F+ RF PI + T + E ++ +RS + E K F+ R ++
Sbjct: 485 NPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAIL 544
Query: 827 KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWN 885
+K LPPKT ++ K Q +K L R+ ++ S G L ++ N
Sbjct: 545 EKYLPPKTDIILFCKPYSQQILAFKDILQ-----GARLDFGQLTFSSSLGLITLLKKVCN 599
Query: 886 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 945
PG+ +G P + K
Sbjct: 600 SPGL-----------------------------VGSDP---------------YYKSHIK 615
Query: 946 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1004
D + +Y SGK+ +L+ +L + +K +V S TLD+IE ++
Sbjct: 616 DTQSQDSYSRSLNSGKLRVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMN------- 668
Query: 1005 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1064
G RLDG + +R +V FN N + L+S ++G +G+NL A+R+
Sbjct: 669 -----MAGMSHCRLDGSIPAKQRDSIVTSFNR--NPAIFGFLLSAKSGGVGLNLVGASRL 721
Query: 1065 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1124
I+ D WNP+ DLQA+ R R GQ KP F YRL+ G ++EKI +RQ+ K L+ + +
Sbjct: 722 ILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGD 781
Query: 1125 QQVHR-------TISKEEMLHLFEFGDD 1145
++ +KE++ LF D
Sbjct: 782 SEMRNKESSNDDLFNKEDLKDLFSVHTD 809
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus GN=Smarca5
PE=1 SV=1
Length = 1051
Score = 199 bits (507), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 177/591 (29%), Positives = 273/591 (46%), Gaps = 111/591 (18%)
Query: 559 PSSIS-AKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 617
PS + KL+ +QV G+ ++ + + G+ ILA MGLGKT Q I+ L
Sbjct: 171 PSYVKWGKLRDYQVRGLNWL----------ISLYENGINGILADEMGLGKTLQTISLLGY 220
Query: 618 AMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLR-VFMLEDVSRDRRAELLAKW 676
N+ +++ P + LHNW EF KW P+ LR V ++ D +++RA +
Sbjct: 221 MKHYRNIP-GPHMVLVPKSTLHNWMSEFKKWVPT----LRSVCLIGD--KEQRAAFVR-- 271
Query: 677 RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 736
V L G S+ +K++++ ++ LV DEAH IKN ++ ++
Sbjct: 272 ----DVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRY------LVIDEAHRIKNEKSKLSE 321
Query: 737 ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 796
+++ K R+ LTG+PLQNNL E + +++F+ S+ +F + F TN+
Sbjct: 322 IVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFD--------TNNC 373
Query: 797 SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 856
D K++ +R H++ L+ F+ R V+K LPPK I V LS +QR Y R L
Sbjct: 374 LGDQKLV-ERLHMV---LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL-- 427
Query: 857 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYN 916
+ + I S AG ++ N ++QL K +P D + D +
Sbjct: 428 -------MKDIDILNS--AGKMDKMRLLNI--LMQLRKCCNHPYLFDGAEPGPPYTTDMH 476
Query: 917 VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMG 976
+V SGKMV+L +L G
Sbjct: 477 LVTN--------------------------------------SGKMVVLDKLLPKLKEQG 498
Query: 977 DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNE 1036
+ L+FSQ LD++E Y +W+ ++ RLDG+T ERQ + +NE
Sbjct: 499 SRVLIFSQMTRVLDILEDYC-----------MWR-NYEYCRLDGQTPHDERQDSINAYNE 546
Query: 1037 PLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYR 1096
P N ++STRAG LGINL +A+ VI+ D WNP DLQA+ RA R GQTK V +R
Sbjct: 547 P-NSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 605
Query: 1097 LMAHGTMEEKIYKRQVTKEGLAARVVDR----QQVHRTISKEEMLHLFEFG 1143
+ T+EE+I +R K L + V+ + Q I K+EML + G
Sbjct: 606 FITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHG 656
>sp|Q9U7E0|ATRX_CAEEL Transcriptional regulator ATRX homolog OS=Caenorhabditis elegans
GN=xnp-1 PE=1 SV=1
Length = 1359
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 169/298 (56%), Gaps = 38/298 (12%)
Query: 947 LLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK-- 1004
L+ E + S K++LL++I+ C +GDK LVFSQS+ +L LI+ L + G+
Sbjct: 934 LVKEEDRDDFALSNKLILLVEIIKKCEEIGDKLLVFSQSLESLTLIKRMLEYMAGTGQWF 993
Query: 1005 ---------QGK---LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 1052
+G+ W +G+D+ +DG +S +R + FN+PLN R + LISTRAG
Sbjct: 994 ADGHEALNAEGEETWSWLEGEDYMTIDGSVQSGKRDAVQTSFNDPLNLRARLMLISTRAG 1053
Query: 1053 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1112
SLG N+ +ANRVII D WNP++D Q+++R +R+GQTKPV+ YR +A GTMEE+IYKRQV
Sbjct: 1054 SLGTNMVAANRVIIFDACWNPSHDTQSLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQV 1113
Query: 1113 TKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALKH 1172
TKE + RVVD Q+ R ++ L++F DP +S CA
Sbjct: 1114 TKESTSMRVVDEAQIQRHYLGNDLTELYQFT-PSTFDPDVEIS------------CA--- 1157
Query: 1173 KLPLSHEGCSDKLMESLLGKHHPRWISNYHEHETLLQENEEERLSKEEQDMAWEVFRK 1230
D+L+ ++ K+ + +Y EH+TL E+E+L+++E AW + K
Sbjct: 1158 -------PPKDRLLADVIHKNQ-HAVVDYIEHDTLFANVEDEKLTEQEMKDAWTDYEK 1207
Score = 187 bits (476), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 150/480 (31%), Positives = 225/480 (46%), Gaps = 89/480 (18%)
Query: 480 ILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDA 539
I+D ++L +ET EKER++RL+ Q +F+ L L L+ +S L
Sbjct: 378 IMDSSKLQKETIDAERAEKERRKRLEKKQKEFNGIV-LEEGEDLTEMLTGTSSQRKLKSV 436
Query: 540 ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 599
+ + V E+ ++ V + +S+ LK HQ GI+FM++ +S+ ++ + +G G IL
Sbjct: 437 VLDPDSSTVDEESKKPVEVHNSLVRILKPHQAHGIQFMYDCACESLDRLDT--EGSGGIL 494
Query: 600 AHTMGLGKTFQVIAFLYTAMRSVNLG--LRTALIVTPVNVLHNWKQEFMKW---RPSELK 654
AH MGLGKT QVI FL+T + +G + L+V P NV+ NW +EF KW EL
Sbjct: 495 AHCMGLGKTLQVITFLHTVLMHEKIGEKCKRVLVVVPKNVIINWFKEFQKWLVDNDEELD 554
Query: 655 PLRVFMLEDVS--RDRRAELLAKWRAKG-GVFLIGYTAFRNLSFGKHVKD---------- 701
+ V L+ DRR L A +K V +IGY FR L+ K
Sbjct: 555 TIDVNELDSYKTIEDRRRALKAWHSSKTPSVMIIGYDLFRILTVEDDPKKKKPKNRNRRL 614
Query: 702 RNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLME 760
+ LQ+ GPD++VCDEAH +KN + ++ + ++ +RRI LTG+PLQNNLME
Sbjct: 615 EKAKEDFRKYLQNPGPDMVVCDEAHKLKNDDSALSKCMVKILTKRRICLTGTPLQNNLME 674
Query: 761 YYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHIL---------- 810
Y+CMV+FV+ G LG+ EF NRF N I G+ +++ +V M +R H+L
Sbjct: 675 YHCMVNFVKPGLLGTKTEFANRFVNIINRGRTKDASPLEVSFMKRRCHVLYDHLKKCVDR 734
Query: 811 -------------------YEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 851
V+ + Q LY
Sbjct: 735 KDYRVLTEAIPPKQEYVIN-----------------------------VRQTERQCALYN 765
Query: 852 RFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK---DKGYPSREDAEDSS 908
FL ND V + + K Y ++IW HP L L + ++ REDAE+ +
Sbjct: 766 AFL------NDIVGDSGLSKRLLPDYHMFSRIWTHPYQLVLHEQRMERERVMREDAEEEA 819
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens GN=SMARCA5
PE=1 SV=1
Length = 1052
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 176/591 (29%), Positives = 273/591 (46%), Gaps = 111/591 (18%)
Query: 559 PSSIS-AKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 617
PS + KL+ +QV G+ ++ + + G+ ILA MGLGKT Q I+ L
Sbjct: 172 PSYVKWGKLRDYQVRGLNWL----------ISLYENGINGILADEMGLGKTLQTISLLGY 221
Query: 618 AMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLR-VFMLEDVSRDRRAELLAKW 676
N+ +++ P + LHNW EF +W P+ LR V ++ D +++RA +
Sbjct: 222 MKHYRNIP-GPHMVLVPKSTLHNWMSEFKRWVPT----LRSVCLIGD--KEQRAAFVR-- 272
Query: 677 RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 736
V L G S+ +K++++ ++ LV DEAH IKN ++ ++
Sbjct: 273 ----DVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRY------LVIDEAHRIKNEKSKLSE 322
Query: 737 ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 796
+++ K R+ LTG+PLQNNL E + +++F+ S+ +F + F TN+
Sbjct: 323 IVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFD--------TNNC 374
Query: 797 SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 856
D K++ +R H++ L+ F+ R V+K LPPK I V LS +QR Y R L
Sbjct: 375 LGDQKLV-ERLHMV---LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL-- 428
Query: 857 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYN 916
+ + I S AG ++ N ++QL K +P D + D +
Sbjct: 429 -------MKDIDILNS--AGKMDKMRLLNI--LMQLRKCCNHPYLFDGAEPGPPYTTDMH 477
Query: 917 VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMG 976
+V SGKMV+L +L G
Sbjct: 478 LVTN--------------------------------------SGKMVVLDKLLPKLKEQG 499
Query: 977 DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNE 1036
+ L+FSQ LD++E Y +W+ ++ RLDG+T ERQ + +NE
Sbjct: 500 SRVLIFSQMTRVLDILEDYC-----------MWR-NYEYCRLDGQTPHDERQDSINAYNE 547
Query: 1037 PLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYR 1096
P N ++STRAG LGINL +A+ VI+ D WNP DLQA+ RA R GQTK V +R
Sbjct: 548 P-NSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 606
Query: 1097 LMAHGTMEEKIYKRQVTKEGLAARVVDR----QQVHRTISKEEMLHLFEFG 1143
+ T+EE+I +R K L + V+ + Q I K+EML + G
Sbjct: 607 FITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHG 657
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1 SV=1
Length = 1120
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 164/594 (27%), Positives = 270/594 (45%), Gaps = 114/594 (19%)
Query: 559 PSSI-SAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 617
PS + S KL+ +QV G+ ++ + + L ILA MGLGKT Q I+FL
Sbjct: 176 PSFVKSGKLRDYQVQGLNWL----------ISLHENKLSGILADEMGLGKTLQTISFL-G 224
Query: 618 AMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAK-- 675
+R V LI+ P + L NW++EF+KW P+ + V +L +D RA+++
Sbjct: 225 YLRYVKQIEGPFLIIVPKSTLDNWRREFLKWTPN----VNVLVLHG-DKDTRADIVRNII 279
Query: 676 WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 735
A+ V + Y ++++N + + +V DEAH IKN ++ +
Sbjct: 280 LEARFDVLITSYEMV--------IREKNALKRLAWQY------IVIDEAHRIKNEQSALS 325
Query: 736 QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 795
Q ++ + R+ +TG+PLQNNL E + +++F+ G S F F+ N+
Sbjct: 326 QIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQ--------NN 377
Query: 796 TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL- 854
+ +D +I+ Q+ H + L F+ R V+K L PK + V ++ +Q + YK L
Sbjct: 378 SEQDQEIVIQQLHSV---LNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLE 434
Query: 855 -DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 913
D+ N V + + L + NHP + + E ++DE++
Sbjct: 435 KDIDA-VNGAVGKREGKTRLLNIVMQLRKCCNHPYLFE--------GAEPGPPYTTDEHL 485
Query: 914 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCS 973
+N SGKM++L +L
Sbjct: 486 IFN------------------------------------------SGKMIILDKLLKRLK 503
Query: 974 NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVER 1033
G + L+FSQ LD++E Y + + ++ R+DG T ER + ++
Sbjct: 504 EKGSRVLIFSQMSRLLDILEDYC------------YFRDFEYCRIDGSTSHEERIEAIDE 551
Query: 1034 FNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVF 1093
+N+P N L++TRAG LGINL +A+ VI+ D WNP DLQA+ RA R GQ K V
Sbjct: 552 YNKP-NSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVH 610
Query: 1094 AYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTI----SKEEMLHLFEFG 1143
YR + +EEK+ +R K L V+ + +T SK+++L + +FG
Sbjct: 611 VYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGNSKDDLLDMIQFG 664
>sp|O43065|MOT1_SCHPO Probable helicase mot1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mot1 PE=1 SV=4
Length = 1953
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 173/623 (27%), Positives = 274/623 (43%), Gaps = 102/623 (16%)
Query: 554 EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA 613
EA IP ISA L+ +Q G+ N + + K + L IL MGLGKT Q I
Sbjct: 1346 EAFSIPVPISADLRKYQQEGV-----NWLAFLNKYE-----LHGILCDDMGLGKTLQTIC 1395
Query: 614 F----------LYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 663
L+ S +LIV P + +W+QE + P L+V
Sbjct: 1396 IVASDHYNRQKLFEESGSPKFAHVPSLIVCPSTLAGHWQQELSTYAPF----LKVSAYVG 1451
Query: 664 VSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDE 723
+R A++ +K + K V + Y RN ++ ++ + V DE
Sbjct: 1452 PPAER-AKIRSKMK-KSDVVVTSYDICRN--------------DVDELVKIDWNYCVLDE 1495
Query: 724 AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 783
H+IKN RA T+A+K ++ R+ L+G+P+QNN++E + + DF+ GFLG+ F+ RF
Sbjct: 1496 GHVIKNARAKLTKAVKSLRSYHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKTFQERF 1555
Query: 784 QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 843
PI + S+S++ + +++Q+ F+ R V DLPPK + +S
Sbjct: 1556 VRPIAASRDAKSSSKERERGTLALEAIHKQVLPFMLRRLKEDVLADLPPKIIQDYYCDMS 1615
Query: 844 PLQRRLYKRFL-------DLHGFTNDRVSNEKIRKS----FFAGYQALAQIWNHPGILQL 892
LQR+L F+ +L ++ + +KS F Q + ++ NHP ++
Sbjct: 1616 DLQRKLLNDFVSQLNINEELEDDETEKTQGTRKKKSQKAHIFQALQYMRKLCNHPALILT 1675
Query: 893 TKDKGYPSREDAEDSSSDENMDYN--------VVIGEKPRNMNDFLQGKNDDGFFQKDWW 944
K +P R + EN + +G+ R+ N +G
Sbjct: 1676 EK---HPKRNAIVKQLAKENSGLHDLKHAPKLTALGQLLRDCGLGNSSVNSNGI--DSAL 1730
Query: 945 NDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1004
+ + EH + L+F Q LD++E L + P
Sbjct: 1731 TNAVSEH--------------------------RVLIFCQLKDMLDMVEKDLLQATMPDV 1764
Query: 1005 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1064
+ RLDG E ++RQ+ V +FN + + L++T G LG+NL A+ V
Sbjct: 1765 T---------YMRLDGSVEPTKRQEAVTKFNN--DPSIDVLLLTTHVGGLGLNLTGADTV 1813
Query: 1065 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1124
I V+ WNP DLQA+ RA R GQ K V YRL+ G +EEKI Q K +A+ VV++
Sbjct: 1814 IFVEHDWNPMRDLQAMDRAHRIGQKKVVNVYRLITRGCLEEKIMGLQRFKMNVASTVVNQ 1873
Query: 1125 QQVH-RTISKEEMLHLFEFGDDE 1146
Q +I +++L LF DE
Sbjct: 1874 QNAGLSSIGTDQILDLFNTTADE 1896
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 190 bits (483), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 170/568 (29%), Positives = 252/568 (44%), Gaps = 102/568 (17%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 621
+ KLK +Q+ G+++M + + L ILA MGLGKT Q I+ L T +
Sbjct: 413 VGGKLKEYQLRGLQWM----------ISLYNNHLNGILADEMGLGKTIQTIS-LITHLIE 461
Query: 622 VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG 681
L++ P++ L NW EF +W PS +K + + + R+A +
Sbjct: 462 KKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVK----IVYKGPPQVRKALHPQVRHSNFQ 517
Query: 682 VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQV 741
V L Y +KDR + I ++ DE H +KNT++ T L
Sbjct: 518 VLLTTYEYI--------IKDRPLLSRIKWI------YMIIDEGHRMKNTQSKLTNTLTTY 563
Query: 742 KCQR-RIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN--GQHTNSTSE 798
R R+ LTG+PLQNNL E + +++FV S F F P N GQ +E
Sbjct: 564 YSSRYRLILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTE 623
Query: 799 DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 858
+ ++ R L++ L+ F+ R V+ +LP K VI ++S LQ++LY + + HG
Sbjct: 624 EESLLVIRR--LHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQ-MKKHG 680
Query: 859 FTNDRVSNEKIRKSFFAGYQ----ALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 914
V + K K+ G Q L +I NHP + ED E S +
Sbjct: 681 MLY--VEDAKRGKTGIKGLQNTVMQLKKICNHPFVF-----------EDVERSIDPTGFN 727
Query: 915 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN 974
Y+++ W SGK LL IL
Sbjct: 728 YDML-------------------------WR------------VSGKFELLDRILPKLFR 750
Query: 975 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERF 1034
G + L+F Q ++++E YL + W+ + RLDG T++ +R KL+ F
Sbjct: 751 SGHRILMFFQMTQIMNIMEDYL--------HYRQWR----YLRLDGSTKADDRSKLLGVF 798
Query: 1035 NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFA 1094
N+P V L+STRAG LG+NL +A+ VII D WNP DLQA RA R GQTK V
Sbjct: 799 NDP-TAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRI 857
Query: 1095 YRLMAHGTMEEKIYKRQVTKEGLAARVV 1122
YRL+ ++EE I R K + +V+
Sbjct: 858 YRLITEKSVEENILARAQYKLDIDGKVI 885
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 492,150,863
Number of Sequences: 539616
Number of extensions: 21396036
Number of successful extensions: 77066
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 243
Number of HSP's successfully gapped in prelim test: 255
Number of HSP's that attempted gapping in prelim test: 74295
Number of HSP's gapped (non-prelim): 2026
length of query: 1321
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1191
effective length of database: 121,419,379
effective search space: 144610480389
effective search space used: 144610480389
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)