Query 000744
Match_columns 1306
No_of_seqs 1035 out of 5232
Neff 7.8
Searched_HMMs 29240
Date Tue Mar 26 16:24:41 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000744.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_516-520//hhsearch_pdb/000744hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 1.0 1 1 293.6 36.0 267 994-1272 101-409 (410)
2 1nr0_A Actin interacting prote 1.0 1 1 285.3 41.1 297 993-1303 139-594 (611)
3 1nr0_A Actin interacting prote 1.0 1 1 285.1 38.3 303 995-1306 97-552 (611)
4 3dm0_A Maltose-binding peripla 1.0 1 1 281.1 36.4 273 991-1274 372-693 (694)
5 3ow8_A WD repeat-containing pr 1.0 1 1 281.0 36.0 265 992-1306 23-306 (321)
6 2ynn_A Coatomer subunit beta'; 1.0 1 1 278.7 38.7 264 992-1303 4-283 (304)
7 1got_B GT-beta; complex (GTP-b 1.0 1 1 274.8 39.4 265 992-1306 46-328 (340)
8 2ymu_A WD-40 repeat protein; u 1.0 1 1 273.3 44.3 295 992-1306 253-565 (577)
9 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 271.4 36.6 101 1205-1306 1087-1194(1249)
10 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 270.5 37.6 98 1202-1305 1001-1100(1249)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=1.00 E-value=1 Score=293.61 Aligned_cols=267 Identities=19% Similarity=0.284 Sum_probs=181.1
Q ss_pred CCCCCCCCCCCCCCC-----CEEEEEECCCCEEEEECCC--CEEECCCCCCCEEEEEEECC--EEEEEECCCCEEEEECC
Q ss_conf 312322222323452-----1999981799099993997--45872668987899999599--99999889929999588
Q 000744 994 LRKLKKYSAVVTDIQ-----KALMNLSSVNATELWHCNE--VTELDSSTNGEVLSLIHLKG--RVLSSHSDGTIKMWDSG 1064 (1306)
Q Consensus 994 l~~l~ghs~~V~~i~-----~~Lasgs~Dg~I~IWd~~~--~~~i~~~H~~~V~sI~fspd--~LaSgs~Dg~I~IWd~~ 1064 (1306)
...+.+|.+.|.++. .++++|+.||+|++||..+ ......+|.+.|++++|+|+ +|++|+.||+|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred EEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECC
T ss_conf 07661667768999996999989999389859999899993778881667868789985999999999189819999589
Q ss_pred CCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEE-CCCCCEEEEEE--CCC-EEEEECCC
Q ss_conf 885111789803586689999968999999995899399997689953699831-47888479972--792-79998299
Q 000744 1065 KRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEEIHCLQVH-NVKEAVHELTA--NAE-IACFVSPA 1140 (1306)
Q Consensus 1065 t~~~~~i~~l~~H~~~V~si~fspdg~~L~Sgs~DgtI~IWdi~~~~~~~i~~~-~~~~~V~si~~--~~~-~i~~s~dg 1140 (1306)
++ +++.++.+|...|++++|+|+++++++|+.|++|++||++++ .++..+ .|...|.++.+ ++. +++.+.|+
T Consensus 181 ~~--~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~--~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 181 GF--ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp SS--CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CC--CEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCC--CEEEEEECCCCCEEEEEECCCCCEEEEECCCC
T ss_conf 98--266998289997789999679999999968996999989999--48999927886289999989999999991899
Q ss_pred CEEEEEEECCC---EEEECCCCCEEEEEEECC----------------------EEEEEECCCCEEEEECCCCCEEEEEC
Q ss_conf 94999982597---898426998689999199----------------------99999789819999899992468831
Q 000744 1141 TGVKVYNWSGA---IKHINFNKHVKSLVMTGD----------------------KLYCGCSGYSIQEVDLGNLTSTTFYA 1195 (1306)
Q Consensus 1141 ~~I~i~~~~~~---~~l~~~~~~V~si~~s~~----------------------~L~sgs~Dg~I~iwDl~~~~~~~~~~ 1195 (1306)
. +.+|+.... ..+..|...|.++.|+|+ ++++|+.|+.|++||++++.+...+.
T Consensus 257 ~-v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~ 335 (410)
T 1vyh_C 257 T-VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 335 (410)
T ss_dssp C-EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred E-EEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEE
T ss_conf 0-999989897436673378745899998586554310121255555667888899999389849999889996699997
Q ss_pred CCCCCCCCC-CEEEEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEEEC-CCCEEEEEECCC--EEEEEECCCCEEEEE
Q ss_conf 732212886-5799999389689999954998799997899935899806-997899999286--999998899099998
Q 000744 1196 GTKKLLGKQ-TIHSLHMHNGLLFAGGSSVDGTAGKVFSISSKTAVGSFTT-GIDIQHLAVNSD--FIFTATKCGTIEVWL 1271 (1306)
Q Consensus 1196 ~~~~l~gh~-~I~si~~s~~~~li~s~s~Dg~~I~IWD~~s~~~i~~l~~-~~~V~sia~spd--~Lasgs~Dg~I~IWd 1271 (1306)
+|. +|+++.|++++.++++++.|+ +|++||..+++++.++.+ ...|++++|+|+ ++++|+.||+|++|+
T Consensus 336 ------~h~~~v~~v~~~~~g~~l~s~s~D~-~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 336 ------GHDNWVRGVLFHSGGKFILSCADDK-TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp ------CCSSCEEEEEECSSSSCEEEEETTT-EEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred ------CCCCCEEEEEECCCCCEEEEEECCC-EEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEE
T ss_conf ------7888589999949989999995979-299998999906899847778689999828999999992799489973
Q ss_pred C
Q ss_conf 8
Q 000744 1272 K 1272 (1306)
Q Consensus 1272 ~ 1272 (1306)
.
T Consensus 409 ~ 409 (410)
T 1vyh_C 409 C 409 (410)
T ss_dssp -
T ss_pred C
T ss_conf 7
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=285.31 Aligned_cols=297 Identities=13% Similarity=0.155 Sum_probs=166.3
Q ss_pred CCCCCCCCCCCCCCCC------CEEEEEECCCCEEEEECCCC--EEECCCCCCCEEEEEEECC--EEEEEECCCCEEEEE
Q ss_conf 2312322222323452------19999817990999939974--5872668987899999599--999998899299995
Q 000744 993 TLRKLKKYSAVVTDIQ------KALMNLSSVNATELWHCNEV--TELDSSTNGEVLSLIHLKG--RVLSSHSDGTIKMWD 1062 (1306)
Q Consensus 993 ~l~~l~ghs~~V~~i~------~~Lasgs~Dg~I~IWd~~~~--~~i~~~H~~~V~sI~fspd--~LaSgs~Dg~I~IWd 1062 (1306)
.+..+.+|.+.|.++. ..|++|+.|++|++||..+. .....+|.+.|++++|+|+ +|++|+.||+|++||
T Consensus 139 ~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd 218 (611)
T 1nr0_A 139 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYN 218 (611)
T ss_dssp BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCEECCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEE
T ss_conf 76325478898369998899982999992898099997999757665200257169999979999899998999199988
Q ss_pred CCCCCCCEEEEEC-------CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCC-EEEEE------------------
Q ss_conf 8888511178980-------358668999996899999999589939999768995-36998------------------
Q 000744 1063 SGKRVLRLIQEVR-------EHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEE-IHCLQ------------------ 1116 (1306)
Q Consensus 1063 ~~t~~~~~i~~l~-------~H~~~V~si~fspdg~~L~Sgs~DgtI~IWdi~~~~-~~~i~------------------ 1116 (1306)
..++ +++..+. +|.+.|++++|+|++++|++++.|++|++||+.+++ ...+.
T Consensus 219 ~~~g--~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (611)
T 1nr0_A 219 GVDG--TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA 296 (611)
T ss_dssp TTTC--CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC
T ss_pred CCCC--CEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCE
T ss_conf 9998--28665136643235667878999997999999999089809999688870134404788766406899973887
Q ss_pred ----------------------E-ECCCCCEEEEEE---CCCEEEEECCCCEEEEEEECCC-------------------
Q ss_conf ----------------------3-147888479972---7927999829994999982597-------------------
Q 000744 1117 ----------------------V-HNVKEAVHELTA---NAEIACFVSPATGVKVYNWSGA------------------- 1151 (1306)
Q Consensus 1117 ----------------------~-~~~~~~V~si~~---~~~~i~~s~dg~~I~i~~~~~~------------------- 1151 (1306)
. ..|...|.+++| ...++..+.|+. |++|+....
T Consensus 297 l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~-v~~Wd~~~~~~~~~~~~~h~~~v~~~~~ 375 (611)
T 1nr0_A 297 LVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGH-INSWDISTGISNRVFPDVHATMITGIKT 375 (611)
T ss_dssp EEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCCEEECSSCSCSSCEEEEEE
T ss_pred EEEEECCCCEEEEECCCCCCCEEECCCCCCEEEEEEECCCCEEEEEECCCC-EEEEECCCCCEEEECCCCCCCEEEEEEE
T ss_conf 999958996899968899744698378888899999189998999958984-9999788792563216677650789998
Q ss_pred --------------EEE----------------------------------------------------ECCCCCEEEEE
Q ss_conf --------------898----------------------------------------------------42699868999
Q 000744 1152 --------------IKH----------------------------------------------------INFNKHVKSLV 1165 (1306)
Q Consensus 1152 --------------~~l----------------------------------------------------~~~~~~V~si~ 1165 (1306)
+++ ..+...+.+++
T Consensus 376 s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va 455 (611)
T 1nr0_A 376 TSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVA 455 (611)
T ss_dssp CTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEE
T ss_pred CCCCCEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEEEECCEEEEEECCCEEEEECCCCCEEEE
T ss_conf 78996999984896689546885435652120014899707998079969999967639998489434640688954999
Q ss_pred EECC--EEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCC-CEEEEEEECCCEEEEEEECCCCEEEEEECCC-CCEEEE
Q ss_conf 9199--99999789819999899992468831732212886-5799999389689999954998799997899-935899
Q 000744 1166 MTGD--KLYCGCSGYSIQEVDLGNLTSTTFYAGTKKLLGKQ-TIHSLHMHNGLLFAGGSSVDGTAGKVFSISS-KTAVGS 1241 (1306)
Q Consensus 1166 ~s~~--~L~sgs~Dg~I~iwDl~~~~~~~~~~~~~~l~gh~-~I~si~~s~~~~li~s~s~Dg~~I~IWD~~s-~~~i~~ 1241 (1306)
|+|+ ++++|+.|+.|++||+.++...... ..+|. .|+++.|+|++.++++++.|+ +|++|+..+ +++...
T Consensus 456 ~spdg~~lasgs~D~~v~lwd~~~~~~~~~~-----~~~h~~~v~~v~fspdg~~las~s~d~-~v~~w~~~~~~~~~~~ 529 (611)
T 1nr0_A 456 LSNDKQFVAVGGQDSKVHVYKLSGASVSEVK-----TIVHPAEITSVAFSNNGAFLVATDQSR-KVIPYSVANNFELAHT 529 (611)
T ss_dssp ECTTSCEEEEEETTSEEEEEEEETTEEEEEE-----EEECSSCEEEEEECTTSSEEEEEETTS-CEEEEEGGGTTEESCC
T ss_pred EECCCCEEEEECCCCEEEEEECCCCCEEEEE-----CCCCCCCEEEEEECCCCCEEEEECCCC-CEEEEECCCCCCEEEE
T ss_conf 9289989999689973999994599222410-----157788607999989999899994899-8999885778722321
Q ss_pred --EE-CCCCEEEEEECCC--EEEEEECCCCEEEEECCCCE-EE-EEEECCCCCCC-CCCEEEEEECCCCC
Q ss_conf --80-6997899999286--99999889909999889990-88-99964668888-87758999918999
Q 000744 1242 --FT-TGIDIQHLAVNSD--FIFTATKCGTIEVWLKERVT-RV-ASVKANNSGGG-HAKITCLGTGVDGH 1303 (1306)
Q Consensus 1242 --l~-~~~~V~sia~spd--~Lasgs~Dg~I~IWd~~tg~-~i-~~l~~~~~~~~-~~~V~siafSpdg~ 1303 (1306)
+. |...|++++|+|+ +|++|+.|++|++|++.++. .. ..+. .| ...|++++|+||++
T Consensus 530 ~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~-----~h~~~~v~~v~fs~d~~ 594 (611)
T 1nr0_A 530 NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKG-----AHAMSSVNSVIWLNETT 594 (611)
T ss_dssp CCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETT-----SSTTSCEEEEEEEETTE
T ss_pred EEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCHHHC-----CCCCCCEEEEEECCCCE
T ss_conf 026404664258998998997999979972999978875556326444-----67656711899858997
No 3
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=285.15 Aligned_cols=303 Identities=17% Similarity=0.188 Sum_probs=219.3
Q ss_pred CCCCCCCCCCCCCC-----CEEEEEECC----CCEEEEECCCCEEECCCCCCCEEEEEEECC---EEEEEECCCCEEEEE
Q ss_conf 12322222323452-----199998179----909999399745872668987899999599---999998899299995
Q 000744 995 RKLKKYSAVVTDIQ-----KALMNLSSV----NATELWHCNEVTELDSSTNGEVLSLIHLKG---RVLSSHSDGTIKMWD 1062 (1306)
Q Consensus 995 ~~l~ghs~~V~~i~-----~~Lasgs~D----g~I~IWd~~~~~~i~~~H~~~V~sI~fspd---~LaSgs~Dg~I~IWd 1062 (1306)
..+++|.+.|.++. ++|++++.+ +.|++||.........+|.+.|++++|+|+ .|++|+.|++|++||
T Consensus 97 ~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd 176 (611)
T 1nr0_A 97 TTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFE 176 (611)
T ss_dssp EEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEE
T ss_pred EEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCEECCCCCCCEEEEECCCCCEEEEEEECCCEEEEEE
T ss_conf 76225578448999899999799998997736699996389976325478898369998899982999992898099997
Q ss_pred CCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEE--------CCCCCEEEEEE--CCC
Q ss_conf 88885111789803586689999968999999995899399997689953699831--------47888479972--792
Q 000744 1063 SGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEEIHCLQVH--------NVKEAVHELTA--NAE 1132 (1306)
Q Consensus 1063 ~~t~~~~~i~~l~~H~~~V~si~fspdg~~L~Sgs~DgtI~IWdi~~~~~~~i~~~--------~~~~~V~si~~--~~~ 1132 (1306)
..++ ++..++.+|...|++++|+|+++++++|+.|++|++||..+++ +...+ .|.+.|.++.| ++.
T Consensus 177 ~~~~--~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~--~~~~~~~~~~~~~~h~~~V~~v~~spdg~ 252 (611)
T 1nr0_A 177 GPPF--KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT--KTGVFEDDSLKNVAHSGSVFGLTWSPDGT 252 (611)
T ss_dssp TTTB--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--EEEECBCTTSSSCSSSSCEEEEEECTTSS
T ss_pred CCCC--EEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCC--EEEEECCCCCCCCCCCCCEEEEEECCCCC
T ss_conf 9997--5766520025716999997999989999899919998899982--86651366432356678789999979999
Q ss_pred -EEEEECCCCEEEEEEECCCE----------------------------------------------EEECCCCCEEEEE
Q ss_conf -79998299949999825978----------------------------------------------9842699868999
Q 000744 1133 -IACFVSPATGVKVYNWSGAI----------------------------------------------KHINFNKHVKSLV 1165 (1306)
Q Consensus 1133 -~i~~s~dg~~I~i~~~~~~~----------------------------------------------~l~~~~~~V~si~ 1165 (1306)
+++.+.|+ .+++|+..... .+.+|...|++++
T Consensus 253 ~l~s~s~D~-~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~ 331 (611)
T 1nr0_A 253 KIASASADK-TIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALS 331 (611)
T ss_dssp EEEEEETTS-EEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEEEEECCC-EEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCEEEEEECCCCEEEEECCCCCCCEEECCCCCCEEEEE
T ss_conf 999990898-0999968887013440478876640689997388799995899689996889974469837888889999
Q ss_pred EECC--EEEEEECCCCEEEEECCCCCEEEEEC-CCC-----------------------------------------C--
Q ss_conf 9199--99999789819999899992468831-732-----------------------------------------2--
Q 000744 1166 MTGD--KLYCGCSGYSIQEVDLGNLTSTTFYA-GTK-----------------------------------------K-- 1199 (1306)
Q Consensus 1166 ~s~~--~L~sgs~Dg~I~iwDl~~~~~~~~~~-~~~-----------------------------------------~-- 1199 (1306)
|+|+ ++++++.|+.|++||+.++.....+. ++. .
T Consensus 332 ~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~ 411 (611)
T 1nr0_A 332 SSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLS 411 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECS
T ss_pred EECCCCEEEEEECCCCEEEEECCCCCEEEECCCCCCCEEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCCEEEEECC
T ss_conf 91899989999589849999788792563216677650789998789969999848966895468854356521200148
Q ss_pred --------------------------------CCCCC-CEEEEEEECCCEEEEEEECCCCEEEEEECCCCCE--EEEEEC
Q ss_conf --------------------------------12886-5799999389689999954998799997899935--899806
Q 000744 1200 --------------------------------LLGKQ-TIHSLHMHNGLLFAGGSSVDGTAGKVFSISSKTA--VGSFTT 1244 (1306)
Q Consensus 1200 --------------------------------l~gh~-~I~si~~s~~~~li~s~s~Dg~~I~IWD~~s~~~--i~~l~~ 1244 (1306)
...|. .+.+++|+|++.++++++.|+ +|++||+.++.. .....|
T Consensus 412 ~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~-~v~lwd~~~~~~~~~~~~~h 490 (611)
T 1nr0_A 412 SQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDS-KVHVYKLSGASVSEVKTIVH 490 (611)
T ss_dssp SCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTS-EEEEEEEETTEEEEEEEEEC
T ss_pred CCCCEEEEECCCCEEEEEECCEEEEEECCCEEEEECCCCCEEEEEECCCCEEEEECCCC-EEEEEECCCCCEEEEECCCC
T ss_conf 99707998079969999967639998489434640688954999928998999968997-39999945992224101577
Q ss_pred CCCEEEEEECCC--EEEEEECCCCEEEEECCC-CEEEEEEECCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf 997899999286--999998899099998899-90889996466888887758999918999238
Q 000744 1245 GIDIQHLAVNSD--FIFTATKCGTIEVWLKER-VTRVASVKANNSGGGHAKITCLGTGVDGHPYK 1306 (1306)
Q Consensus 1245 ~~~V~sia~spd--~Lasgs~Dg~I~IWd~~t-g~~i~~l~~~~~~~~~~~V~siafSpdg~~La 1306 (1306)
...|++++|+|+ ++++++.|++|++|++.+ +++...... +.|...|++++|+|||++||
T Consensus 491 ~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~---~~H~~~V~~v~fspdg~~la 552 (611)
T 1nr0_A 491 PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSW---TFHTAKVACVSWSPDNVRLA 552 (611)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCC---CCCSSCEEEEEECTTSSEEE
T ss_pred CCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEEEE---EECCCCEEEEEECCCCCEEE
T ss_conf 886079999899998999948998999885778722321026---40466425899899899799
No 4
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=1.00 E-value=1 Score=281.05 Aligned_cols=273 Identities=19% Similarity=0.234 Sum_probs=209.5
Q ss_pred HCCCCCCCCCCCCCCCCC------CEEEEEECCCCEEEEECCC-------CEEECCCCCCCEEEEEEECC--EEEEEECC
Q ss_conf 002312322222323452------1999981799099993997-------45872668987899999599--99999889
Q 000744 991 YGTLRKLKKYSAVVTDIQ------KALMNLSSVNATELWHCNE-------VTELDSSTNGEVLSLIHLKG--RVLSSHSD 1055 (1306)
Q Consensus 991 ~~~l~~l~ghs~~V~~i~------~~Lasgs~Dg~I~IWd~~~-------~~~i~~~H~~~V~sI~fspd--~LaSgs~D 1055 (1306)
++....+++|.+.|.++. ++|++|+.|++|++|++.. ......+|...|.+++|+|+ +|++|+.|
T Consensus 372 l~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D 451 (694)
T 3dm0_A 372 LVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 451 (694)
T ss_dssp SEEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEECCCCCCEEEEEECCCCCEEEEEECC
T ss_conf 64121104677406999866998888999808994899975688755553332425888847999997999999998089
Q ss_pred CCEEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEE--ECCCCCEEEEEECC--
Q ss_conf 92999958888511178980358668999996899999999589939999768995369983--14788847997279--
Q 000744 1056 GTIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEEIHCLQV--HNVKEAVHELTANA-- 1131 (1306)
Q Consensus 1056 g~I~IWd~~t~~~~~i~~l~~H~~~V~si~fspdg~~L~Sgs~DgtI~IWdi~~~~~~~i~~--~~~~~~V~si~~~~-- 1131 (1306)
|+|++||+.++ .++..+.+|...|++++|+|+++++++|+.|++|++||........+.. ..|...|.++.|.+
T Consensus 452 g~v~vwd~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 452 GELRLWDLAAG--VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp SEEEEEETTTT--EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS
T ss_pred CCEEEEECCCC--CCEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCEEECCCCCCCCCCEEEEEEECCC
T ss_conf 92899979999--5136886799988999990899989999488979999789985404303778887867999991798
Q ss_pred ---CEEEEECCCCEEEEEEECCC---EEEECCCCCEEEEEEECC--EEEEEECCCCEEEEECCCCCEEEEECCCCCCCCC
Q ss_conf ---27999829994999982597---898426998689999199--9999978981999989999246883173221288
Q 000744 1132 ---EIACFVSPATGVKVYNWSGA---IKHINFNKHVKSLVMTGD--KLYCGCSGYSIQEVDLGNLTSTTFYAGTKKLLGK 1203 (1306)
Q Consensus 1132 ---~~i~~s~dg~~I~i~~~~~~---~~l~~~~~~V~si~~s~~--~L~sgs~Dg~I~iwDl~~~~~~~~~~~~~~l~gh 1203 (1306)
.+++.+.|+. |++|+.... ..+.+|...|++++|+|+ .+++|+.||.|++||+.+++.+..+. .+
T Consensus 530 ~~~~l~s~s~d~~-v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~------~~ 602 (694)
T 3dm0_A 530 LQPTIVSASWDKT-VKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE------AN 602 (694)
T ss_dssp SSCEEEEEETTSC-EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB------CS
T ss_pred CCCEEEEEECCCE-EEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEEC------CC
T ss_conf 8655999968985-9999899992789986788888899991898989999589949999889995678833------89
Q ss_pred CCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEEECC--------------------CCEEEEEECCC--EEEEE
Q ss_conf 657999993896899999549987999978999358998069--------------------97899999286--99999
Q 000744 1204 QTIHSLHMHNGLLFAGGSSVDGTAGKVFSISSKTAVGSFTTG--------------------IDIQHLAVNSD--FIFTA 1261 (1306)
Q Consensus 1204 ~~I~si~~s~~~~li~s~s~Dg~~I~IWD~~s~~~i~~l~~~--------------------~~V~sia~spd--~Lasg 1261 (1306)
..|.+++|++++.++++++ |+ .|++||+.++.++..+..+ ..+++++|+|+ +|++|
T Consensus 603 ~~v~~~~~sp~~~~l~~~~-~~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sg 680 (694)
T 3dm0_A 603 SVIHALCFSPNRYWLCAAT-EH-GIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSG 680 (694)
T ss_dssp SCEEEEEECSSSSEEEEEE-TT-EEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEE
T ss_pred CCEEEEEECCCCCEEEEEC-CC-CEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEE
T ss_conf 9478999859986899976-99-789998999987332002456532002456645677404775148986899989997
Q ss_pred ECCCCEEEEECCC
Q ss_conf 8899099998899
Q 000744 1262 TKCGTIEVWLKER 1274 (1306)
Q Consensus 1262 s~Dg~I~IWd~~t 1274 (1306)
+.||+|++|++..
T Consensus 681 s~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 681 YTDGVIRVWGIGR 693 (694)
T ss_dssp ETTSEEEEEEC--
T ss_pred CCCCEEEEEECCC
T ss_conf 5898499985357
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=280.99 Aligned_cols=265 Identities=13% Similarity=0.154 Sum_probs=198.9
Q ss_pred CCCCCCCCCCCCCCCCC---------CEEEEEECCCCEEEEECCCC----EEECCCCCCCEEEEEEECC--EEEEEECCC
Q ss_conf 02312322222323452---------19999817990999939974----5872668987899999599--999998899
Q 000744 992 GTLRKLKKYSAVVTDIQ---------KALMNLSSVNATELWHCNEV----TELDSSTNGEVLSLIHLKG--RVLSSHSDG 1056 (1306)
Q Consensus 992 ~~l~~l~ghs~~V~~i~---------~~Lasgs~Dg~I~IWd~~~~----~~i~~~H~~~V~sI~fspd--~LaSgs~Dg 1056 (1306)
...+.+++|.+.|+++. .+|++|+.|++|++|+.... .....+|...|.++.|+++ .+++++.|+
T Consensus 23 ~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~ 102 (321)
T 3ow8_A 23 ILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDA 102 (321)
T ss_dssp EEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred HEEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCC
T ss_conf 04552156889679999824888888889998499989998898997436660056778889999889999899993798
Q ss_pred CEEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEE
Q ss_conf 29999588885111789803586689999968999999995899399997689953699831478884799727927999
Q 000744 1057 TIKMWDSGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHELTANAEIACF 1136 (1306)
Q Consensus 1057 ~I~IWd~~t~~~~~i~~l~~H~~~V~si~fspdg~~L~Sgs~DgtI~IWdi~~~~~~~i~~~~~~~~V~si~~~~~~i~~ 1136 (1306)
+|++||+.++ +++..+..|...+.+++|+|+++++++|+.||.|++|++.+++. ......+...+.++. +
T Consensus 103 ~i~lWd~~~~--~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~-~~~~~~~~~~v~~~~-------~ 172 (321)
T 3ow8_A 103 HIRLWDLENG--KQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK-EYSLDTRGKFILSIA-------Y 172 (321)
T ss_dssp EEEEEETTTT--EEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSE-EEEEECSSSCEEEEE-------E
T ss_pred CEEEEECCCC--CEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCE-EEEECCCCCEEEEEE-------E
T ss_conf 0999978999--79899937985679999999999899983899199998679946-677438994299999-------9
Q ss_pred ECCCCEEEEEEECCCEEEECCCCCEEEEEEECCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCC-CEEEEEEECCC
Q ss_conf 82999499998259789842699868999919999999789819999899992468831732212886-57999993896
Q 000744 1137 VSPATGVKVYNWSGAIKHINFNKHVKSLVMTGDKLYCGCSGYSIQEVDLGNLTSTTFYAGTKKLLGKQ-TIHSLHMHNGL 1215 (1306)
Q Consensus 1137 s~dg~~I~i~~~~~~~~l~~~~~~V~si~~s~~~L~sgs~Dg~I~iwDl~~~~~~~~~~~~~~l~gh~-~I~si~~s~~~ 1215 (1306)
+++|+ ++++|+.|+.|++||+++++.+..+. +|. +|+++.|+|++
T Consensus 173 spdg~----------------------------~lasg~~dg~i~iwd~~~~~~~~~~~------~h~~~v~~l~~spd~ 218 (321)
T 3ow8_A 173 SPDGK----------------------------YLASGAIDGIINIFDIATGKLLHTLE------GHAMPIRSLTFSPDS 218 (321)
T ss_dssp CTTSS----------------------------EEEEEETTSCEEEEETTTTEEEEEEC------CCSSCCCEEEECTTS
T ss_pred CCCCC----------------------------EEEEECCCCEEEEEECCCCCEEEEEC------CCCCCEEEEEECCCC
T ss_conf 89999----------------------------99999289839999999990999980------258960189994899
Q ss_pred EEEEEEECCCCEEEEEECCCCCEEEEEEC-CCCEEEEEECCC--EEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCC
Q ss_conf 89999954998799997899935899806-997899999286--999998899099998899908899964668888877
Q 000744 1216 LFAGGSSVDGTAGKVFSISSKTAVGSFTT-GIDIQHLAVNSD--FIFTATKCGTIEVWLKERVTRVASVKANNSGGGHAK 1292 (1306)
Q Consensus 1216 ~li~s~s~Dg~~I~IWD~~s~~~i~~l~~-~~~V~sia~spd--~Lasgs~Dg~I~IWd~~tg~~i~~l~~~~~~~~~~~ 1292 (1306)
.++++++.|+ .|++||++++.....+.+ ...|++++|+|+ ++++++.|++|++||+.+++++.++.. |...
T Consensus 219 ~~l~s~s~dg-~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-----h~~~ 292 (321)
T 3ow8_A 219 QLLVTASDDG-YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD-----HQDQ 292 (321)
T ss_dssp CEEEEECTTS-CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-----CSSC
T ss_pred CEEEEECCCC-EEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECC-----CCCC
T ss_conf 9899990998-099987899632589868888268999979999899981898099994999888889837-----8773
Q ss_pred EEEEEECCCCCCCC
Q ss_conf 58999918999238
Q 000744 1293 ITCLGTGVDGHPYK 1306 (1306)
Q Consensus 1293 V~siafSpdg~~La 1306 (1306)
|++++|+|+|++|+
T Consensus 293 v~~v~~s~~g~~l~ 306 (321)
T 3ow8_A 293 VWGVKYNGNGSKIV 306 (321)
T ss_dssp EEEEEECTTSSEEE
T ss_pred EEEEEECCCCCEEE
T ss_conf 89999989999999
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=1.00 E-value=1 Score=278.69 Aligned_cols=264 Identities=15% Similarity=0.230 Sum_probs=217.0
Q ss_pred CCCCCCCCCCCCCCCCC-----CEEEEEECCCCEEEEECCCC--EEECCCCCCCEEEEEEECC--EEEEEECCCCEEEEE
Q ss_conf 02312322222323452-----19999817990999939974--5872668987899999599--999998899299995
Q 000744 992 GTLRKLKKYSAVVTDIQ-----KALMNLSSVNATELWHCNEV--TELDSSTNGEVLSLIHLKG--RVLSSHSDGTIKMWD 1062 (1306)
Q Consensus 992 ~~l~~l~ghs~~V~~i~-----~~Lasgs~Dg~I~IWd~~~~--~~i~~~H~~~V~sI~fspd--~LaSgs~Dg~I~IWd 1062 (1306)
+..++|++|.+.|.++. ++|++|+.||+|++||..+. ......|..+|.++.|+++ +|++|+.|++|++||
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred EEEEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCEEEEEE
T ss_conf 46770107888568999899998799982799699987888826677605677488999968999899988999799999
Q ss_pred CCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEECC-CC
Q ss_conf 88885111789803586689999968999999995899399997689953699831478884799727927999829-99
Q 000744 1063 SGKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHELTANAEIACFVSP-AT 1141 (1306)
Q Consensus 1063 ~~t~~~~~i~~l~~H~~~V~si~fspdg~~L~Sgs~DgtI~IWdi~~~~~~~i~~~~~~~~V~si~~~~~~i~~s~d-g~ 1141 (1306)
+.++ +++..+.+|.+.|++++|+|+++++++|+.|++|++||++++.........|...|.++. ++|+ +.
T Consensus 84 ~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~-------~~p~~~~ 154 (304)
T 2ynn_A 84 YNTG--EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVA-------FNPKDPS 154 (304)
T ss_dssp TTTC--CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEE-------ECTTCTT
T ss_pred CCCC--CEEEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCCHHHHHCCCCCCEEEEE-------ECCCCCC
T ss_conf 9999--678998079980899999599999999879981999989999223101056689579999-------8889999
Q ss_pred EEEEEEECCCEEEECCCCCEEEEEEECCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCC-CEEEEEEE--CCCEEE
Q ss_conf 499998259789842699868999919999999789819999899992468831732212886-57999993--896899
Q 000744 1142 GVKVYNWSGAIKHINFNKHVKSLVMTGDKLYCGCSGYSIQEVDLGNLTSTTFYAGTKKLLGKQ-TIHSLHMH--NGLLFA 1218 (1306)
Q Consensus 1142 ~I~i~~~~~~~~l~~~~~~V~si~~s~~~L~sgs~Dg~I~iwDl~~~~~~~~~~~~~~l~gh~-~I~si~~s--~~~~li 1218 (1306)
.+++|+.|+.|++||+++......+. .+|. .+..+.|. +++.++
T Consensus 155 ----------------------------~l~sgs~D~~v~iwd~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~l 201 (304)
T 2ynn_A 155 ----------------------------TFASGCLDRTVKVWSLGQSTPNFTLT-----TGQERGVNYVDYYPLPDKPYM 201 (304)
T ss_dssp ----------------------------EEEEEETTSEEEEEETTCSSCSEEEE-----CCCTTCEEEEEECCSTTCCEE
T ss_pred ----------------------------EEEEEECCCEEEEEECCCCCCCCEEC-----CCCCCCEEEEEEEECCCCCEE
T ss_conf ----------------------------89999189839999899997663321-----687475778999986999999
Q ss_pred EEEECCCCEEEEEECCCCCEEEEEEC-CCCEEEEEECCC--EEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCEEE
Q ss_conf 99954998799997899935899806-997899999286--999998899099998899908899964668888877589
Q 000744 1219 GGSSVDGTAGKVFSISSKTAVGSFTT-GIDIQHLAVNSD--FIFTATKCGTIEVWLKERVTRVASVKANNSGGGHAKITC 1295 (1306)
Q Consensus 1219 ~s~s~Dg~~I~IWD~~s~~~i~~l~~-~~~V~sia~spd--~Lasgs~Dg~I~IWd~~tg~~i~~l~~~~~~~~~~~V~s 1295 (1306)
++++.|+ +|++||+++++++.++.+ ...|.+++|+|+ ++++|+.||+|++||..++++.+++.. |...+++
T Consensus 202 ~s~s~D~-~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~-----~~~~~~~ 275 (304)
T 2ynn_A 202 ITASDDL-TIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV-----GLERSWC 275 (304)
T ss_dssp EEEETTS-EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC-----SSSSEEE
T ss_pred EEECCCC-EEEEEECCCCCCCEEECCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEECCC-----CCCCEEE
T ss_conf 9986999-199996789860246479888889999889999899993899599998998714564468-----9860899
Q ss_pred EEECCCCC
Q ss_conf 99918999
Q 000744 1296 LGTGVDGH 1303 (1306)
Q Consensus 1296 iafSpdg~ 1303 (1306)
++|+|++.
T Consensus 276 ~~~~~~~~ 283 (304)
T 2ynn_A 276 IATHPTGR 283 (304)
T ss_dssp EEECTTCG
T ss_pred EEECCCCC
T ss_conf 99878998
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=1.00 E-value=1 Score=274.80 Aligned_cols=265 Identities=15% Similarity=0.240 Sum_probs=191.4
Q ss_pred CCCCCCCCCCCCCCCCC-----CEEEEEECCCCEEEEECCCC--EEECCCCCCCEEEEEEECC--EEEEEECCCCEEEEE
Q ss_conf 02312322222323452-----19999817990999939974--5872668987899999599--999998899299995
Q 000744 992 GTLRKLKKYSAVVTDIQ-----KALMNLSSVNATELWHCNEV--TELDSSTNGEVLSLIHLKG--RVLSSHSDGTIKMWD 1062 (1306)
Q Consensus 992 ~~l~~l~ghs~~V~~i~-----~~Lasgs~Dg~I~IWd~~~~--~~i~~~H~~~V~sI~fspd--~LaSgs~Dg~I~IWd 1062 (1306)
+..+++++|.+.|.++. ++|++|+.||+|++||..+. ......|...|.+++|+|+ ++++|+.|+.|++|+
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred HHHEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEE
T ss_conf 11001048778368999889999999981889689998999874337603886188999999999999980898199997
Q ss_pred CCCCC--CCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEE-CCCCCEEEEEECCCEEEEECC
Q ss_conf 88885--111789803586689999968999999995899399997689953699831-478884799727927999829
Q 000744 1063 SGKRV--LRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEEIHCLQVH-NVKEAVHELTANAEIACFVSP 1139 (1306)
Q Consensus 1063 ~~t~~--~~~i~~l~~H~~~V~si~fspdg~~L~Sgs~DgtI~IWdi~~~~~~~i~~~-~~~~~V~si~~~~~~i~~s~d 1139 (1306)
+.++. ......+.+|.+.|.++.|++++ .+++++.|++|++||+.++ .++..+ .|...|.++. ++++
T Consensus 126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~--~~~~~~~~h~~~v~~~~-------~~~~ 195 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETG--QQTTTFTGHTGDVMSLS-------LAPD 195 (340)
T ss_dssp TTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEE-------ECTT
T ss_pred CCCCCCCCEEEEEECCCCCCEEEEEECCCC-CEEEEECCCCEEEEECCCC--CEEEEECCCCCCEEEEE-------ECCC
T ss_conf 966888613677844877638999987999-6999989992999989999--18899769998668999-------9899
Q ss_pred CCEEEEEEECCCEEEECCCCCEEEEEEECCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCC-CEEEEEEECCCEEE
Q ss_conf 99499998259789842699868999919999999789819999899992468831732212886-57999993896899
Q 000744 1140 ATGVKVYNWSGAIKHINFNKHVKSLVMTGDKLYCGCSGYSIQEVDLGNLTSTTFYAGTKKLLGKQ-TIHSLHMHNGLLFA 1218 (1306)
Q Consensus 1140 g~~I~i~~~~~~~~l~~~~~~V~si~~s~~~L~sgs~Dg~I~iwDl~~~~~~~~~~~~~~l~gh~-~I~si~~s~~~~li 1218 (1306)
+. .+++|+.|+.|++||++++.....+. +|. .|++++|+|++.++
T Consensus 196 ~~----------------------------~l~sg~~d~~v~~wd~~~~~~~~~~~------~h~~~v~~v~~~p~~~~l 241 (340)
T 1got_B 196 TR----------------------------LFVSGACDASAKLWDVREGMCRQTFT------GHESDINAICFFPNGNAF 241 (340)
T ss_dssp SS----------------------------EEEEEETTSCEEEEETTTCSEEEEEC------CCSSCEEEEEECTTSSEE
T ss_pred CC----------------------------EEEEEECCCCEEEEECCCCEEEEEEC------CCCCCEEEEEECCCCCEE
T ss_conf 99----------------------------99999389939997789981678974------876877999994999989
Q ss_pred EEEECCCCEEEEEECCCCCEEEEEECC---CCEEEEEECCC--EEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCE
Q ss_conf 999549987999978999358998069---97899999286--9999988990999988999088999646688888775
Q 000744 1219 GGSSVDGTAGKVFSISSKTAVGSFTTG---IDIQHLAVNSD--FIFTATKCGTIEVWLKERVTRVASVKANNSGGGHAKI 1293 (1306)
Q Consensus 1219 ~s~s~Dg~~I~IWD~~s~~~i~~l~~~---~~V~sia~spd--~Lasgs~Dg~I~IWd~~tg~~i~~l~~~~~~~~~~~V 1293 (1306)
++++.|+ +|++||+++++.+..+.+. ..|++++|+|+ ++++|+.||.|++||..+++.+..+.+ |...|
T Consensus 242 ~s~s~d~-~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~-----h~~~v 315 (340)
T 1got_B 242 ATGSDDA-TCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG-----HDNRV 315 (340)
T ss_dssp EEEETTS-CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-----CSSCE
T ss_pred EEECCCC-CEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEEC-----CCCCE
T ss_conf 9974898-19999889991899972688524169999989999999977999099988413838658505-----77848
Q ss_pred EEEEECCCCCCCC
Q ss_conf 8999918999238
Q 000744 1294 TCLGTGVDGHPYK 1306 (1306)
Q Consensus 1294 ~siafSpdg~~La 1306 (1306)
++++|+|||++|+
T Consensus 316 ~~~~~s~dg~~l~ 328 (340)
T 1got_B 316 SCLGVTDDGMAVA 328 (340)
T ss_dssp EEEEECTTSSCEE
T ss_pred EEEEECCCCCEEE
T ss_conf 8999829999899
No 8
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=273.32 Aligned_cols=295 Identities=16% Similarity=0.257 Sum_probs=241.8
Q ss_pred CCCCCCCCCCCCCCCCC-----CEEEEEECCCCEEEEECCC-CEEECCCCCCCEEEEEEECC--EEEEEECCCCEEEEEC
Q ss_conf 02312322222323452-----1999981799099993997-45872668987899999599--9999988992999958
Q 000744 992 GTLRKLKKYSAVVTDIQ-----KALMNLSSVNATELWHCNE-VTELDSSTNGEVLSLIHLKG--RVLSSHSDGTIKMWDS 1063 (1306)
Q Consensus 992 ~~l~~l~ghs~~V~~i~-----~~Lasgs~Dg~I~IWd~~~-~~~i~~~H~~~V~sI~fspd--~LaSgs~Dg~I~IWd~ 1063 (1306)
+.+..+.+|...+.++. +.+++++.|+.|++|+... ......+|...|++++|+|+ .+++++.||+|++||.
T Consensus 253 ~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~ 332 (577)
T 2ymu_A 253 QLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 332 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEEC
T ss_conf 79999806889879999968999999995999799994899589997068897699999999999999969995999969
Q ss_pred CCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEEEEE--CCCEEEEECCCC
Q ss_conf 888511178980358668999996899999999589939999768995369983147888479972--792799982999
Q 000744 1064 GKRVLRLIQEVREHTRAVTCLYVPSSGDKLYSGSLDKTIRVWSIKPEEIHCLQVHNVKEAVHELTA--NAEIACFVSPAT 1141 (1306)
Q Consensus 1064 ~t~~~~~i~~l~~H~~~V~si~fspdg~~L~Sgs~DgtI~IWdi~~~~~~~i~~~~~~~~V~si~~--~~~~i~~s~dg~ 1141 (1306)
.+. .+..+.+|...|++++|+|+++++++|+.|+.|++|+........ ...|...|.++.| ++..+.....+.
T Consensus 333 ~~~---~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~--~~~~~~~v~~~~~s~dg~~l~~~~~d~ 407 (577)
T 2ymu_A 333 NGQ---HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQT--LTGHSSSVRGVAFSPDGQTIASASDDK 407 (577)
T ss_dssp TSC---EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEE--EECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred CCC---EEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCEEEE--ECCCCCCEEEEEECCCCCEEEEEECCC
T ss_conf 997---257874788977999998999999999699989999089978998--527889748999989999999994999
Q ss_pred EEEEEEECCCE--EEECCCCCEEEEEEECC--EEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCC-CEEEEEEECCCE
Q ss_conf 49999825978--98426998689999199--99999789819999899992468831732212886-579999938968
Q 000744 1142 GVKVYNWSGAI--KHINFNKHVKSLVMTGD--KLYCGCSGYSIQEVDLGNLTSTTFYAGTKKLLGKQ-TIHSLHMHNGLL 1216 (1306)
Q Consensus 1142 ~I~i~~~~~~~--~l~~~~~~V~si~~s~~--~L~sgs~Dg~I~iwDl~~~~~~~~~~~~~~l~gh~-~I~si~~s~~~~ 1216 (1306)
.+.+|+.++.. .+..|...|++++|+|+ .+++++.|+.|++||.. ++.... +.+|. .|++++|+|++.
T Consensus 408 ~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~------~~~~~~~v~~~~~spd~~ 480 (577)
T 2ymu_A 408 TVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQT------LTGHSSSVRGVAFSPDGQ 480 (577)
T ss_dssp EEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEE------EECCSSCEEEEEECTTSC
T ss_pred EEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCEEEEEECC-CCEEEE------ECCCCCCEEEEEECCCCC
T ss_conf 8999969997898962889975799998999999999399989999799-988999------727899778999969999
Q ss_pred EEEEEECCCCEEEEEECCCCCEEEEEEC-CCCEEEEEECCC--EEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCE
Q ss_conf 9999954998799997899935899806-997899999286--9999988990999988999088999646688888775
Q 000744 1217 FAGGSSVDGTAGKVFSISSKTAVGSFTT-GIDIQHLAVNSD--FIFTATKCGTIEVWLKERVTRVASVKANNSGGGHAKI 1293 (1306)
Q Consensus 1217 li~s~s~Dg~~I~IWD~~s~~~i~~l~~-~~~V~sia~spd--~Lasgs~Dg~I~IWd~~tg~~i~~l~~~~~~~~~~~V 1293 (1306)
++++++.|+ .|++||. +++++..+.+ ...|++++|+|+ +|++++.||.|++||. +++++.++.+ |...|
T Consensus 481 ~las~~~d~-~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~-----h~~~v 552 (577)
T 2ymu_A 481 TIASASDDK-TVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-----HSSSV 552 (577)
T ss_dssp EEEEEETTS-EEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEEC-----CSSCE
T ss_pred EEEEEECCC-EEEEECC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEEC-CCCEEEEECC-----CCCCE
T ss_conf 999991989-7999939-99789998679999899999189999999989699999969-9978989718-----88887
Q ss_pred EEEEECCCCCCCC
Q ss_conf 8999918999238
Q 000744 1294 TCLGTGVDGHPYK 1306 (1306)
Q Consensus 1294 ~siafSpdg~~La 1306 (1306)
++++|+|||++|+
T Consensus 553 ~~~~fs~dg~~l~ 565 (577)
T 2ymu_A 553 WGVAFSPDGQTIA 565 (577)
T ss_dssp EEEEECTTSSCEE
T ss_pred EEEEECCCCCEEE
T ss_conf 8999968999999
No 9
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=271.42 Aligned_cols=101 Identities=15% Similarity=0.140 Sum_probs=48.6
Q ss_pred CEEEEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEEEC-CCCEEEEEECCC--EEEEEECCCCEEEEECCCCEEEEEE
Q ss_conf 5799999389689999954998799997899935899806-997899999286--9999988990999988999088999
Q 000744 1205 TIHSLHMHNGLLFAGGSSVDGTAGKVFSISSKTAVGSFTT-GIDIQHLAVNSD--FIFTATKCGTIEVWLKERVTRVASV 1281 (1306)
Q Consensus 1205 ~I~si~~s~~~~li~s~s~Dg~~I~IWD~~s~~~i~~l~~-~~~V~sia~spd--~Lasgs~Dg~I~IWd~~tg~~i~~l 1281 (1306)
.|.++.|++++.++++++.|+ +|++||+.++.++..+.+ ...|++++|+|+ ++++|+.||.|++|++.+++.+..+
T Consensus 1087 ~v~~~~~s~d~~~l~s~s~d~-~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~ 1165 (1249)
T 3sfz_A 1087 TVLSCAISSDATKFSSTSADK-TAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSC 1165 (1249)
T ss_dssp CCCCEEECSSSSSCEEECCSS-CCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCC
T ss_pred CEEEEEECCCCCEEEEECCCC-CEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEE
T ss_conf 489999989999899984999-4899878985001255068776799999799998999828997999988999457885
Q ss_pred ECCC----CCCCCCCEEEEEECCCCCCCC
Q ss_conf 6466----888887758999918999238
Q 000744 1282 KANN----SGGGHAKITCLGTGVDGHPYK 1306 (1306)
Q Consensus 1282 ~~~~----~~~~~~~V~siafSpdg~~La 1306 (1306)
.... ...|...|++++|+|||++|+
T Consensus 1166 ~~~~~~~~~~~~~~~v~~l~fs~dg~~l~ 1194 (1249)
T 3sfz_A 1166 APISVEEGTATHGGWVTDVCFSPDSKTLV 1194 (1249)
T ss_dssp CCCC-------CCSCCCEEEECTTSSCEE
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCEEE
T ss_conf 14444421025674289999978999899
No 10
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=270.51 Aligned_cols=98 Identities=12% Similarity=0.116 Sum_probs=43.6
Q ss_pred CCC-CEEEEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEEECCC-EEEEEECCCCEEEEECCCCEEEE
Q ss_conf 886-5799999389689999954998799997899935899806997899999286-99999889909999889990889
Q 000744 1202 GKQ-TIHSLHMHNGLLFAGGSSVDGTAGKVFSISSKTAVGSFTTGIDIQHLAVNSD-FIFTATKCGTIEVWLKERVTRVA 1279 (1306)
Q Consensus 1202 gh~-~I~si~~s~~~~li~s~s~Dg~~I~IWD~~s~~~i~~l~~~~~V~sia~spd-~Lasgs~Dg~I~IWd~~tg~~i~ 1279 (1306)
+|. .|+++.|++++.++++++.|+ .|++||+.++.......+...|.++.|+++ .+++++.||.|++||+.+++...
T Consensus 1001 ~h~~~v~~l~~s~dg~~l~s~~~dg-~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~ 1079 (1249)
T 3sfz_A 1001 GHKKAVRHIQFTADGKTLISSSEDS-VIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIER 1079 (1249)
T ss_dssp CCSSCCCCEEECSSSSCEEEECSSS-BEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCC-EEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCCEEE
T ss_conf 6777168999989999899986998-799998799966898527873899999089958999788968998889886558
Q ss_pred EEECCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 99646688888775899991899923
Q 000744 1280 SVKANNSGGGHAKITCLGTGVDGHPY 1305 (1306)
Q Consensus 1280 ~l~~~~~~~~~~~V~siafSpdg~~L 1305 (1306)
.+.+ |...|++++|+|||+++
T Consensus 1080 ~~~~-----~~~~v~~~~~s~d~~~l 1100 (1249)
T 3sfz_A 1080 DFTC-----HQGTVLSCAISSDATKF 1100 (1249)
T ss_dssp EEEC-----CSSCCCCEEECSSSSSC
T ss_pred EECC-----CCCCEEEEEECCCCCEE
T ss_conf 8746-----68848999998999989
Done!