BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000744
(1306 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 1380 bits (3572), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/991 (69%), Positives = 803/991 (81%), Gaps = 7/991 (0%)
Query: 312 SSPCNESDEGSQSCNSLPCSEKMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQ 371
SS C ESD+G QS NSLP EK++ S+PPKDFVCPITGQIF DPVTLETGQTYERKAIQ
Sbjct: 484 SSLC-ESDDGYQSFNSLPKLEKLSMGSKPPKDFVCPITGQIFCDPVTLETGQTYERKAIQ 542
Query: 372 EWLKRGNTTCPITRQPLCSNSLPKTNYVLKRLITSWKEQYPDLAQEFSYSETPKHSFGSS 431
EWL+ GNTTCPITRQPL ++ LPKTNYVLKRLITSWKEQ P+LAQEFS TP+ S S
Sbjct: 543 EWLRTGNTTCPITRQPLSASILPKTNYVLKRLITSWKEQNPELAQEFSNVNTPRGSSCSP 602
Query: 432 PLKDMTLASSPSRTFNFHIHNNTDDHINERRKRFTQAANATSPTSVISQASVETIINGLK 491
KD+ + S+ RT + H N D + +R RF AA TSPTSV+SQA+VETI+N LK
Sbjct: 603 SAKDIPMLSTRQRTTDSPNHKNKD-YARQRSNRFMPAAITTSPTSVLSQAAVETIVNSLK 661
Query: 492 PYVTCLCTSENLQECETAVLAIARLWKESKGDPGVHAYLLKPTIINGFAEILSASLSREV 551
PY++ LCTSENL ECE AVL IARL K+SK +P +H+YL KPTIING EILSAS +REV
Sbjct: 662 PYISSLCTSENLPECEEAVLKIARLLKDSKTNPQIHSYLSKPTIINGLVEILSASRNREV 721
Query: 552 LRTSVYILSELMVADESVGDILTSVDSDFDCLAALLKNGLGEAAVLIYQLRPAFAQLSAH 611
LRTS+YILSEL+ D+SV + L SVDSDFDCLA LLKNGL EAA+LIYQLRP FAQLSAH
Sbjct: 722 LRTSIYILSELIFTDDSVAETLNSVDSDFDCLATLLKNGLAEAALLIYQLRPVFAQLSAH 781
Query: 612 EFIPSLVQLVLNKTEEFDELQFVMEPKDAAIEMLEQILMGGDKKSRSITALSLISANGIP 671
E IPSLV ++ NK EE D+ Q V++PKDAAI +LEQ LMGGD+ SRS+ A S+ISANGIP
Sbjct: 782 ELIPSLVDVIQNKNEELDDFQLVIDPKDAAIAILEQTLMGGDEYSRSLNASSVISANGIP 841
Query: 672 ALIKCLDRVEVRRSIVSILLCCMHADKSCKTLIAKRIELSHVLDLFHDGNDSVRGICINF 731
L+K L+R+E RRS+VS+LLCCM A+KSCK LIA RIELS VL+LFH GNDSVRG C+ F
Sbjct: 842 TLVKYLERMEGRRSVVSVLLCCMQAEKSCKNLIANRIELSPVLELFHSGNDSVRGTCVEF 901
Query: 732 LSELVLLNRRTFSNQILQVIRDEGSFSTMHTFLVYLQMAPMEQQPATASLLLQLDLLVEP 791
LSELV LNRRT NQIL I+DEG+FSTMHTFLVYLQMAPME Q A ASLLLQLDLL EP
Sbjct: 902 LSELVQLNRRTSCNQILHTIKDEGAFSTMHTFLVYLQMAPMEHQLAVASLLLQLDLLAEP 961
Query: 792 RKMSMYREEAVEALIEALRRKDFPNSQMMALDALLSLTGRFTFSGKSYTEALLLKIAGFD 851
RKMS+YREEAVE LIEAL +KDF N+QM ALDALL L G + SGKSYTEA LLKIAGFD
Sbjct: 962 RKMSIYREEAVETLIEALWQKDFSNTQMKALDALLFLIGHISSSGKSYTEAWLLKIAGFD 1021
Query: 852 QPYNALMKPERLSKPESEMVESMEEEEQAACSWEKRVAFVLCNHEKGSIFKALEECLKSN 911
QPYNALMK E+L + +++++E+ME+E+ A SW+KR+A VLCNHE GSIFKALEECLKSN
Sbjct: 1022 QPYNALMKVEQLGQHDNDLIETMEDEKNALNSWQKRIASVLCNHENGSIFKALEECLKSN 1081
Query: 912 SLEMAKSCLVIAAWLTHMLSTLPDTGVRGTARRSLLDEFINVLQSSRNLEEKILTALALK 971
SL+MAKSCLV+A WLTHML TLPDTGVR AR+SLL+E INVLQSS+NLEEKIL LALK
Sbjct: 1082 SLKMAKSCLVLATWLTHMLYTLPDTGVRDVARKSLLEEVINVLQSSKNLEEKILATLALK 1141
Query: 972 TFISDPVALEELGKYAKCIYGTLRKLKKYSAVVTDIQKALMNLSSVNATELWHCNEVTEL 1031
TFISDP E L YAK IY TLR+LKKYS V DI K ++NL SV+ TELW C EV EL
Sbjct: 1142 TFISDPSTHEALRVYAKSIYRTLRRLKKYSVVAVDIMKVILNLKSVDVTELWSCKEVVEL 1201
Query: 1032 DSSTNGEVLSLIHLKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGD 1091
D S+NGEVLS+++L G+VLS H+DGTIK+WD+ KR+ R+IQE EHT+AVT L SSGD
Sbjct: 1202 DLSSNGEVLSMVYLNGQVLSGHTDGTIKVWDARKRIPRVIQETHEHTKAVTSLC--SSGD 1259
Query: 1092 KLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHELTANAEIACFVSPATGVKVYNWSGA 1151
+LYSGSLDKTIRVW+IK + I C+ V+++KEAVHEL AN ++AC+VS TGVKV+NWS A
Sbjct: 1260 RLYSGSLDKTIRVWTIKSDGIKCIDVYDIKEAVHELAANDKLACYVSQGTGVKVFNWSEA 1319
Query: 1152 IKHINFNKHVKSLVMTGDKLYCGCSGYSIQEVDLGNLTSTTFYAGTKKLLGKQTIHSLHM 1211
K INF+K+VKSL + GDKLYCGCSGYSIQEVDL TS +F+ GT+KLLGKQTIHSL +
Sbjct: 1320 PKLINFSKYVKSLAVAGDKLYCGCSGYSIQEVDLSTYTSNSFFTGTRKLLGKQTIHSLQI 1379
Query: 1212 HNGLLFAGGSSVDGTAGKVFSISSKTAVGSFTTGIDIQHLAVNSDFIFTATKCGTIEVWL 1271
H+ LFA GSSVD TAGK+FS+S K VGS +TG+DI +A+NSDFIF TK GTIEVWL
Sbjct: 1380 HDDYLFACGSSVDATAGKIFSLSQKMVVGSLSTGLDIHRIAINSDFIFAGTKFGTIEVWL 1439
Query: 1272 KERVTRVASVKANNSGGGHAKITCLGTGVDG 1302
K++ TRVAS+K GGH KIT L + VDG
Sbjct: 1440 KDKFTRVASIKM---AGGHTKITSLVSDVDG 1467
Score = 541 bits (1393), Expect = e-152, Method: Compositional matrix adjust.
Identities = 245/305 (80%), Positives = 273/305 (89%)
Query: 1 MAGNYRFAMDQKDIVRLMITSVGSFIQDRLINQEERTQHKEQCAERLAAEDGSNDKDSEF 60
MA N+RF MDQKDIVR + T+V SFIQDRLIN+E+RTQHKEQCAERLAAEDGS DKD+E
Sbjct: 1 MARNFRFMMDQKDIVRFLTTTVDSFIQDRLINKEQRTQHKEQCAERLAAEDGSGDKDTEV 60
Query: 61 RYSDQAVLANLDWGIEALEEAINTSNMETKLARLDYAEKMLQVCAMLDSDQQTAGVPNFY 120
YSDQAVLANLDWGIEALEEAINT NMETKLARLDYAEKMLQVCAML+ Q+ AGVPN Y
Sbjct: 61 EYSDQAVLANLDWGIEALEEAINTYNMETKLARLDYAEKMLQVCAMLNPKQKIAGVPNSY 120
Query: 121 LSAWAHLNLSYLWKLRNNVQNSVLHALEMFSIDPFFSRIDFAPELWKELFLPQMSSIVGW 180
LSAWAHLNLSYLWKLRNNVQN + HALEMF +DPFF+RIDFAPELWK LFLP MSSIVGW
Sbjct: 121 LSAWAHLNLSYLWKLRNNVQNCISHALEMFIVDPFFTRIDFAPELWKSLFLPHMSSIVGW 180
Query: 181 YSEARHRLVMEAIPDSSDLSFTADLDQFFNESLIFSMRPEQVEKLQQLEQLYGDSLDENT 240
YSE RHRL+ME IPDS+DLSFTAD +QFFNESL+ +MRP Q+EKLQ+LEQLYG+SLDENT
Sbjct: 181 YSEERHRLMMEVIPDSADLSFTADFEQFFNESLVLTMRPHQLEKLQKLEQLYGESLDENT 240
Query: 241 RMFAKYYKDCMNSDSSTRTKVIPMLPIAEPPATPLHEFSRSIPDYVKFGPVLPKSAGFSA 300
+++AKYY DCMNSDSS+ K +PMLPIAEPP TPLHE SR+IPD+VKFGP+LPKSAGFS
Sbjct: 241 KLYAKYYNDCMNSDSSSSKKAVPMLPIAEPPMTPLHELSRTIPDFVKFGPILPKSAGFSL 300
Query: 301 VLKSK 305
+SK
Sbjct: 301 APRSK 305
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 1375 bits (3559), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/991 (68%), Positives = 804/991 (81%), Gaps = 6/991 (0%)
Query: 312 SSPCNESDEGSQSCNSLPCSEKMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQ 371
SS C ES++G QS +S P EK+T S+PPKDFVCPITGQIF+DPVTLETGQTYERKAIQ
Sbjct: 486 SSHC-ESEDGYQSSSSFPKLEKLTIGSKPPKDFVCPITGQIFSDPVTLETGQTYERKAIQ 544
Query: 372 EWLKRGNTTCPITRQPLCSNSLPKTNYVLKRLITSWKEQYPDLAQEFSYSETPKHSFGSS 431
EWL GNTTCPITRQ L +N LPKTNYVLKRLI SWKEQ P+LAQEFS S TP+ S S
Sbjct: 545 EWLGTGNTTCPITRQALSANILPKTNYVLKRLIVSWKEQNPELAQEFSNSNTPRGSSCSP 604
Query: 432 PLKDMTLASSPSRTFNFHIHNNTDDHINERRKRFTQAANATSPTSVISQASVETIINGLK 491
KD+T+ SS RT + DD+I +R RFT+ + SPTSV+SQA+VETIIN L
Sbjct: 605 SAKDITMVSSIQRTTDSPSQKYKDDYIRQRNNRFTRVSVGASPTSVLSQAAVETIINSLT 664
Query: 492 PYVTCLCTSENLQECETAVLAIARLWKESKGDPGVHAYLLKPTIINGFAEILSASLSREV 551
PY+T LCTSENLQ+CE AVL IARLWK+SK DP +H+YL KPT+++G EILSASL+REV
Sbjct: 665 PYITSLCTSENLQDCEQAVLEIARLWKDSKTDPQIHSYLSKPTVVSGLVEILSASLNREV 724
Query: 552 LRTSVYILSELMVADESVGDILTSVDSDFDCLAALLKNGLGEAAVLIYQLRPAFAQLSAH 611
LR S+YILSEL+ +DE VG+ L SVDSDFDCLA LLKNGL EAA+LIYQLRP FAQLS H
Sbjct: 725 LRRSIYILSELIFSDERVGETLNSVDSDFDCLAMLLKNGLAEAALLIYQLRPVFAQLSEH 784
Query: 612 EFIPSLVQLVLNKTEEFDELQFVMEPKDAAIEMLEQILMGGDKKSRSITALSLISANGIP 671
E IPSL+Q++ NK+E+ D+ Q ++PK AAI +LEQIL+GGD+ +RS+ A S+ISANGIP
Sbjct: 785 ELIPSLIQVIQNKSEDIDDFQLAIDPKAAAIAILEQILIGGDEYNRSVNASSVISANGIP 844
Query: 672 ALIKCLDRVEVRRSIVSILLCCMHADKSCKTLIAKRIELSHVLDLFHDGNDSVRGICINF 731
A++K LD+ E RR ++SILLCCM A+KSCK+ IA RIELS VL+LFH GNDSVRGIC+ F
Sbjct: 845 AIVKYLDKTEGRRPVISILLCCMQAEKSCKSSIANRIELSPVLELFHAGNDSVRGICVEF 904
Query: 732 LSELVLLNRRTFSNQILQVIRDEGSFSTMHTFLVYLQMAPMEQQPATASLLLQLDLLVEP 791
LSELV LNRRT SNQ LQ+I+DEG+FSTMHTFLVYLQMAPME Q A ASLLLQLDLL EP
Sbjct: 905 LSELVRLNRRTSSNQTLQIIKDEGAFSTMHTFLVYLQMAPMEHQIAVASLLLQLDLLAEP 964
Query: 792 RKMSMYREEAVEALIEALRRKDFPNSQMMALDALLSLTGRFTFSGKSYTEALLLKIAGFD 851
RKMS+YREEAVE LIEAL +KDF N+QM ALDALL L G T SGKSYTEA LLKIAGFD
Sbjct: 965 RKMSIYREEAVETLIEALWQKDFSNNQMKALDALLFLIGHVTSSGKSYTEAGLLKIAGFD 1024
Query: 852 QPYNALMKPERLSKPESEMVESMEEEEQAACSWEKRVAFVLCNHEKGSIFKALEECLKSN 911
QPYN LMK E+L +++ +E+ME+E+ A SW+KRVA VLCNHE GSIF+ALEECLKSN
Sbjct: 1025 QPYNVLMKAEQLGHSDNDFMETMEDEKNAMKSWQKRVASVLCNHENGSIFQALEECLKSN 1084
Query: 912 SLEMAKSCLVIAAWLTHMLSTLPDTGVRGTARRSLLDEFINVLQSSRNLEEKILTALALK 971
SL+MAKSCLV+A WLTHML TLPDTGVR AR+SLL+ +NVLQSS+NLEEKIL +LALK
Sbjct: 1085 SLKMAKSCLVLATWLTHMLFTLPDTGVRDVARKSLLEALMNVLQSSKNLEEKILASLALK 1144
Query: 972 TFISDPVALEELGKYAKCIYGTLRKLKKYSAVVTDIQKALMNLSSVNATELWHCNEVTEL 1031
+FISDP E L YAK IY LRKLKKYS V DI KAL+NL+SV+ TELW C EV EL
Sbjct: 1145 SFISDPTVHEVLRVYAKSIYRILRKLKKYSTVAADILKALLNLNSVDVTELWSCKEVVEL 1204
Query: 1032 DSSTNGEVLSLIHLKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGD 1091
D S+NGEVLSL +L G+VLS H+DGTIK+WD+ KR+ R+IQE REH +AVT L SS D
Sbjct: 1205 DLSSNGEVLSLHYLNGQVLSGHADGTIKVWDARKRIPRVIQETREHKKAVTSLC--SSVD 1262
Query: 1092 KLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHELTANAEIACFVSPATGVKVYNWSGA 1151
KLYS SLDKTIRVW+IKP+ I C+ V++VKEAV+EL ANA++AC+V+ TGVKV+NW A
Sbjct: 1263 KLYSSSLDKTIRVWTIKPDGIKCIDVYDVKEAVYELAANAKLACYVTQGTGVKVFNWLDA 1322
Query: 1152 IKHINFNKHVKSLVMTGDKLYCGCSGYSIQEVDLGNLTSTTFYAGTKKLLGKQTIHSLHM 1211
K INFNK+VK L ++GDKLYCGCSGYSIQEVDL TST+F+ GT+KLLGKQTIHSL +
Sbjct: 1323 PKFINFNKYVKCLAVSGDKLYCGCSGYSIQEVDLSKYTSTSFFTGTRKLLGKQTIHSLQI 1382
Query: 1212 HNGLLFAGGSSVDGTAGKVFSISSKTAVGSFTTGIDIQHLAVNSDFIFTATKCGTIEVWL 1271
H+ LLFA GSS+D TAGK+FS+SSK VGS +TG+D+ +A+NSDFIF TK GTIEVWL
Sbjct: 1383 HDDLLFACGSSIDATAGKIFSLSSKMVVGSLSTGLDVHRVAINSDFIFAGTKFGTIEVWL 1442
Query: 1272 KERVTRVASVKANNSGGGHAKITCLGTGVDG 1302
K++ TRVAS+K GG+ KIT L + DG
Sbjct: 1443 KDKFTRVASIKM---AGGNTKITSLASDADG 1470
Score = 528 bits (1359), Expect = e-148, Method: Compositional matrix adjust.
Identities = 232/299 (77%), Positives = 271/299 (90%)
Query: 1 MAGNYRFAMDQKDIVRLMITSVGSFIQDRLINQEERTQHKEQCAERLAAEDGSNDKDSEF 60
M+GN+RF MDQKDIVR + T++ SFIQDRLIN+E+RTQHK+QCAERLAAEDG+ DK++E
Sbjct: 1 MSGNFRFMMDQKDIVRFLTTTIDSFIQDRLINKEQRTQHKDQCAERLAAEDGNTDKETEV 60
Query: 61 RYSDQAVLANLDWGIEALEEAINTSNMETKLARLDYAEKMLQVCAMLDSDQQTAGVPNFY 120
YSDQAVLANLDWGIEALEEAINT NMETKLARLDYAEKMLQVCAML+ Q+TAGVPN Y
Sbjct: 61 EYSDQAVLANLDWGIEALEEAINTYNMETKLARLDYAEKMLQVCAMLNPKQKTAGVPNSY 120
Query: 121 LSAWAHLNLSYLWKLRNNVQNSVLHALEMFSIDPFFSRIDFAPELWKELFLPQMSSIVGW 180
LSAWAHLNLSYLWKLRNN+++ + H+LEMF +DPFFSRIDFAPELWK LFLP MSSIVGW
Sbjct: 121 LSAWAHLNLSYLWKLRNNIKSCIYHSLEMFIVDPFFSRIDFAPELWKNLFLPHMSSIVGW 180
Query: 181 YSEARHRLVMEAIPDSSDLSFTADLDQFFNESLIFSMRPEQVEKLQQLEQLYGDSLDENT 240
YSE RH+L+ME +P+S+D S+TAD D+ FNESL+FSMRP Q+EKLQ+LEQLYG+SLDENT
Sbjct: 181 YSEERHKLMMEVLPESTDFSYTADFDKVFNESLVFSMRPNQLEKLQKLEQLYGESLDENT 240
Query: 241 RMFAKYYKDCMNSDSSTRTKVIPMLPIAEPPATPLHEFSRSIPDYVKFGPVLPKSAGFS 299
R++AKYY DCMN DS++ KV+PMLPIAEPP TPLHE SRS+PD+VKFGP+LPKS+GFS
Sbjct: 241 RLYAKYYNDCMNPDSTSSKKVVPMLPIAEPPMTPLHELSRSVPDFVKFGPILPKSSGFS 299
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus GN=LIN
PE=1 SV=1
Length = 1485
Score = 1335 bits (3454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/991 (68%), Positives = 791/991 (79%), Gaps = 7/991 (0%)
Query: 312 SSPCNESDEGSQSCNSLPCSEKMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQ 371
SS C ES++G QS +SLP EK++ S+PPKDFVCPITGQIF DPVTLETGQTYERKAIQ
Sbjct: 484 SSHC-ESEDGYQSSSSLPKLEKLSMGSKPPKDFVCPITGQIFCDPVTLETGQTYERKAIQ 542
Query: 372 EWLKRGNTTCPITRQPLCSNSLPKTNYVLKRLITSWKEQYPDLAQEFSYSETPKHSFGSS 431
EWL+ GNTTCPITRQPL ++ LPKTNYVLKRLITSWKEQ P+LAQEFS TP+ S S
Sbjct: 543 EWLRTGNTTCPITRQPLSASILPKTNYVLKRLITSWKEQNPELAQEFSNVNTPRGSSCSP 602
Query: 432 PLKDMTLASSPSRTFNFHIHNNTDDHINERRKRFTQAANATSPTSVISQASVETIINGLK 491
KD+ + S+ RT + H N D + +R RF AA TSPTSV+SQA+VETI+N LK
Sbjct: 603 SAKDIPMLSTRQRTTDSPNHKNKD-YARQRSNRFMPAAITTSPTSVLSQAAVETIVNSLK 661
Query: 492 PYVTCLCTSENLQECETAVLAIARLWKESKGDPGVHAYLLKPTIINGFAEILSASLSREV 551
PY++ LCTSENL ECE AVL IARL K+SK +P +H+YL KPTIING EILSAS +REV
Sbjct: 662 PYISSLCTSENLPECEEAVLKIARLLKDSKTNPQIHSYLSKPTIINGLVEILSASRNREV 721
Query: 552 LRTSVYILSELMVADESVGDILTSVDSDFDCLAALLKNGLGEAAVLIYQLRPAFAQLSAH 611
LRTS+YILSEL+ D+SV + L SVDSDFDCLA LLKNGL EAA+LIYQLRP FAQLSAH
Sbjct: 722 LRTSIYILSELIFTDDSVAETLNSVDSDFDCLATLLKNGLAEAALLIYQLRPVFAQLSAH 781
Query: 612 EFIPSLVQLVLNKTEEFDELQFVMEPKDAAIEMLEQILMGGDKKSRSITALSLISANGIP 671
E IPSLV ++ NK EE D+ Q V++PKDAAI +LEQ LMGGD+ SRS+ A S+ISANGIP
Sbjct: 782 ELIPSLVDVIQNKNEELDDFQLVIDPKDAAIAILEQTLMGGDEYSRSLNASSVISANGIP 841
Query: 672 ALIKCLDRVEVRRSIVSILLCCMHADKSCKTLIAKRIELSHVLDLFHDGNDSVRGICINF 731
L+K L+R+E RRS+VS+LLCCM A+KSCK LIA RIELS VL+LFH GNDSVRG C+ F
Sbjct: 842 TLVKYLERMEGRRSVVSVLLCCMQAEKSCKNLIANRIELSPVLELFHSGNDSVRGTCVEF 901
Query: 732 LSELVLLNRRTFSNQILQVIRDEGSFSTMHTFLVYLQMAPMEQQPATASLLLQLDLLVEP 791
LSELV LNRRT NQ+L I+DEG+FSTMHTFLVYLQMAPME Q A ASLLLQLDLL EP
Sbjct: 902 LSELVQLNRRTSCNQLLHTIKDEGAFSTMHTFLVYLQMAPMEHQLAVASLLLQLDLLAEP 961
Query: 792 RKMSMYREEAVEALIEALRRKDFPNSQMMALDALLSLTGRFTFSGKSYTEALLLKIAGFD 851
RKMS+YREEAVE LIEAL +KDF N+QM ALDALL L G + SGKSYTEA LLKIAGFD
Sbjct: 962 RKMSIYREEAVETLIEALWQKDFSNTQMKALDALLFLIGHISSSGKSYTEAWLLKIAGFD 1021
Query: 852 QPYNALMKPERLSKPESEMVESMEEEEQAACSWEKRVAFVLCNHEKGSIFKALEECLKSN 911
QPYNALMK E+L + +++++E+ME+E+ A SW+KR+A VLCNHE GSIFKALEECLKSN
Sbjct: 1022 QPYNALMKVEQLGQHDNDLIETMEDEKNALNSWQKRIASVLCNHENGSIFKALEECLKSN 1081
Query: 912 SLEMAKSCLVIAAWLTHMLSTLPDTGVRGTARRSLLDEFINVLQSSRNLEEKILTALALK 971
SL+MAKSCLV+A WLT ML TLPDTGVR AR+SLL+E I VL SS++LE+ IL L+L
Sbjct: 1082 SLKMAKSCLVLATWLTRMLYTLPDTGVRDVARKSLLEEVIKVLHSSKSLEDMILVTLSLY 1141
Query: 972 TFISDPVALEELGKYAKCIYGTLRKLKKYSAVVTDIQKALMNLSSVNATELWHCNEVTEL 1031
FISDP E L YAK IY LRKLKKYS V DI KAL+NL+SV+ TELW C EV EL
Sbjct: 1142 PFISDPTVHEVLRVYAKSIYRILRKLKKYSTVAADILKALLNLNSVDVTELWSCKEVVEL 1201
Query: 1032 DSSTNGEVLSLIHLKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGD 1091
D S+NGEVLSL +L G+VLS DGT K+ D+ KR+ R+IQE EHT+AVT L SSGD
Sbjct: 1202 DLSSNGEVLSLHYLNGQVLSGLMDGTSKVCDARKRIPRVIQETHEHTKAVTSLC--SSGD 1259
Query: 1092 KLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHELTANAEIACFVSPATGVKVYNWSGA 1151
+LYS SLDKTIRVW+IK + I C+ V+++KEAVHEL AN ++AC+VS TGVKV+NWS A
Sbjct: 1260 RLYSASLDKTIRVWTIKSDGIKCIDVYDIKEAVHELAANDKLACYVSQGTGVKVFNWSEA 1319
Query: 1152 IKHINFNKHVKSLVMTGDKLYCGCSGYSIQEVDLGNLTSTTFYAGTKKLLGKQTIHSLHM 1211
K INF+K+VKSL + GDKLYCGCSGYSIQEVDL TS +F+ GT+KLLGKQTIHSL +
Sbjct: 1320 PKLINFSKYVKSLAVAGDKLYCGCSGYSIQEVDLSTYTSNSFFTGTRKLLGKQTIHSLQI 1379
Query: 1212 HNGLLFAGGSSVDGTAGKVFSISSKTAVGSFTTGIDIQHLAVNSDFIFTATKCGTIEVWL 1271
H+ LFA SSVD TAGK+FS+S K VGS +TG+DI +A+NSDFIF TK GTIEVWL
Sbjct: 1380 HDDYLFACVSSVDATAGKIFSLSQKMVVGSLSTGLDIHRIAINSDFIFAGTKFGTIEVWL 1439
Query: 1272 KERVTRVASVKANNSGGGHAKITCLGTGVDG 1302
K++ TRVAS++ GGH KIT L + VDG
Sbjct: 1440 KDKFTRVASIQM---AGGHTKITSLVSDVDG 1467
Score = 544 bits (1402), Expect = e-153, Method: Compositional matrix adjust.
Identities = 246/305 (80%), Positives = 274/305 (89%)
Query: 1 MAGNYRFAMDQKDIVRLMITSVGSFIQDRLINQEERTQHKEQCAERLAAEDGSNDKDSEF 60
MAGN+RF MDQKDIVR + T+V SFIQDRLIN+E+RTQHKEQCAERLAAEDGS DKD+E
Sbjct: 1 MAGNFRFMMDQKDIVRFLTTTVDSFIQDRLINKEQRTQHKEQCAERLAAEDGSGDKDTEV 60
Query: 61 RYSDQAVLANLDWGIEALEEAINTSNMETKLARLDYAEKMLQVCAMLDSDQQTAGVPNFY 120
YSDQAVLANLDWGIEALEEAINT NMETKLARLDYAEKMLQVCAML+ Q+ AGVPN Y
Sbjct: 61 EYSDQAVLANLDWGIEALEEAINTYNMETKLARLDYAEKMLQVCAMLNPKQKIAGVPNSY 120
Query: 121 LSAWAHLNLSYLWKLRNNVQNSVLHALEMFSIDPFFSRIDFAPELWKELFLPQMSSIVGW 180
LSAWAHLNLSYLWKLRNNVQN + HALEMF +DPFF+RIDFAPELWK LFLP MSSIVGW
Sbjct: 121 LSAWAHLNLSYLWKLRNNVQNCISHALEMFIVDPFFTRIDFAPELWKSLFLPHMSSIVGW 180
Query: 181 YSEARHRLVMEAIPDSSDLSFTADLDQFFNESLIFSMRPEQVEKLQQLEQLYGDSLDENT 240
YSE RHRL+ME IPDS+DLSFTAD +QFFNESL+ +MRP Q+EKLQ+LEQLYG+SLDENT
Sbjct: 181 YSEERHRLMMEVIPDSADLSFTADFEQFFNESLVLTMRPHQLEKLQKLEQLYGESLDENT 240
Query: 241 RMFAKYYKDCMNSDSSTRTKVIPMLPIAEPPATPLHEFSRSIPDYVKFGPVLPKSAGFSA 300
+++AKYY DCMNSDSS+ K +PMLPIAEPP TPLHE SR+IPD+VKFGP+LPKSAGFS
Sbjct: 241 KLYAKYYNDCMNSDSSSSKKAVPMLPIAEPPMTPLHELSRTIPDFVKFGPILPKSAGFSL 300
Query: 301 VLKSK 305
+SK
Sbjct: 301 APRSK 305
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 225/532 (42%), Gaps = 85/532 (15%)
Query: 220 EQVE----KLQQLEQLYGDSLDENTRMFAKYYKDCMNSDSSTRTKVIPMLPIAEPPATPL 275
EQVE +L++ Q YG SL N++ F+ + M D+S+ KVI L +
Sbjct: 136 EQVELARLQLRRAMQRYG-SL--NSKKFSSGLSEPMEKDASSNRKVIEKL-------ESI 185
Query: 276 HEFSRSIPDYVKFGPVLP---KSAGFSAVLKSKSNMRGPSSPCNESDEGSQSCNSLPCSE 332
E S+ D KF P S + L + E+ + SQ ++L
Sbjct: 186 PETVHSLSDEKKFESPPPWKSSSVSLAFFLSKDGDDERLEKAVTENSDDSQKSDNLTI-- 243
Query: 333 KMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNS 392
P+DF+CPI+ ++ DP + TGQTYER IQ W+ GN +CP T+Q L + +
Sbjct: 244 --------PEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFT 295
Query: 393 LPKTNYVLKRLITSWKEQYPDLAQEFSY-SETPKHSFGSSPLKDMTLASSPSRTFNFHIH 451
L NYVL+ LI+ W ++ ++ Q Y + K+S GS +D++ S R +
Sbjct: 296 L-TPNYVLRSLISQWCTKH-NIEQPGGYMNGRTKNSDGS--FRDLSGDMSAIRALVCKLS 351
Query: 452 NNTDDHINERRKRFTQAANATSPTSVISQASVETII----NGLKPYVTCLCTSENLQEC- 506
+ + I +RR A S +S+ S + I G P + L TS+ E
Sbjct: 352 SQS---IEDRR-------TAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQ 401
Query: 507 ETAVLAIARL--WKESKGDPGVHAYLLKPTIINGFAEILSASLSREVLRTSVYILSELMV 564
E AV I L ++ +K ++ + +L A S E + L L +
Sbjct: 402 ENAVTCILNLSIYEHNK------ELIMLAGAVTSIVLVLRAG-SMEARENAAATLFSLSL 454
Query: 565 ADESVGDILTSVDSDFDCLAALLK----NGLGEAA-----VLIYQLRPAFAQLSAHEFIP 615
ADE+ I+ L LL+ G +AA + IYQ A + +
Sbjct: 455 ADEN--KIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAG--IVK 510
Query: 616 SLVQLVLNKTEEFDELQFVMEPKDAAIEMLEQILMGGDKKSRSITALSLISANGIPALIK 675
LV+++ + + E D A+ +L + S + +++ AN IP LI
Sbjct: 511 PLVKMLTDSSSE--------RMADEALTILSVL------ASNQVAKTAILRANAIPPLID 556
Query: 676 CL--DRVEVRRSIVSILLCCMHADKSCKTLIAKRIELSHVLDLFHDGNDSVR 725
CL D+ R + +ILLC D I + + +++L DG + +
Sbjct: 557 CLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAK 608
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 180/403 (44%), Gaps = 51/403 (12%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P DF+CP++ ++ DPV + TGQTYER IQ W+ GN TCP T+Q L + +L NYVL
Sbjct: 242 PVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTP-NYVL 300
Query: 401 KRLITSWKEQYPDLAQEFSYSETPKHSFGSSPLKDMTLASSPSRTFNFHIHNNTDDHINE 460
+ LI+ W ++ ++ Q Y + G DM++ + + + +T+D N
Sbjct: 301 RSLISRWCAEH-NIEQPAGYINGRTKNSG-----DMSVIRALVQRLS---SRSTEDRRNA 351
Query: 461 RRKRFTQAANATSPTSVISQASVETIINGLKPYVTCLCTSENLQECETAVLAIARL--WK 518
+ + + +T +I++A G P + L TSE++ E A+ + L ++
Sbjct: 352 VSEIRSLSKRSTDNRILIAEA-------GAIPVLVNLLTSEDVATQENAITCVLNLSIYE 404
Query: 519 ESKGDPGVHAYLLKPTIINGFAEILSASLSREVLRTSVYILSELMVADESVGDILTSVDS 578
+K ++ + ++L A + E + L L +ADE+ I+
Sbjct: 405 NNK------ELIMFAGAVTSIVQVLRAG-TMEARENAAATLFSLSLADEN--KIIIGGSG 455
Query: 579 DFDCLAALLKNGL----GEAAVLIYQL---RPAFAQLSAHEFIPSLVQLVLNKTEEFDEL 631
L LL+NG +AA ++ L + + +LV+++ + T
Sbjct: 456 AIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRH---- 511
Query: 632 QFVMEPKDAAIEMLEQILMGGDKKSRSITALSLISANGIPALIKCL--DRVEVRRSIVSI 689
+ V D A+ +L + D KS +++ AN +PALI L D+ R + +I
Sbjct: 512 RMV----DEALTILSVLANNQDAKS------AIVKANTLPALIGILQTDQTRNRENAAAI 561
Query: 690 LLCCMHADKSCKTLIAKRIELSHVLDLFHDGNDSVRGICINFL 732
LL D I + + ++DL +G + + I+ L
Sbjct: 562 LLSLCKRDTEKLITIGRLGAVVPLMDLSKNGTERGKRKAISLL 604
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P +F CPI+ ++ DPV + +GQTYER IQ+WL G+ TCP T+QPL SL N+VL
Sbjct: 229 PDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSL-TPNFVL 287
Query: 401 KRLITSWKE 409
K LI+ W E
Sbjct: 288 KSLISQWCE 296
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 111/253 (43%), Gaps = 16/253 (6%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
PKDFVCPI+ + DPV + TGQTY+R +I W++ G+ TCP T Q L + + N L
Sbjct: 306 PKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVP-NRAL 364
Query: 401 KRLITSWKEQYPDLAQEFSYSETPKHSFGSS-PLKDMTLA--SSPSRTFNFHIHNNTDDH 457
K LI W ++ E ++++P SF S+ P K A ++ S + +
Sbjct: 365 KNLIVQWCTA-SGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGSQAAQ 423
Query: 458 INERRKRFTQAANATSPTSVISQASVETIINGLKPYVTCLCTSENLQECETAVLAIARLW 517
R+ A + I++A G P++ L TSEN E +V A+ L
Sbjct: 424 TVAAREIRLLAKTGKENRAYIAEA-------GAIPHLCRLLTSENAIAQENSVTAMLNLS 476
Query: 518 KESKGDPGVHAYLLKPTIINGFAEILSASLSREVLRTSVYILSELMVADESVGDILTSVD 577
K + + + + +L + L+ E + L L E I VD
Sbjct: 477 IYEKNKSRI---MEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAI-VD 532
Query: 578 SDFDCLAALLKNG 590
+ LA LL+NG
Sbjct: 533 QCVEALALLLQNG 545
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P DF CPI+ ++ DPV + +GQTYER I++W++ G++TCP T+Q L S +L NYVL
Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTL-TPNYVL 315
Query: 401 KRLITSWKE 409
+ LI W E
Sbjct: 316 RSLIAQWCE 324
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 340 PPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYV 399
PP++F CPI+ ++ DPV + +GQTYER+ I++WL+ G+ TCP T++ L S+ + NYV
Sbjct: 256 PPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIM-TPNYV 314
Query: 400 LKRLITSWKE 409
L+ LI W E
Sbjct: 315 LRSLIAQWCE 324
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 338 SRP---PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLP 394
SRP P +F CPI+ ++ DPV + TGQTYER I++W+ G+ TCP T+Q + +++L
Sbjct: 268 SRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSAL- 326
Query: 395 KTNYVLKRLITSWKE 409
NYVL+ LI+ W E
Sbjct: 327 TPNYVLRSLISQWCE 341
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 338 SRP---PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLP 394
SRP P +F CPI+ ++ DPV + TGQTYER I++W+ G+ TCP T+Q + +++L
Sbjct: 268 SRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSAL- 326
Query: 395 KTNYVLKRLITSWKE 409
NYVL+ LI+ W E
Sbjct: 327 TPNYVLRSLISQWCE 341
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P DF CPI+ +I +DPV L++G T++R +IQ+W+ GN TCPIT+ PL N+ L
Sbjct: 6 PNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHAL 65
Query: 401 KRLI-----TSWKE-QYPDLAQEFSYSET 423
+ LI S KE P QE S+S++
Sbjct: 66 RSLILNFAHVSLKESSRPRTQQEHSHSQS 94
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P +F+CPIT +I DPV + TGQTYE+++IQ+W G+ TCP TRQ L SL N+ L
Sbjct: 291 PHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLA-PNFAL 349
Query: 401 KRLITSWKEQ 410
K LI W E+
Sbjct: 350 KNLIMQWCEK 359
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Query: 323 QSCNSLPCSEKMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCP 382
+SCN+ S +M S PP++ CPI+ Q+ DPV + +GQTYER I++W G+ TCP
Sbjct: 265 RSCNNNRRSSQM---SVPPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCP 321
Query: 383 ITRQPLCSNSLPKTNYVLKRLITSWKEQ 410
T Q L S+ NY +K LI+SW EQ
Sbjct: 322 KTHQQL-SHLCLTPNYCVKALISSWCEQ 348
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P F CPI+ + +DPVT+ TGQTY+R +I W+ GNTTCP+TR L +L N+ L
Sbjct: 15 PYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTL-IPNHTL 73
Query: 401 KRLITSW 407
+RLI W
Sbjct: 74 RRLIQEW 80
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 333 KMTSRSRPP---KDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLC 389
++ SR R P + F CPI+ ++ DPV + TGQTYER +IQ+WL G+ TCP +++ L
Sbjct: 238 RIVSRHRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLL 297
Query: 390 SNSLPKTNYVLKRLITSWKE 409
L NYVLK LI W E
Sbjct: 298 HAGL-TPNYVLKSLIALWCE 316
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRG-NTTCPITRQPLCSNSLPKTNYV 399
P F CPI+ ++ DPVT+ TGQTY+R +I+ W+ G NTTCP+TR PL +L N+
Sbjct: 15 PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTL-IPNHT 73
Query: 400 LKRLITSW 407
L+RLI W
Sbjct: 74 LRRLIQEW 81
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 340 PPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYV 399
PP++ CPI+ Q+ DPV + +GQTYER I++W G+ +CP T+Q L SL NY
Sbjct: 275 PPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSL-TPNYC 333
Query: 400 LKRLITSWKEQ 410
+K LI SW EQ
Sbjct: 334 VKGLIASWCEQ 344
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 19/117 (16%)
Query: 340 PPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYV 399
PP++ CPI+ Q+ DPV + +GQTYER I++W G+ TCP T+Q L SL N V
Sbjct: 272 PPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCV 331
Query: 400 LKRLITSWKEQY-------PDLAQEFSY-------SETPK----HSFGSSPLKDMTL 438
K LI SW EQ P +Q+ Y SE+ K +S GS LK + +
Sbjct: 332 -KGLIASWCEQNGTQIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSYKLKGVKI 387
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 304 SKSNMRGPSSPCNESDEGSQSCNSLPCSEKMTSRSRPPKDFVCPITGQIFNDPVTLETGQ 363
SK + GPS+P + + S + P DF CPIT ++ DPV + TGQ
Sbjct: 249 SKCVLYGPSTPAPDFRR-----------HQSLSDANIPADFRCPITLELMRDPVVVATGQ 297
Query: 364 TYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVLKRLITSW 407
TY+R++I W++ G+ TCP T Q L SL N LK LI W
Sbjct: 298 TYDRESIDLWIQSGHNTCPKTGQVLKHTSL-VPNRALKNLIVLW 340
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 10/86 (11%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P++F CP++ ++ DPV L +GQTY++ IQ+WL GN TCP T+Q L +L N ++
Sbjct: 75 PEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALT-PNLLI 133
Query: 401 KRLITSW--------KEQY-PDLAQE 417
+ +I+ W K QY P+L E
Sbjct: 134 REMISKWCKKNGLETKSQYHPNLVNE 159
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 334 MTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSL 393
M RS D CPI+ +I +DPV LE+G TY+R +I +W GN TCP T + L S L
Sbjct: 272 MMVRSLNVDDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVL 331
Query: 394 PKTNYVLKRLITSWKEQ 410
N+ +K++I S+ +Q
Sbjct: 332 VD-NFSVKQVIQSYSKQ 347
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
PK+F CPI+ + DPV TGQTY+R +I +W++ G++TCP + Q L + L N L
Sbjct: 298 PKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRL-VPNRAL 356
Query: 401 KRLITSWKEQY 411
+ LI+ W Y
Sbjct: 357 RSLISQWCGVY 367
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 339 RPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNY 398
R P DF C ++ ++ DPV + +GQT+ER IQ+W+ G CP TRQ L +L N+
Sbjct: 239 RVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTL-TPNF 297
Query: 399 VLKRLITSWKEQ---YPDLAQEFSYSETP 424
+++ + SW E YP E +S P
Sbjct: 298 IVRAFLASWCETNNVYPPDPLELIHSSEP 326
>sp|Q9CAA7|PUB42_ARATH Putative U-box domain-containing protein 42 OS=Arabidopsis thaliana
GN=PUB42 PE=2 SV=1
Length = 1033
Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 311 PSSPCNESDEGSQS-----CNSLPCSEKMTSRSRPP-KDFVCPITGQIFNDPVTLETGQT 364
P P S+ SQ SL ++T PP + F+CP+T +I DPVT ETG T
Sbjct: 211 PDIPSQSSNASSQRKYGNLSESLSMLPQVTQFMEPPYQAFICPLTKEIMEDPVTTETGVT 270
Query: 365 YERKAIQEWLKR-GNT---TCPITRQPLCSNSLPKTNYVLKRLITSWK 408
ER+A+ EW GN+ CP+T Q L + N VLK +I WK
Sbjct: 271 CERQAVIEWFDSFGNSDEINCPVTGQKLTTE--LSANVVLKTIIQEWK 316
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P F+CPI+ +I DPVT +G TY+R+ I +WL++ +CP+T+QPL +S N++L
Sbjct: 11 PNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKV-PSCPVTKQPLPLDSDLTPNHML 69
Query: 401 KRLITSW 407
+RLI W
Sbjct: 70 RRLIQHW 76
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 343 DFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVLKR 402
DF CP++ ++ DPV + +GQTYE+ I+ W+ G CP TRQ L +L NY +K
Sbjct: 233 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTL-IPNYTVKA 291
Query: 403 LITSWKE----QYPDLAQEFSYSE 422
LI +W E + PD + S +E
Sbjct: 292 LIANWCETNDVKLPDPNKSTSLNE 315
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P F+CPI+ + DPVTL TGQTYER I +W G+ TCP T Q L + L N L
Sbjct: 61 PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQEL-WDDLVTPNKTL 119
Query: 401 KRLITSWKEQ 410
+LI +W Q
Sbjct: 120 HQLIYTWFSQ 129
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P F+CPI+ + DPVTL TGQTYER I +W G+ TCP T Q L +++ N L
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTV-TPNKTL 123
Query: 401 KRLITSWKEQ 410
LI +W Q
Sbjct: 124 HHLIYTWFSQ 133
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Query: 337 RSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLP-- 394
R +D +CPI+ +I DPV +ETG TY+R +I +W GN TCPIT + L S L
Sbjct: 285 RGLKVEDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDN 344
Query: 395 -----------KTNYVLKRLITSWKEQYPDLAQE 417
KTN ++ I+ ++ + D+ E
Sbjct: 345 VSVRQVIRKHCKTNGIVLAGISRRRKSHDDVVPE 378
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRG-NTTCPITRQPLCSNSLPKTNYV 399
P F+CPI+ I DPV + TG TY+R++I++WL G +CP+T+Q + L N+
Sbjct: 8 PSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDL-TPNHT 66
Query: 400 LKRLITSW 407
L+RLI SW
Sbjct: 67 LRRLIQSW 74
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P F CPI+ + PV+L TG TY+R +IQ WL GN TCP T Q L N N L
Sbjct: 12 PCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQIL-QNKEFVPNLTL 70
Query: 401 KRLITSWKEQYPDLAQ-EFSYSETP 424
RLI W + A E S+TP
Sbjct: 71 HRLIDHWSDSINRRADSESPESDTP 95
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRG-NTTCPITRQPLCSNSLPKTNYV 399
P F+CPI+ +I DPV + TG TY+R +I++WL G +CP+T+Q + L N+
Sbjct: 13 PPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADL-TPNHT 71
Query: 400 LKRLITSW 407
L+RLI SW
Sbjct: 72 LRRLIQSW 79
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P F CP++ ++ DPV + +GQT++R +I++WL G CP TRQ L L NY +
Sbjct: 239 PPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIP-NYTV 297
Query: 401 KRLITSWKE 409
K +I SW E
Sbjct: 298 KAMIASWLE 306
>sp|Q9SW11|PUB35_ARATH U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35
PE=1 SV=2
Length = 835
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 338 SRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCS-NSLPKT 396
++PP F+CP+ + N+P G TY+R AI+EWLK NT+ P+T PL S N LP
Sbjct: 764 TQPPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHNTS-PMTDSPLHSKNLLP-- 820
Query: 397 NYVLKRLITSWK 408
NY L I W+
Sbjct: 821 NYTLYTAIMEWR 832
>sp|Q9FKG6|PUB52_ARATH U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52
PE=2 SV=1
Length = 845
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 24/175 (13%)
Query: 252 NSDSSTRTKVIPMLPIAEPPATPLHEFSRSIPDYVKFGPVLPKSAGFSAVLKSK------ 305
SD + VI L A+P H +I D +F +L K AG + ++
Sbjct: 673 KSDVYSLGVVILQLITAKPAIAITHMVEEAIGDDAEFMAILDKKAGSWPISDTRELAALG 732
Query: 306 ---SNMRGPSSPCNESDEGSQSCNSLPCSEKMTSRSR---------PPKDFVCPITGQIF 353
+ MR P D Q +L K+ +++ PP F+CP+ +
Sbjct: 733 LCCTEMRRRDRP----DLKDQIIPALERLRKVADKAQNLLSRTPSGPPSHFICPLLKGVM 788
Query: 354 NDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVLKRLITSWK 408
N+P G TY+R+AI+EWL++ +T+ P+T PL + +L NY L I WK
Sbjct: 789 NEPCVAADGYTYDREAIEEWLRQKDTS-PVTNLPLPNKNL-IANYTLYSAIMEWK 841
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 327 SLPCSEKMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQ 386
S P SE + + PP +F CPI+ + DPV + TG TY+R +I+ W+ GN TCP+T
Sbjct: 19 SWPESEPESEITIPP-EFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNT 77
Query: 387 PLCS-NSLPKTNYVLKRLITSW 407
L + + +P N+ ++++I W
Sbjct: 78 VLTTFDQIP--NHTIRKMIQGW 97
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P F CPI+ + PV+L TG TY+R +IQ WL GN TCP T Q L + N L
Sbjct: 13 PSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVP-NLTL 71
Query: 401 KRLITSWKE 409
+RLI W +
Sbjct: 72 QRLINIWSD 80
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNS-LPKTNYV 399
P F CPI+ + PV+L TG TY+R +IQ WL GN TCP T Q L + +P N
Sbjct: 11 PTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIP--NRT 68
Query: 400 LKRLITSWKE 409
L+RLI W +
Sbjct: 69 LQRLIEIWSD 78
>sp|Q3E9F7|PUB46_ARATH Putative U-box domain-containing protein 46 OS=Arabidopsis thaliana
GN=PUB46 PE=3 SV=1
Length = 458
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
PK+F+C ++ I +PV + +GQTYE++ I EWLK TCP T+Q L S+ L N+++
Sbjct: 73 PKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVL-SHRLWIPNHLI 130
Query: 401 KRLITSW 407
LIT W
Sbjct: 131 SDLITQW 137
>sp|Q94A51|PUB32_ARATH U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32
PE=2 SV=1
Length = 805
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Query: 298 FSAVLKSKSNMRGPSSPCNESDEGSQSCNSLPCSEKMTSRSRPPKDFVCPITGQIFNDPV 357
+ VL+ M+ P P +E+ S + ++P RPP ++CPI ++ DP+
Sbjct: 703 LAVVLRFIDRMKAPEVPSSET--SSYANQNVP--------RRPPSHYLCPIFQEVMKDPL 752
Query: 358 TLETGQTYERKAIQEWLKRGNTTCPITRQPL--CSNSLPKTNYVLKRLITSWKEQY 411
G TYE +AI+EWL G+ T P+T + C N +P N+ L I W+ Q+
Sbjct: 753 IAADGFTYEAEAIREWLANGHDTSPMTNLKMEDC-NLIP--NHALHLAIQDWQNQW 805
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCS-NSLPKTNYV 399
P F CPI+ ++ DPV + +G TY+R+ I++W + G TCP+T L S +P N+
Sbjct: 34 PSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIP--NHT 91
Query: 400 LKRLITSW 407
++R+I W
Sbjct: 92 IRRMIQGW 99
>sp|Q9LM76|PUB44_ARATH U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44
PE=1 SV=1
Length = 801
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Query: 344 FVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNT-----TCPITRQPLCSNSLPKTNY 398
F+CP+T ++ +DPVTLE G+T+ER+AI++W K +CP+T Q L S + +
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDV-SASI 85
Query: 399 VLKRLITSWKEQ 410
L+ I W+ +
Sbjct: 86 ALRNTIEEWRSR 97
>sp|Q9SFX2|PUB43_ARATH U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43
PE=2 SV=1
Length = 811
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 19/99 (19%)
Query: 320 EGSQSCNSLPCSEKMTSRSRPPKD-----FVCPITGQIFNDPVTLETGQTYERKAIQEWL 374
+GSQS NS S+ P D F+CP+T Q+ ++PVTLE GQT+ER+AI++W
Sbjct: 8 DGSQSDNS--------SQFEPGIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWF 59
Query: 375 K--RGN---TTCPITRQPLCSNSLPKTNYVLKRLITSWK 408
+ R N +CPIT + L L + L+ I W+
Sbjct: 60 QECRENGQPLSCPITSKELSITDLSPS-IALRNTIEEWR 97
>sp|Q8MY12|MHCKC_DICDI Myosin heavy chain kinase C OS=Dictyostelium discoideum GN=mhkC PE=1
SV=1
Length = 780
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 115/259 (44%), Gaps = 26/259 (10%)
Query: 1018 NATELWHCNEVTELDSSTNGEVLSLIHLKGRVLSSHSDGTIKMWDSGKRVLRLIQEVREH 1077
+A EL H + S V+ +L++ +D +K WD + + I+E++E
Sbjct: 537 DAVELKHVTNIKAHGKSIRA-VIKRPGFDQNILTAGADSLVKEWDINTQ--QTIKEIKE- 592
Query: 1078 TRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEE-IHCLQVHNVKEAVHELTANAEIACF 1136
+ V +++ + LY+G DKT++VW ++ E + L H A+ + A +
Sbjct: 593 SNEVNTIFI--QDNLLYTGCNDKTVKVWDMRSYECVKTLSGHT--RAIKSVCAMGNL--L 646
Query: 1137 VSPATGVKVYNWSGAIKHI--NFNKH---VKSLVMTGDKLYCGCSGYSIQEVDLGNLTST 1191
S + ++Y W+ A I NF H VK+L + LY G +I+ DL T
Sbjct: 647 FSGSNDQQIYVWNLATGTILTNFQGHEGWVKTLYAHNNMLYSGSHDETIRIWDL----KT 702
Query: 1192 TFYAGTKKLLGKQTIHSLHMHNGLLFAGGSSVDGTAGKVFSISSKTAVGSFTTGIDIQHL 1251
T T K K + +LH+ N +FAG G +VFS + S T I L
Sbjct: 703 TRCVNTIKC--KDRVETLHVTNQGIFAGS----GDWLQVFSHDKYENLASLNTRSSILCL 756
Query: 1252 AVNSDFIFTATKCGTIEVW 1270
N + +FT + ++VW
Sbjct: 757 WRNQNQLFTGSLASNLKVW 775
Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 1089 SGD--KLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHELTANAEIACF----VSPATG 1142
+GD +LYSGS D I VW + + V N+K + A + F ++
Sbjct: 518 TGDSLRLYSGSNDGQIGVW----DAVELKHVTNIKAHGKSIRAVIKRPGFDQNILTAGAD 573
Query: 1143 VKVYNWS----GAIKHINFNKHVKSLVMTGDKLYCGCSGYSIQEVDLGNLTSTTFYAGTK 1198
V W IK I + V ++ + + LY GC+ +++ D+ + Y K
Sbjct: 574 SLVKEWDINTQQTIKEIKESNEVNTIFIQDNLLYTGCNDKTVKVWDMRS------YECVK 627
Query: 1199 KLLGK-QTIHSLHMHNGLLFAGGSSVDGTAGKVFSISSKTAVGSFTTGID-IQHLAVNSD 1256
L G + I S+ LLF+G + V+++++ T + +F ++ L +++
Sbjct: 628 TLSGHTRAIKSVCAMGNLLFSGSND---QQIYVWNLATGTILTNFQGHEGWVKTLYAHNN 684
Query: 1257 FIFTATKCGTIEVW 1270
+++ + TI +W
Sbjct: 685 MLYSGSHDETIRIW 698
>sp|A0AUS0|WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio
GN=wdsub1 PE=2 SV=1
Length = 487
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P +F+CPIT +I DPV G +YER+AI+ W+ N T P+T PL +L N L
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPL-QTTLLTPNRTL 476
Query: 401 KRLITSW 407
K I W
Sbjct: 477 KMAIFRW 483
Score = 39.3 bits (90), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1048 RVLSSHSDGTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSI 1107
++S SDG+I +WD R LR V + T V C + P G +GS +R+W +
Sbjct: 111 HLVSGGSDGSIALWDFTSRTLRRTGVVND-TSIVACSFTP-CGQMFITGSTYGDLRLWDL 168
Query: 1108 KPEEIH 1113
+H
Sbjct: 169 NMNHLH 174
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 341 PKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNYVL 400
P+ F C ++ + DPV + +G T+ER IQ+W GN +CPI+++ L +L K N L
Sbjct: 220 PEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTL-KPNVEL 278
Query: 401 KRLITSW 407
K I+ W
Sbjct: 279 KSQISEW 285
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 339 RPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCSNSLPKTNY 398
+PP F+CPI+ ++ +P G TYE ++++EWL G+ T P+T L N+L N+
Sbjct: 496 QPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLV-PNH 554
Query: 399 VLKRLITSW 407
L+ I W
Sbjct: 555 ALRSAIQEW 563
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 332 EKMTSRSR-PPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPLCS 390
E TS R PP+ F+CPIT I DP G TYE +AI W +RG+ T P+ + L
Sbjct: 344 EASTSNHREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPH 403
Query: 391 NSLPKTNYVLKRLITSW 407
SL N L+ I W
Sbjct: 404 TSLV-PNLALRSAIQEW 419
>sp|Q0DR28|PUB57_ORYSJ U-box domain-containing protein 57 OS=Oryza sativa subsp. japonica
GN=PUB57 PE=2 SV=1
Length = 518
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 329 PCSEKMTSRSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEWLKRGNTTCPITRQPL 388
P + + S P F+CPI+ +I DP G TYE +AI+ W RG I+R P+
Sbjct: 424 PYLQSASGDSSVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRG-----ISRSPM 478
Query: 389 CSNSLPKTNYVLKRLITSW-----KEQYPDLAQEFSYSET 423
+ +LP N V R++ S+ ++Q P+ A + SET
Sbjct: 479 TNLALPNLNLVPNRVLRSFIHGYLQQQQPNPAYQQQLSET 518
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 464,078,841
Number of Sequences: 539616
Number of extensions: 19003402
Number of successful extensions: 56740
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 602
Number of HSP's that attempted gapping in prelim test: 53930
Number of HSP's gapped (non-prelim): 2938
length of query: 1306
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1176
effective length of database: 121,419,379
effective search space: 142789189704
effective search space used: 142789189704
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)