Your job contains 1 sequence.
>000744
MAGNYRFAMDQKDIVRLMITSVGSFIQDRLINQEERTQHKEQCAERLAAEDGSNDKDSEF
RYSDQAVLANLDWGIEALEEAINTSNMETKLARLDYAEKMLQVCAMLDSDQQTAGVPNFY
LSAWAHLNLSYLWKLRNNVQNSVLHALEMFSIDPFFSRIDFAPELWKELFLPQMSSIVGW
YSEARHRLVMEAIPDSSDLSFTADLDQFFNESLIFSMRPEQVEKLQQLEQLYGDSLDENT
RMFAKYYKDCMNSDSSTRTKVIPMLPIAEPPATPLHEFSRSIPDYVKFGPVLPKSAGFSA
VLKSKSNMRGPSSPCNESDEGSQSCNSLPCSEKMTSRSRPPKDFVCPITGQIFNDPVTLE
TGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVLKRLITSWKEQYPDLAQEFSY
SETPKHSFGSSPLKDMTLASSPSRTFNFHIHNNTDDHINERRKRFTQAANATSPTSVISQ
ASVETIINGLKPYVTCLCTSENLQECETAVLAIARLWKESKGDPGVHAYLLKPTIINGFA
EILSASLSREVLRTSVYILSELMVADESVGDILTSVDSDFDCLAALLKNGLGEAAVLIYQ
LRPAFAQLSAHEFIPSLVQLVLNKTEEFDELQFVMEPKDAAIEMLEQILMGGDKKSRSIT
ALSLISANGIPALIKCLDRVEVRRSIVSILLCCMHADKSCKTLIAKRIELSHVLDLFHDG
NDSVRGICINFLSELVLLNRRTFSNQILQVIRDEGSFSTMHTFLVYLQMAPMEQQPATAS
LLLQLDLLVEPRKMSMYREEAVEALIEALRRKDFPNSQMMALDALLSLTGRFTFSGKSYT
EALLLKIAGFDQPYNALMKPERLSKPESEMVESMEEEEQAACSWEKRVAFVLCNHEKGSI
FKALEECLKSNSLEMAKSCLVIAAWLTHMLSTLPDTGVRGTARRSLLDEFINVLQSSRNL
EEKILTALALKTFISDPVALEELGKYAKCIYGTLRKLKKYSAVVTDIQKALMNLSSVNAT
ELWHCNEVTELDSSTNGEVLSLIHLKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRA
VTCLYVPSSGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHELTANAEIACFVSPA
TGVKVYNWSGAIKHINFNKHVKSLVMTGDKLYCGCSGYSIQEVDLGNLTSTTFYAGTKKL
LGKQTIHSLHMHNGLLFAGGSSVDGTAGKVFSISSKTAVGSFTTGIDIQHLAVNSDFIFT
ATKCGTIEVWLKERVTRVASVKANNSGGGHAKITCLGTGVDGHPYK
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000744
(1306 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 218 4.0e-17 2
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 219 5.8e-14 1
DICTYBASE|DDB_G0286735 - symbol:DDB_G0286735 "C3HC4-type ... 171 6.0e-13 2
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 197 4.5e-12 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 197 1.1e-11 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 195 3.0e-11 2
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 190 5.8e-11 1
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 189 7.5e-11 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 188 1.2e-10 1
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 184 1.2e-10 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 183 1.8e-10 2
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 185 2.2e-10 2
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 177 5.4e-10 1
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 166 6.7e-10 2
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 152 7.1e-10 2
DICTYBASE|DDB_G0290687 - symbol:mhkC "myosin heavy chain ... 173 1.3e-09 2
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 161 2.3e-09 2
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 160 3.1e-09 2
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 175 3.5e-09 1
POMBASE|SPAC57A10.05c - symbol:pof1 "F-box/WD repeat prot... 172 5.1e-09 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 151 6.7e-09 3
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 151 8.2e-09 3
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 167 9.8e-09 2
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 166 1.1e-08 1
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 166 2.4e-08 2
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 154 2.5e-08 2
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 156 1.4e-07 1
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 154 1.6e-07 2
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 159 1.7e-07 1
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 170 2.0e-07 2
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 158 2.6e-07 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 152 3.0e-07 2
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 156 3.1e-07 2
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 148 3.7e-07 2
TAIR|locus:2173103 - symbol:AT5G51980 species:3702 "Arabi... 150 7.2e-07 1
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 149 1.3e-06 2
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 145 4.4e-06 1
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 144 5.1e-06 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 144 5.7e-06 1
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 146 6.2e-06 3
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 141 6.7e-06 1
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 142 6.7e-06 2
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 145 6.8e-06 2
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 155 8.9e-06 2
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 137 8.9e-06 1
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 149 1.1e-05 4
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 139 1.3e-05 1
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 148 1.4e-05 4
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 137 1.6e-05 2
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 137 1.6e-05 2
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 150 1.7e-05 2
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 161 1.8e-05 3
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 144 2.0e-05 2
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 144 2.1e-05 2
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 140 2.2e-05 1
TAIR|locus:2131799 - symbol:ZFWD1 "zinc finger WD40 repea... 136 2.3e-05 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 136 2.7e-05 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 135 3.5e-05 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 135 3.5e-05 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 135 3.5e-05 1
RGD|1310215 - symbol:Taf5l "TAF5-like RNA polymerase II, ... 111 4.3e-05 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 134 4.5e-05 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 134 5.1e-05 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 138 6.3e-05 2
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 132 6.6e-05 1
TAIR|locus:2010157 - symbol:AT1G49450 "AT1G49450" species... 119 6.8e-05 2
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 132 7.4e-05 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 141 9.4e-05 2
DICTYBASE|DDB_G0283581 - symbol:utp15 "U3 snoRNP protein"... 131 0.00011 1
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 133 0.00012 1
TAIR|locus:2164456 - symbol:AT5G40880 species:3702 "Arabi... 130 0.00012 1
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 128 0.00013 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 131 0.00013 1
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 135 0.00015 2
TAIR|locus:2170061 - symbol:AT5G50120 "AT5G50120" species... 127 0.00018 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 126 0.00020 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 126 0.00020 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 126 0.00020 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 126 0.00020 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 126 0.00020 1
ASPGD|ASPL0000008575 - symbol:AN6217 species:162425 "Emer... 129 0.00023 1
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 126 0.00026 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 125 0.00026 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 126 0.00027 1
ZFIN|ZDB-GENE-050208-677 - symbol:si:dkey-42p8.3 "si:dkey... 129 0.00031 1
UNIPROTKB|H0YNI7 - symbol:TLE3 "Transducin-like enhancer ... 124 0.00033 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 124 0.00038 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 125 0.00044 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 141 0.00046 2
UNIPROTKB|F6XII0 - symbol:UTP15 "Uncharacterized protein"... 125 0.00048 1
UNIPROTKB|E2QVD0 - symbol:UTP15 "Uncharacterized protein"... 125 0.00048 1
TAIR|locus:2085929 - symbol:AT3G18950 "AT3G18950" species... 110 0.00062 2
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 136 0.00063 2
UNIPROTKB|F1PH16 - symbol:TLE1 "Uncharacterized protein" ... 125 0.00075 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 122 0.00078 1
UNIPROTKB|Q04724 - symbol:TLE1 "Transducin-like enhancer ... 125 0.00083 1
UNIPROTKB|F1SIJ5 - symbol:TLE1 "Uncharacterized protein" ... 125 0.00083 1
MGI|MGI:104636 - symbol:Tle1 "transducin-like enhancer of... 125 0.00083 1
UNIPROTKB|F1MH28 - symbol:TLE1 "Uncharacterized protein" ... 125 0.00083 1
UNIPROTKB|F1NDB6 - symbol:Gga.54931 "Uncharacterized prot... 124 0.00084 1
WARNING: Descriptions of 8 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 218 (81.8 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 107/373 (28%), Positives = 165/373 (44%)
Query: 239 NTRMFAKYYKDCMNSDSSTRTKVIPMLPIAEPPATPLHEFSRSIPDYVKFGPVLP-KSAG 297
N++ F+ + M D+S+ KVI L P T +H S+ D KF P KS+
Sbjct: 156 NSKKFSSGLSEPMEKDASSNRKVIEKLESI--PET-VH----SLSDEKKFESPPPWKSSS 208
Query: 298 FS-AVLKSKS--NMRGPSSPCNESDEGSQSCNSLPCSEKMTSRSRPPKDFVCPITGQIFN 354
S A SK + R + SD+ SQ S+ +T P+DF+CPI+ ++
Sbjct: 209 VSLAFFLSKDGDDERLEKAVTENSDD-SQK------SDNLTI----PEDFLCPISLELMK 257
Query: 355 DPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVLKRLITSWKEQYPDL 414
DP + TGQTYER IQ W+ GN +CP T+Q L N NYVL+ LI+ W ++ ++
Sbjct: 258 DPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKL-ENFTLTPNYVLRSLISQWCTKH-NI 315
Query: 415 AQEFSYSE-TPKHSFGSSPLKDMTLASSPSRTFNFHIHNNTDDHINERRKRFTQAANATS 473
Q Y K+S GS +D++ S R + + + I +RR ++ + S
Sbjct: 316 EQPGGYMNGRTKNSDGS--FRDLSGDMSAIRALVCKLSSQS---IEDRRTAVSEI-RSLS 369
Query: 474 PTSVISQASVETIINGLKPYVTCLCTSENLQEC-ETAVLAIARLWKESKGDPGVHAYLLK 532
S ++ + G P + L TS+ E E AV I L S + +L
Sbjct: 370 KRSTDNRILIAEA--GAIPVLVKLLTSDGDTETQENAVTCILNL---SIYEHNKELIMLA 424
Query: 533 PTIINGFAEILSASLSREVLRTSVYILSELMVADESVGDILTSVDSDFDCLAALLK---- 588
+ + +L A S E + L L +ADE+ I+ L LL+
Sbjct: 425 GAVTS-IVLVLRAG-SMEARENAAATLFSLSLADEN--KIIIGASGAIMALVDLLQYGSV 480
Query: 589 NGLGEAAVLIYQL 601
G +AA ++ L
Sbjct: 481 RGKKDAATALFNL 493
Score = 81 (33.6 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 25/88 (28%), Positives = 41/88 (46%)
Query: 656 SRSITALSLISANGIPALIKCL--DRVEVRRSIVSILLCCMHADKSCKTLIAKRIELSHV 713
S + +++ AN IP LI CL D+ R + +ILLC D I + + +
Sbjct: 537 SNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPL 596
Query: 714 LDLFHDGNDSVRGICINFLSELVLLNRR 741
++L DG + + N L EL+ + R
Sbjct: 597 MELSRDGTERAKRKA-NSLLELLRKSSR 623
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 219 (82.2 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 74/265 (27%), Positives = 115/265 (43%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
PKDFVCPI+ + DPV + TGQTY+R +I W++ G+ TCP T Q L + + N L
Sbjct: 306 PKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVP-NRAL 364
Query: 401 KRLITSWKEQYPDLAQEFSYSETPKHSFGSSPLKDMTLASSPSRTFNFHIHNNTDDHINE 460
K LI W ++ E ++++P SF S+ L + T + I D
Sbjct: 365 KNLIVQWCTA-SGISYESEFTDSPNESFASA-LPTKAAVEANKATVSILIKYLADGS-QA 421
Query: 461 RRKRFTQAANATSPTSVISQASVETIINGLKPYVTCLCTSENLQECETAVLAIARLWKES 520
+ + + T ++A + G P++ L TSEN E +V A+ L
Sbjct: 422 AQTVAAREIRLLAKTGKENRAYIAEA--GAIPHLCRLLTSENAIAQENSVTAMLNLSIYE 479
Query: 521 KGDPGVHAYLLKPTIINGFAEILSASLSREVLRTSVYILSELMVADESVGDILTSVDSDF 580
K + + + + +L + L+ E + L L E I VD
Sbjct: 480 KNKSRI---MEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAI-VDQCV 535
Query: 581 DCLAALLKNGL--G--EAAVLIYQL 601
+ LA LL+NG G +A +Y L
Sbjct: 536 EALALLLQNGTPRGKKDAVTALYNL 560
>DICTYBASE|DDB_G0286735 [details] [associations]
symbol:DDB_G0286735 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 dictyBase:DDB_G0286735 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000089
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 KO:K10646
RefSeq:XP_637649.1 ProteinModelPortal:Q54LB2
EnsemblProtists:DDB0187121 GeneID:8625789 KEGG:ddi:DDB_G0286735
InParanoid:Q54LB2 OMA:NTNIMIC ProtClustDB:CLSZ2430092
Uniprot:Q54LB2
Length = 694
Score = 171 (65.3 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 68/240 (28%), Positives = 109/240 (45%)
Query: 1036 NGEVLSLIHLKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYS 1095
NG + + G ++S SD +K+WD L+ Q + H V L V G++L+S
Sbjct: 432 NGPIWCMTVTNGMLISGSSDMKVKIWDLV--TLKCKQVLSGHEGIVHTLAV--IGNRLFS 487
Query: 1096 GSLDKTIRVWSIKPEEIHCLQVHNVKEAVHELTANAEIACFVSPATGVKVYNWSG--AIK 1153
GS D+TIRVW + E CL V V L A F +KV++ ++
Sbjct: 488 GSSDQTIRVWDL--ETFECLSVLRDDNTVCALVIAAGYL-FSGSFQHIKVWDLETFECVQ 544
Query: 1154 HINFNKH-VKSLVMTGDKLYCGCSGYSIQEV-DLGNLTSTTFYAGTKKLLGKQTIHSLHM 1211
+ N H V++L ++G LY G Y++ V DL N G G +I+SL +
Sbjct: 545 TLKGNSHWVRALTVSGGYLYSGA--YNVVRVWDLANFECVQTIPG-----GSGSIYSLAV 597
Query: 1212 HNGLLFAGGSSVDGTAGKVFSISSKTAVGSFTTGID-IQHLAVNSDFIFTATKCGTIEVW 1270
N L AG + + T V+++ + + I + LAV+ ++ + TI+VW
Sbjct: 598 SNRRLLAG--TYENTI-VVWNLDTFEIINKLEGHIGAVYTLAVSDKKFYSGSYDSTIKVW 654
Score = 110 (43.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 46/201 (22%), Positives = 88/201 (43%)
Query: 949 EFINVLQSSRNLEEKILTALALKTFISDPVALEELGKYAKCIYGTLRKLKKYSAVVTDIQ 1008
E ++VL+ + ++ A L + + + +L + +C+ TL+ + +T +
Sbjct: 503 ECLSVLRDDNTVCALVIAAGYLFSGSFQHIKVWDLETF-ECVQ-TLKGNSHWVRALT-VS 559
Query: 1009 KALMNLSSVNATELWH-CN-EVTELDSSTNGEVLSLIHLKGRVLSSHSDGTIKMWDSGKR 1066
+ + N +W N E + +G + SL R+L+ + TI +W+
Sbjct: 560 GGYLYSGAYNVVRVWDLANFECVQTIPGGSGSIYSLAVSNRRLLAGTYENTIVVWNLD-- 617
Query: 1067 VLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVK-EAVH 1125
+I ++ H AV L V S K YSGS D TI+VW+ + + C+Q N +V
Sbjct: 618 TFEIINKLEGHIGAVYTLAV--SDKKFYSGSYDSTIKVWN---DSLVCVQTLNRHTSSVE 672
Query: 1126 ELTANAEIACFVSPATGVKVY 1146
+ ++ S +KV+
Sbjct: 673 SIVVSSGCVFSGSADNSIKVW 693
Score = 98 (39.6 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 61/252 (24%), Positives = 111/252 (44%)
Query: 1025 CNEVTELDSSTNGEVLSLIHLKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCL 1084
C +V S G V +L + R+ S SD TI++WD + +R+ C
Sbjct: 464 CKQVL---SGHEGIVHTLAVIGNRLFSGSSDQTIRVWDL--ETFECLSVLRDDN--TVCA 516
Query: 1085 YVPSSGDKLYSGSLDKTIRVWSIKPEEIHCLQ-VHNVKEAVHELTANAEIACFVSPATGV 1143
V ++G L+SGS I+VW + E C+Q + V LT + + V
Sbjct: 517 LVIAAG-YLFSGSFQH-IKVWDL--ETFECVQTLKGNSHWVRALTVSGGYL-YSGAYNVV 571
Query: 1144 KVYNWSG--AIKHI-NFNKHVKSLVMTGDKLYCGCSGYSIQEVDLGNLTSTTFYAGTKKL 1200
+V++ + ++ I + + SL ++ +L G Y + + NL TF KL
Sbjct: 572 RVWDLANFECVQTIPGGSGSIYSLAVSNRRLLAGT--YE-NTIVVWNLD--TFEI-INKL 625
Query: 1201 LGK-QTIHSLHMHNGLLFAGGSSVDGTAGKVFSISSKTAVGSFTTGID-IQHLAVNSDFI 1258
G +++L + + ++G S D T KV++ S V + ++ + V+S +
Sbjct: 626 EGHIGAVYTLAVSDKKFYSG--SYDSTI-KVWN-DSLVCVQTLNRHTSSVESIVVSSGCV 681
Query: 1259 FTATKCGTIEVW 1270
F+ + +I+VW
Sbjct: 682 FSGSADNSIKVW 693
Score = 91 (37.1 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 29/99 (29%), Positives = 44/99 (44%)
Query: 306 SNMRGPSSPCNESDEGSQSCNSLPCS-EKMTSRSRPPKDFVCPITGQIFNDPVTLETGQT 364
+N G ++ N + S S S + S PP VCP+ IFN P + G T
Sbjct: 46 NNNNGNNNYYNNNGASSSSIQQSETSIDTHLFVSPPPTTLVCPLHNGIFNQPFIAKCGHT 105
Query: 365 YERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVLKRL 403
+ I + N+T P + P+ S++ TN +LK L
Sbjct: 106 FCFSCI--FKPHANSTSP-NQSPINSSNSTSTNELLKCL 141
Score = 70 (29.7 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 32/117 (27%), Positives = 43/117 (36%)
Query: 219 PXXXXXXXXXXXXYGDSLDENTRMFAKYYKDCMNSDSS---TRTKVIPMLPIAEPPAT-- 273
P G + N YY + S SS + T + L ++ PP T
Sbjct: 27 PVFSSASSNHSTTSGGGFNNNNNGNNNYYNNNGASSSSIQQSETSIDTHLFVSPPPTTLV 86
Query: 274 -PLHEFSRSIPDYVKFGPVLPKSAGFSAVLKSKSNMRGPS-SPCNESDEGSQSCNSL 328
PLH + P K G FS + K +N P+ SP N S+ S S N L
Sbjct: 87 CPLHNGIFNQPFIAKCGHTFC----FSCIFKPHANSTSPNQSPINSSN--STSTNEL 137
Score = 47 (21.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 19/93 (20%), Positives = 38/93 (40%)
Query: 415 AQEFSYSETPKHSFGSSPLKDMTLASSPSRTFNFHIHNNTDDHINERRKRFTQAANATSP 474
A S +++P +S S+ ++ L + + + NN +++ N + AN +
Sbjct: 116 ANSTSPNQSPINSSNSTSTNEL-LKCLNNISISHQSGNNNNNNNNSNNNSNSNIANNQNN 174
Query: 475 TSVISQASVETIINGLKPYVTCLCTSENLQECE 507
T Q + I N + C +L+E E
Sbjct: 175 TQQQQQQPQQNIFNNNTNIMICPIDKMSLREYE 207
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 197 (74.4 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 73/269 (27%), Positives = 118/269 (43%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P F CPI+ + +DPVT+ TGQTY+R +I W+ GNTTCP+TR L +L N+ L
Sbjct: 15 PYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIP-NHTL 73
Query: 401 KRLITSWKEQYPDLAQEFSYSETPKHSFGSSPLKDMTLASSPSRTFNFHIHNNTDDHINE 460
+RLI W + + TPK + P+ +L S S H+ +
Sbjct: 74 RRLIQEWC--VANRSNGVERIPTPKQP--ADPISVRSLLSQASAITGTHVSVRSRAAAI- 128
Query: 461 RRKRFTQAANATSPTSVISQASVETIINGLKPYVTCLCTSENLQECETAVLAIARLWKES 520
RR R + + + + E ++ L + S L A+L + + E+
Sbjct: 129 RRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLHM-TET 187
Query: 521 KGDPGVHAYLLKPTIINGFAEILSASLSREVLRTSVYILSELMVADESVGD---ILTSVD 577
+ + A P+ + GF L S E+ R + L E+++ D I++ D
Sbjct: 188 ECE----AVASDPSRV-GFMTRLLFDSSIEI-RVNAAALIEMVLTGAKSMDLKLIISGSD 241
Query: 578 SDFDCLAALLKNGLGEAAVLIYQLRPAFA 606
S F+ + LLKN + L ++ FA
Sbjct: 242 SIFEGVLDLLKNPISSRRALKIGIKAIFA 270
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 197 (74.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 78/275 (28%), Positives = 123/275 (44%)
Query: 333 KMTSRSR-P--PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLC 389
++ SR R P P+ F CPI+ ++ DPV + TGQTYER +IQ+WL G+ TCP +++ L
Sbjct: 238 RIVSRHRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLL 297
Query: 390 SNSLPKTNYVLKRLITSWKEQYP-DLAQEFSYSETPKHSFGSSPLKDMTLASSPSRTFNF 448
L NYVLK LI W E +L Q T K GSS +S RTF
Sbjct: 298 HAGLTP-NYVLKSLIALWCESNGIELPQNQGSCRTTKIG-GSS-------SSDCDRTFVL 348
Query: 449 HIHNNTDDHINERRKRFTQAANATSPTSVISQASVETIINGLKPYVTCLCTSENLQECET 508
+ + E+++ + +V ++ + G P + L +S + + E
Sbjct: 349 SLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEA--GAIPLLVELLSSPDPRTQEH 406
Query: 509 AVLAIARLWKESKGDPGVHAYLLKPTIINGFAEILSASLSREVLRTSVYILSELMVADES 568
+V A+ L ++G+ G ++ I E+L S E + L L V DE+
Sbjct: 407 SVTALLNL-SINEGNKGA---IVDAGAITDIVEVLKNG-SMEARENAAATLFSLSVIDEN 461
Query: 569 VGDI--LTSVDSDFDCLAALLKNGLGEAAVLIYQL 601
I ++ + L + G +AA I+ L
Sbjct: 462 KVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNL 496
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 195 (73.7 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 75/267 (28%), Positives = 120/267 (44%)
Query: 317 ESDEGSQS---CNSLPCSEKMTSRSR--P--PKDFVCPITGQIFNDPVTLETGQTYERKA 369
E D G + NS + T+ S+ P P DF CPI+ ++ DPV + +GQTYER
Sbjct: 226 EDDNGEEQKVGVNSRSNGQTSTAASQKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTC 285
Query: 370 IQEWLKRGNTTCPITRQPLCSNSLPKTNYVLKRLITSWKEQYPDLAQEFSYSETPKHSFG 429
I++W++ G++TCP T+Q L S +L NYVL+ LI W E A + E PK
Sbjct: 286 IEKWIEGGHSTCPKTQQALTSTTLTP-NYVLRSLIAQWCE-----ANDI---EPPKPPSS 336
Query: 430 SSPLKDMTLASSPSRTFNFH------IHNNTDDHINERRK-RFTQAANATSPTSVISQAS 482
P K ++ SSP+ + N +D + + R NA + ++ +
Sbjct: 337 LRPRK-VSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGA 395
Query: 483 VETIINGLKPYVTCLCTSEN-LQECETAVLAIARLWKESKGDPGVHAYLLKPTIINGFAE 541
+ ++ GL L T ++ +QE L + + +KG ++ I G +
Sbjct: 396 IPLLV-GL------LSTPDSRIQEHSVTALLNLSICENNKGA------IVSAGAIPGIVQ 442
Query: 542 ILSASLSREVLRTSVYILSELMVADES 568
+L S E + L L V DE+
Sbjct: 443 VLKKG-SMEARENAAATLFSLSVIDEN 468
Score = 49 (22.3 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 43/220 (19%), Positives = 82/220 (37%)
Query: 663 SLISANGIPALIKCLDR--VEVRRSIVSILLCCMHADKSCKTLIAKRIELSHVLDLFHDG 720
+++SA IP +++ L + +E R + + L D++ K I + ++ L ++G
Sbjct: 430 AIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDEN-KVTIGALGAIPPLVVLLNEG 488
Query: 721 NDSVRGICINFLSELVLLN-------RRTFSNQILQVIRDEGSFSTMHTFLVYLQMAPME 773
+ L L + R + +++ + GS + ++
Sbjct: 489 TQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHP 548
Query: 774 QQPATASXXXXXXXXVE-PRKMSMYREEAVEALIEALRRKD---FPNSQMMAL-DALLSL 828
+ A VE R S E A++ L D +Q + L L+ L
Sbjct: 549 EGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDL 608
Query: 829 TGRFTFSGKSYTEALLLKIAGF--DQPYNALMKPERLSKP 866
G T GK LL +I+ Q A+ +PE ++P
Sbjct: 609 AGNGTDRGKRKAAQLLERISRLAEQQKETAVSQPEEEAEP 648
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 190 (71.9 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 36/69 (52%), Positives = 47/69 (68%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P +F CPI+ ++ DPV + +GQTYER IQ+WL G+ TCP T+QPL SL N+VL
Sbjct: 229 PDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTP-NFVL 287
Query: 401 KRLITSWKE 409
K LI+ W E
Sbjct: 288 KSLISQWCE 296
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 189 (71.6 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 57/192 (29%), Positives = 95/192 (49%)
Query: 317 ESDEGSQSCNSLPCSEKMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKR 376
++D + N K + + P DF+CP++ ++ DPV + TGQTYER IQ W+
Sbjct: 218 DTDRLDKMVNKNTDESKKSDKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDC 277
Query: 377 GNTTCPITRQPLCSNSLPKTNYVLKRLITSWKEQYPDLAQEFSY-SETPKHSFGSSPLKD 435
GN TCP T+Q L N NYVL+ LI+ W ++ ++ Q Y + K+S S ++
Sbjct: 278 GNLTCPKTQQKL-ENFTLTPNYVLRSLISRWCAEH-NIEQPAGYINGRTKNSGDMSVIRA 335
Query: 436 MTLASSPSRTFNFHIHNNTDDHINERRKRFTQAANATSPTSVISQA-SVETIINGLKPYV 494
+ S SR+ T+D N + + + +T +I++A ++ ++N L
Sbjct: 336 LVQRLS-SRS--------TEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTS-- 384
Query: 495 TCLCTSENLQEC 506
+ T EN C
Sbjct: 385 EDVATQENAITC 396
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 188 (71.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 75/306 (24%), Positives = 137/306 (44%)
Query: 338 SRP---PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLP 394
SRP P +F CPI+ ++ DPV + TGQTYER I++W+ G+ TCP T+Q + +++L
Sbjct: 268 SRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALT 327
Query: 395 KTNYVLKRLITSWKEQYPDLAQEFSYSETPKHSFGSSPLKDMTLASSPSRTFNFHIHNNT 454
NYVL+ LI+ W E + E PK S + P K SS R + +
Sbjct: 328 P-NYVLRSLISQWCET--------NGMEPPKRS--TQPNKPTPACSSSERANIDALLSKL 376
Query: 455 DDHINERRKRFTQAANATSPTSVISQASVETIINGLKPYVTCLCTSENLQECETAVLAIA 514
E ++ + + ++ + G P + L +S +L+ E AV A+
Sbjct: 377 CSPDTEEQRSAAAELRLLAKRNANNRICIAEA--GAIPLLLSLLSSSDLRTQEHAVTALL 434
Query: 515 RLWKESKGDPGVHAYLLKPTIINGFAEILSASL-SREVLRTSVYILSELMVADESVGDIL 573
L + + P+I++ + + S+ +RE +++ LS + ++G +
Sbjct: 435 NLSIHEDNKASIISSGAVPSIVH---VLKNGSMEARENAAATLFSLSVIDEYKVTIGG-M 490
Query: 574 TSVDSDFDCLAALLKNGLGEAAVLIYQL---RPAFAQLSAHEFIPSLVQLVLNKTEEF-D 629
++ + L + G +AA ++ L + + +P ++ LV N T D
Sbjct: 491 GAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMD 550
Query: 630 ELQFVM 635
E ++
Sbjct: 551 EAMAIL 556
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 184 (69.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 72/271 (26%), Positives = 115/271 (42%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGN-TTCPITRQPLCSNSLPKTNYV 399
P F CPI+ ++ DPVT+ TGQTY+R +I+ W+ GN TTCP+TR PL +L N+
Sbjct: 15 PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIP-NHT 73
Query: 400 LKRLITSWKEQYPDLAQEFSYSETPKHSFGSSPLKDMTLASSPSRTFNFHIHNNTDDHIN 459
L+RLI W + + TPK + P L S S H+ +
Sbjct: 74 LRRLIQEWC--VANRSNGVERIPTPKQP--ADPTSVRALLSQASAITGTHVSVRSRAAAL 129
Query: 460 ERRKRFTQAANATSPTSVISQASVETIINGLKPYVTCL-CTSENLQECETAVLAIARLWK 518
R + F + ++ + + + E +I L T SE+L + +
Sbjct: 130 RRLRGFARDSDKNR-VLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQFV 188
Query: 519 ESKGDPGVHAYLLKPTIINGFAEILSASLSREVLRTSVYILSELMVADESVGDILTSVDS 578
DPG +L + + ++A+ E++ T AD G I S +S
Sbjct: 189 SISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGT------KSADLK-GSISNS-ES 240
Query: 579 DFDCLAALLKNGLGEAAVLIYQLRPAFAQLS 609
F+ + LL+N + L ++ FA S
Sbjct: 241 VFEGVLDLLRNPISSRRALKIGIKTLFALCS 271
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 183 (69.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 36/70 (51%), Positives = 47/70 (67%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P +F+CPIT +I DPV + TGQTYE+++IQ+W G+ TCP TRQ L SL N+ L
Sbjct: 291 PHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAP-NFAL 349
Query: 401 KRLITSWKEQ 410
K LI W E+
Sbjct: 350 KNLIMQWCEK 359
Score = 54 (24.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 40/179 (22%), Positives = 79/179 (44%)
Query: 618 VQLVLNKTEEFDELQFVMEPKDAAIEMLEQILMGGDKKSRSITALSLIS----------- 666
V +LN + DE+ + + AI + +IL G++++R +A +L S
Sbjct: 442 VTTLLNLS--IDEVNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTI 499
Query: 667 --ANGIPALIKCLDRVEVRR---SIVSILLCCMHADKSCKTLIAKRIELSHVLDLFHDGN 721
+NGIP L+ L +R ++ ++ +++ + + A ++ +L+L D N
Sbjct: 500 GLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQ--PLLNLLKDKN 557
Query: 722 DSVRGICINFLSELVLLNRRTFSNQILQVIRDEGSFSTMHTFLVYL-QMAPMEQQPATA 779
G+ LS L+LL Q + G S + T + ++ Q P ++ AT+
Sbjct: 558 ---LGMIDEALSILLLLASHPEGRQAI------GQLSFIETLVEFIRQGTPKNKECATS 607
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 185 (70.2 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 40/88 (45%), Positives = 55/88 (62%)
Query: 323 QSCNSLPCSEKMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCP 382
+SCN+ S +M S PP++ CPI+ Q+ DPV + +GQTYER I++W G+ TCP
Sbjct: 265 RSCNNNRRSSQM---SVPPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCP 321
Query: 383 ITRQPLCSNSLPKTNYVLKRLITSWKEQ 410
T Q L S+ NY +K LI+SW EQ
Sbjct: 322 KTHQQL-SHLCLTPNYCVKALISSWCEQ 348
Score = 53 (23.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 35/143 (24%), Positives = 63/143 (44%)
Query: 492 PYVTCLCTSENLQECETAVLAIARLWKESKGDPGVHAYLLKPTIINGFAEILSASLSREV 551
P++ L +E +C+ V A+ L+ S P + LL ++N + L+ S +
Sbjct: 552 PFMVNLLWTETEVQCK--VDALHSLFHLSTYPPNIPC-LLSADLVNAL-QSLTISDEQRW 607
Query: 552 LRTSVYILSELMVADESVGDILTSVDSDFDCLAALLKNGLG---EAAVLIYQLRPAFAQL 608
S+ +L L V +E+ D + S S L +L G E AV + + +++
Sbjct: 608 TEKSLAVLLNL-VLNEAGKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLILCNHSEI 666
Query: 609 SAHEF-----IPSLVQLVLNKTE 626
+ IPSLV + +N T+
Sbjct: 667 CSEMVLQEGVIPSLVSISVNGTQ 689
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 177 (67.4 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 38/89 (42%), Positives = 54/89 (60%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P DF CPI+ +I +DPV L++G T++R +IQ+W+ GN TCPIT+ PL N+ L
Sbjct: 6 PNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHAL 65
Query: 401 KRLI-----TSWKEQY-PDLAQEFSYSET 423
+ LI S KE P QE S+S++
Sbjct: 66 RSLILNFAHVSLKESSRPRTQQEHSHSQS 94
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 166 (63.5 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 34/86 (39%), Positives = 52/86 (60%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P++F CP++ ++ DPV L +GQTY++ IQ+WL GN TCP T+Q L +L N ++
Sbjct: 75 PEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTP-NLLI 133
Query: 401 KRLITSW--------KEQY-PDLAQE 417
+ +I+ W K QY P+L E
Sbjct: 134 REMISKWCKKNGLETKSQYHPNLVNE 159
Score = 61 (26.5 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 668 NGIPALIKCLDRVEVR-RSIVSILLCCMHADKSCKTLIAKRIELSHVLDLFHDGN 721
N IP LI L R V RS + + + A S K LI K L ++DL +GN
Sbjct: 258 NVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGN 312
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 152 (58.6 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 338 SRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTN 397
S PP F CP++ ++ DPV + +GQT++R +I++WL G CP TRQ L L N
Sbjct: 237 SIPPY-FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIP-N 294
Query: 398 YVLKRLITSWKE 409
Y +K +I SW E
Sbjct: 295 YTVKAMIASWLE 306
Score = 82 (33.9 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 83/381 (21%), Positives = 154/381 (40%)
Query: 370 IQEWLKRGNTTCPITRQPLCSNSLPKTNYVLKRLITSWKEQYPDLAQEFSYSE-TPKHSF 428
I E L G + + +CS + +YV +T E L S SE +PK +
Sbjct: 386 IFELLSPGQSYTHSRSESVCS-VVSSVDYVPS--VTHETESI--LGNHQSSSEMSPKKNL 440
Query: 429 GSSPLKDMTLASSPSRTFNFHIHNNTDD------HINERRKRFTQAANA--TSPTSVISQ 480
SS ++ S ++T+ +H+ D H + + +N T+ + I
Sbjct: 441 ESS--NNVNHEHSAAKTYECSVHDLDDSGTMTTSHTIKLVEDLKSGSNKVKTAAAAEIRH 498
Query: 481 ASVETIIN--------GLKPYVTCLCTSENLQECETAVLAIARLWKESKGDPGVHAYLLK 532
++ +I N + P ++ L + E L + E AV A+ L S + A +++
Sbjct: 499 LTINSIENRVHIGRCGAITPLLSLLYSEEKLTQ-EHAVTALLNL---SISELN-KAMIVE 553
Query: 533 PTIINGFAEILSASLSR--EVLRTSVYILSELMVADESVGDILTSVDSDFDCLAALLKNG 590
I +L+ R E S++ LS L V E +G ++ + + L G
Sbjct: 554 VGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRG 613
Query: 591 LGEAAVLIYQLRPAFAQLSAHEFIPSLVQLVLNK--TEEFD-ELQFVMEPKDAAIEMLEQ 647
+AA ++ L H+ +VQ K E D +L+ V D A+ +L
Sbjct: 614 KKDAASALFNLS------ITHDNKARIVQAKAVKYLVELLDPDLEMV----DKAVALLAN 663
Query: 648 ILMGGDKKSRSITALSLISANGIPALIKCLDRVEVR--RSIVSILL-CCMHADKSCKTLI 704
+ G+ + +++ GIP L++ +D R + S+LL C+++ K C TL+
Sbjct: 664 LSAVGEGRQ------AIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFC-TLV 716
Query: 705 AKRIELSHVLDLFHDGNDSVR 725
+ + ++ L G +
Sbjct: 717 LQEGAIPPLVALSQSGTQRAK 737
Score = 51 (23.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 26/130 (20%), Positives = 49/130 (37%)
Query: 724 VRGICINFLSELVLLNRRTFSNQILQVIRDEGSFSTMHTFLVYLQMAPMEQQPATASXXX 783
+R + IN + V + R +L ++ E + H L ++ E A
Sbjct: 496 IRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMIVEVG 555
Query: 784 XXXXXVEPRKMSMYR--EEAVEAL--IEALR-RKDFPNSQMMALDALLSLTGRFTFSGKS 838
V R E + +L + L+ ++ A+ AL++L G+ TF GK
Sbjct: 556 AIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKK 615
Query: 839 YTEALLLKIA 848
+ L ++
Sbjct: 616 DAASALFNLS 625
>DICTYBASE|DDB_G0290687 [details] [associations]
symbol:mhkC "myosin heavy chain kinase C"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0005826 "actomyosin
contractile ring" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IMP] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0005938 "cell cortex" evidence=IEA;IDA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;ISS;IDA] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0045159 "myosin II
binding" evidence=ISS] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0032154 "cleavage furrow"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0290687
GO:GO:0005524 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
GO:GO:0000910 GO:GO:0005826 GO:GO:0018107 GO:GO:0032154 HSSP:P16649
BRENDA:2.7.11.7 EMBL:AAFI02000166 GO:GO:0031037 GO:GO:0045159
GO:GO:0016905 ProtClustDB:CLSZ2846619 EMBL:AB079663 EMBL:AF079447
RefSeq:XP_635600.1 ProteinModelPortal:Q8MY12
EnsemblProtists:DDB0216199 GeneID:8627781 KEGG:ddi:DDB_G0290687
OMA:NTRSSIL Uniprot:Q8MY12
Length = 780
Score = 173 (66.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 69/259 (26%), Positives = 115/259 (44%)
Query: 1018 NATELWHCNEVTELDSSTNGEVLSLIHLKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREH 1077
+A EL H + S V+ +L++ +D +K WD + + I+E++E
Sbjct: 537 DAVELKHVTNIKAHGKSIRA-VIKRPGFDQNILTAGADSLVKEWDINTQ--QTIKEIKE- 592
Query: 1078 TRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEE-IHCLQVHNVKEAVHELTANAEIACF 1136
+ V +++ + LY+G DKT++VW ++ E + L H A+ + A +
Sbjct: 593 SNEVNTIFIQDN--LLYTGCNDKTVKVWDMRSYECVKTLSGHT--RAIKSVCAMGNL--L 646
Query: 1137 VSPATGVKVYNWSGAIKHI--NFNKH---VKSLVMTGDKLYCGCSGYSIQEVDLGNLTST 1191
S + ++Y W+ A I NF H VK+L + LY G +I+ DL T
Sbjct: 647 FSGSNDQQIYVWNLATGTILTNFQGHEGWVKTLYAHNNMLYSGSHDETIRIWDL----KT 702
Query: 1192 TFYAGTKKLLGKQTIHSLHMHNGLLFAGGSSVDGTAGKVFSISSKTAVGSFTTGIDIQHL 1251
T T K K + +LH+ N +FAG G +VFS + S T I L
Sbjct: 703 TRCVNTIKC--KDRVETLHVTNQGIFAGS----GDWLQVFSHDKYENLASLNTRSSILCL 756
Query: 1252 AVNSDFIFTATKCGTIEVW 1270
N + +FT + ++VW
Sbjct: 757 WRNQNQLFTGSLASNLKVW 775
Score = 124 (48.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 51/272 (18%), Positives = 121/272 (44%)
Query: 1021 ELWHCNEVTELDSSTNGEVLSLIHLKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRA 1080
E W + +D+ + + R+ S +DG I +WD+ + L+ + ++ H ++
Sbjct: 496 EKWDLTSIKNIDTVRGLQSECITGDSLRLYSGSNDGQIGVWDAVE--LKHVTNIKAHGKS 553
Query: 1081 VTCLYV-PSSGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEA--VHELTANAEIACFV 1137
+ + P + + D ++ W I ++ + +KE+ V+ + +
Sbjct: 554 IRAVIKRPGFDQNILTAGADSLVKEWDINTQQT----IKEIKESNEVNTIFIQDNLLYTG 609
Query: 1138 SPATGVKVYNWSG--AIKHIN-FNKHVKSLVMTGDKLYCGCSGYSIQEVDLGNLTSTTFY 1194
VKV++ +K ++ + +KS+ G+ L+ SG + Q++ + NL + T
Sbjct: 610 CNDKTVKVWDMRSYECVKTLSGHTRAIKSVCAMGNLLF---SGSNDQQIYVWNLATGTIL 666
Query: 1195 AGTKKLLGKQTIHSLHMHNGLLFAGGSSVDGTAGKVFSISSKTAVGSFTTGIDIQHLAVN 1254
+ G + +L+ HN +L++G S D T +++ + + V + ++ L V
Sbjct: 667 TNFQGHEG--WVKTLYAHNNMLYSG--SHDETI-RIWDLKTTRCVNTIKCKDRVETLHVT 721
Query: 1255 SDFIFTATKCGTIEVWLKERVTRVASVKANNS 1286
+ IF + ++V+ ++ +AS+ +S
Sbjct: 722 NQGIFAGSG-DWLQVFSHDKYENLASLNTRSS 752
Score = 58 (25.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 299 SAVLKSKSNMRGPSSPCNESDEGSQSCNSLPCSEKMTSRSRPPKDFVCP 347
S+ + S S+ SS + S S + N+ P S +++ S PP+ + P
Sbjct: 412 SSSVNSNSSSVSSSSSSSSSSSSSSTTNAAPISIQVSRNSPPPQQPIQP 460
Score = 53 (23.7 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 272 ATPLH-EFSRSIPDYVKFGPVLPKSAGFSAVLKSKSNMRGPSSPCNESDE 320
A P+ + SR+ P + P+ P SA SA S SN+ P S S E
Sbjct: 440 AAPISIQVSRNSPPPQQ--PIQPSSAAASASSTSSSNVPTPESTSTSSME 487
Score = 49 (22.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 439 ASSPSRTFNFHIHNNTDDHINERRKRFTQAANATSPTSVISQAS 482
+S S N + +NN +D+IN + +N++S +S S +S
Sbjct: 387 SSISSNNDNSNNNNNNNDNINNSSNSSSVNSNSSSVSSSSSSSS 430
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 161 (61.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 48/150 (32%), Positives = 78/150 (52%)
Query: 339 RPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNY 398
R P DF C ++ ++ DPV + +GQT+ER IQ+W+ G CP TRQ L +L N+
Sbjct: 239 RVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTP-NF 297
Query: 399 VLKRLITSWKEQ---YPDLAQEFSYSETPKHSFGSSPLKDMTLASSPSRTFNFHIHNNTD 455
+++ + SW E YP E +S P F PL ++ +S S H+ +
Sbjct: 298 IVRAFLASWCETNNVYPPDPLELIHSSEP---F---PLLVESVRASSSENG----HSESL 347
Query: 456 DHINERRKRFTQAANATSPTSVISQASVET 485
D E R+ F+++A+A P ++S+ +T
Sbjct: 348 D-AEELRQVFSRSASA--P-GIVSEVVCKT 373
Score = 67 (28.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 20/92 (21%), Positives = 47/92 (51%)
Query: 623 NKTE--EFDELQFVMEPKDAAIEMLEQ-ILMGGDKKSRSITALSLISANGIPALIKCLDR 679
NKT+ E +++++E D A M+E+ +++ + + +++ GIP L++ ++
Sbjct: 579 NKTKVIEAGAVRYLVELMDPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVEL 638
Query: 680 VEVR---RSIVSILLCCMHADKSCKTLIAKRI 708
R + ++L C H+ K C +I + +
Sbjct: 639 GSARGKENATAALLQLCTHSPKFCNNVIREGV 670
Score = 37 (18.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 990 IYGTLRKLKKYSAVVTDIQKALMNLSS 1016
I T+R+ S++ T+++K + +L S
Sbjct: 406 IPATVRETGSSSSIETEVKKLIDDLKS 432
Score = 37 (18.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 767 LQMAPMEQQPATASXXXXXXXXVEPRKMSMYREEAVEALIEAL 809
L+ +E+ A ++ +E K + A+E L++ L
Sbjct: 513 LKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLL 555
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 160 (61.4 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 35/100 (35%), Positives = 55/100 (55%)
Query: 327 SLPCSEKMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQ 386
S P SE + + PP +F CPI+ + DPV + TG TY+R +I+ W+ GN TCP+T
Sbjct: 19 SWPESEPESEITIPP-EFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNT 77
Query: 387 PLCS-NSLPKTNYVLKRLITSW-KEQYPDLAQEFSYSETP 424
L + + +P N+ ++++I W E+ L Q P
Sbjct: 78 VLTTFDQIP--NHTIRKMIQGWCVEKGSPLIQRIPTPRVP 115
Score = 60 (26.2 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 48/186 (25%), Positives = 81/186 (43%)
Query: 517 WKESKGDPGVHAYLLKPTIINGFAEILSASLSREVLRTSVYILSELMVADESVGDILTSV 576
W G G+ + L T A +L S V + + +I+ E++ DE T V
Sbjct: 196 WMFPIGLEGI-SKLASATSFRCVAGLLK-STDDSVRQNAAFIMKEILSLDE------TRV 247
Query: 577 DSDFDCLAALLKNGLGEAAVLIYQLRPAFAQLSAHEFIPSLVQLVLNKTE---EFDELQF 633
S F ++NG+ EA V + +R + + S + ++ Q+VL K E EF E+
Sbjct: 248 HS-F-----AVENGVAEALVKL--IRDSVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGL 299
Query: 634 V---MEP-KDAAIEMLEQILMGGDKKSRSITALSLISANGI--PALIKCLDRVE--VRRS 685
V +E DA + E+ L D + + N + P L+K + +V RS
Sbjct: 300 VSITVEMIVDAENSVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRS 359
Query: 686 IVSILL 691
+S++L
Sbjct: 360 SMSMIL 365
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 175 (66.7 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 324 SCNSLPCSEKMTSRSR-PPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCP 382
S N P + + + + PP++ CPI+ Q+ DPV + +GQTYER I++W G+ +CP
Sbjct: 258 SINYKPMNSRKSGQMPIPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCP 317
Query: 383 ITRQPLCSNSLPKTNYVLKRLITSWKEQ 410
T+Q L SL NY +K LI SW EQ
Sbjct: 318 KTQQQLPHLSLTP-NYCVKGLIASWCEQ 344
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 172 (65.6 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 69/252 (27%), Positives = 120/252 (47%)
Query: 1025 CNEVTELDSSTNGEVLSLIHLKGRVLSSHS-DGTIKMWDSGKRVLRLIQEVREHTRAVTC 1083
C +V L ++G V+ L L +L+S S D TI++W+ + + + H+ VTC
Sbjct: 264 CRQVV-LSGHSDG-VMCL-QLVRNILASGSYDATIRLWNLA--TFQQVALLEGHSSGVTC 318
Query: 1084 LYVPSSGDKLYSGSLDKTIRVWSIKPEEIHCLQV-HNVKEAVHELTANAEIACFVSPATG 1142
L KL SGS+DKTIR+W+ + E C+ + H ++V LT ++ + S
Sbjct: 319 LQFDQC--KLISGSMDKTIRIWNYRTSE--CISILHGHTDSVLCLTFDSTLLVSGSADCT 374
Query: 1143 VKVYNWSGAIKHINFNKH---VKSLVMTGDKLYCGCSGYSIQEVDLGNLTSTTFYAGTKK 1199
VK++++SG K I H V S+ + D+ SG + + +L + T
Sbjct: 375 VKLWHFSGG-KRITLRGHTGPVNSVRIIRDRGLV-LSGSDDSTIKIWSLETNTCLHTFSA 432
Query: 1200 LLGKQTIHSLHMHNGLLFAGGSSVDGTAGKVFSISSKTAVGSFTTGID-IQHLAVNSDFI 1258
+G + SL + + LF+ S+DGT K + I K V + I+ + +A + +
Sbjct: 433 HIGP--VQSLALADSRLFS--CSLDGTI-KQWDIEKKKCVHTLFGHIEGVWEIAADHLRL 487
Query: 1259 FTATKCGTIEVW 1270
+ G ++VW
Sbjct: 488 ISGAHDGVVKVW 499
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 151 (58.2 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 31/69 (44%), Positives = 39/69 (56%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P F CPI+ + PV+L TG TY+R +IQ WL GN TCP T Q L + N L
Sbjct: 13 PSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVP-NLTL 71
Query: 401 KRLITSWKE 409
+RLI W +
Sbjct: 72 QRLINIWSD 80
Score = 58 (25.5 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 26/97 (26%), Positives = 48/97 (49%)
Query: 612 EFIPSLVQLVLNKTEEFDELQFVMEPKDAAIEMLEQILMGGDKKSRSITALSLISANGIP 671
EF+P LV ++ K + EL +M AI +L+ I + D++ S L+ + +
Sbjct: 142 EFVPMLVDIIRTKKTKI-EL-VIM-----AIRILDSIKV--DRERLSNLMLANDGGDCLT 192
Query: 672 ALIKCLDRVEVRRSIVSI-LLCCMHADKSCKTLIAKR 707
A++ + R + I S+ +L + D K +IA+R
Sbjct: 193 AILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAER 229
Score = 50 (22.7 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 27/108 (25%), Positives = 45/108 (41%)
Query: 904 LEECLKSNSLEMAKSCLVIAAWLTHMLSTLPDTGVRGTARRSLLDEFINVLQSSRNLEEK 963
L E +KS S+ + +I A L+ +++ VR + I + + L
Sbjct: 233 LTEMMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNV 292
Query: 964 ILTALALK---TFISDPVA-LEELGK-YAKCIYGTLRKLKKYSAVVTD 1006
+T +LK T S LE G +C+ G ++KL K S T+
Sbjct: 293 AVTEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATE 340
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 151 (58.2 bits), Expect = 8.2e-09, Sum P(3) = 8.2e-09
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 330 CSEKMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLC 389
CSE++ P F CPI+ ++ DPV + +G TY+R+ I++W + G TCP+T L
Sbjct: 25 CSEEVEITI--PSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLT 82
Query: 390 S-NSLPKTNYVLKRLITSW 407
S +P N+ ++R+I W
Sbjct: 83 SLEQIP--NHTIRRMIQGW 99
Score = 66 (28.3 bits), Expect = 8.2e-09, Sum P(3) = 8.2e-09
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 506 CETAVLAIARLWKESKGDPGV----HAYLLKPTIINGFAEILSASLSREVLRTSVYILSE 561
C V + RL KES+ + A L+ + F+E +ASL +L +V +L+
Sbjct: 142 CMEMVTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASL---LLEETVSVLTW 198
Query: 562 LM-VADESVGDILTSVDSDFDCLAALLKNGLGEAAVLIYQL 601
++ + E + T+ S F+ L LL+NG AA LI +L
Sbjct: 199 MLPIGLEGQSKLTTT--SSFNRLVELLRNGDQNAAFLIKEL 237
Score = 42 (19.8 bits), Expect = 8.2e-09, Sum P(3) = 8.2e-09
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 670 IPALIKCLDRVEVRRSIVSILL-CCMHADKS 699
IP L+K + ++ ++ +VS++ C D S
Sbjct: 337 IPILVKKILKISEKKDLVSVMWKVCKSGDGS 367
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 167 (63.8 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 54/163 (33%), Positives = 77/163 (47%)
Query: 248 KDCMNSDSSTRTKVIPMLPIAEPPATPLHEFSR---SIPDYVKFGPVLPKSAGFSAVLKS 304
K ++ D ST K+ L +++ A+ E R I D + ++ V S
Sbjct: 191 KHQISPDHSTLIKIFNDLGLSDS-ASLTDEIQRLEDEIQDQIDDRSKSAAASLIGLVRYS 249
Query: 305 KSNMRGPSSPCNESDEGSQSCNSLPCSEKMTSRSRPPKDFVCPITGQIFNDPVTLETGQT 364
K + GPS+P + QS S + P DF CPIT ++ DPV + TGQT
Sbjct: 250 KCVLYGPSTPAPDFRR-HQSL----------SDANIPADFRCPITLELMRDPVVVATGQT 298
Query: 365 YERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVLKRLITSW 407
Y+R++I W++ G+ TCP T Q L SL N LK LI W
Sbjct: 299 YDRESIDLWIQSGHNTCPKTGQVLKHTSLVP-NRALKNLIVLW 340
Score = 54 (24.1 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 30/125 (24%), Positives = 53/125 (42%)
Query: 557 YILSELMVADES--VGDILTSVDSDFDCLAALLKNGLGEAAVLIYQLRPAFAQLSAHEFI 614
+++ +L VAD + V ++ SD A + + G V Q++A I
Sbjct: 374 FLIEKLSVADSNGVVFELRALAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTI 433
Query: 615 PSLVQLVLNKTEEFDELQFVMEPKDAAIEMLEQILMGGDKKSRSITALSLISANGIPALI 674
+L L NKT +ME A ++E + G ++++ A +L S G+ A
Sbjct: 434 LNLSILEQNKTR-------IMETDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYR 486
Query: 675 KCLDR 679
+ L R
Sbjct: 487 RRLGR 491
Score = 49 (22.3 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 28/104 (26%), Positives = 42/104 (40%)
Query: 915 MAKSC--LVIAAWLTHM-LSTLPDTGVRGTARRSLLDEFINVLQSSRNLEEKILTALALK 971
+A C L I A T + LS L R L+ I VL+S E K A L
Sbjct: 418 LATECPSLQINAVTTILNLSILEQNKTRIMETDGALNGVIEVLRSGATWEAKANAAATLF 477
Query: 972 TFISDPVALEELGKYAKCIYGTLRKLKKY-SAVVTDIQKALMNL 1014
+ LG+ A+ + G + K+ ++ D A++NL
Sbjct: 478 SLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSKRDALVAILNL 521
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 166 (63.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 61/233 (26%), Positives = 102/233 (43%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGN-TTCPITRQPLCSNSLPKTNYV 399
P F+CPI+ +I DPV + TG TY+R +I++WL G +CP+T+Q + L N+
Sbjct: 13 PPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTP-NHT 71
Query: 400 LKRLITSWKEQYPDLAQEFSYSETPKHSFGSSPLKDMTLASSPSRTFNFHIHNNTDDHIN 459
L+RLI SW E TP+ S ++ + S+ S ++
Sbjct: 72 LRRLIQSWCTLNASYGVE--RIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQIVS 129
Query: 460 ER--RKRFTQAANATS-PTSVISQAS-----VETIINGLKPYVTCLCTSENL---QECET 508
E KR +AA +++S S + +N L T +NL ++
Sbjct: 130 ENATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSETVLKNLLNNKKDNN 189
Query: 509 AVLAIARLWKESKGDPGVHAYLLKPTIINGFAEILSASLSREVLRTSVYILSE 561
V ++ ++ + + V+A LL I+ + S +L EV V IL +
Sbjct: 190 IVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDD 242
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 166 (63.5 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 54/175 (30%), Positives = 82/175 (46%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGN-TTCPITRQPLCSNSLPKTNYV 399
P F+CPI+ I DPV + TG TY+R++I++WL G +CP+T+Q + L N+
Sbjct: 8 PSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTP-NHT 66
Query: 400 LKRLITSWKEQYPDLAQEFSYSETPKHSFGSSPLKDMTLASSPSRTFNFHIHNNTDDHIN 459
L+RLI SW E TPK S ++ + SS S ++
Sbjct: 67 LRRLIQSWCTLNASYGIE--RIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQIVS 124
Query: 460 ER--RKRFTQAANATSPTSVISQASVETIINGLKPYVTCLCTSENLQE-CETAVL 511
E KR +AA + I SV+T N P + +S NL + C++ +L
Sbjct: 125 ENTTNKRCLEAAEVPEFLANIVSNSVDTY-NS--P--SSSLSSSNLNDMCQSNML 174
Score = 45 (20.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 21/77 (27%), Positives = 32/77 (41%)
Query: 939 RGTARRSLLDEFINVLQSSRNLEEKILTALALK---TFISDPVALEELGKYAKCIYGTLR 995
R + RSL+DE ++VL E + + L K + + + G Y Y L
Sbjct: 177 RFDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALL 236
Query: 996 KLKKYSAVVTDIQKALM 1012
LKK V +Q L+
Sbjct: 237 -LKKLLEVADPMQIILL 252
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 154 (59.3 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 32/70 (45%), Positives = 41/70 (58%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P F+CPI+ + DPVTL TGQTYER I +W G+ TCP T Q L +++ N L
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTP-NKTL 123
Query: 401 KRLITSWKEQ 410
LI +W Q
Sbjct: 124 HHLIYTWFSQ 133
Score = 58 (25.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 20/96 (20%), Positives = 47/96 (48%)
Query: 641 AIEMLEQILMGGDKKSRSITALSLISANGIPALIKCLDRVEVRRSIVSILLCCMHADKSC 700
A+ L+QI++ +++ +S I +L+ V +V+IL+ + D
Sbjct: 167 ALSELKQIVIAHLMARKTVVEEGGVSV--ISSLLGPFTSHAVGSEVVAILVS-LDLDSDS 223
Query: 701 KTLIAKRIELSHVLDLFHDGNDSVRGICINFLSELV 736
K+ + + ++S ++D+ +DG++ + C + LV
Sbjct: 224 KSGLMQPAKVSLIVDMLNDGSNETKINCARLIRGLV 259
Score = 43 (20.2 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 34/141 (24%), Positives = 66/141 (46%)
Query: 588 KNGLGEAAVLIYQLRPAFAQLSAHEFIPSLVQLVLNKTEEFDELQFVMEPK--DAAIEML 645
+NG+ A L L+P +S H+ + SL+ + + + ++ ++P+ + A+ +L
Sbjct: 288 RNGVSPALRL---LKP----ISVHKQVRSLM-VSIGAVPQLVDILPSLDPECLELALFVL 339
Query: 646 EQILMGGDKKSRSITALSLISANGIPALIKCLDRVEVRRS--IVSILLC-CMHADKSCKT 702
+ + D + R A+ SAN IP ++ L RV + +SIL C A + C
Sbjct: 340 DALCT--DVEGR--VAVK-DSANTIPYTVRVLMRVSENCTNYALSILWSVCKLAPEECSP 394
Query: 703 LIAKRIELSHVLDLFHDGNDS 723
L + + +L + G D+
Sbjct: 395 LAVEVGLAAKLLLVIQSGCDA 415
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 156 (60.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 37/85 (43%), Positives = 44/85 (51%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P F CPI+ + PV+L TG TY+R +IQ WL GN TCP T Q L N N L
Sbjct: 12 PCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQIL-QNKEFVPNLTL 70
Query: 401 KRLITSWKEQYPDLAQ-EFSYSETP 424
RLI W + A E S+TP
Sbjct: 71 HRLIDHWSDSINRRADSESPESDTP 95
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 154 (59.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 33/70 (47%), Positives = 41/70 (58%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P F+CPI+ + DPVTL TGQTYER I +W G+ TCP T Q L + L N L
Sbjct: 61 PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDD-LVTPNKTL 119
Query: 401 KRLITSWKEQ 410
+LI +W Q
Sbjct: 120 HQLIYTWFSQ 129
Score = 50 (22.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 20/99 (20%), Positives = 45/99 (45%)
Query: 641 AIEMLEQILMGGDKKSRSITALSLISANG---IPALIKCLDRVEVRRSIVSILLCCMHAD 697
A+ L+Q++M + +I +++ G I +L+ V ++IL+ + D
Sbjct: 163 ALSELKQVVM-----AHAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAIAILVN-LELD 216
Query: 698 KSCKTLIAKRIELSHVLDLFHDGNDSVRGICINFLSELV 736
K + + +S ++D+ +DG+ + C + LV
Sbjct: 217 SDSKAGLMQPARVSLMVDMLNDGSIETKINCARLIGRLV 255
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 159 (61.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
PK+F CPI+ + DPV TGQTY+R +I +W++ G++TCP + Q L + L N L
Sbjct: 298 PKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVP-NRAL 356
Query: 401 KRLITSW 407
+ LI+ W
Sbjct: 357 RSLISQW 363
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 170 (64.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 35/71 (49%), Positives = 45/71 (63%)
Query: 340 PPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYV 399
PP++ CPI+ Q+ DPV + +GQTYER I++W G+ TCP T+Q L SL N V
Sbjct: 272 PPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCV 331
Query: 400 LKRLITSWKEQ 410
K LI SW EQ
Sbjct: 332 -KGLIASWCEQ 341
Score = 40 (19.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 597 LIYQLRPAFAQLSAHEFIPSLVQLVLNKTEEFDELQFVMEPKDAAIEMLEQILMGGD--K 654
+I L+ A + +I + ++LN + + + I L +L GD +
Sbjct: 594 IIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQ-GMISSLATVLDMGDTTE 652
Query: 655 KSRSITALSLISANGIPALIKCLDRVEVRRSIVSI 689
+ ++++ L LI NG + I+ + + V S+VSI
Sbjct: 653 QEQAVSCL-LILCNGRESCIQMVLQEGVIPSLVSI 686
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 158 (60.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 338 SRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCS-NSLPKT 396
++PP F+CP+ + N+P G TY+R AI+EWLK NT+ P+T PL S N LP
Sbjct: 764 TQPPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHNTS-PMTDSPLHSKNLLP-- 820
Query: 397 NYVLKRLITSWK 408
NY L I W+
Sbjct: 821 NYTLYTAIMEWR 832
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 152 (58.6 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
PK+F+C ++ I +PV + +GQTYE++ I EWLK TCP T+Q L S+ L N+++
Sbjct: 73 PKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVL-SHRLWIPNHLI 130
Query: 401 KRLITSW 407
LIT W
Sbjct: 131 SDLITQW 137
Score = 50 (22.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 47/181 (25%), Positives = 76/181 (41%)
Query: 908 LKSNSLEMAKSCLVIAAWLTHMLSTLPDTGVRGTARR----SLLDEFINVLQSSRN---- 959
L+SN +A++CLVI LT L D R A S +D ++ +S
Sbjct: 240 LESNKTVIAENCLVIPL-LTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIGNSEAVKAL 298
Query: 960 ---LEEKILTAL--ALKTFISDPVALEELGKY--AKCIYGTLRKLKKYSAVVTDIQKALM 1012
+EE L A A T + + LE GK A I+ +K+K S V L+
Sbjct: 299 IDLIEEGDLLATKEATSTVFNLCIVLENKGKVVSAGLIHAATKKIKAGSNV-----DELL 353
Query: 1013 NLSSVNATELWHCNEVTELDS-STNGEVLSLIHLKGRVLSSHSDGTI--KMWDSGKRVLR 1069
+L ++ +T H V E+D ++ S++ +L+ + I M+D + R
Sbjct: 354 SLLALIST---HNRAVEEMDKLGFIYDLFSILRKPSSLLTGENAVVIVFNMYDRNRDRSR 410
Query: 1070 L 1070
L
Sbjct: 411 L 411
Score = 43 (20.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 31/110 (28%), Positives = 51/110 (46%)
Query: 945 SLLDEFINVLQSSRNLEEKILTALA-LKTFISDPVALEELGKYAKC-IYGTLRKLKKYSA 1002
S LDE ++ SS L+E I+TAL L S+ + E C + L K K
Sbjct: 214 STLDEAVD---SSLELQENIVTALFNLSILESNKTVIAE-----NCLVIPLLTKSLKQGT 265
Query: 1003 VVTDIQKALMNLSSVNATELWHCNEVTELDSSTNGEVLSLIHLKGRVLSS 1052
T + A LSS++A + N++ +S ++ LI +G +L++
Sbjct: 266 DETR-RNAAATLSSLSAID---SNKIIIGNSEAVKALIDLIE-EGDLLAT 310
Score = 42 (19.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 779 ASXXXXXXXXVEPRKMSMYREEAVEALIEALRRKD 813
A+ ++ K+ + EAV+ALI+ + D
Sbjct: 272 AAATLSSLSAIDSNKIIIGNSEAVKALIDLIEEGD 306
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 156 (60.0 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 334 MTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSL 393
M RS D CPI+ +I +DPV LE+G TY+R +I +W GN TCP T + L S L
Sbjct: 272 MMVRSLNVDDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVL 331
Query: 394 PKTNYVLKRLITSWKEQ 410
N+ +K++I S+ +Q
Sbjct: 332 VD-NFSVKQVIQSYSKQ 347
Score = 51 (23.0 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 28/126 (22%), Positives = 54/126 (42%)
Query: 892 LCNHEKGSIFKALEEC-LKSNSLEMAKSCLVIAAWLTHMLSTL--PDTGVRGTARRSLLD 948
L ++ + KAL E + + + +SCLV A + ++ L D ++ A +++
Sbjct: 383 LIKGDEEEMVKALVEIRILTKTSTFYRSCLVEAGVVESLMKILRSDDPRIQENAMAGIMN 442
Query: 949 EFINVLQSSRNLEEKILTALALKTFISDPVALEELGKYAKCIYGTLRKLKKYSAVVTDIQ 1008
++ +R + E L L + + A E +YA L L YS ++ +I
Sbjct: 443 LSKDIAGKTRIVGEDG-GGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEIS 501
Query: 1009 KALMNL 1014
A+ L
Sbjct: 502 DAIPGL 507
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 148 (57.2 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 32/70 (45%), Positives = 41/70 (58%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNS-LPKTNYV 399
P F CPI+ + PV+L TG TY+R +IQ WL GN TCP T Q L + +P N
Sbjct: 11 PTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIP--NRT 68
Query: 400 LKRLITSWKE 409
L+RLI W +
Sbjct: 69 LQRLIEIWSD 78
Score = 52 (23.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 33/147 (22%), Positives = 65/147 (44%)
Query: 900 IFKALEECLKSNSLEMAKSCLVIAAWLTHMLSTLPDTGVRGTARRSLLDEFINVLQSSRN 959
+ K++ + + +E + SCL+ + + L + G + L D ++ S +
Sbjct: 243 LMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSL---SVS 299
Query: 960 LEEKILTALALKTFISDPVALEELGKYAKCIYGTLRKLKKYSAVVTDIQKALMNLSSVNA 1019
+ EK L L + + + E G +C+ ++KL K S T+ A+ L SV+
Sbjct: 300 VTEKCLKLLEILASTKEGRS-EICGGDGECLKTVVKKLMKVSTAATE--HAVTVLWSVSY 356
Query: 1020 TELWHCNEVTELDSSTNGEVLSLIHLK 1046
L+ ++ E +S NG L+ L+
Sbjct: 357 --LFKEDKALEAVTSVNGVTKILLLLQ 381
Score = 49 (22.3 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 33/143 (23%), Positives = 54/143 (37%)
Query: 841 EALLLKIAGFDQPYNALMKPERLSKPXXXXXXXXXXXXQAACSWEKRVAFVLCNHEK-GS 899
E+ LL IA D LMK +SK A S KRV L + G
Sbjct: 228 ESKLL-IAERDGLITELMKS--ISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGD 284
Query: 900 IFKALEECLKSNSLEMAKSCLVIAAWLTHMLSTLPDT-GVRGTARRSLLDEFINVLQSSR 958
+ K L + S S+ + + CL + L + G G ++++ + + V S+
Sbjct: 285 VTKLLSDSTSSLSVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKV--STA 342
Query: 959 NLEEKILTALALKTFISDPVALE 981
E + ++ + ALE
Sbjct: 343 ATEHAVTVLWSVSYLFKEDKALE 365
>TAIR|locus:2173103 [details] [associations]
symbol:AT5G51980 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000571 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50103
PROSITE:PS50294 SMART:SM00320 SMART:SM00356 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB015478 HOGENOM:HOG000239729 ProtClustDB:CLSN2687444
EMBL:AJ252064 EMBL:BX831861 IPI:IPI00541710 IPI:IPI00657147
RefSeq:NP_001032059.1 RefSeq:NP_200011.1 UniGene:At.29648
UniGene:At.9328 ProteinModelPortal:Q9FNZ1 SMR:Q9FNZ1 STRING:Q9FNZ1
PaxDb:Q9FNZ1 PRIDE:Q9FNZ1 EnsemblPlants:AT5G51980.2 GeneID:835273
KEGG:ath:AT5G51980 GeneFarm:3786 TAIR:At5g51980 InParanoid:Q9FJ94
OMA:ATNCFEP PhylomeDB:Q9FNZ1 Genevestigator:Q9FNZ1 Uniprot:Q9FNZ1
Length = 443
Score = 150 (57.9 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 63/229 (27%), Positives = 102/229 (44%)
Query: 1018 NATELWHCNEVTELDSSTNG---EVLSLIHLKGRVLSSHSDGTIKMW--DSGKRVLRLIQ 1072
N + W N T D S +G +V SL+ + + DG+I W ++
Sbjct: 211 NLVKAW--NIETNADQSLSGPVGQVYSLVVGTDLLFAGTQDGSILAWRYNAATNCFEPSA 268
Query: 1073 EVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEEIHCLQ-VHNVKEAVHELTANA 1131
+ HT AV LYV ++LYSGS+DKTI+VWS+ + + C+Q + + V L
Sbjct: 269 SLTGHTLAVVTLYV--GANRLYSGSMDKTIKVWSL--DNLQCIQTLTDHSSVVMSLICWD 324
Query: 1132 EIACFVSPATGVKVYNW-SGAIKHINFN---KH-VKSLVMTGDK-----LYCGCSGYSIQ 1181
+ S VK++ G + + +H V +L D L C C+ +++
Sbjct: 325 QFLLSCSLDNTVKIWAAIEGGNLEVTYTHKEEHGVLALCGVHDAEAKPVLLCACNDNTLR 384
Query: 1182 EVDLGNLTSTTFYAGTKKLLGKQTIHSLHMHNGLLFAGGSSVDGTAGKV 1230
DL +L + K+ KQ I ++ + G +F G DGT G+V
Sbjct: 385 LYDLPSLGLFIRFTERGKIFAKQEIRAIQIGPGGIFFTG---DGT-GQV 429
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 149 (57.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 70/288 (24%), Positives = 127/288 (44%)
Query: 1034 STNGEVLSLIH-LKGRVLSSH------------SDGTIKMWDSGKRVLRLIQEVREHTRA 1080
S N E + LI +KG ++SH SD +I+++D + + +Q ++ H
Sbjct: 445 SINLETIKLIETIKGYHVTSHLCICDNLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGP 504
Query: 1081 VTCLYVPSSGDKLYSGSLDKTIRVWSIKPEE-IHCLQVHNVKEAVHELTANAEIACFVSP 1139
V + + L+SGS D +I+VW +K I L+ H+ + VH + N + S
Sbjct: 505 VESICY--NDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHD--KPVHTVLLNDKYLFSGSS 560
Query: 1140 ATGVKVYNWSGAIKHINFNKH---VKSLVMTGDKLYCGCSGYSIQEVDLGNLTSTTFYAG 1196
+KV++ H VK+L ++G L+ G + +I+ DL G
Sbjct: 561 DKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKG 620
Query: 1197 TKKLLGKQTIHSLHMHNGLLFAGGSSVDGTAGKVFSISSKTAVGSFTTGID--IQHLAVN 1254
K + I ++++G S D T +V+++ S + G D ++H+ +
Sbjct: 621 HTKWVTTICILGTNLYSG-------SYDKTI-RVWNLKSLECSATLR-GHDRWVEHMVIC 671
Query: 1255 SDFIFTATKCGTIEVWLKERVTRVASVKANNSGGGH-AKITCLGTGVD 1301
+FTA+ TI++W E +++ N + GH A + CL D
Sbjct: 672 DKLLFTASDDNTIKIWDLE------TLRCNTTLEGHNATVQCLAVWED 713
Score = 135 (52.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 42/129 (32%), Positives = 64/129 (49%)
Query: 985 KYAKCIYGTLRKLKKYSAVVTDIQKALMNLSSVNATELWHCNEVT-ELDSSTNGEVLSLI 1043
K +CI+ TL K V K L + SS ++W + + ++ + +
Sbjct: 530 KKLRCIF-TLEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTL 588
Query: 1044 HLKGRVLSSHS-DGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTI 1102
+ G+ L S S D TIK+WD + R ++ HT+ VT + + G LYSGS DKTI
Sbjct: 589 CISGQYLFSGSNDKTIKVWDL--KTFRCNYTLKGHTKWVTTICI--LGTNLYSGSYDKTI 644
Query: 1103 RVWSIKPEE 1111
RVW++K E
Sbjct: 645 RVWNLKSLE 653
Score = 53 (23.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 23/82 (28%), Positives = 36/82 (43%)
Query: 410 QYPDLAQEFSYSETPKHSFGSSPLKDMTLASSPSRTFNFHIHNNTDDHINERRKRFTQAA 469
QY +L SE K G+ P D+ + R N +NN +++ N +
Sbjct: 321 QYLNLQSINPKSE--KSDCGTVPRPDLIFPDTSERDNN---NNNNNNNNNNNNNNNNNSN 375
Query: 470 NATSPTSVISQASVETIINGLK 491
N + S IS++ VE I +G K
Sbjct: 376 NNNNNNSSISKSLVE-ISSGSK 396
Score = 37 (18.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 323 QSCNSLPCSEKMTSRSRPPKDFVCPITGQIFND 355
QS N P SEK + P D + P T + N+
Sbjct: 326 QSIN--PKSEKSDCGTVPRPDLIFPDTSERDNN 356
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 145 (56.1 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 66/256 (25%), Positives = 116/256 (45%)
Query: 1049 VLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIK 1108
++S +D T+K+W++ I + HT V C+++ ++ SGS D T+RVW I+
Sbjct: 356 IISGSTDRTLKVWNA--ETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIE 411
Query: 1109 PEE-IHCLQVHNVKEAVHELTANAEIACFVSPATGVKVYNWSGAIK---HI--NFNKHVK 1162
+ +H L H AV + + VS A V W + H V
Sbjct: 412 TGQCLHVLMGHVA--AVRCVQYDGRRV--VSGAYDFMVKVWDPETETCLHTLQGHTNRVY 467
Query: 1163 SLVMTGDKLYCGCSGYSIQ--EVDLGNLTSTTFYAGTKKLLGKQTIHS-LHMHNGLLFAG 1219
SL G + G SI+ +V+ GN T L G Q++ S + + + +L +G
Sbjct: 468 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT--------LTGHQSLTSGMELKDNILVSG 519
Query: 1220 GSSVDGTAGKVFSISS----KTAVGSFTTGIDIQHLAVNSDFIFTATKCGTIEVW-LK-- 1272
+ D T K++ I + +T G + L N +F+ T++ GT+++W LK
Sbjct: 520 NA--DSTV-KIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 576
Query: 1273 ERVTRVASVKANNSGG 1288
E + + ++++ SGG
Sbjct: 577 EFIRNLVTLESGGSGG 592
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 144 (55.7 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 66/256 (25%), Positives = 116/256 (45%)
Query: 1049 VLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIK 1108
++S +D T+K+W++ I + HT V C+++ ++ SGS D T+RVW I+
Sbjct: 314 IISGSTDRTLKVWNA--ETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIE 369
Query: 1109 PEE-IHCLQVHNVKEAVHELTANAEIACFVSPATGVKVYNWSGAIK---HI--NFNKHVK 1162
+ +H L H AV + + VS A V W + H V
Sbjct: 370 TGQCLHVLMGHVA--AVRCVQYDGRRV--VSGAYDFMVKVWDPETETCLHTLQGHTNRVY 425
Query: 1163 SLVMTGDKLYCGCSGYSIQ--EVDLGNLTSTTFYAGTKKLLGKQTIHS-LHMHNGLLFAG 1219
SL G + G SI+ +V+ GN T L G Q++ S + + + +L +G
Sbjct: 426 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT--------LTGHQSLTSGMELKDNILVSG 477
Query: 1220 GSSVDGTAGKVFSISS----KTAVGSFTTGIDIQHLAVNSDFIFTATKCGTIEVW-LK-- 1272
+ D T K++ I + +T G + L N +F+ T++ GT+++W LK
Sbjct: 478 NA--DSTV-KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 534
Query: 1273 ERVTRVASVKANNSGG 1288
E + + ++++ SGG
Sbjct: 535 EFIRNLVTLESGGSGG 550
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 144 (55.7 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 66/256 (25%), Positives = 116/256 (45%)
Query: 1049 VLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIK 1108
++S +D T+K+W++ I + HT V C+++ ++ SGS D T+RVW I+
Sbjct: 354 IISGSTDRTLKVWNA--ETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIE 409
Query: 1109 PEE-IHCLQVHNVKEAVHELTANAEIACFVSPATGVKVYNWSGAIK---HI--NFNKHVK 1162
+ +H L H AV + + VS A V W + H V
Sbjct: 410 TGQCLHVLMGHVA--AVRCVQYDGRRV--VSGAYDFMVKVWDPETETCLHTLQGHTNRVY 465
Query: 1163 SLVMTGDKLYCGCSGYSIQ--EVDLGNLTSTTFYAGTKKLLGKQTIHS-LHMHNGLLFAG 1219
SL G + G SI+ +V+ GN T L G Q++ S + + + +L +G
Sbjct: 466 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT--------LTGHQSLTSGMELKDNILVSG 517
Query: 1220 GSSVDGTAGKVFSISS----KTAVGSFTTGIDIQHLAVNSDFIFTATKCGTIEVW-LK-- 1272
+ D T K++ I + +T G + L N +F+ T++ GT+++W LK
Sbjct: 518 NA--DSTV-KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 574
Query: 1273 ERVTRVASVKANNSGG 1288
E + + ++++ SGG
Sbjct: 575 EFIRNLVTLESGGSGG 590
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 146 (56.5 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 342 KDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSL 393
+D +CPI+ +I DPV +ETG TY+R +I +W GN TCPIT + L S L
Sbjct: 290 EDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTEL 341
Score = 56 (24.8 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 25/127 (19%), Positives = 55/127 (43%)
Query: 892 LCNHEKGSIFKALEEC-LKSNSLEMAKSCLVIAAWLTHMLSTLPDTGVRGTARRSLLDEF 950
L N + I++A+ E +++ + +SCLV A +T +L L +R + + +
Sbjct: 397 LINGGEEMIYRAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIR--IQENAMAGI 454
Query: 951 INVLQSSRNLEEKILTALALKTFISDPVALEELGKYAKCIYGTLRKLKKYSAVVTDIQKA 1010
+N+ + + L + I + A E Y+ L ++ YS ++ + A
Sbjct: 455 LNLSKHVTGKSKIAGEGLKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDA 514
Query: 1011 LMNLSSV 1017
+ L ++
Sbjct: 515 IPGLMNI 521
Score = 45 (20.9 bits), Expect = 7.6e-05, Sum P(3) = 7.6e-05
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 655 KSRSITALSLISANGIPALIKCLDRVEVR---RSIVSILLCCMHADKSCKTLIAKRIELS 711
K+ S L+ A + L+K L V++R ++ IL H + K+ IA L
Sbjct: 417 KTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHV--TGKSKIAGE-GLK 473
Query: 712 HVLDLFHDG 720
++++ ++G
Sbjct: 474 ILVEILNEG 482
Score = 38 (18.4 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 1062 DSGKR-----VLRLIQEVREHTRAVTCLYVPSSGDKLYSGSL 1098
DS KR V+ L+ + H R + VP D L SG +
Sbjct: 529 DSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEI 570
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 141 (54.7 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 32/77 (41%), Positives = 40/77 (51%)
Query: 332 EKMTSRSR-PPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCS 390
E TS R PP+ F+CPIT I DP G TYE +AI W +RG+ T P+ + L
Sbjct: 344 EASTSNHREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPH 403
Query: 391 NSLPKTNYVLKRLITSW 407
SL N L+ I W
Sbjct: 404 TSLVP-NLALRSAIQEW 419
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 142 (55.0 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 38/138 (27%), Positives = 65/138 (47%)
Query: 316 NESDEGSQSCNSLPCSEKMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLK 375
++S + S N+ P+ F C ++ + DPV + +G T+ER IQ+W
Sbjct: 195 HQSIDDSLHANAAEAEASEEHNGTLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFD 254
Query: 376 RGNTTCPITRQPLCSNSLPKTNYVLKRLITSWKEQYPDLAQEFSYSETPKHSFGSSPLK- 434
GN +CPI+++ L +L K N LK I+ W + Q+ KH S+ +
Sbjct: 255 EGNDSCPISKRKLDDFTL-KPNVELKSQISEWCAKNGLDVQD----PARKHVKASNSIDF 309
Query: 435 DMTLASSPSRTFNFHIHN 452
+++AS S +N H+
Sbjct: 310 SVSIASFGSSLYNIPDHS 327
Score = 53 (23.7 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 20/72 (27%), Positives = 36/72 (50%)
Query: 1049 VLSSHSDGTIKMWDSGK--RVLRLIQEVREHTRA---VTCLYVPSSGDK-LYSGSLDKTI 1102
VLS+H G K+ SG +L++++ EH + +T + SS + L SLD
Sbjct: 488 VLSNHPHGPSKITSSGSLSSLLKIVESQAEHLQEQAMITLKNLSSSMEICLEMVSLDFIQ 547
Query: 1103 RVWSIKPEEIHC 1114
++ S +++ C
Sbjct: 548 KLTSFLQQKVFC 559
Score = 49 (22.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 25/122 (20%), Positives = 53/122 (43%)
Query: 506 CETAVLAIARLWKESKGDPGVHAYLLKPTIINGFAEILSASLSREVLRTSVYILSELMVA 565
C+ +++ + L KG + P + AE+L +++ E ++ IL +L V
Sbjct: 559 CKHSIIILKNLCSTEKGRGCITE---TPDCLASIAELLESNVPEEQ-ENAISILLQLCV- 613
Query: 566 DESVGDILTSVDSDFDCLAALLKNGLGEAAVLIYQLRPAFAQLSAHEFIPSLVQLVLNKT 625
+ + ++ CL + + +LI ++SA E + +LV++ +K
Sbjct: 614 -QKI---------EYCCLVVREATDIYSSLILISNNGTEEVKVSASELLRALVEVDSDKE 663
Query: 626 EE 627
EE
Sbjct: 664 EE 665
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 145 (56.1 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 29/67 (43%), Positives = 38/67 (56%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P +F+CPIT +I DPV G +YER+AI+ W+ N T P+T PL +L N L
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPL-QTTLLTPNRTL 476
Query: 401 KRLITSW 407
K I W
Sbjct: 477 KMAIFRW 483
Score = 45 (20.9 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 10/28 (35%), Positives = 21/28 (75%)
Query: 62 YSDQAVLANL-DWGIEALEEAINTSNME 88
+S++ VLA L + G+EA+ +A ++N++
Sbjct: 347 WSEEEVLAWLREEGLEAVTDAFKSNNID 374
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 155 (59.6 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 33/84 (39%), Positives = 48/84 (57%)
Query: 343 DFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVLKR 402
DF CP++ ++ DPV + +GQTYE+ I+ W+ G CP TRQ L +L NY +K
Sbjct: 236 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIP-NYTVKA 294
Query: 403 LITSWKE----QYPDLAQEFSYSE 422
LI +W E + PD + S +E
Sbjct: 295 LIANWCETNDVKLPDPNKSTSLNE 318
Score = 40 (19.1 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 18/81 (22%), Positives = 37/81 (45%)
Query: 590 GLGEAAVLIYQLRPAFAQLSAHEFIPSLVQLVLNKTEEFDELQFVMEPKDAAIEMLEQIL 649
G A VL+ +L + + + +L+ L +N + + + + AIE L +L
Sbjct: 583 GNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNK----KAIADA--GAIEPLIHVL 636
Query: 650 MGGDKKSRSITALSLISANGI 670
G +++ +A +L S + I
Sbjct: 637 ENGSSEAKENSAATLFSLSVI 657
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 137 (53.3 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 342 KDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVLK 401
+DF CPI+ +I DP G TYE + ++WL+ G T P T +PL +++L N+ L+
Sbjct: 235 EDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVP-NHTLR 293
Query: 402 RLITSWKEQYPD 413
+I W E+ P+
Sbjct: 294 IIIKDWLEKNPN 305
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 149 (57.5 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 344 FVCPITGQIFNDPVTLETGQTYERKAIQEWLKR----GNT-TCPITRQPLCSNSLPKTNY 398
F+CP+T ++ +DPVTLE G+T+ER+AI++W K G +CP+T Q L S + +
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDV-SASI 85
Query: 399 VLKRLITSWKEQ 410
L+ I W+ +
Sbjct: 86 ALRNTIEEWRSR 97
Score = 48 (22.0 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 30/142 (21%), Positives = 63/142 (44%)
Query: 950 FINVLQSSRNLEEKILTALALKTFISDPVALEELGKYAKCIY-GTLRKLKKYSAVVTDIQ 1008
F+++LQS+ ++++A+AL+ + + L + Y G++ + VV +
Sbjct: 594 FLHLLQSNGQDNIQMVSAMALENLSLESIKLTRMPDPPPVNYCGSIFSCVRKPHVVNGLC 653
Query: 1009 KALMNLSSVNATE-LWHCNEVTELDSSTNGEVLSLIHLKGRVLSSH-SDGT-----IKMW 1061
K + S+ T L V +L + + E + ++ LSS DG +K+
Sbjct: 654 KIHQGICSLRETFCLVEGGAVEKLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKIL 713
Query: 1062 DSGKRVLRLIQEVREH-TRAVT 1082
D + ++ +RE+ T +T
Sbjct: 714 DEADGIRHILNVLRENRTERLT 735
Score = 48 (22.0 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 38/196 (19%), Positives = 83/196 (42%)
Query: 641 AIEMLEQILMGGDKKSRSITALSLISANGIPALIKCLDRV--EVRRSIVSILLCCMHADK 698
A++ L Q+++ GD +S++I A + + L+K L + R + VS+L ++
Sbjct: 164 ALQTL-QVVVEGDDESKAIVA----EGDTVRTLVKFLSHEPSKGREAAVSLLFELSKSEA 218
Query: 699 SCKTLIAKRIELSHVLDLFHDGNDSVRGICINFLSELVLLNRRTFSN--QILQVIRDEGS 756
C+ + + L ++ L +++V +V RT N + +++R S
Sbjct: 219 LCEKIGSIHGALILLVGLTSSNSENV---------SIVEKADRTLENMERSEEIVRQMAS 269
Query: 757 FSTMHTFLVYLQMAPMEQQPATASXXXXXXXXVEPRKMSMYREEAVEALIEALRRKDFPN 816
+ + L L E + + AS + + + + +L++ +R D P
Sbjct: 270 YGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDVKVL--VAQTVGSSLVDLMRSGDMPQ 327
Query: 817 SQ--MMALDALLSLTG 830
+ + AL+ + S G
Sbjct: 328 REAALKALNKISSFEG 343
Score = 42 (19.8 bits), Expect = 4.0e-05, Sum P(4) = 4.0e-05
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 699 SCKTLIAKRIELSHVLDLFHDGNDSVRGICINFLSELVLLN 739
S K LI+K I + DLF+ G +++ I + +S +L N
Sbjct: 344 SAKVLISKGILPPLIKDLFYVGPNNLP-IRLKEVSATILAN 383
Score = 42 (19.8 bits), Expect = 4.0e-05, Sum P(4) = 4.0e-05
Identities = 24/98 (24%), Positives = 42/98 (42%)
Query: 689 ILLCCMHADKSCKTLIAKR-----IELSH-VLDLFHDGNDSVRGICINFLSELVLLNRRT 742
IL MH + C+T+ + R +L H ++D+ + VR + L V++
Sbjct: 119 ILQALMHVRQICRTIRSNRHGVRNSQLIHMIIDMLKSTSHRVRYKALQTLQ--VVVEGDD 176
Query: 743 FSNQILQVIRDEGSFSTMHTFLVYLQMAPMEQQPATAS 780
S I+ EG T+ T + +L P + + A S
Sbjct: 177 ESKAIVA----EGD--TVRTLVKFLSHEPSKGREAAVS 208
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 1269 VWLKERVTRVASV 1281
VW+ ER+ R+ +
Sbjct: 739 VWMVERILRIEDI 751
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 333 KMTSRSRP-PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSN 391
KM S S P +F+CPIT ++ DPV G +YER+A++ W+ + T P+T L S
Sbjct: 394 KMDSLSSGIPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSL 453
Query: 392 SLPKTNYVLKRLITSWKEQY 411
L N LK I W E +
Sbjct: 454 VLTP-NRTLKMAINRWLETH 472
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 148 (57.2 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 36/94 (38%), Positives = 54/94 (57%)
Query: 320 EGSQSCNSLPCSEKMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLK--RG 377
+GSQS NS S+ + F+CP+T Q+ ++PVTLE GQT+ER+AI++W + R
Sbjct: 8 DGSQSDNS---SQFEPGIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRE 64
Query: 378 N---TTCPITRQPLCSNSLPKTNYVLKRLITSWK 408
N +CPIT + L L + L+ I W+
Sbjct: 65 NGQPLSCPITSKELSITDL-SPSIALRNTIEEWR 97
Score = 50 (22.7 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 20/91 (21%), Positives = 46/91 (50%)
Query: 615 PSLVQLVLNKTEEFDELQFVMEPKDAAIEMLEQILMGGDKKSRSITALSLISANGIPALI 674
P LV+L+ + + E + A++ L Q+++ GD++S++I A + + ++
Sbjct: 145 PQLVRLITDMLKSSSH-----EVRCKALQTL-QVVVEGDEESKAIVA----EGDTVRTIV 194
Query: 675 KCLDRV--EVRRSIVSILLCCMHADKSCKTL 703
K L + + R + VS+L ++ C+ +
Sbjct: 195 KFLSQEPSKGREAAVSVLFELSKSEALCEKI 225
Score = 46 (21.3 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 32/144 (22%), Positives = 56/144 (38%)
Query: 708 IELSHVLDLFHDGNDSVRGICINFLSELVLLNRRTFSNQILQVIRDEGSFSTMHTFLVYL 767
I L +++ H+ ND +R I L + +N + + GS + +
Sbjct: 457 ISLVQFVEI-HE-NDDLRLASIKLLHNISPHMSEELANALRSTVGQLGSLVS-----IIS 509
Query: 768 QMAPM--EQQPATASXXXXXXXXVEPRKMSMYREEAVEALIE---ALRRKDFPNSQMMA- 821
+ P E+Q A A M + RE A E +I +R+ + +
Sbjct: 510 ENTPTITEEQAAAAGLLAELPERDLVLTMRLLREGAFEKIISKIVGIRQGEIRGIRFERT 569
Query: 822 -LDALLSLTGRFTFSGKSYTEALL 844
L+ L+S+ R TF+ T+A L
Sbjct: 570 FLEGLVSILARITFALTKETDATL 593
Score = 41 (19.5 bits), Expect = 4.3e-05, Sum P(4) = 4.3e-05
Identities = 20/68 (29%), Positives = 29/68 (42%)
Query: 1138 SPATGVKVYNWSGAIKHINFNKHVKSLVM--TGDKLY--CGCSGYSIQEVDLGNLTSTTF 1193
SP T V + + G + N VK +V G L S +E LG L + +
Sbjct: 286 SPETKVSMAFYLGVLA---LNNDVKVIVAQTVGSSLIDLMRTRDMSQREAALGALNNISS 342
Query: 1194 YAGTKKLL 1201
+ G+ KLL
Sbjct: 343 FEGSAKLL 350
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 1269 VWLKERVTRVASV 1281
VW+ ER+ R+ +
Sbjct: 749 VWMVERILRIEEI 761
Score = 37 (18.1 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 16/66 (24%), Positives = 27/66 (40%)
Query: 672 ALIKCLDRVEVRRSIVSILL-CCMHADKSCKTLIAKRIELSHVLDLFHDGNDSVRGICIN 730
++ CL + V I I C + C + + + ++DL ND V G +
Sbjct: 648 SIFSCLSKPPVVLGICKIHQGICSVRESFC---LVEGQAVDKLVDLLDHENDKVVGPALA 704
Query: 731 FLSELV 736
LS L+
Sbjct: 705 ALSTLL 710
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 137 (53.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 73/302 (24%), Positives = 129/302 (42%)
Query: 1003 VVTDIQ---KALMNLSSVNATELWHCNEVTE----LDSSTNGEVLSLIHLKGR-VLSSHS 1054
V+T +Q L+ S N ++W C + E L T G S I GR ++S +
Sbjct: 258 VITCMQIHDDVLVTGSDDNTLKVW-CIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGST 316
Query: 1055 DGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEEIHC 1114
D T+K+W + L+ ++ HT V C+ + +G L +GS D T+RVW ++ H
Sbjct: 317 DRTVKVWSTVDG--SLLHTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGR-HL 371
Query: 1115 LQVHNVKEAVHELTANAEIACFVSPATGVKVYN-WSG-AIKHIN-FNKHVKSLVMTGDKL 1171
+H AV + + VK++N +G I+ + N V SL+ ++
Sbjct: 372 ATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERS 431
Query: 1172 YCGCSGYSIQEVDLGNLTSTTFYAGTKKLLGKQTIHS-LHMHNGLLFAGGSSVDGTAGKV 1230
CSG + + + T L G ++ S + + +L + + D +V
Sbjct: 432 IV-CSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVS--CNADSHV-RV 487
Query: 1231 FSISSKTAV----GSFTTGIDIQHLAVNSDFIFTATKCGTIEVWLKERVTRVASVKANNS 1286
+ I T V G + +Q N + T++ GT+++W ER + + +S
Sbjct: 488 WDIHEGTCVHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLWDIERGALIRDLVTLDS 545
Query: 1287 GG 1288
GG
Sbjct: 546 GG 547
Score = 52 (23.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 22/90 (24%), Positives = 41/90 (45%)
Query: 404 ITSWKEQYPDLAQEFSYSETPKHSFG------SSPLKD-MTLASSPSRTFNFHIHNNTDD 456
+T +Y D +E SYS S+ S PL+ + L++SPSR + N +
Sbjct: 22 VTDNDMEYNDNGEESSYSNGSSSSYNADKLSSSRPLQHKLDLSASPSRNNDL---NPRVE 78
Query: 457 HINERRKRFTQAANATSPTSVISQASVETI 486
H+ K + A + T ++ ++++ I
Sbjct: 79 HLIALFKDLSSAEQMDAFTRLLQESNMTNI 108
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 137 (53.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 73/302 (24%), Positives = 129/302 (42%)
Query: 1003 VVTDIQ---KALMNLSSVNATELWHCNEVTE----LDSSTNGEVLSLIHLKGR-VLSSHS 1054
V+T +Q L+ S N ++W C + E L T G S I GR ++S +
Sbjct: 258 VITCMQIHDDVLVTGSDDNTLKVW-CIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGST 316
Query: 1055 DGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEEIHC 1114
D T+K+W + L+ ++ HT V C+ + +G L +GS D T+RVW ++ H
Sbjct: 317 DRTVKVWSTVDG--SLLHTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGR-HL 371
Query: 1115 LQVHNVKEAVHELTANAEIACFVSPATGVKVYN-WSG-AIKHIN-FNKHVKSLVMTGDKL 1171
+H AV + + VK++N +G I+ + N V SL+ ++
Sbjct: 372 ATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERS 431
Query: 1172 YCGCSGYSIQEVDLGNLTSTTFYAGTKKLLGKQTIHS-LHMHNGLLFAGGSSVDGTAGKV 1230
CSG + + + T L G ++ S + + +L + + D +V
Sbjct: 432 IV-CSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVS--CNADSHV-RV 487
Query: 1231 FSISSKTAV----GSFTTGIDIQHLAVNSDFIFTATKCGTIEVWLKERVTRVASVKANNS 1286
+ I T V G + +Q N + T++ GT+++W ER + + +S
Sbjct: 488 WDIHEGTCVHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLWDIERGALIRDLVTLDS 545
Query: 1287 GG 1288
GG
Sbjct: 546 GG 547
Score = 52 (23.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 22/90 (24%), Positives = 41/90 (45%)
Query: 404 ITSWKEQYPDLAQEFSYSETPKHSFG------SSPLKD-MTLASSPSRTFNFHIHNNTDD 456
+T +Y D +E SYS S+ S PL+ + L++SPSR + N +
Sbjct: 22 VTDNDMEYNDNGEESSYSNGSSSSYNADKLSSSRPLQHKLDLSASPSRNNDL---NPRVE 78
Query: 457 HINERRKRFTQAANATSPTSVISQASVETI 486
H+ K + A + T ++ ++++ I
Sbjct: 79 HLIALFKDLSSAEQMDAFTRLLQESNMTNI 108
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 150 (57.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 299 SAVLKSKSNMRGPSSPCNESDEGSQSCNSLPCSEKMTSRSRPPKDFVCPITGQIFNDPVT 358
+ VL+ M+ P P +E+ S + ++P RPP ++CPI ++ DP+
Sbjct: 704 AVVLRFIDRMKAPEVPSSETS--SYANQNVP--------RRPPSHYLCPIFQEVMKDPLI 753
Query: 359 LETGQTYERKAIQEWLKRGNTTCPITRQPL--CSNSLPKTNYVLKRLITSWKEQY 411
G TYE +AI+EWL G+ T P+T + C N +P N+ L I W+ Q+
Sbjct: 754 AADGFTYEAEAIREWLANGHDTSPMTNLKMEDC-NLIP--NHALHLAIQDWQNQW 805
Score = 42 (19.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 80 EAINTSNMETKLARLDYAEKM 100
+ +NTSN+E K D A K+
Sbjct: 270 DTLNTSNVEEKEREGDVARKV 290
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 161 (61.7 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 69/254 (27%), Positives = 119/254 (46%)
Query: 1049 VLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIK 1108
++S +D T+K+WD + ++ HT V C+++ G K+ SGS D T+RVW I+
Sbjct: 1048 IISGSTDRTLKVWDMDSGAC--VHTLQGHTSTVRCMHL--HGSKVVSGSRDATLRVWDIE 1103
Query: 1109 PEE-IHCLQVHNVKEAVHELTANAEIACFVSPATGVKVYNWSGAIK---HI--NFNKHVK 1162
+H L H AV + + ++ VS A V W + H V
Sbjct: 1104 QGSCLHVLVGHLA--AVRCVQYDGKL--IVSGAYDYMVKIWHPERQECLHTLQGHTNRVY 1159
Query: 1163 SLVMTGDKLYCGCSGYSIQ--EVDLGNLTSTTFYAGTKKLLGKQTIHS-LHMHNGLLFAG 1219
SL G + G SI+ +V+ GN T L+G Q++ S + + +L +G
Sbjct: 1160 SLQFDGLHVVSGSLDTSIRVWDVETGNCKHT--------LMGHQSLTSGMELRQNILVSG 1211
Query: 1220 GSSVDGTAGKVFSISSKTAVGSFTTGIDIQHLAV-----NSDFIFTATKCGTIEVWLKER 1274
+ D T KV+ I++ + + + G + H AV NS F+ T++ GT+++W +
Sbjct: 1212 NA--DSTV-KVWDITTGQCLQTLS-GPNKHHSAVTCLQFNSRFVVTSSDDGTVKLWDVKT 1267
Query: 1275 VTRVASVKANNSGG 1288
+ ++ A +SGG
Sbjct: 1268 GDFIRNLVALDSGG 1281
Score = 43 (20.2 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 297 GFSAVLKSKSNMRGPSSPCNESDEGSQSCNSLPCSEKMTSRSRPPKDFVCPIT 349
G S S S R SS ++S E S SC ++ T+ + + P T
Sbjct: 459 GSSLGASSCSQHRSGSSSTSKSMESSTSCTGAARTDVYTNTNSNDYPSLAPTT 511
Score = 41 (19.5 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 10/52 (19%), Positives = 25/52 (48%)
Query: 934 PDTGVRGTARRSLLDEFINVLQSSRNLEEKILTALALKTFISDPVALEELGK 985
P +GV R+ + +F + +SS++L + ++ + ++ LG+
Sbjct: 778 PGSGVSDNCRKRIAYDFASTPRSSQHLGPTAVLSVTPSSHLTSSTPGSALGR 829
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 144 (55.7 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 66/256 (25%), Positives = 116/256 (45%)
Query: 1049 VLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIK 1108
++S +D T+K+W++ I + HT V C+++ ++ SGS D T+RVW I+
Sbjct: 434 IISGSTDRTLKVWNA--ETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIE 489
Query: 1109 PEE-IHCLQVHNVKEAVHELTANAEIACFVSPATGVKVYNWSGAIK---HI--NFNKHVK 1162
+ +H L H AV + + VS A V W + H V
Sbjct: 490 TGQCLHVLMGHVA--AVRCVQYDGRRV--VSGAYDFMVKVWDPETETCLHTLQGHTNRVY 545
Query: 1163 SLVMTGDKLYCGCSGYSIQ--EVDLGNLTSTTFYAGTKKLLGKQTIHS-LHMHNGLLFAG 1219
SL G + G SI+ +V+ GN T L G Q++ S + + + +L +G
Sbjct: 546 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT--------LTGHQSLTSGMELKDNILVSG 597
Query: 1220 GSSVDGTAGKVFSISS----KTAVGSFTTGIDIQHLAVNSDFIFTATKCGTIEVW-LK-- 1272
+ D T K++ I + +T G + L N +F+ T++ GT+++W LK
Sbjct: 598 NA--DSTV-KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 654
Query: 1273 ERVTRVASVKANNSGG 1288
E + + ++++ SGG
Sbjct: 655 EFIRNLVTLESGGSGG 670
Score = 46 (21.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 27 QDRLINQEERTQHKEQCAERLAAEDGSNDKDSEFRYSDQA 66
+D NQEE+ + +E E+ ++ + D E DQ+
Sbjct: 89 EDSSGNQEEQEEDEEHAGEQDEEDEEEEEMDQESDDFDQS 128
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 144 (55.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 66/256 (25%), Positives = 116/256 (45%)
Query: 1049 VLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIK 1108
++S +D T+K+W++ I + HT V C+++ ++ SGS D T+RVW I+
Sbjct: 439 IISGSTDRTLKVWNA--ETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIE 494
Query: 1109 PEE-IHCLQVHNVKEAVHELTANAEIACFVSPATGVKVYNWSGAIK---HI--NFNKHVK 1162
+ +H L H AV + + VS A V W + H V
Sbjct: 495 TGQCLHVLMGHVA--AVRCVQYDGRRV--VSGAYDFMVKVWDPETETCLHTLQGHTNRVY 550
Query: 1163 SLVMTGDKLYCGCSGYSIQ--EVDLGNLTSTTFYAGTKKLLGKQTIHS-LHMHNGLLFAG 1219
SL G + G SI+ +V+ GN T L G Q++ S + + + +L +G
Sbjct: 551 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT--------LTGHQSLTSGMELKDNILVSG 602
Query: 1220 GSSVDGTAGKVFSISS----KTAVGSFTTGIDIQHLAVNSDFIFTATKCGTIEVW-LK-- 1272
+ D T K++ I + +T G + L N +F+ T++ GT+++W LK
Sbjct: 603 NA--DSTV-KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 659
Query: 1273 ERVTRVASVKANNSGG 1288
E + + ++++ SGG
Sbjct: 660 EFIRNLVTLESGGSGG 675
Score = 46 (21.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 27 QDRLINQEERTQHKEQCAERLAAEDGSNDKDSEFRYSDQA 66
+D NQEE+ + +E E+ ++ + D E DQ+
Sbjct: 94 EDSSGNQEEQEEDEEHAGEQDEEDEEEEEMDQESDDFDQS 133
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 140 (54.3 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 338 SRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCS-NSLPKT 396
S+PP F CP+ + +P G TY+R+AI+EW++ T+ P+T PL + N LP
Sbjct: 747 SQPPSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWMENHRTS-PVTNSPLQNVNLLP-- 803
Query: 397 NYVLKRLITSWKEQ 410
N+ L I W+ +
Sbjct: 804 NHTLYAAIVEWRNR 817
>TAIR|locus:2131799 [details] [associations]
symbol:ZFWD1 "zinc finger WD40 repeat protein 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR000571
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00642
PROSITE:PS50082 PROSITE:PS50103 PROSITE:PS50294 SMART:SM00320
SMART:SM00356 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AL079350
EMBL:AJ252063 EMBL:BT026122 IPI:IPI00530759 RefSeq:NP_194274.2
UniGene:At.32255 ProteinModelPortal:Q9FNZ2 SMR:Q9FNZ2 IntAct:Q9FNZ2
STRING:Q9FNZ2 PRIDE:Q9FNZ2 EnsemblPlants:AT4G25440.1 GeneID:828649
KEGG:ath:AT4G25440 GeneFarm:3766 TAIR:At4g25440
HOGENOM:HOG000239729 InParanoid:Q9FNZ2 OMA:WNTQTNT PhylomeDB:Q9FNZ2
ProtClustDB:CLSN2687444 Genevestigator:Q9FNZ2 Uniprot:Q9FNZ2
Length = 430
Score = 136 (52.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 57/215 (26%), Positives = 99/215 (46%)
Query: 1061 WDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNV 1120
W G L+ ++ H + VT + +PS DKLY+ S D+T+R+W + C V N+
Sbjct: 128 WSKGDS-FSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQ--CTGVLNL 184
Query: 1121 KEAVHELTANAEIACFVSPATGVKVYN-WSGAIKHINFNK-HVKSLVMTGDKLYCGCSGY 1178
V + + P VK +N + A +N V SLV+ D L+ G
Sbjct: 185 GGEVGCIISEGPWLLVGMPNL-VKAWNIQNNADLSLNGPVGQVYSLVVGTDLLFAGTQDG 243
Query: 1179 SIQEVDLGNLTSTTFYAGTKKLLGKQ-TIHSLHMHNGLLFAGGSSVDGTAGKVFSISSKT 1237
SI V N T++ F LLG + SL++ L++G ++D + KV+S+ +
Sbjct: 244 SIL-VWRYNSTTSCFDPAAS-LLGHTLAVVSLYVGANRLYSG--AMDNSI-KVWSLDNLQ 298
Query: 1238 AVGSFT--TGIDIQHLAVNSDFIFTATKCGTIEVW 1270
+ + T T + + L F+ + + T+++W
Sbjct: 299 CIQTLTEHTSV-VMSLICWDQFLLSCSLDNTVKIW 332
Score = 133 (51.9 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 58/221 (26%), Positives = 96/221 (43%)
Query: 1018 NATELWHCNEVTELD-SSTNGEVLSLIHLKGRVLSSHSDGTIKMW--DSGKRVLRLIQEV 1074
N + W+ +L + G+V SL+ + + DG+I +W +S +
Sbjct: 204 NLVKAWNIQNNADLSLNGPVGQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFDPAASL 263
Query: 1075 REHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEEIHCLQ-VHNVKEAVHELTANAEI 1133
HT AV LYV ++LYSG++D +I+VWS+ + + C+Q + V L +
Sbjct: 264 LGHTLAVVSLYV--GANRLYSGAMDNSIKVWSL--DNLQCIQTLTEHTSVVMSLICWDQF 319
Query: 1134 ACFVSPATGVKVYNWS-GAIKHINFNKHVKS---LVMTG--DK-----LYCGCSGYSIQE 1182
S VK++ + G + + H + L + G D L C C+ S+
Sbjct: 320 LLSCSLDNTVKIWAATEGGNLEVTYT-HKEEYGVLALCGVHDAEAKPVLLCSCNDNSLHL 378
Query: 1183 VDLGNLTSTTFYAGTKKLLGKQTIHSLHMH-NGLLFAGGSS 1222
DL + T G K+L KQ I S+ + G+ F G S
Sbjct: 379 YDLPSFTER----G--KILAKQEIRSIQIGPGGIFFTGDGS 413
Score = 37 (18.1 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 192 AIPDSSDLSFTADLDQ 207
A+P SD +TA D+
Sbjct: 151 ALPSGSDKLYTASKDE 166
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 136 (52.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P +F+CPIT ++ DPV G +YER+A++ W+ + T P+T L S L N L
Sbjct: 405 PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTP-NRTL 463
Query: 401 KRLITSWKEQY 411
K I W E +
Sbjct: 464 KMAINRWLETH 474
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 135 (52.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P +F+CPIT ++ DPV G +YE++A++ W+ + P+T PL S L N L
Sbjct: 405 PDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLPSLVLTP-NRTL 463
Query: 401 KRLITSWKE 409
K I+ W E
Sbjct: 464 KMAISRWLE 472
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 135 (52.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 335 TSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLP 394
T S P +F+CPIT ++ DP+ G +YE++A++ W+ R T P+T L S L
Sbjct: 398 TLSSEIPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILT 457
Query: 395 KTNYVLKRLITSW 407
N LK I W
Sbjct: 458 P-NRTLKMAIDRW 469
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 135 (52.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 335 TSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLP 394
T S P +F+CPIT ++ DP+ G +YE++A++ W+ R T P+T L S L
Sbjct: 399 TLSSEIPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILT 458
Query: 395 KTNYVLKRLITSW 407
N LK I W
Sbjct: 459 P-NRTLKMAIDRW 470
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 111 (44.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 32/92 (34%), Positives = 48/92 (52%)
Query: 1022 LWHCNE--VTELDSSTNGEVLSL-IHLKGRVLSSHS-DGTIKMWDSGKRVLRLIQEVREH 1077
LW + L + G VLSL G+ L+S D +K+WD L +E+R H
Sbjct: 6 LWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTL--FKELRGH 63
Query: 1078 TRAVTCL-YVPSSGDKLYSGSLDKTIRVWSIK 1108
T ++T L + P SG + S S+D ++RVW I+
Sbjct: 64 TDSITSLAFSPDSG-LIASASMDNSVRVWDIR 94
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 134 (52.2 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P +F+CPIT ++ DPV G +YE++A++ W+ + T P+T L S L N L
Sbjct: 405 PDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTP-NRTL 463
Query: 401 KRLITSWKEQY 411
K I W E +
Sbjct: 464 KMAINRWLETH 474
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 134 (52.2 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 34/100 (34%), Positives = 52/100 (52%)
Query: 329 PCSEKMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPL 388
P + + S P F+CPI+ +I DP G TYE +AI+ W RG I+R P+
Sbjct: 424 PYLQSASGDSSVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRG-----ISRSPM 478
Query: 389 CSNSLPKTNYVLKRLITSW-----KEQYPDLAQEFSYSET 423
+ +LP N V R++ S+ ++Q P+ A + SET
Sbjct: 479 TNLALPNLNLVPNRVLRSFIHGYLQQQQPNPAYQQQLSET 518
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 138 (53.6 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 332 EKMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSN 391
E +S PK+F C ++ I DPV + +GQTYE++ I EWL + TCP +Q L
Sbjct: 66 ESDSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNH-DLTCPTAKQVLYRV 124
Query: 392 SLPKTNYVLKRLITSW 407
L N+++ LIT W
Sbjct: 125 CLTP-NHLINELITRW 139
Score = 42 (19.8 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 670 IPALIKCLDR--VEVRRSIVSILLCCMHADKSCKTLIAKRIELSHVLDLFHDGND 722
IP L K + + V RR+ L D + K +I + L ++DL + +D
Sbjct: 260 IPLLAKSMKQGSVVTRRNATLTLASLSDIDSN-KIIIGNSVALKALIDLIGELDD 313
Score = 38 (18.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 457 HINERRKRFTQ-AANAT-SPTS-VISQASVETIINGLKPYVTCLCTSENLQECETAVLAI 513
+I RR F AA A SP VI + + +I L ++ L + + CE AV+ +
Sbjct: 350 NIKARRNLFESLAALALISPHERVIQEVANLGVIYDL---LSILRKTSCMVTCENAVVIV 406
Query: 514 ARLWKESK 521
++ +S+
Sbjct: 407 GNMYAKSR 414
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 132 (51.5 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 77/319 (24%), Positives = 135/319 (42%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSN-SLPKTNYV 399
PK+F+C ++ +I +P+ + +GQT+E+ I EWLK TCP T+Q L +P N++
Sbjct: 66 PKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKH-ERTCPRTKQVLYHRFMIP--NHL 122
Query: 400 LKRLITSWKEQYPDLAQEFSYSETPKHSFGSSPLKDMTLASSPSRTFNFHIHNNTDDHIN 459
+ +I W L F + PK S + D+ S ++ +D
Sbjct: 123 INEVIKEWC-----LIHNF---DRPKTS---DEVIDLFTGDLESLLQRISSPSSVEDQ-T 170
Query: 460 ERRKRFTQAANATSPTSVISQASV-ETIINGLKPY-VTCLCTSENLQECETA--VLAIAR 515
E K A S V A + ++I L P ++ E L+ TA + + +
Sbjct: 171 EAAKELALKAKRFSSVCVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIFSTSE 230
Query: 516 LWKESKGD-----PGVHAYLLKPTI---INGFAEILSASL--SREVLRTSVYILSELMVA 565
K + P + Y+ + T+ I+ A + S S S +++ + +L L+
Sbjct: 231 KNKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTDSNKIIIGNSEVLKALIHV 290
Query: 566 DESVGDILTSVDSDFDCLAALLK-NGLGEAAVLIYQLRPAFAQLSAHEFIPSLVQLVL-- 622
E GD L + ++ F L+ L + E AV +R A ++ A + L+ L+
Sbjct: 291 IEE-GDSLATSEA-FSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSNVSMLLSLLAFV 348
Query: 623 -----NKTEEFDELQFVME 636
TEE D L + +
Sbjct: 349 STQNHQTTEEMDNLGLIYD 367
>TAIR|locus:2010157 [details] [associations]
symbol:AT1G49450 "AT1G49450" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC007504
ProtClustDB:CLSN2681936 IPI:IPI00540218 PIR:B96531
RefSeq:NP_175369.1 UniGene:At.28389 ProteinModelPortal:Q9XIB2
SMR:Q9XIB2 STRING:Q9XIB2 PRIDE:Q9XIB2 EnsemblPlants:AT1G49450.1
GeneID:841369 KEGG:ath:AT1G49450 TAIR:At1g49450 InParanoid:Q9XIB2
OMA:WEREKHL PhylomeDB:Q9XIB2 Genevestigator:Q9XIB2 Uniprot:Q9XIB2
Length = 471
Score = 119 (46.9 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 49/179 (27%), Positives = 80/179 (44%)
Query: 1071 IQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEE-IHCLQVHNVKEAVHELTA 1129
+ ++R H AV+CL + LYSGS DKT++VW + + + ++ H+ +AV+ + +
Sbjct: 239 VLKIR-HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHD--DAVNTVVS 295
Query: 1130 NAEIACFVSPATG-VKVYNWSGAIKHINFNKHVKSLVMTGDKLYCGCSGYSIQE--VDLG 1186
+ F A G +KV W ++ KHV V+ + ++ + V G
Sbjct: 296 GFDDLVFTGSADGTLKV--WKREVQGKEM-KHVLVQVLMKQENAVTALAVNLTDAVVYCG 352
Query: 1187 NLTSTT-FYAGTKKLLGKQTIHSLHMHNGLLFAGGSSV-DGTAGKVFSISSKTAVGSFT 1243
+ T F+ K L K TIH M L GS + G A K + + GS T
Sbjct: 353 SSDGTVNFWERQKYLTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKRNGDGSHT 411
Score = 62 (26.9 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 1034 STNGEVLSLIHLK-GRVLSSHSDGTIKMWDSGKR 1066
ST+G V +++ + RV + H DG I++W K+
Sbjct: 170 STSGFVKAIVVTRDNRVFTGHQDGKIRVWRGSKK 203
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 132 (51.5 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P +F+CPIT ++ DPV G +YE++A++ W+ + T P+T L S L N L
Sbjct: 405 PDEFLCPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLILPSMVLTP-NRTL 463
Query: 401 KRLITSWKEQY 411
K I+ W E +
Sbjct: 464 KMAISRWLETH 474
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 141 (54.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 331 SEKMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCS 390
S++ + +PP F+CPI+ ++ +P G TYE ++++EWL G+ T P+T L
Sbjct: 488 SDEDSVTRQPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAH 547
Query: 391 NSLPKTNYVLKRLITSWKEQ 410
N+L N+ L+ I W ++
Sbjct: 548 NNLVP-NHALRSAIQEWLQR 566
Score = 40 (19.1 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 33 QEERTQHKEQCAERLAAEDGSND-----KDSEFRYSDQAVLANLDWGIEAL 78
+E + + E+C R AE+ + + ++ E Y+++A L G EAL
Sbjct: 238 EESKREAYEECVRRFKAENTAVEAIRSAREYEAMYNEEAKLRKE--GKEAL 286
>DICTYBASE|DDB_G0283581 [details] [associations]
symbol:utp15 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0006364 "rRNA processing"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IEA] [GO:0030515
"snoRNA binding" evidence=ISS] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0283581 GO:GO:0005730
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0030515 eggNOG:COG2319 EMBL:AAFI02000055 GO:GO:0006364
GO:GO:0005732 KO:K14549 RefSeq:XP_639030.1
ProteinModelPortal:Q54QV4 STRING:Q54QV4 PRIDE:Q54QV4
EnsemblProtists:DDB0237554 GeneID:8624158 KEGG:ddi:DDB_G0283581
InParanoid:Q54QV4 OMA:ADTAYGV Uniprot:Q54QV4
Length = 529
Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
Identities = 77/314 (24%), Positives = 130/314 (41%)
Query: 998 KKYSAVVTDIQKALMNLSSV-----NATELWHCN----EVTELDSSTNGEVLSLIHLKGR 1048
KKYS+++T ++ +N V N + N E E+ S + + G+
Sbjct: 36 KKYSSMITRVESNPINSKEVCVTFGNCVRIITSNSKKVEEREITSFRDTPYGASYRDDGK 95
Query: 1049 -VLSSHSDGTIKMWD-SGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWS 1106
++ D IK+ D S K LR Q HT + C G L SGS D T+R W+
Sbjct: 96 LIVVGGEDPIIKLIDVSSKNTLRKFQG---HTGGIQCTRFIEKGS-LISGSNDNTVRTWA 151
Query: 1107 IKP-EEIHCLQVHNVKEAVHELTANAEIACFVSPATG----VKVYNWSG-----AIKHIN 1156
I+ E++ + H K+ VH +T + + G VK+++ G + ++
Sbjct: 152 IETGEQLQMVGKH--KDKVHCMTRHPTNGDNIWMTGGYDHCVKLWDIRGNKTQSSTITLD 209
Query: 1157 FNKHVKSLVMTGDK--LYCGCSGYSIQEVDLGN-LTSTTFYAGTKKLLGKQTIHSLHMHN 1213
V+ L+M G + G + DL N T Y GT + +++ S+H+ N
Sbjct: 210 HGAPVEDLIMLGASGTMAISVGGNYFKVWDLLNGSTGKQVYQGTHSM---KSLTSIHLSN 266
Query: 1214 GLLFAGGSSVDGTAGKVFSISSKTAVGSFTTGIDIQHLA-VNSDFIFTATKCGTIEVWLK 1272
S +D T +VFS S + + S+ + L +N I + GT+ K
Sbjct: 267 SKDRFITSGLDHTV-RVFSTQSYSLINSYEFSEPLLSLTLINDRKIIAGSAKGTLFYARK 325
Query: 1273 ERVTRVASVKANNS 1286
++ K +NS
Sbjct: 326 TNPITISKAKLSNS 339
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 133 (51.9 bits), Expect = 0.00012, P = 0.00012
Identities = 28/70 (40%), Positives = 39/70 (55%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P F CPIT + +P G TYE++AI+EWL++ N P+T P S+SL N+ L
Sbjct: 726 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQK-NHKSPMTDLPFPSDSL-LPNHSL 783
Query: 401 KRLITSWKEQ 410
I W+ Q
Sbjct: 784 LSAIKEWRSQ 793
>TAIR|locus:2164456 [details] [associations]
symbol:AT5G40880 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR000571 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00642 PROSITE:PS50082 PROSITE:PS50103
PROSITE:PS50294 SMART:SM00320 SMART:SM00356 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB011477 HOGENOM:HOG000239729 EMBL:BT030400 EMBL:AJ252065
IPI:IPI00524162 RefSeq:NP_198904.1 UniGene:At.25457
UniGene:At.30265 ProteinModelPortal:Q9FKR9 SMR:Q9FKR9 STRING:Q9FKR9
PRIDE:Q9FKR9 EnsemblPlants:AT5G40880.1 GeneID:834089
KEGG:ath:AT5G40880 GeneFarm:3785 TAIR:At5g40880 InParanoid:Q9FKR9
OMA:AALEGHK PhylomeDB:Q9FKR9 ProtClustDB:CLSN2686199
Genevestigator:Q9FKR9 Uniprot:Q9FKR9
Length = 472
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 61/219 (27%), Positives = 102/219 (46%)
Query: 1037 GEVLSLIHLKGRVLSSHSDGTIKMW---DSGKRVLRLIQEVR-EHTRAVTCLYVPSSGDK 1092
G+V ++ G + + S G+I +W DS + + + H+ VTC V G+
Sbjct: 267 GQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVV--GGEV 324
Query: 1093 LYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHELTAN-AEIACFVSPATGVKVYNWS-- 1149
LYSGS+DKTI+VW + + C +K+ + +T+ C +S + + W+
Sbjct: 325 LYSGSVDKTIKVWDLNT--LQCRMT--LKQHIGTVTSLLCWDKCLISSSLDGTIKLWACS 380
Query: 1150 --GAIKHINFNKHVKSL-VMTG--D---KLYCGCSGYSIQEVDLGNLTSTTFYAGTKKLL 1201
++K + K S+ + G D K CS Y V + +L S + K+
Sbjct: 381 ENESLKVVQTRKQELSVHTLCGMHDAEAKPIMFCS-YQNGAVGIFDLPS---FEERGKMF 436
Query: 1202 GKQTIHSLHMH-NGLLFAGGSSVDGTAGKVFSISSKTAV 1239
QTI +L + GLLF+G S G +V+S++S T V
Sbjct: 437 STQTICTLTIGPGGLLFSGDKS--GNL-RVWSLASGTKV 472
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 340 PPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCS-NSLPKTNY 398
PP+ F+CPI+ I +P G TYE + WL G P+T L + N +P N
Sbjct: 294 PPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIP--NL 351
Query: 399 VLKRLITSWKEQYP 412
VL+ I W +Q+P
Sbjct: 352 VLRSAIKDWLQQHP 365
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 131 (51.2 bits), Expect = 0.00013, P = 0.00013
Identities = 60/235 (25%), Positives = 104/235 (44%)
Query: 1049 VLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIK 1108
++S +D T+K+W++ I + HT V C+++ ++ SGS D T+RVW I+
Sbjct: 356 IISGSTDRTLKVWNA--ETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIE 411
Query: 1109 PEE-IHCLQVHNVKEAVHELTANAEIACFVSPATGVKVYNWSGAIK---HI--NFNKHVK 1162
+ +H L H AV + + VS A V W + H V
Sbjct: 412 TGQCLHVLMGHVA--AVRCVQYDGRRV--VSGAYDFMVKVWDPETETCLHTLQGHTNRVY 467
Query: 1163 SLVMTGDKLYCGCSGYSIQ--EVDLGNLTSTTFYAGTKKLLGKQTIHS-LHMHNGLLFAG 1219
SL G + G SI+ +V+ GN T L G Q++ S + + + +L +G
Sbjct: 468 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT--------LTGHQSLTSGMELKDNILVSG 519
Query: 1220 GSSVDGTAGKVFSISS----KTAVGSFTTGIDIQHLAVNSDFIFTATKCGTIEVW 1270
+ D T K++ I + +T G + L N +F+ T++ GT+++W
Sbjct: 520 NA--DSTV-KIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLW 571
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 135 (52.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/80 (40%), Positives = 45/80 (56%)
Query: 1046 KGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVW 1105
K R+ SS DGTIK+WD+ RV + HT +V+C+ G LYSGS D+T+RVW
Sbjct: 248 KPRLASSSKDGTIKIWDTVSRVCQYTMS--GHTNSVSCVKWGGQG-LLYSGSHDRTVRVW 304
Query: 1106 SIKPEEIHCLQVHNVKEAVH 1125
I + C+ + +K H
Sbjct: 305 DINSQG-RCINI--LKSHAH 321
Score = 43 (20.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 335 TSRSRPPKDFVCPITGQIFNDPV-TLE-TGQTY 365
TS P F C I G+ +DPV T++ T Y
Sbjct: 70 TSDDPVPYTFSCTIQGKKASDPVKTIDITDNLY 102
>TAIR|locus:2170061 [details] [associations]
symbol:AT5G50120 "AT5G50120" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0009733 "response to auxin stimulus" evidence=RCA]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB026650
HOGENOM:HOG000236376 IPI:IPI00531222 RefSeq:NP_199823.1
UniGene:At.9028 ProteinModelPortal:Q9FG99 SMR:Q9FG99 STRING:Q9FG99
EnsemblPlants:AT5G50120.1 GeneID:835077 KEGG:ath:AT5G50120
TAIR:At5g50120 InParanoid:Q9FG99 OMA:RTLKIWR PhylomeDB:Q9FG99
ProtClustDB:CLSN2916602 Genevestigator:Q9FG99 Uniprot:Q9FG99
Length = 388
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 37/107 (34%), Positives = 56/107 (52%)
Query: 1013 NLSSVNATELWHCNEVTELDSSTNG-EVLSLIHLKGRVL-SSHSDGTIKMW--DSGKRVL 1068
N++ N + + V L +G L+L G +L S SDG+I +W D G ++
Sbjct: 237 NINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIV 296
Query: 1069 RLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEEIHCL 1115
++ +R HT +V CL V S D L SGS DKT+R+W ++ CL
Sbjct: 297 -VVGMLRGHTESVLCLAVVS--DILCSGSADKTVRLWKCSAKDYSCL 340
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 44/163 (26%), Positives = 78/163 (47%)
Query: 994 LRKLKKYSAVVTDIQKA-----LMNLSSVNAT-ELWHCNEVTELDSSTNG-EVLSLIH-- 1044
+++LK +++ V A L+ S + T +LW + + + N +VL++
Sbjct: 144 VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFND 203
Query: 1045 LKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRV 1104
+++S D IK+WD R +L +R H +VT L + S G L S ++D T+RV
Sbjct: 204 TSDQIISGGIDNDIKVWDL--RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 261
Query: 1105 WSIKP--EEIHCLQVHNVKEAVHELTANAEIACFVSPATGVKV 1145
W ++P + C+++ VH N + C SP G K+
Sbjct: 262 WDVRPFAPKERCVKIFQGN--VHNFEKNL-LRCSWSP-DGSKI 300
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 44/163 (26%), Positives = 78/163 (47%)
Query: 994 LRKLKKYSAVVTDIQKA-----LMNLSSVNAT-ELWHCNEVTELDSSTNG-EVLSLIH-- 1044
+++LK +++ V A L+ S + T +LW + + + N +VL++
Sbjct: 145 VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFND 204
Query: 1045 LKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRV 1104
+++S D IK+WD R +L +R H +VT L + S G L S ++D T+RV
Sbjct: 205 TSDQIISGGIDNDIKVWDL--RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Query: 1105 WSIKP--EEIHCLQVHNVKEAVHELTANAEIACFVSPATGVKV 1145
W ++P + C+++ VH N + C SP G K+
Sbjct: 263 WDVRPFAPKERCVKIFQGN--VHNFEKNL-LRCSWSP-DGSKI 301
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 44/163 (26%), Positives = 78/163 (47%)
Query: 994 LRKLKKYSAVVTDIQKA-----LMNLSSVNAT-ELWHCNEVTELDSSTNG-EVLSLIH-- 1044
+++LK +++ V A L+ S + T +LW + + + N +VL++
Sbjct: 145 VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFND 204
Query: 1045 LKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRV 1104
+++S D IK+WD R +L +R H +VT L + S G L S ++D T+RV
Sbjct: 205 TSDQIISGGIDNDIKVWDL--RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Query: 1105 WSIKP--EEIHCLQVHNVKEAVHELTANAEIACFVSPATGVKV 1145
W ++P + C+++ VH N + C SP G K+
Sbjct: 263 WDVRPFAPKERCVRIFQGN--VHNFEKNL-LRCSWSP-DGSKI 301
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 44/163 (26%), Positives = 78/163 (47%)
Query: 994 LRKLKKYSAVVTDIQKA-----LMNLSSVNAT-ELWHCNEVTELDSSTNG-EVLSLIH-- 1044
+++LK +++ V A L+ S + T +LW + + + N +VL++
Sbjct: 145 VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFND 204
Query: 1045 LKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRV 1104
+++S D IK+WD R +L +R H +VT L + S G L S ++D T+RV
Sbjct: 205 TSDQIISGGIDNDIKVWDL--RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Query: 1105 WSIKP--EEIHCLQVHNVKEAVHELTANAEIACFVSPATGVKV 1145
W ++P + C+++ VH N + C SP G K+
Sbjct: 263 WDVRPFAPKERCVKIFQGN--VHNFEKNL-LRCSWSP-DGSKI 301
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 44/163 (26%), Positives = 78/163 (47%)
Query: 994 LRKLKKYSAVVTDIQKA-----LMNLSSVNAT-ELWHCNEVTELDSSTNG-EVLSLIH-- 1044
+++LK +++ V A L+ S + T +LW + + + N +VL++
Sbjct: 145 VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFND 204
Query: 1045 LKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRV 1104
+++S D IK+WD R +L +R H +VT L + S G L S ++D T+RV
Sbjct: 205 TSDQIISGGIDNDIKVWDL--RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Query: 1105 WSIKP--EEIHCLQVHNVKEAVHELTANAEIACFVSPATGVKV 1145
W ++P + C+++ VH N + C SP G K+
Sbjct: 263 WDVRPFAPKERCVKIFQGN--VHNFEKNL-LRCSWSP-DGSKI 301
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 129 (50.5 bits), Expect = 0.00023, P = 0.00023
Identities = 60/234 (25%), Positives = 101/234 (43%)
Query: 1046 KGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVW 1105
K +S D T+++WD R + + H +V CL V GD + SGS D T RVW
Sbjct: 343 KNTAISGSRDTTLRIWDLRTGTCRSV--LVGHQASVRCLAV--HGDIVVSGSYDTTARVW 398
Query: 1106 SIKPEE-IHCLQVHNVKEAVHELTANAEIACFVSPATGVKVYNWSGAIKHINFNKH---V 1161
SI + L H + ++ + + S T V++++ + H H V
Sbjct: 399 SISEGRFLRALSGHFSQ--IYAIAFDGRRIATGSLDTSVRIWDPNTGQCHAILQGHTSLV 456
Query: 1162 KSLVMTGDKLYCGCSGYSIQEVDLGNLTSTTFYAGTKKLLGKQ-TIHSLHMHNGLLFAGG 1220
L M+GD L G S S++ + S T A +L ++ SL N + +GG
Sbjct: 457 GQLQMSGDTLVTGGSDGSVR------VWSLTRMAPIHRLAAHDNSVTSLQFDNNRIVSGG 510
Query: 1221 SSVDGTAGKVFSISSKTAVGSFTTGID-IQHLAVNSD-FIFTATKCG--TIEVW 1270
S DG KV+ + + + +T D + + + + +++ G +EVW
Sbjct: 511 S--DGRV-KVWCLRTGQLLRELSTPSDTVWRVTFEEEKAVIMSSRSGRTVMEVW 561
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 44/163 (26%), Positives = 78/163 (47%)
Query: 994 LRKLKKYSAVVTDIQKA-----LMNLSSVNAT-ELWHCNEVTELDSSTNG-EVLSLIH-- 1044
+++LK +++ V A L+ S + T +LW + + + N +VL++
Sbjct: 144 VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFND 203
Query: 1045 LKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRV 1104
+++S D IK+WD R +L +R H +VT L + S G L S ++D T+RV
Sbjct: 204 TSDQIISGGIDNDIKVWDL--RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 261
Query: 1105 WSIKP--EEIHCLQVHNVKEAVHELTANAEIACFVSPATGVKV 1145
W ++P + C+++ VH N + C SP G K+
Sbjct: 262 WDVRPFAPKERCVKIFQGN--VHNFEKNL-LRCSWSP-DGSKI 300
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 44/163 (26%), Positives = 78/163 (47%)
Query: 994 LRKLKKYSAVVTDIQKA-----LMNLSSVNAT-ELWHCNEVTELDSSTNG-EVLSLIH-- 1044
+++LK +++ V A L+ S + T +LW + + + N +VL++
Sbjct: 145 VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFND 204
Query: 1045 LKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRV 1104
+++S D IK+WD R +L +R H +VT L + S G L S ++D T+RV
Sbjct: 205 TSDQIISGGIDNDIKVWDL--RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Query: 1105 WSIKP--EEIHCLQVHNVKEAVHELTANAEIACFVSPATGVKV 1145
W ++P + C+++ VH N + C SP G K+
Sbjct: 263 WDVRPFAPKERCVKIFQGN--VHNFEKNL-LRCSWSP-DGSKI 301
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 126 (49.4 bits), Expect = 0.00027, P = 0.00027
Identities = 34/127 (26%), Positives = 62/127 (48%)
Query: 1024 HCNEVTELDSSTNGEVLSLIHLKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTC 1083
H N V ++D G +L+ S +D TIK+WD + ++ + H V+C
Sbjct: 147 HTNAVQDIDFDKTGNLLA---------SCSADLTIKLWDF--QTYDCVKTLHGHDHNVSC 195
Query: 1084 LYVPSSGDKLYSGSLDKTIRVWSIKPEEIHCLQ-VHNVKEAVHELTANAEIACFVSPATG 1142
+ SGD+L S S DKTI+VW +C++ + ++ V ++T + + +C S +
Sbjct: 196 VRFTPSGDQLISSSRDKTIKVWEAATG--YCIKTLVGHEDWVRKITVSEDGSCIASCSND 253
Query: 1143 VKVYNWS 1149
+ W+
Sbjct: 254 QTIKTWN 260
>ZFIN|ZDB-GENE-050208-677 [details] [associations]
symbol:si:dkey-42p8.3 "si:dkey-42p8.3" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR005617
InterPro:IPR009146 InterPro:IPR015943 Pfam:PF00400 Pfam:PF03920
PRINTS:PR01850 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050208-677 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074465 EMBL:CR936480
EMBL:AL953843 IPI:IPI00509224 Ensembl:ENSDART00000105561
Bgee:F1R8R4 Uniprot:F1R8R4
Length = 774
Score = 129 (50.5 bits), Expect = 0.00031, P = 0.00031
Identities = 49/179 (27%), Positives = 80/179 (44%)
Query: 1030 ELDSSTNGEVLSLIHLKGRV-LSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPS 1088
EL SS I +V S SDG I +WD + L +++ + HT +C+ + +
Sbjct: 573 ELTSSAPACYALAISPDNKVCFSCCSDGNIVVWDLHNQTL--VRQFQGHTDGASCIDISN 630
Query: 1089 SGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHEL--TANAEIACFVSPATGVKVY 1146
G KL++G LD T+R W ++ E LQ H+ + L E ++ V+V
Sbjct: 631 DGTKLWTGGLDNTVRCWDLR--EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 688
Query: 1147 NWSGAIKHINFNKHVKSLVMTGDKLYCGCSGYSIQEVDLGNLTSTTFYAGTKKLLGKQT 1205
+ S K+ + H +S V++ YCG S + +L N T + G K+T
Sbjct: 689 HVSKPDKY-QLHLH-ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY--GASIFQSKET 743
>UNIPROTKB|H0YNI7 [details] [associations]
symbol:TLE3 "Transducin-like enhancer protein 3"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR009146 InterPro:IPR015943 Pfam:PF00400 PRINTS:PR01850
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AC026583 EMBL:AC068327 HGNC:HGNC:11839
ProteinModelPortal:H0YNI7 SMR:H0YNI7 Ensembl:ENST00000559191
Bgee:H0YNI7 Uniprot:H0YNI7
Length = 353
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 41/148 (27%), Positives = 68/148 (45%)
Query: 1030 ELDSSTNGEVLSLIHLKGRV-LSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPS 1088
EL SS I +V S SDG I +WD + L +++ + HT +C+ +
Sbjct: 152 ELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTL--VRQFQGHTDGASCIDISH 209
Query: 1089 SGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHEL--TANAEIACFVSPATGVKVY 1146
G KL++G LD T+R W ++ E LQ H+ + L E ++ V+V
Sbjct: 210 DGTKLWTGGLDNTVRSWDLR--EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 267
Query: 1147 NWSGAIKHINFNKHVKSLVMTGDKLYCG 1174
+ + K+ + H +S V++ YCG
Sbjct: 268 HHTKPDKY-QLHLH-ESCVLSLKFAYCG 293
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 124 (48.7 bits), Expect = 0.00038, P = 0.00038
Identities = 43/163 (26%), Positives = 78/163 (47%)
Query: 994 LRKLKKYSAVVTDIQKA-----LMNLSSVNAT-ELWHCNEVTELDSSTNG-EVLSLIH-- 1044
+++LK +++ V A L+ S + T +LW + + + N +VL++
Sbjct: 171 VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFND 230
Query: 1045 LKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRV 1104
+++S D IK+WD R +L +R H +VT L + S G L S ++D T+R+
Sbjct: 231 TSDQIISGGIDNDIKVWDL--RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRI 288
Query: 1105 WSIKP--EEIHCLQVHNVKEAVHELTANAEIACFVSPATGVKV 1145
W ++P + C+++ VH N + C SP G K+
Sbjct: 289 WDVRPFAPKERCVKIFQGN--VHNFEKNL-LRCSWSP-DGSKI 327
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 125 (49.1 bits), Expect = 0.00044, P = 0.00044
Identities = 36/118 (30%), Positives = 54/118 (45%)
Query: 1049 VLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIK 1108
+ SS +D TIK+WD R +LIQ + H V C SG+ L SGS D TI++ +
Sbjct: 201 IASSGADNTIKIWDI--RTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLL 258
Query: 1109 PEEIHCLQVHNVKEAVHELTANAEIACFVSPATGVKVYNWSGAIKHINF----NKHVK 1162
+ +H K V +T + + F S +V W +N+ +KH K
Sbjct: 259 EGRL-IYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTNFDSLNYRELLSKHSK 315
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 141 (54.7 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 323 QSCNSLPCSEKMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCP 382
+S NS +E+ +R+ P + CPI +I DP G TYERKAI+EW+++ P
Sbjct: 693 ESANSRLKTEQANARA--PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSP 750
Query: 383 ITRQPLCSNSLPKTNYVLKRLITSWKEQ 410
+T+ L + L N+ L+ I W+ +
Sbjct: 751 VTKHRLKHSDLTP-NHTLRSAIREWRSR 777
Score = 37 (18.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 283 PDYVKFGPVLPKSA--GFSAVLKSKSNMRGPS 312
P+Y + G + PKS F ++ R P+
Sbjct: 597 PEYQRTGTIRPKSDLYAFGIIILQLLTARHPN 628
>UNIPROTKB|F6XII0 [details] [associations]
symbol:UTP15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364
GeneTree:ENSGT00390000004228 OMA:QFEGHTK Ensembl:ENSCAFT00000013108
EMBL:AAEX03001524 Uniprot:F6XII0
Length = 517
Score = 125 (49.1 bits), Expect = 0.00048, P = 0.00048
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1042 LIHLKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKT 1101
L+ G +L+S +K+WD K +L+ ++ H + VTCLY+ SSG +L SGSLD+
Sbjct: 213 LLFPSGGLLASAGGRYVKIWDMLKGG-QLLVSLKNHHKTVTCLYLSSSGQRLLSGSLDRK 271
Query: 1102 IRVWS 1106
++V+S
Sbjct: 272 VKVYS 276
>UNIPROTKB|E2QVD0 [details] [associations]
symbol:UTP15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364
Ensembl:ENSCAFT00000013108 Uniprot:E2QVD0
Length = 518
Score = 125 (49.1 bits), Expect = 0.00048, P = 0.00048
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1042 LIHLKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKT 1101
L+ G +L+S +K+WD K +L+ ++ H + VTCLY+ SSG +L SGSLD+
Sbjct: 213 LLFPSGGLLASAGGRYVKIWDMLKGG-QLLVSLKNHHKTVTCLYLSSSGQRLLSGSLDRK 271
Query: 1102 IRVWS 1106
++V+S
Sbjct: 272 VKVYS 276
>TAIR|locus:2085929 [details] [associations]
symbol:AT3G18950 "AT3G18950" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AP000735
HOGENOM:HOG000236376 ProtClustDB:CLSN2681936 EMBL:BT005434
EMBL:AK117650 IPI:IPI00535619 RefSeq:NP_188525.1 UniGene:At.38474
ProteinModelPortal:Q9LJ71 SMR:Q9LJ71 STRING:Q9LJ71
EnsemblPlants:AT3G18950.1 GeneID:821427 KEGG:ath:AT3G18950
TAIR:At3g18950 InParanoid:Q9LJ71 OMA:LAINQES PhylomeDB:Q9LJ71
Genevestigator:Q9LJ71 Uniprot:Q9LJ71
Length = 473
Score = 110 (43.8 bits), Expect = 0.00063, Sum P(2) = 0.00062
Identities = 45/176 (25%), Positives = 78/176 (44%)
Query: 1071 IQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEE-IHCLQVHNVKEAVHELTA 1129
+ ++R H AV+CL + LYSGS DKT++VW + + + +Q H+ +A++ + A
Sbjct: 243 VLKIR-HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHD--DAINTVAA 299
Query: 1130 NAEIACFVSPATG-VKVYNWSGAIKHINFNKHVKSLVMTGDKLYCGCS-GYSIQEVDLGN 1187
+ F A G +KV W ++ + +++M + + + V G+
Sbjct: 300 GFDDLLFTGSADGTLKV--WKRELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGS 357
Query: 1188 LTSTT-FYAGTKKLLGKQTIHSLHMHNGLLFAGGSSV-DGTAGKVFSISSKTAVGS 1241
T F+ G K L T+ + L A GS V G A K + + GS
Sbjct: 358 SDGTVNFWEGQKYLSHGGTLRGHRLAVLCLAAAGSLVLSGGADKNICVWRRNGDGS 413
Score = 62 (26.9 bits), Expect = 0.00063, Sum P(2) = 0.00062
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 1034 STNGEVLSLIHLKG--RVLSSHSDGTIKMWDSGKR 1066
ST+G V +++ + G R+ + H DG I++W KR
Sbjct: 174 STSGLVKAIV-ITGDNRIFTGHQDGKIRVWRGSKR 207
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 136 (52.9 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 31/79 (39%), Positives = 42/79 (53%)
Query: 332 EKMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSN 391
+K S R P + CPI +I +P G TYERKAI WL++ N + P+TRQ L
Sbjct: 717 KKEGSNLRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHNIS-PVTRQKLDHF 775
Query: 392 SLPKTNYVLKRLITSWKEQ 410
L N+ L+ I WK +
Sbjct: 776 KLTP-NHTLRSAIRDWKSR 793
Score = 41 (19.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 283 PDYVKFGPVLPKSA--GFSAVLKSKSNMRGPS 312
P+Y + G + PKS F ++ R PS
Sbjct: 614 PEYHRTGTIRPKSDLYAFGIIILQLLTARNPS 645
>UNIPROTKB|F1PH16 [details] [associations]
symbol:TLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000811 "negative regulation of anoikis"
evidence=IEA] [GO:0043124 "negative regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001106 "RNA polymerase II transcription corepressor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR005617 InterPro:IPR009146 InterPro:IPR015943
Pfam:PF00400 Pfam:PF03920 PRINTS:PR01850 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003682 GO:GO:0005667
GO:GO:0043124 GO:GO:0001106 GeneTree:ENSGT00550000074465
OMA:AMDPLVN EMBL:AAEX03000522 Ensembl:ENSCAFT00000002282
Uniprot:F1PH16
Length = 714
Score = 125 (49.1 bits), Expect = 0.00075, P = 0.00075
Identities = 41/148 (27%), Positives = 69/148 (46%)
Query: 1030 ELDSSTNGEVLSLIHLKGRV-LSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPS 1088
EL SS I +V S SDG I +WD + L +++ + HT +C+ + +
Sbjct: 513 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL--VRQFQGHTDGASCIDISN 570
Query: 1089 SGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHEL--TANAEIACFVSPATGVKVY 1146
G KL++G LD T+R W ++ E LQ H+ + L E ++ V+V
Sbjct: 571 DGTKLWTGGLDNTVRSWDLR--EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 628
Query: 1147 NWSGAIKHINFNKHVKSLVMTGDKLYCG 1174
+ + K+ + H +S V++ YCG
Sbjct: 629 HVNKPDKY-QLHLH-ESCVLSLKFAYCG 654
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 122 (48.0 bits), Expect = 0.00078, P = 0.00078
Identities = 69/280 (24%), Positives = 123/280 (43%)
Query: 1003 VVTDIQKALMNLSSV----NATELWHCNEVTELDSSTNGEVLSLIHLKGRVLSSHS-DGT 1057
++TDI + L S + W E+ L+ ++ GR+L+S S D T
Sbjct: 6 IITDIVDCINTLQSTLQRPKVEDNWG-PELQTLEGHSDWIETVTFSPDGRLLASGSNDTT 64
Query: 1058 IKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEEI-HCLQ 1116
IK+WD L+ Q + H+ +V + +G L SGS D TI++W+ + + H ++
Sbjct: 65 IKLWDPASGGLK--QTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTME 122
Query: 1117 VHNVKEAVHELTANAEIACFVSPATGVKVYNWSGAIKHINFNKHVKSLVMTGDKLYCGCS 1176
H+ + + N ++ +PA G + G H ++ V S+ + D S
Sbjct: 123 GHSDRVESVAFSPNGQLW---NPAIGSLKHTIEG---HSDW---VLSVAFSPDGQLLA-S 172
Query: 1177 GYSIQEVDLGNLTSTTFYAGTKKLLGKQTIHSLHM---HNGLLFAGGSSVDGTAGKVF-- 1231
G + + + L + S T G K LG + L + +G L A GS+ D T K++
Sbjct: 173 GSAEKTIKLWD--SAT--CGLKHTLGGHSNWVLPLVFSPDGRLLASGSN-DATI-KLWDP 226
Query: 1232 -SISSKTAVGSFTTGIDIQHLAVNSDFIFTATKCGTIEVW 1270
S S K + + I+ + N + + + TI++W
Sbjct: 227 PSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLW 266
>UNIPROTKB|Q04724 [details] [associations]
symbol:TLE1 "Transducin-like enhancer protein 1"
species:9606 "Homo sapiens" [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IDA;IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=NAS] [GO:0043124 "negative regulation
of I-kappaB kinase/NF-kappaB cascade" evidence=IDA] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:2000811
"negative regulation of anoikis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA;IMP] [GO:0005829 "cytosol" evidence=IMP]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007275
"multicellular organismal development" evidence=TAS] [GO:0009887
"organ morphogenesis" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0001106 "RNA polymerase II transcription corepressor activity"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR005617 InterPro:IPR009146 InterPro:IPR015943
Pfam:PF00400 Pfam:PF03920 PRINTS:PR01850 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0005654 Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0016055 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0007219 GO:GO:0003682 GO:GO:0005667 GO:GO:0009887
GO:GO:0043124 GO:GO:0010628 GO:GO:0008134 EMBL:CH471089
GO:GO:0001106 GO:GO:0030178 GO:GO:2000811 EMBL:M99435 EMBL:AK290860
EMBL:AL365190 EMBL:AL353682 EMBL:BC010100 EMBL:BC015747
IPI:IPI00413270 PIR:B56695 RefSeq:NP_005068.2 UniGene:Hs.197320
UniGene:Hs.689805 PDB:1GXR PDB:2CE8 PDB:2CE9 PDBsum:1GXR
PDBsum:2CE8 PDBsum:2CE9 ProteinModelPortal:Q04724 SMR:Q04724
DIP:DIP-36665N IntAct:Q04724 MINT:MINT-190700 STRING:Q04724
PhosphoSite:Q04724 DMDM:29840816 PaxDb:Q04724 PRIDE:Q04724
DNASU:7088 Ensembl:ENST00000376499 GeneID:7088 KEGG:hsa:7088
UCSC:uc004aly.3 CTD:7088 GeneCards:GC09M084198 HGNC:HGNC:11837
HPA:CAB011482 MIM:600189 neXtProt:NX_Q04724 PharmGKB:PA36539
HOGENOM:HOG000293211 HOVERGEN:HBG004689 OMA:AMDPLVN
OrthoDB:EOG4MGS6V PhylomeDB:Q04724 EvolutionaryTrace:Q04724
GenomeRNAi:7088 NextBio:27723 ArrayExpress:Q04724 Bgee:Q04724
CleanEx:HS_TLE1 Genevestigator:Q04724 GermOnline:ENSG00000196781
Uniprot:Q04724
Length = 770
Score = 125 (49.1 bits), Expect = 0.00083, P = 0.00083
Identities = 41/148 (27%), Positives = 69/148 (46%)
Query: 1030 ELDSSTNGEVLSLIHLKGRV-LSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPS 1088
EL SS I +V S SDG I +WD + L +++ + HT +C+ + +
Sbjct: 569 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL--VRQFQGHTDGASCIDISN 626
Query: 1089 SGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHEL--TANAEIACFVSPATGVKVY 1146
G KL++G LD T+R W ++ E LQ H+ + L E ++ V+V
Sbjct: 627 DGTKLWTGGLDNTVRSWDLR--EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 684
Query: 1147 NWSGAIKHINFNKHVKSLVMTGDKLYCG 1174
+ + K+ + H +S V++ YCG
Sbjct: 685 HVNKPDKY-QLHLH-ESCVLSLKFAYCG 710
>UNIPROTKB|F1SIJ5 [details] [associations]
symbol:TLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR005617
InterPro:IPR009146 InterPro:IPR015943 Pfam:PF00400 Pfam:PF03920
PRINTS:PR01850 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003682 GO:GO:0005667 GO:GO:0043124
GO:GO:0001106 GeneTree:ENSGT00550000074465 CTD:7088 OMA:AMDPLVN
EMBL:CU234204 EMBL:CU407247 RefSeq:XP_003480588.1
Ensembl:ENSSSCT00000005828 GeneID:100524475 KEGG:ssc:100524475
Uniprot:F1SIJ5
Length = 770
Score = 125 (49.1 bits), Expect = 0.00083, P = 0.00083
Identities = 41/148 (27%), Positives = 69/148 (46%)
Query: 1030 ELDSSTNGEVLSLIHLKGRV-LSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPS 1088
EL SS I +V S SDG I +WD + L +++ + HT +C+ + +
Sbjct: 569 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL--VRQFQGHTDGASCIDISN 626
Query: 1089 SGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHEL--TANAEIACFVSPATGVKVY 1146
G KL++G LD T+R W ++ E LQ H+ + L E ++ V+V
Sbjct: 627 DGTKLWTGGLDNTVRSWDLR--EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 684
Query: 1147 NWSGAIKHINFNKHVKSLVMTGDKLYCG 1174
+ + K+ + H +S V++ YCG
Sbjct: 685 HVNKPDKY-QLHLH-ESCVLSLKFAYCG 710
>MGI|MGI:104636 [details] [associations]
symbol:Tle1 "transducin-like enhancer of split 1, homolog of
Drosophila E(spl)" species:10090 "Mus musculus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0008134 "transcription
factor binding" evidence=ISO] [GO:0010628 "positive regulation of
gene expression" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0043124 "negative regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:2000811 "negative regulation of anoikis" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR005617
InterPro:IPR009146 InterPro:IPR015943 Pfam:PF00400 Pfam:PF03920
PRINTS:PR01850 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:104636 GO:GO:0005737 GO:GO:0003714 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0043124
GeneTree:ENSGT00550000074465 CTD:7088 HOGENOM:HOG000293211
HOVERGEN:HBG004689 OrthoDB:EOG4MGS6V EMBL:U61362 EMBL:AY155195
EMBL:AY155196 EMBL:AY155197 EMBL:AY155198 EMBL:AY155199
EMBL:AY155200 EMBL:AK046402 EMBL:AK052961 EMBL:AK076750
EMBL:AK082499 EMBL:AL773513 IPI:IPI00230248 IPI:IPI00230249
IPI:IPI00230250 IPI:IPI00230252 IPI:IPI00230253 IPI:IPI00230254
IPI:IPI00321347 IPI:IPI00623322 RefSeq:NP_035729.3
UniGene:Mm.278444 UniGene:Mm.388819 UniGene:Mm.399716
ProteinModelPortal:Q62440 SMR:Q62440 IntAct:Q62440 MINT:MINT-225467
STRING:Q62440 PhosphoSite:Q62440 PaxDb:Q62440 PRIDE:Q62440
Ensembl:ENSMUST00000107337 GeneID:21885 KEGG:mmu:21885
UCSC:uc008gwk.1 UCSC:uc008tij.2 UCSC:uc008tik.2 NextBio:301400
Bgee:Q62440 Genevestigator:Q62440 GermOnline:ENSMUSG00000008305
Uniprot:Q62440
Length = 770
Score = 125 (49.1 bits), Expect = 0.00083, P = 0.00083
Identities = 41/148 (27%), Positives = 69/148 (46%)
Query: 1030 ELDSSTNGEVLSLIHLKGRV-LSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPS 1088
EL SS I +V S SDG I +WD + L +++ + HT +C+ + +
Sbjct: 569 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL--VRQFQGHTDGASCIDISN 626
Query: 1089 SGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHEL--TANAEIACFVSPATGVKVY 1146
G KL++G LD T+R W ++ E LQ H+ + L E ++ V+V
Sbjct: 627 DGTKLWTGGLDNTVRSWDLR--EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 684
Query: 1147 NWSGAIKHINFNKHVKSLVMTGDKLYCG 1174
+ + K+ + H +S V++ YCG
Sbjct: 685 HVNKPDKY-QLHLH-ESCVLSLKFAYCG 710
>UNIPROTKB|F1MH28 [details] [associations]
symbol:TLE1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000811 "negative regulation of anoikis" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0010628 "positive regulation of gene
expression" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR005617
InterPro:IPR009146 InterPro:IPR015943 Pfam:PF00400 Pfam:PF03920
PRINTS:PR01850 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003682 GO:GO:0005667 GO:GO:0043124
GO:GO:0001106 GeneTree:ENSGT00550000074465 OMA:AMDPLVN
EMBL:DAAA02023089 EMBL:DAAA02023090 IPI:IPI00701785
Ensembl:ENSBTAT00000000322 Uniprot:F1MH28
Length = 771
Score = 125 (49.1 bits), Expect = 0.00083, P = 0.00083
Identities = 41/148 (27%), Positives = 69/148 (46%)
Query: 1030 ELDSSTNGEVLSLIHLKGRV-LSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPS 1088
EL SS I +V S SDG I +WD + L +++ + HT +C+ + +
Sbjct: 570 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL--VRQFQGHTDGASCIDISN 627
Query: 1089 SGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHEL--TANAEIACFVSPATGVKVY 1146
G KL++G LD T+R W ++ E LQ H+ + L E ++ V+V
Sbjct: 628 DGTKLWTGGLDNTVRSWDLR--EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 685
Query: 1147 NWSGAIKHINFNKHVKSLVMTGDKLYCG 1174
+ + K+ + H +S V++ YCG
Sbjct: 686 HVNKPDKY-QLHLH-ESCVLSLKFAYCG 711
>UNIPROTKB|F1NDB6 [details] [associations]
symbol:Gga.54931 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR005617
InterPro:IPR009146 InterPro:IPR015943 Pfam:PF00400 Pfam:PF03920
PRINTS:PR01850 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074465
EMBL:AADN02038861 EMBL:AADN02038862 EMBL:AADN02038863
EMBL:AADN02038864 EMBL:AADN02038865 EMBL:AADN02038866
EMBL:AADN02038867 IPI:IPI00584987 Ensembl:ENSGALT00000013179
ArrayExpress:F1NDB6 Uniprot:F1NDB6
Length = 644
Score = 124 (48.7 bits), Expect = 0.00084, P = 0.00084
Identities = 41/148 (27%), Positives = 68/148 (45%)
Query: 1030 ELDSSTNGEVLSLIHLKGRV-LSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPS 1088
EL SS I +V S SDG I +WD + L +++ + HT +C+ +
Sbjct: 443 ELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTL--VRQFQGHTDGASCIDISH 500
Query: 1089 SGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHEL--TANAEIACFVSPATGVKVY 1146
G KL++G LD T+R W ++ E LQ H+ + L E ++ V+V
Sbjct: 501 DGTKLWTGGLDNTVRSWDLR--EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 558
Query: 1147 NWSGAIKHINFNKHVKSLVMTGDKLYCG 1174
+ + K+ + H +S V++ YCG
Sbjct: 559 HHTKPDKY-QLHLH-ESCVLSLKFAYCG 584
>RGD|1309237 [details] [associations]
symbol:Tle1 "transducin-like enhancer of split 1 (E(sp1)
homolog, Drosophila)" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA;ISO] [GO:0003682
"chromatin binding" evidence=IEA;ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0008134 "transcription
factor binding" evidence=IEA;ISO] [GO:0010628 "positive regulation
of gene expression" evidence=IEA;ISO] [GO:0043124 "negative
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:2000811 "negative regulation of anoikis"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR005617 InterPro:IPR009146 InterPro:IPR015943
Pfam:PF00400 Pfam:PF03920 PRINTS:PR01850 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309237 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003682
GO:GO:0005667 GO:GO:0043124 GO:GO:0001106 IPI:IPI00476306
Ensembl:ENSRNOT00000018421 UCSC:RGD:1309237 ArrayExpress:F1MAI2
Uniprot:F1MAI2
Length = 780
Score = 125 (49.1 bits), Expect = 0.00085, P = 0.00085
Identities = 41/148 (27%), Positives = 69/148 (46%)
Query: 1030 ELDSSTNGEVLSLIHLKGRV-LSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPS 1088
EL SS I +V S SDG I +WD + L +++ + HT +C+ + +
Sbjct: 579 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL--VRQFQGHTDGASCIDISN 636
Query: 1089 SGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHEL--TANAEIACFVSPATGVKVY 1146
G KL++G LD T+R W ++ E LQ H+ + L E ++ V+V
Sbjct: 637 DGTKLWTGGLDNTVRSWDLR--EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 694
Query: 1147 NWSGAIKHINFNKHVKSLVMTGDKLYCG 1174
+ + K+ + H +S V++ YCG
Sbjct: 695 HVNKPDKY-QLHLH-ESCVLSLKFAYCG 720
>UNIPROTKB|F1NFV1 [details] [associations]
symbol:Gga.54931 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR005617
InterPro:IPR009146 InterPro:IPR015943 Pfam:PF00400 Pfam:PF03920
PRINTS:PR01850 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074465
EMBL:AADN02038861 EMBL:AADN02038862 EMBL:AADN02038863
EMBL:AADN02038864 EMBL:AADN02038865 EMBL:AADN02038866
EMBL:AADN02038867 IPI:IPI00597464 Ensembl:ENSGALT00000028342
ArrayExpress:F1NFV1 Uniprot:F1NFV1
Length = 672
Score = 124 (48.7 bits), Expect = 0.00089, P = 0.00089
Identities = 41/148 (27%), Positives = 68/148 (45%)
Query: 1030 ELDSSTNGEVLSLIHLKGRV-LSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPS 1088
EL SS I +V S SDG I +WD + L +++ + HT +C+ +
Sbjct: 471 ELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTL--VRQFQGHTDGASCIDISH 528
Query: 1089 SGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHEL--TANAEIACFVSPATGVKVY 1146
G KL++G LD T+R W ++ E LQ H+ + L E ++ V+V
Sbjct: 529 DGTKLWTGGLDNTVRSWDLR--EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 586
Query: 1147 NWSGAIKHINFNKHVKSLVMTGDKLYCG 1174
+ + K+ + H +S V++ YCG
Sbjct: 587 HHTKPDKY-QLHLH-ESCVLSLKFAYCG 612
>DICTYBASE|DDB_G0282573 [details] [associations]
symbol:DDB_G0282573 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282573 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000047
GenomeReviews:CM000152_GR eggNOG:COG2319 OMA:EDSMAQE
RefSeq:XP_640134.1 ProteinModelPortal:Q54SA5 STRING:Q54SA5
EnsemblProtists:DDB0304577 GeneID:8623671 KEGG:ddi:DDB_G0282573
InParanoid:Q54SA5 ProtClustDB:CLSZ2846758 Uniprot:Q54SA5
Length = 408
Score = 121 (47.7 bits), Expect = 0.00090, P = 0.00090
Identities = 57/219 (26%), Positives = 97/219 (44%)
Query: 1049 VLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIK 1108
+ ++ SD ++K+ D + +E H + CL S +++G + TI+VW ++
Sbjct: 78 IFTASSDCSMKVIDINTGSILYTRE-EAHDYPINCLV--SKEFMVFTGDDEGTIKVWDMR 134
Query: 1109 PEEIHC-LQVHNVKEAVHELTA--NAEIACFVSPATGVKVYNW----SGAIKHINFNKHV 1161
+ I C Q H + + ++T + IA S GV +YN+ I + N+ +
Sbjct: 135 QQNIVCEFQEHG--DFISDITTIDDRHIAA-TSGDGGVSIYNFVRKSMDDISEKSDNELL 191
Query: 1162 KSLVM-TGDKLYCGCSGYSIQEVDLGNLTSTTFYAGTKKLLGKQTIHSLHMHNGLLFAGG 1220
L + G KL CG SI D NL + +AG Q++ +L N F G
Sbjct: 192 SCLSLDNGQKLVCGSQDGSILIYDRNNLENVKKFAGHP-----QSVDALVKVNNNTFFSG 246
Query: 1221 SSVDGTAGKVFSISSKT---AVGSFTTGIDIQHLAVNSD 1256
SS DG + + K VG +T I+ +A++ D
Sbjct: 247 SS-DGII-RFIGLRPKKLLGVVGEHST-FPIERMAISRD 282
>UNIPROTKB|F1SIT5 [details] [associations]
symbol:F1SIT5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR005617
InterPro:IPR009146 InterPro:IPR015943 Pfam:PF00400 Pfam:PF03920
PRINTS:PR01850 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074465
EMBL:CU407175 Ensembl:ENSSSCT00000005484 OMA:RAASEKH Uniprot:F1SIT5
Length = 687
Score = 124 (48.7 bits), Expect = 0.00092, P = 0.00092
Identities = 41/148 (27%), Positives = 68/148 (45%)
Query: 1030 ELDSSTNGEVLSLIHLKGRV-LSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPS 1088
EL SS I +V S SDG I +WD + L +++ + HT +C+ +
Sbjct: 486 ELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTL--VRQFQGHTDGASCIDISH 543
Query: 1089 SGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHEL--TANAEIACFVSPATGVKVY 1146
G KL++G LD T+R W ++ E LQ H+ + L E ++ V+V
Sbjct: 544 DGTKLWTGGLDNTVRSWDLR--EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 601
Query: 1147 NWSGAIKHINFNKHVKSLVMTGDKLYCG 1174
+ + K+ + H +S V++ YCG
Sbjct: 602 HHTKPDKY-QLHLH-ESCVLSLKFAYCG 627
>UNIPROTKB|F5H7D6 [details] [associations]
symbol:TLE3 "Transducin-like enhancer protein 3"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR005617 InterPro:IPR009146 InterPro:IPR015943
Pfam:PF00400 Pfam:PF03920 PRINTS:PR01850 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AC026583 EMBL:AC068327 HGNC:HGNC:11839
IPI:IPI01018263 ProteinModelPortal:F5H7D6 SMR:F5H7D6
Ensembl:ENST00000539550 UCSC:uc002ask.2 ArrayExpress:F5H7D6
Bgee:F5H7D6 Uniprot:F5H7D6
Length = 699
Score = 124 (48.7 bits), Expect = 0.00094, P = 0.00094
Identities = 41/148 (27%), Positives = 68/148 (45%)
Query: 1030 ELDSSTNGEVLSLIHLKGRV-LSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPS 1088
EL SS I +V S SDG I +WD + L +++ + HT +C+ +
Sbjct: 498 ELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTL--VRQFQGHTDGASCIDISH 555
Query: 1089 SGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHEL--TANAEIACFVSPATGVKVY 1146
G KL++G LD T+R W ++ E LQ H+ + L E ++ V+V
Sbjct: 556 DGTKLWTGGLDNTVRSWDLR--EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 613
Query: 1147 NWSGAIKHINFNKHVKSLVMTGDKLYCG 1174
+ + K+ + H +S V++ YCG
Sbjct: 614 HHTKPDKY-QLHLH-ESCVLSLKFAYCG 639
>UNIPROTKB|J9P0C0 [details] [associations]
symbol:TLE3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR005617
InterPro:IPR009146 InterPro:IPR015943 Pfam:PF00400 Pfam:PF03920
PRINTS:PR01850 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074465
EMBL:AAEX03016258 Ensembl:ENSCAFT00000046938 Uniprot:J9P0C0
Length = 707
Score = 124 (48.7 bits), Expect = 0.00095, P = 0.00095
Identities = 41/148 (27%), Positives = 68/148 (45%)
Query: 1030 ELDSSTNGEVLSLIHLKGRV-LSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPS 1088
EL SS I +V S SDG I +WD + L +++ + HT +C+ +
Sbjct: 506 ELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTL--VRQFQGHTDGASCIDISH 563
Query: 1089 SGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHEL--TANAEIACFVSPATGVKVY 1146
G KL++G LD T+R W ++ E LQ H+ + L E ++ V+V
Sbjct: 564 DGTKLWTGGLDNTVRSWDLR--EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 621
Query: 1147 NWSGAIKHINFNKHVKSLVMTGDKLYCG 1174
+ + K+ + H +S V++ YCG
Sbjct: 622 HHTKPDKY-QLHLH-ESCVLSLKFAYCG 647
>UNIPROTKB|H0YNT2 [details] [associations]
symbol:TLE3 "Transducin-like enhancer protein 3"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR005617 InterPro:IPR009146 InterPro:IPR015943
Pfam:PF00400 Pfam:PF03920 PRINTS:PR01850 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AC026583 EMBL:AC068327 HGNC:HGNC:11839
ProteinModelPortal:H0YNT2 SMR:H0YNT2 Ensembl:ENST00000560589
Bgee:H0YNT2 Uniprot:H0YNT2
Length = 716
Score = 124 (48.7 bits), Expect = 0.00097, P = 0.00097
Identities = 41/148 (27%), Positives = 68/148 (45%)
Query: 1030 ELDSSTNGEVLSLIHLKGRV-LSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPS 1088
EL SS I +V S SDG I +WD + L +++ + HT +C+ +
Sbjct: 515 ELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTL--VRQFQGHTDGASCIDISH 572
Query: 1089 SGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHEL--TANAEIACFVSPATGVKVY 1146
G KL++G LD T+R W ++ E LQ H+ + L E ++ V+V
Sbjct: 573 DGTKLWTGGLDNTVRSWDLR--EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 630
Query: 1147 NWSGAIKHINFNKHVKSLVMTGDKLYCG 1174
+ + K+ + H +S V++ YCG
Sbjct: 631 HHTKPDKY-QLHLH-ESCVLSLKFAYCG 656
>UNIPROTKB|F1PKX6 [details] [associations]
symbol:TLE3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR005617
InterPro:IPR009146 InterPro:IPR015943 Pfam:PF00400 Pfam:PF03920
PRINTS:PR01850 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074465
OMA:SQAHLAV EMBL:AAEX03016258 Ensembl:ENSCAFT00000027902
Uniprot:F1PKX6
Length = 722
Score = 124 (48.7 bits), Expect = 0.00098, P = 0.00098
Identities = 41/148 (27%), Positives = 68/148 (45%)
Query: 1030 ELDSSTNGEVLSLIHLKGRV-LSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPS 1088
EL SS I +V S SDG I +WD + L +++ + HT +C+ +
Sbjct: 521 ELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTL--VRQFQGHTDGASCIDISH 578
Query: 1089 SGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHEL--TANAEIACFVSPATGVKVY 1146
G KL++G LD T+R W ++ E LQ H+ + L E ++ V+V
Sbjct: 579 DGTKLWTGGLDNTVRSWDLR--EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 636
Query: 1147 NWSGAIKHINFNKHVKSLVMTGDKLYCG 1174
+ + K+ + H +S V++ YCG
Sbjct: 637 HHTKPDKY-QLHLH-ESCVLSLKFAYCG 662
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1306 1274 0.00081 124 3 11 22 0.39 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 108
No. of states in DFA: 635 (67 KB)
Total size of DFA: 563 KB (2255 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 111.40u 0.24s 111.64t Elapsed: 00:00:07
Total cpu time: 111.42u 0.24s 111.66t Elapsed: 00:00:07
Start: Tue May 21 05:23:33 2013 End: Tue May 21 05:23:40 2013
WARNINGS ISSUED: 1