Query 000746
Match_columns 1303
No_of_seqs 498 out of 6050
Neff 8.1
Searched_HMMs 29240
Date Tue Mar 26 17:27:52 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000746.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_516-520//hhsearch_pdb/000746hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1095.1 91.4 1024 273-1302 2-1137(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 882.4 81.4 962 325-1302 46-1091(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 553.5 50.2 511 328-839 753-1315(1321)
4 3qf4_B Uncharacterized ABC tra 1.0 1 1 548.0 55.5 516 323-839 33-589 (598)
5 4a82_A Cystic fibrosis transme 1.0 1 1 547.6 58.0 518 320-838 7-574 (578)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 537.1 62.4 520 319-839 15-577 (587)
7 3b60_A Lipid A export ATP-bind 1.0 1 1 521.3 65.1 518 321-839 19-578 (582)
8 3b5x_A Lipid A export ATP-bind 1.0 1 1 520.8 70.5 518 321-839 19-578 (582)
9 2yl4_A ATP-binding cassette SU 1.0 1 1 509.6 61.8 517 321-838 13-581 (595)
10 3g5u_A MCG1178, multidrug resi 1.0 1 1 475.1 52.4 511 328-840 706-1270(1284)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1095.07 Aligned_cols=1024 Identities=16% Similarity=0.170 Sum_probs=725.0
Q ss_pred HHHHH-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC---------------CCCHHHHHHHHH---H-HHHHHHH
Q ss_conf 99460-59888899989996371999999999998984205---------------880289999999---8-6899999
Q 000746 273 LQLGY-KKPITEKDVWKLDTWDQTEILIEKFHRCWIEESQR---------------SKPWLLRALNNS---F-GGRFWLG 332 (1303)
Q Consensus 273 ~~~g~-~~~L~~~dl~~l~~~~~s~~l~~~~~~~w~~~~~~---------------~~~~l~~~l~~~---~-~~~~~~~ 332 (1303)
++.|. |++|+..|.+.+.|+|..+...+..++.|.+...+ ++.+ ++.+++. + +.-++.+
T Consensus 2 ~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~Lfrya~~~d~~l~~~g 80 (1321)
T 4f4c_A 2 LRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVS-IPQLYRYTTTLEKLLLFIG 80 (1321)
T ss_dssp --CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCC-HHHHTTTCCHHHHHHHHHH
T ss_pred CCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC-HHHHHHCCCHHHHHHHHHH
T ss_conf 877310068763544567950111000011345424355433431001223202568779-9997315676789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCC--------C-------C-CHHH----HHHHHHHHHHHHHHH-HHHHHHHHHH
Q ss_conf 9999999999999999999999984069--------9-------6-3489----999999999999999-9999999999
Q 000746 333 GLFKIGNDLSQFVGPVLLNHLLQSMQRG--------D-------P-AWIG----YIYAFLIFVGVSFGV-LTEAQYFQNV 391 (1303)
Q Consensus 333 ~~~~l~~~~~~~~~p~ll~~li~~~~~~--------~-------~-~~~~----~~~a~~l~~~~~~~~-~~~~~~~~~~ 391 (1303)
.+..++..+.....+++++++++.+.+. . . .... ....++.+++..+.. ++.....+..
T Consensus 81 ~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~ 160 (1321)
T 4f4c_A 81 TLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTCY 160 (1321)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999997010001454300034431001689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999997499110169996899999999999999999-99999998999999999999999979999
Q 000746 392 WRVGFRLRSTLVAAIFRKTLRLTHEARKGFPSGKVTNMITTDANALQQIS-QQLHGLWSAPFRITLSMVLLYQQLGVASL 470 (1303)
Q Consensus 392 ~r~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~pl~i~~~~~ll~~~lg~~~l 470 (1303)
..++.|+-..++..+|+|.++++....++.++|+++|++++|++++++++ ..+..++..++.++.++.+++..-+..++
T Consensus 161 ~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~~~~~l~l 240 (1321)
T 4f4c_A 161 LYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSWQLTL 240 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999997889899879984899999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999964899998224899999999999999999999999999
Q 000746 471 LGSLMLVLMVPLQTFIISKMRKLTKEGLQWTDRRVSLTNEILAAMDTVKCYAWEKSFQSRVQSIRDDELSWFRKAQFLSA 550 (1303)
Q Consensus 471 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~r~~E~~~~~~~~~~~~ 550 (1303)
+.++++.+...+..++.++..+.+++.++..+++.+.++|.++|||+||+|+||+.+.+++.+..++..+...+......
T Consensus 241 v~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1321)
T 4f4c_A 241 VMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKGLFLG 320 (1321)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999983999998214299999999999999999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999988968--8677653565460798898899999999999999999999999999999999999999999886211
Q 000746 551 FNSFILNSIPV--VVTVVSFGTFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNLLSQVVNANVSLQRLEELLLAEERIL 628 (1303)
Q Consensus 551 ~~~~~~~~~~~--~~~~~~f~~~~~~~~~l~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~~~~s~~Ri~~fL~~~~~~~ 628 (1303)
+.......... .+.++.+|.+.+.++.++++.+++.+.++..+..|+..++..+..+.++.+|++||.++++.++..+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 400 (1321)
T 4f4c_A 321 ISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDRKPVID 400 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999999599869999999999999999999899999999999999999999971785345
Q ss_pred CCCC---CCCCCCCCEEEEEEEEEECC--CCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEECC
Q ss_conf 9999---99999992899933897289--998530056572499699999499998678999984699999996699949
Q 000746 629 MPNP---PLEPELPAVSIKNGNFSWDS--KSPTLSNINLDIPVGSLVAIVGGTGEGKTSLVSAMLGELPPLKDASVVIRG 703 (1303)
Q Consensus 629 ~~~~---~~~~~~~~i~~~~~~f~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llge~~~~~g~~~~~~~ 703 (1303)
.... ...+....|+++|++|+|+. +.++|+|+||++++|++++|+||+|||||||+++|+|+++|.+| .+.++|
T Consensus 401 ~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~~~~~~G-~I~idG 479 (1321)
T 4f4c_A 401 SSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKG-KITIDG 479 (1321)
T ss_dssp CSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTSSCCSEE-EEEETT
T ss_pred CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCC-CCCCCC
T ss_conf 6665565677888767999855407999987433331886228827899805898577888875456516448-615799
Q ss_pred -------------EEEEECCCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
Q ss_conf -------------1799816865666558899704999-99565899998982388851099999731148988776689
Q 000746 704 -------------TVAYVPQISWIFNATLRKNILFGSE-FDPAKYWKTVDVSALQHDLDLLPDRDLTEIGERGVNISGGQ 769 (1303)
Q Consensus 704 -------------~iayv~Q~pwl~~~TireNI~~g~~-~d~~~y~~vi~ac~L~~di~~lp~gd~T~ige~G~~LSGGQ 769 (1303)
+|+||+|+||+|++||||||+||++ .+++++.++++.|++++|++.||+||+|.|||+|.+|||||
T Consensus 480 ~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~vGe~G~~LSGGQ 559 (1321)
T 4f4c_A 480 VDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVGDRGTQLSGGQ 559 (1321)
T ss_dssp EETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSEESSSSCCCCHHH
T ss_pred CCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCCHHH
T ss_conf 65011259998504666587533207861678864155220999999998756546887088888607558988777778
Q ss_pred HHHHHHHHHH-----------------------HHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHH
Q ss_conf 9999999999-----------------------98998675099879999249994001497999939879994397889
Q 000746 770 KQRVSMARAV-----------------------FNSCIKEELRGKTRILVTNQLHFLPHVDRIILVSEGMIKEEGSFEEL 826 (1303)
Q Consensus 770 kqRiaLARAi-----------------------~~~~i~~~l~~~TvilvTH~~~~l~~aD~ii~l~~G~i~~~G~~~~l 826 (1303)
||||+||||+ +++++.+.++++|+|+|||+++.++.||+|++|++|+|+|+|+|+||
T Consensus 560 kQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrls~i~~aD~Iivl~~G~ive~Gth~eL 639 (1321)
T 4f4c_A 560 KQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNGQVVEVGDHRAL 639 (1321)
T ss_dssp HHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCTTTTTTCSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCEEEEEECCEEECCCCHHHH
T ss_conf 79999999872599989984554468878999999999998479889997363878986898999639965136899999
Q ss_pred HHCCHHHHHHHHHHCCCHHHHHHHHCC--CCCCCCCCC------CCCCCC--C---CCCCCC---CCCCCC-CCCCCCCC
Q ss_conf 733459999999704311333321001--344666556------732212--1---122468---888742-11114677
Q 000746 827 SKHGRLFQKLMENAGKMEEMEEREEKD--DSINSNQEV------SKPVAN--R---AVQVNE---FPKNES-YTKKGKRG 889 (1303)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~--~---~~~~~~---~~~~~~-~~~~~~~~ 889 (1303)
++.++.|+++.......+..+...+.. .+....... ...... . ...... ...... .......+
T Consensus 640 ~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 719 (1321)
T 4f4c_A 640 MAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSITNGPVIDEKEERIG 719 (1321)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHHHCC--------------------------------------------------CCCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHCC
T ss_conf 98532799999962212222332334433223211122222342222222110221110132124567740257775315
Q ss_pred C--CCCCHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----CCCCCCCHHHHHH
Q ss_conf 7--654013356627512467999999808437999999999999999862448774300246----6788892388999
Q 000746 890 R--SVLVKQEERETGIVSGSVLTRYKNALGGPWVIMILFACYLSTEVLRISSSTWLSFWTDQS----TSKNYNPGFYIAI 963 (1303)
Q Consensus 890 ~--~~~~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~----~~~~~~~~~~l~i 963 (1303)
. .....++.++.|..++.+++.|....+.++.+.+.+.+..+.........+|+..|.+.. ........+|.++
T Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1321)
T 4f4c_A 720 KDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQGHFWALM 799 (1321)
T ss_dssp CCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 40389999999970786310999999987789999999999999999999999999999987517934556678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999999999877396434334--781025787513377877878999999999
Q 000746 964 YTILAFGQVTVTLLNSYWLIISSLRAAKRLHDSMLNSILRAPMLFFHT--NPIGRVINRFSRDLGDIDRNVASFVNMFMN 1041 (1303)
Q Consensus 964 y~~l~~~~~~~~~~~~~~~~~~~~~~s~~Lh~~l~~~il~~p~~fFd~--~~~G~ilnRfs~D~~~id~~l~~~~~~~~~ 1041 (1303)
|++++++..++.++..+++...+.++++++|++++++++++|++|||+ +|+|+++|||++|++.+|..++..+..++.
T Consensus 800 ~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~ 879 (1321)
T 4f4c_A 800 FLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVIT 879 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999998887349933321678884888850250599999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCHHHHHH
Q ss_conf 99999999999999998999999999999999999999877999977500234289889997628065750471789999
Q 000746 1042 QLWQLLSTFVLIGIVSTISLWAIMPLLILFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAFKAYDRMAK 1121 (1303)
Q Consensus 1042 ~~~~~i~~~v~i~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIRAf~~e~~~~~ 1121 (1303)
.++.+++.++++.+.+|.++++++++++++++...++.+..++......+..++...++.|+++|+++||+|++|+++.+
T Consensus 880 ~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~ 959 (1321)
T 4f4c_A 880 TLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYE 959 (1321)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHHHHH
T ss_pred HHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 86537777022137868999999998889999999999999999999999988898899999962798886141488999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998886658999999987999999999999999999999987067444434305699999999999999999999999
Q 000746 1122 INGKSMDNNIRFTLANTSSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQA 1201 (1303)
Q Consensus 1122 ~~~~~~d~~~~~~~~~~~~~~wl~~~l~ll~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~l~~~l~~~v~~~ 1201 (1303)
++.+.++...+..+.....+.+.......+..+....+..++....... ......+.+...+.+......++..+.+.+
T Consensus 960 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1038 (1321)
T 4f4c_A 960 NFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITD-PPTMQPMRVLRVMYAITISTSTLGFATSYF 1038 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSS-SCSSCHHHHHHHHHHHHTTTSSTTGGGGHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999998757887537-654214789999999987788999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCC-CCCCCCCEEEECCCCEEEEECCCC
Q ss_conf 9996643499999971069999998887889999999964099997799837999-995335306666997899987999
Q 000746 1202 SRAENSLNAVERVGTYIDLPSEAPGMVESNRPPPAWPSSGSIKFEDVVLRYRPEL-PPVLHGLSFTVSPSEKVGIVGRTG 1280 (1303)
Q Consensus 1202 ~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~G~Ief~nVsf~Y~~~~-~~VLk~Isl~I~pGekVaIVGrTG 1280 (1303)
.++++.+.+++|+.++++.++|.+. ...+++.||..|+|+|+||+|+|+++. .|||||+||+|+||||||||||||
T Consensus 1039 ~~~~~~~~a~~ri~~~l~~~~~~~~---~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SG 1115 (1321)
T 4f4c_A 1039 PEYAKATFAGGIIFGMLRKISKIDS---LSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLALVGPSG 1115 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSSCT---TCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEEEECSTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCC---CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCC
T ss_conf 9999999999989998607665777---6677878888881899987985799998821245169988989999989999
Q ss_pred CCHHHHHHHHHHCCCCCCCEEE
Q ss_conf 8988999999402269997162
Q 000746 1281 AGKSSMLNALFRIVELERGENI 1302 (1303)
Q Consensus 1281 SGKSTLi~lL~Rl~e~~~G~I~ 1302 (1303)
||||||+++|+|+|||++|+|+
T Consensus 1116 sGKSTL~~lL~rl~~p~~G~I~ 1137 (1321)
T 4f4c_A 1116 CGKSTVVALLERFYDTLGGEIF 1137 (1321)
T ss_dssp SSTTSHHHHHTTSSCCSSSEEE
T ss_pred CHHHHHHHHHHCCCCCCCCEEE
T ss_conf 8199999999568638997899
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=882.42 Aligned_cols=962 Identities=17% Similarity=0.189 Sum_probs=635.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--------CC-----------HHH-HHHHHHHHHHHH-HHHHH
Q ss_conf 8689999999999999999999999999999840699--------63-----------489-999999999999-99999
Q 000746 325 FGGRFWLGGLFKIGNDLSQFVGPVLLNHLLQSMQRGD--------PA-----------WIG-YIYAFLIFVGVS-FGVLT 383 (1303)
Q Consensus 325 ~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~--------~~-----------~~~-~~~a~~l~~~~~-~~~~~ 383 (1303)
.++.++.+.+..++..+.....|++++.+++.+.... .. ... ..++ +++++.. ...++
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 124 (1284)
T 3g5u_A 46 DRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYA-YYYTGIGAGVLIV 124 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999998613444332222221111100244688999999-9999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999749911016999689999999999999999999-9999989999999999999
Q 000746 384 EAQYFQNVWRVGFRLRSTLVAAIFRKTLRLTHEARKGFPSGKVTNMITTDANALQQISQQ-LHGLWSAPFRITLSMVLLY 462 (1303)
Q Consensus 384 ~~~~~~~~~r~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~pl~i~~~~~ll~ 462 (1303)
.....+...+.+.++...++..+|+|.++++....++.++|+++|++++|++.+++.... +..+....+.++.++.++.
T Consensus 125 ~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 204 (1284)
T 3g5u_A 125 AYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGF 204 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999986998997568877899999988999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99979999999999999999999999999999999999999999999999648999982248999999999999999999
Q 000746 463 QQLGVASLLGSLMLVLMVPLQTFIISKMRKLTKEGLQWTDRRVSLTNEILAAMDTVKCYAWEKSFQSRVQSIRDDELSWF 542 (1303)
Q Consensus 463 ~~lg~~~l~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~r~~E~~~~ 542 (1303)
..-...+++.++++.++..+..++.+...+..++.++..++..+...|.++|+++||.|++|+.+.+++.+..++..+..
T Consensus 205 ~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~~~~~~~~~ 284 (1284)
T 3g5u_A 205 TRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRLG 284 (1284)
T ss_dssp HTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99899999999999999999999999999999999999999999999999787999984653999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999998896--886776535654607988988999999999999999999999999999999999999999
Q 000746 543 RKAQFLSAFNSFILNSIP--VVVTVVSFGTFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNLLSQVVNANVSLQRLEEL 620 (1303)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~--~~~~~~~f~~~~~~~~~l~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~~~~s~~Ri~~f 620 (1303)
.+..........+..... ..+.++.+|.+.+..+.++.+.+++.+.++.....|+..+...+..+.++..+.+|+.++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~ 364 (1284)
T 3g5u_A 285 IKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKI 364 (1284)
T ss_dssp HTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999992998899999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCC-CC--CCCCCCCCEEEEEEEEEECCC--CCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 9988621199-99--999999928999338972899--985300565724996999994999986789999846999999
Q 000746 621 LLAEERILMP-NP--PLEPELPAVSIKNGNFSWDSK--SPTLSNINLDIPVGSLVAIVGGTGEGKTSLVSAMLGELPPLK 695 (1303)
Q Consensus 621 L~~~~~~~~~-~~--~~~~~~~~i~~~~~~f~~~~~--~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llge~~~~~ 695 (1303)
++.++..+.. .. ...+....|+++|++|+|+.+ .++|+|+||++++|++++|+||+|||||||+++|+|+++|.+
T Consensus 365 l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl~~ll~g~~~~~~ 444 (1284)
T 3g5u_A 365 IDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLD 444 (1284)
T ss_dssp TSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHHHHHHTTTSSCCSE
T ss_pred HCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCC
T ss_conf 72898677666567777777771899998997699998710125458975998899989999979999999807889997
Q ss_pred CCEEEECC-------------EEEEECCCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 96699949-------------1799816865666558899704999-995658999989823888510999997311489
Q 000746 696 DASVVIRG-------------TVAYVPQISWIFNATLRKNILFGSE-FDPAKYWKTVDVSALQHDLDLLPDRDLTEIGER 761 (1303)
Q Consensus 696 g~~~~~~~-------------~iayv~Q~pwl~~~TireNI~~g~~-~d~~~y~~vi~ac~L~~di~~lp~gd~T~ige~ 761 (1303)
| .+.++| +++||+|+||+|++||+|||.+|.+ .++++++++++.|++.++++.+|+|++|.+||+
T Consensus 445 G-~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~ 523 (1284)
T 3g5u_A 445 G-MVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQFDTLVGER 523 (1284)
T ss_dssp E-EEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHSTTGGGCCCSSS
T ss_pred E-EEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
T ss_conf 3-899999987757999998654898688753776699997457989999999999998296999974656334501478
Q ss_pred CCCCCHHHHHHHHHHHHHHH-----------------------HHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEE
Q ss_conf 88776689999999999998-----------------------9986750998799992499940014979999398799
Q 000746 762 GVNISGGQKQRVSMARAVFN-----------------------SCIKEELRGKTRILVTNQLHFLPHVDRIILVSEGMIK 818 (1303)
Q Consensus 762 G~~LSGGQkqRiaLARAi~~-----------------------~~i~~~l~~~TvilvTH~~~~l~~aD~ii~l~~G~i~ 818 (1303)
|.+|||||||||+||||++. +.+....+++|+|+|||+++.+..||+|++|++|+++
T Consensus 524 g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~i~~~d~i~vl~~G~i~ 603 (1284)
T 3g5u_A 524 GAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIV 603 (1284)
T ss_dssp SCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHHHHTTCSEEEECSSSCCC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEE
T ss_conf 78659999999999999952999899979877779999999999999973999899994077899749989999899999
Q ss_pred EECCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 9439788973345999999970431133332100-134466655673221211224688887421111467776540133
Q 000746 819 EEGSFEELSKHGRLFQKLMENAGKMEEMEEREEK-DDSINSNQEVSKPVANRAVQVNEFPKNESYTKKGKRGRSVLVKQE 897 (1303)
Q Consensus 819 ~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 897 (1303)
++|+++++.+.++.|.++........+....... ....+......................... ............++
T Consensus 604 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 682 (1284)
T 3g5u_A 604 EQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRSTRKSI-CGPHDQDRKLSTKE 682 (1284)
T ss_dssp CEECHHHHHHTTSHHHHHHHHTC---------------------------------------------------------
T ss_pred EECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCHHH
T ss_conf 97889999867877999999743002211133333322222344333333332000345433344-56422332110245
Q ss_pred HH--HCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHCCCCCCC--CCCCHHHHHHHHHHHH
Q ss_conf 56--62751246799999980843799999999999999986244877----4300246678--8892388999999999
Q 000746 898 ER--ETGIVSGSVLTRYKNALGGPWVIMILFACYLSTEVLRISSSTWL----SFWTDQSTSK--NYNPGFYIAIYTILAF 969 (1303)
Q Consensus 898 ~~--~~g~v~~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl----~~w~~~~~~~--~~~~~~~l~iy~~l~~ 969 (1303)
.. .........+..|.+...... .+.+++.++........++++ ..|.+..... .....+|.++|+++++
T Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~i 760 (1284)
T 3g5u_A 683 ALDEDVPPASFWRILKLNSTEWPYF--VVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGI 760 (1284)
T ss_dssp -CCCCCSCCCTTHHHHHHHHTCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 5531366258999999845157999--99999999999999999999999999985568503367799999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999987739643433--4781025787513377877878999999999999999
Q 000746 970 GQVTVTLLNSYWLIISSLRAAKRLHDSMLNSILRAPMLFFH--TNPIGRVINRFSRDLGDIDRNVASFVNMFMNQLWQLL 1047 (1303)
Q Consensus 970 ~~~~~~~~~~~~~~~~~~~~s~~Lh~~l~~~il~~p~~fFd--~~~~G~ilnRfs~D~~~id~~l~~~~~~~~~~~~~~i 1047 (1303)
...++.++..+.+...+.+...++|.+++++++++|++||| ++++|+++||+++|++.+|..++..+..++..++.++
T Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~ 840 (1284)
T 3g5u_A 761 ISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLG 840 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999839988875789988999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHH
Q ss_conf 999999999989999---99999999999999999877999977500234289889997628065750471789999999
Q 000746 1048 STFVLIGIVSTISLW---AIMPLLILFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAFKAYDRMAKING 1124 (1303)
Q Consensus 1048 ~~~v~i~~~~~~~~~---~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~s~~~Etl~Gl~tIRAf~~e~~~~~~~~ 1124 (1303)
..++++....|.+.+ +++|+++++...+..+. +..........+.....+.|+++|+++||+|++|+++.+++.
T Consensus 841 ~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~ 917 (1284)
T 3g5u_A 841 TGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKML---SGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYA 917 (1284)
T ss_dssp HHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 99999999969999999999999999999999999---999999999999999999999988999998465999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 988866589999999879999999999999999---99999987067444434305699999999999999999999999
Q 000746 1125 KSMDNNIRFTLANTSSNRWLTIRLETLGGIMIW---LIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQA 1201 (1303)
Q Consensus 1125 ~~~d~~~~~~~~~~~~~~wl~~~l~ll~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~l~~~l~~~v~~~ 1201 (1303)
+..+...+...... .|.+....+...+..+ ....++... ........+.+...+.+......++..+...+
T Consensus 918 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~l---v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1284)
T 3g5u_A 918 QSLQIPYRNAMKKA---HVFGITFSFTQAMMYFSYAAAFRFGAYL---VTQQLMTFENVLLVFSAIVFGAMAVGQVSSFA 991 (1284)
T ss_dssp HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCC---CSSSCSCSTTHHHHHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999---9999999999999999999999999999---99098069999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCCCCCCEEEECCCCEEEEECCCC
Q ss_conf 999664349999997106999999888788999999996409999779983799-9995335306666997899987999
Q 000746 1202 SRAENSLNAVERVGTYIDLPSEAPGMVESNRPPPAWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTVSPSEKVGIVGRTG 1280 (1303)
Q Consensus 1202 ~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~G~Ief~nVsf~Y~~~-~~~VLk~Isl~I~pGekVaIVGrTG 1280 (1303)
..++....+.+|+.++++.++|.+...+ .+.+.++.+|.|+|+||+|+|+.+ ..++|+|+||+|+|||++||||+||
T Consensus 992 ~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~sG 1069 (1284)
T 3g5u_A 992 PDYAKATVSASHIIRIIEKTPEIDSYST--QGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSG 1069 (1284)
T ss_dssp CCSTHHHHHHHHHHHHHHSCCSSSSCCS--SCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSSS
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCCC
T ss_conf 9999999999999999838876666555--66545677785799998997799998700203059976998899988999
Q ss_pred CCHHHHHHHHHHCCCCCCCEEE
Q ss_conf 8988999999402269997162
Q 000746 1281 AGKSSMLNALFRIVELERGENI 1302 (1303)
Q Consensus 1281 SGKSTLi~lL~Rl~e~~~G~I~ 1302 (1303)
||||||+++|+|+++|++|+|.
T Consensus 1070 sGKSTl~~~l~g~~~p~~G~I~ 1091 (1284)
T 3g5u_A 1070 CGKSTVVQLLERFYDPMAGSVF 1091 (1284)
T ss_dssp TTHHHHHHHHTTSSCCSEEEEE
T ss_pred CCHHHHHHHHHCCCCCCCCEEE
T ss_conf 9789999999468678997798
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=553.46 Aligned_cols=511 Identities=18% Similarity=0.229 Sum_probs=358.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999998406996--3489999999999999999999999999999999999999999
Q 000746 328 RFWLGGLFKIGNDLSQFVGPVLLNHLLQSMQRGDP--AWIGYIYAFLIFVGVSFGVLTEAQYFQNVWRVGFRLRSTLVAA 405 (1303)
Q Consensus 328 ~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~--~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~l~~~ 405 (1303)
.++.+.+..++........++++...++....+.. ...+..|++..++..++..++.....+...+.+.++...+...
T Consensus 753 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~ 832 (1321)
T 4f4c_A 753 SLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNK 832 (1321)
T ss_dssp HHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999987517934556678999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999749911016--99968999999999999999999-9999998999999999999999979999999999999999
Q 000746 406 IFRKTLRLTHEARK--GFPSGKVTNMITTDANALQQISQ-QLHGLWSAPFRITLSMVLLYQQLGVASLLGSLMLVLMVPL 482 (1303)
Q Consensus 406 i~~k~l~l~~~~~~--~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~~~~~ll~~~lg~~~l~~~~v~~i~~~~ 482 (1303)
+|++.++.+....+ ++++|+++|+++.|++.++.... .+..+....+.++.++.++...-...+++.++++.+++..
T Consensus 833 l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~ 912 (1321)
T 4f4c_A 833 LFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFG 912 (1321)
T ss_dssp HHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98887349933321678884888850250599999999999999999865377770221378689999999988899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999964899998224899999999999999999999999999999999889688
Q 000746 483 QTFIISKMRKLTKEGLQWTDRRVSLTNEILAAMDTVKCYAWEKSFQSRVQSIRDDELSWFRKAQFLSAFNSFILNSIPVV 562 (1303)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~r~~E~~~~~~~~~~~~~~~~~~~~~~~~ 562 (1303)
..+..++..+.+.+..+...+......|.++|+++||.|++|+.+.+++.+..+...+...+......+...+......+
T Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1321)
T 4f4c_A 913 QYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYL 992 (1321)
T ss_dssp HHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999988898899999962798886141488999999999999999999999999999999999999
Q ss_pred --HHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCCC
Q ss_conf --67765356546079--8898899999999999999999999999999999999999999999886211999--99999
Q 000746 563 --VTVVSFGTFTLLGG--DLTPARAFTSLSLFAVLRFPLNMLPNLLSQVVNANVSLQRLEELLLAEERILMPN--PPLEP 636 (1303)
Q Consensus 563 --~~~~~f~~~~~~~~--~l~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~~~~s~~Ri~~fL~~~~~~~~~~--~~~~~ 636 (1303)
+.++.++.+.+..+ .+.+..++..+..+.....|+..+....+.+.++..+.+|+.++++.++..+... ++..+
T Consensus 993 ~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~ 1072 (1321)
T 4f4c_A 993 LNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLSLAGEKKK 1072 (1321)
T ss_dssp HHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTTCCCSBCCC
T ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99999987578875376542147899999999877889999999999999999999989998607665777667787888
Q ss_pred CCCCEEEEEEEEEECCCC--CCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEE-------------
Q ss_conf 999289993389728999--85300565724996999994999986789999846999999966999-------------
Q 000746 637 ELPAVSIKNGNFSWDSKS--PTLSNINLDIPVGSLVAIVGGTGEGKTSLVSAMLGELPPLKDASVVI------------- 701 (1303)
Q Consensus 637 ~~~~i~~~~~~f~~~~~~--~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llge~~~~~g~~~~~------------- 701 (1303)
....|+++|++|+|++++ ++|+|+||+|++|++++|||++|||||||+++|+|.++|.+| .+.+
T Consensus 1073 ~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G-~I~iDG~di~~i~~~~l 1151 (1321)
T 4f4c_A 1073 LYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGG-EIFIDGSEIKTLNPEHT 1151 (1321)
T ss_dssp CCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSS-EEEETTEETTTBCHHHH
T ss_pred CCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCC-EEEECCEEHHHCCHHHH
T ss_conf 88818999879857999988212451699889899999899998199999999568638997-89999998654999999
Q ss_pred CCEEEEECCCCCCCCCCHHHHHCCCC---CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 49179981686566655889970499---999565899998982388851099999731148988776689999999999
Q 000746 702 RGTVAYVPQISWIFNATLRKNILFGS---EFDPAKYWKTVDVSALQHDLDLLPDRDLTEIGERGVNISGGQKQRVSMARA 778 (1303)
Q Consensus 702 ~~~iayv~Q~pwl~~~TireNI~~g~---~~d~~~y~~vi~ac~L~~di~~lp~gd~T~ige~G~~LSGGQkqRiaLARA 778 (1303)
|++++||||+|.+|+|||||||.+|. ++++++.+++++.+++.+.++.+|+|++|.|||+|.+||||||||||||||
T Consensus 1152 R~~i~~V~Qdp~LF~gTIreNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARA 1231 (1321)
T 4f4c_A 1152 RSQIAIVSQEPTLFDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARA 1231 (1321)
T ss_dssp HTTEEEECSSCCCCSEEHHHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHH
T ss_pred HHHEEEECCCCEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHH
T ss_conf 85459987899732723999974549999999999999999829849997176789998238891569999999999999
Q ss_pred HH-----------------------HHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHHHCCHHHHH
Q ss_conf 99-----------------------8998675099879999249994001497999939879994397889733459999
Q 000746 779 VF-----------------------NSCIKEELRGKTRILVTNQLHFLPHVDRIILVSEGMIKEEGSFEELSKHGRLFQK 835 (1303)
Q Consensus 779 i~-----------------------~~~i~~~l~~~TvilvTH~~~~l~~aD~ii~l~~G~i~~~G~~~~l~~~~~~~~~ 835 (1303)
++ ++.+.+..+++|+|+|+|+++.+..||+|+||++|+|+|+|+|+||+++++.|++
T Consensus 1232 llr~~~ILiLDEaTSaLD~~tE~~Iq~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~~g~y~~ 1311 (1321)
T 4f4c_A 1232 LVRNPKILLLDEATSALDTESEKVVQEALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSEKGAYYK 1311 (1321)
T ss_dssp HHSCCSEEEEESCCCSTTSHHHHHHHHHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHCC-----
T ss_pred HHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHH
T ss_conf 97179989996811157899999999999997399989996068999996999999989899998888999849809999
Q ss_pred HHHH
Q ss_conf 9997
Q 000746 836 LMEN 839 (1303)
Q Consensus 836 ~~~~ 839 (1303)
+++.
T Consensus 1312 L~~~ 1315 (1321)
T 4f4c_A 1312 LTQK 1315 (1321)
T ss_dssp ----
T ss_pred HHHH
T ss_conf 9999
No 4
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=548.05 Aligned_cols=516 Identities=20% Similarity=0.274 Sum_probs=414.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99868999999999999999999999999999984069963489999999999999999999999999999999999999
Q 000746 323 NSFGGRFWLGGLFKIGNDLSQFVGPVLLNHLLQSMQRGDPAWIGYIYAFLIFVGVSFGVLTEAQYFQNVWRVGFRLRSTL 402 (1303)
Q Consensus 323 ~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~l 402 (1303)
+.+++.++...++.++..++..+.|++++.+++.+..+.....-..+++.+.+..++..++.....+...+.+.++...+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 112 (598)
T 3qf4_B 33 RPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDVVFRL 112 (598)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999736888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999974991101699968999999999999999999-999999899999999999999997999999999999999
Q 000746 403 VAAIFRKTLRLTHEARKGFPSGKVTNMITTDANALQQISQ-QLHGLWSAPFRITLSMVLLYQQLGVASLLGSLMLVLMVP 481 (1303)
Q Consensus 403 ~~~i~~k~l~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~~~~~ll~~~lg~~~l~~~~v~~i~~~ 481 (1303)
+..+|+|.++++....++.++|+++|++++|++.+.+.+. .+..++..++.++.++.+++..-+..+++.++++.+...
T Consensus 113 r~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~~~~l~~~ 192 (598)
T 3qf4_B 113 RKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLTVL 192 (598)
T ss_dssp HHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999779999976888899999999999999999999999999999999999999999989999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999996489999822489999999999999999999999999999999988968
Q 000746 482 LQTFIISKMRKLTKEGLQWTDRRVSLTNEILAAMDTVKCYAWEKSFQSRVQSIRDDELSWFRKAQFLSAFNSFILNSIPV 561 (1303)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~r~~E~~~~~~~~~~~~~~~~~~~~~~~ 561 (1303)
+..++.++..+.+++..+..+++.+.+.|.++|+++||.|++|+.+.+++.+.+++..+...+......+...+......
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (598)
T 3qf4_B 193 ITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMVNN 272 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999973799999748709999999999999999999999999999999999999
Q ss_pred --HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCC
Q ss_conf --8677653565460798898899999999999999999999999999999999999999999886211999-9999999
Q 000746 562 --VVTVVSFGTFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNLLSQVVNANVSLQRLEELLLAEERILMPN-PPLEPEL 638 (1303)
Q Consensus 562 --~~~~~~f~~~~~~~~~l~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~~~~s~~Ri~~fL~~~~~~~~~~-~~~~~~~ 638 (1303)
.+.++.++.+....+.++++.+++.+.+...+..|+..++..+..+.++.++++|+.++++.++....+. .+..+..
T Consensus 273 ~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~ 352 (598)
T 3qf4_B 273 LGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDDPDAVELREVR 352 (598)
T ss_dssp HHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCSSCCCCCSCC
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 99999999999999859978999999999999999999999999999999999999999997688777777777777777
Q ss_pred CCEEEEEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEECC-------------EE
Q ss_conf 92899933897289998530056572499699999499998678999984699999996699949-------------17
Q 000746 639 PAVSIKNGNFSWDSKSPTLSNINLDIPVGSLVAIVGGTGEGKTSLVSAMLGELPPLKDASVVIRG-------------TV 705 (1303)
Q Consensus 639 ~~i~~~~~~f~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llge~~~~~g~~~~~~~-------------~i 705 (1303)
..++++|++|+|+++.++|+|+|+++++|++++|+||+|||||||+++|+|+++|.+| .+.++| ++
T Consensus 353 ~~i~~~~v~~~y~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G-~i~~~g~~i~~~~~~~~r~~i 431 (598)
T 3qf4_B 353 GEIEFKNVWFSYDKKKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRG-QILVDGIDIRKIKRSSLRSSI 431 (598)
T ss_dssp CCEEEEEEECCSSSSSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEE-EEEETTEEGGGSCHHHHHHHE
T ss_pred CEEEEEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCE-EEEECCEEHHHCCHHHHHHCE
T ss_conf 7189999899779998601222799869988999899999699999999458579980-899999983018899998410
Q ss_pred EEECCCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH---
Q ss_conf 99816865666558899704999-99565899998982388851099999731148988776689999999999998---
Q 000746 706 AYVPQISWIFNATLRKNILFGSE-FDPAKYWKTVDVSALQHDLDLLPDRDLTEIGERGVNISGGQKQRVSMARAVFN--- 781 (1303)
Q Consensus 706 ayv~Q~pwl~~~TireNI~~g~~-~d~~~y~~vi~ac~L~~di~~lp~gd~T~ige~G~~LSGGQkqRiaLARAi~~--- 781 (1303)
+|++|+|++|++|++|||.+|.+ .++++++++++.++++++++.+|+|++|.+|++|.+||||||||++||||++.
T Consensus 432 ~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~Qrv~iAral~~~p~ 511 (598)
T 3qf4_B 432 GIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLANPK 511 (598)
T ss_dssp EEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHHHHHHHHHHHHTCCS
T ss_pred EEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 89907982324639999744799999999999999969788897464532364227889879999999999999964999
Q ss_pred --------------------HHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHHHCCHHHHHHHHH
Q ss_conf --------------------9986750998799992499940014979999398799943978897334599999997
Q 000746 782 --------------------SCIKEELRGKTRILVTNQLHFLPHVDRIILVSEGMIKEEGSFEELSKHGRLFQKLMEN 839 (1303)
Q Consensus 782 --------------------~~i~~~l~~~TvilvTH~~~~l~~aD~ii~l~~G~i~~~G~~~~l~~~~~~~~~~~~~ 839 (1303)
+.+.+..+++|+|++||+++.+..||+|++|++|+++++|+++|+.+.++.|.++...
T Consensus 512 illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 589 (598)
T 3qf4_B 512 ILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFYYELFTS 589 (598)
T ss_dssp EEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHHHHHTTCHHHHHHHH
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHH
T ss_conf 999989766799999999999999980899899994277899719989999899999877899998678779999999
No 5
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=547.61 Aligned_cols=518 Identities=20% Similarity=0.296 Sum_probs=414.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-C-HHH-----HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999986899999999999999999999999999998406996-3-489-----99999999999999999999999999
Q 000746 320 ALNNSFGGRFWLGGLFKIGNDLSQFVGPVLLNHLLQSMQRGDP-A-WIG-----YIYAFLIFVGVSFGVLTEAQYFQNVW 392 (1303)
Q Consensus 320 ~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~-~-~~~-----~~~a~~l~~~~~~~~~~~~~~~~~~~ 392 (1303)
.+.+.+++.++...++.++..++..+.|++++.+++.+..... . ... +.+++.+++..++..++.....+...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (578)
T 4a82_A 7 QFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQ 86 (578)
T ss_dssp HHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99889999999999999999999999999999999999816871146778888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999749911016999689999999999999999999-9999989999999999999999799999
Q 000746 393 RVGFRLRSTLVAAIFRKTLRLTHEARKGFPSGKVTNMITTDANALQQISQQ-LHGLWSAPFRITLSMVLLYQQLGVASLL 471 (1303)
Q Consensus 393 r~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~pl~i~~~~~ll~~~lg~~~l~ 471 (1303)
+.+.++...++..+|+|.++++....++.++|+++|++++|++++.+.+.. +..+|..++.+++++.+++..-+..+++
T Consensus 87 ~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~ 166 (578)
T 4a82_A 87 WTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLA 166 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999987899997689869999999999999999999999999999999999999999996999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999648999982248999999999999999999999999999
Q 000746 472 GSLMLVLMVPLQTFIISKMRKLTKEGLQWTDRRVSLTNEILAAMDTVKCYAWEKSFQSRVQSIRDDELSWFRKAQFLSAF 551 (1303)
Q Consensus 472 ~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~r~~E~~~~~~~~~~~~~ 551 (1303)
.++++.++..+..++.++..+.+++..+..+++.+.+.|.++|+++||+|++|+.+.+++.+.+++..+...+.......
T Consensus 167 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (578)
T 4a82_A 167 ALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRWNAY 246 (578)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998249999981664999999999999999999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999889688--6776535654607988988999999999999999999999999999999999999999998862119
Q 000746 552 NSFILNSIPVV--VTVVSFGTFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNLLSQVVNANVSLQRLEELLLAEERILM 629 (1303)
Q Consensus 552 ~~~~~~~~~~~--~~~~~f~~~~~~~~~l~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~~~~s~~Ri~~fL~~~~~~~~ 629 (1303)
...+......+ +.++.++.+.+..+.++++.+++.+.++..+..|+..++..+..+.++.++++|+.++++.++....
T Consensus 247 ~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 326 (578)
T 4a82_A 247 SFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKN 326 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999985995899999999999999999999999999999999999999999768976667
Q ss_pred CCC--CCCCCCCCEEEEEEEEEECC-CCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEECC---
Q ss_conf 999--99999992899933897289-998530056572499699999499998678999984699999996699949---
Q 000746 630 PNP--PLEPELPAVSIKNGNFSWDS-KSPTLSNINLDIPVGSLVAIVGGTGEGKTSLVSAMLGELPPLKDASVVIRG--- 703 (1303)
Q Consensus 630 ~~~--~~~~~~~~i~~~~~~f~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llge~~~~~g~~~~~~~--- 703 (1303)
... +..+....++++|++|+|++ +.++|+|+|+++++|++++|+||+|||||||+++|+|+++|.+| .+.++|
T Consensus 327 ~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G-~i~~~g~~~ 405 (578)
T 4a82_A 327 GVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSG-QILIDGHNI 405 (578)
T ss_dssp CTTCCCCCCCSCCEEEEEEEECSCSSSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEE-EEEETTEEG
T ss_pred CCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCC-EEEECCEEH
T ss_conf 8776666777880799999997589997413433799879999999899998599999998467889996-799999984
Q ss_pred ----------EEEEECCCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf ----------1799816865666558899704999-99565899998982388851099999731148988776689999
Q 000746 704 ----------TVAYVPQISWIFNATLRKNILFGSE-FDPAKYWKTVDVSALQHDLDLLPDRDLTEIGERGVNISGGQKQR 772 (1303)
Q Consensus 704 ----------~iayv~Q~pwl~~~TireNI~~g~~-~d~~~y~~vi~ac~L~~di~~lp~gd~T~ige~G~~LSGGQkqR 772 (1303)
+++|++|+||+|++|++|||.+|.+ .++++..++++.+++.++++.+|+|++|.+|++|.+||||||||
T Consensus 406 ~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~LSgGq~Qr 485 (578)
T 4a82_A 406 KDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQR 485 (578)
T ss_dssp GGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTSCHHHHHH
T ss_pred HHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCCCHHHHHH
T ss_conf 42789999600689928983476459999852799988999999998809599997573301025306889679999999
Q ss_pred HHHHHHHHH-----------------------HHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHHHC
Q ss_conf 999999998-----------------------998675099879999249994001497999939879994397889733
Q 000746 773 VSMARAVFN-----------------------SCIKEELRGKTRILVTNQLHFLPHVDRIILVSEGMIKEEGSFEELSKH 829 (1303)
Q Consensus 773 iaLARAi~~-----------------------~~i~~~l~~~TvilvTH~~~~l~~aD~ii~l~~G~i~~~G~~~~l~~~ 829 (1303)
++||||++. +.+.+..+++|+|++||+++.+..||+|++|++|+++++|+++|+.+.
T Consensus 486 v~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~el~~~ 565 (578)
T 4a82_A 486 LSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAK 565 (578)
T ss_dssp HHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEECHHHHHHT
T ss_pred HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHC
T ss_conf 99999997499999997865457999999999999998089979998317899971998999989989998889999858
Q ss_pred CHHHHHHHH
Q ss_conf 459999999
Q 000746 830 GRLFQKLME 838 (1303)
Q Consensus 830 ~~~~~~~~~ 838 (1303)
++.|.++.+
T Consensus 566 ~~~~~~~~~ 574 (578)
T 4a82_A 566 QGAYEHLYS 574 (578)
T ss_dssp TSHHHHHHT
T ss_pred CCHHHHHHH
T ss_conf 838999998
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=537.11 Aligned_cols=520 Identities=21% Similarity=0.281 Sum_probs=398.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999986899999999999999999999999999998406996348999999999999999999999999999999999
Q 000746 319 RALNNSFGGRFWLGGLFKIGNDLSQFVGPVLLNHLLQSMQRGDPAWIGYIYAFLIFVGVSFGVLTEAQYFQNVWRVGFRL 398 (1303)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~r~~~~i 398 (1303)
+.+++.+++.++...++.++..++..++|++++.+++...........+.+++.+.+..++..++.....+...+.+.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (587)
T 3qf4_A 15 ARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGDFSLVLKTGILMLIVALIGAVGGIGCTVFASYASQNF 94 (587)
T ss_dssp GGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999873698799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999749911016999689999999999999999999-9999989999999999999999799999999999
Q 000746 399 RSTLVAAIFRKTLRLTHEARKGFPSGKVTNMITTDANALQQISQQ-LHGLWSAPFRITLSMVLLYQQLGVASLLGSLMLV 477 (1303)
Q Consensus 399 r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~pl~i~~~~~ll~~~lg~~~l~~~~v~~ 477 (1303)
...++..+|+|.++++....++.++|+++|++++|++++.+.... +..++..++.++.++++++..-+..+++.++++.
T Consensus 95 ~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~~~~ 174 (587)
T 3qf4_A 95 GADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSSVLIFLIP 174 (587)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999978897997658889999999999999999999999999999999999999999998999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999648999982248999999999999999999999999999999998
Q 000746 478 LMVPLQTFIISKMRKLTKEGLQWTDRRVSLTNEILAAMDTVKCYAWEKSFQSRVQSIRDDELSWFRKAQFLSAFNSFILN 557 (1303)
Q Consensus 478 i~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~r~~E~~~~~~~~~~~~~~~~~~~ 557 (1303)
++..+..++.++..+..++..+..+++.+.+.|.++|+++||.|++|+.+.+++.+..++..+...+..........+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (587)
T 3qf4_A 175 PIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIVFALPLFI 254 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999998559999986214999999999999999999999999999999999
Q ss_pred H--HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--C
Q ss_conf 8--96886776535654607988988999999999999999999999999999999999999999998862119999--9
Q 000746 558 S--IPVVVTVVSFGTFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNLLSQVVNANVSLQRLEELLLAEERILMPNP--P 633 (1303)
Q Consensus 558 ~--~~~~~~~~~f~~~~~~~~~l~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~~~~s~~Ri~~fL~~~~~~~~~~~--~ 633 (1303)
. ....+.++.++.+...++.++.+.+++.+.++..+..|+..++..+..+.++.++.+|+.++++.++....... +
T Consensus 255 ~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~ 334 (587)
T 3qf4_A 255 FIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIEEADNALA 334 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCCCTTCBC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 99999999999999999984993899999999999999999999999999999999999999999768976578877656
Q ss_pred CCCCCCCEEEEEEEEEECC-CCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEC----------
Q ss_conf 9999992899933897289-99853005657249969999949999867899998469999999669994----------
Q 000746 634 LEPELPAVSIKNGNFSWDS-KSPTLSNINLDIPVGSLVAIVGGTGEGKTSLVSAMLGELPPLKDASVVIR---------- 702 (1303)
Q Consensus 634 ~~~~~~~i~~~~~~f~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llge~~~~~g~~~~~~---------- 702 (1303)
..+....|+++|++|+|++ +.++|+|+||++++|++++|+||+|||||||+++|+|.++|.+| .+.++
T Consensus 335 ~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G-~i~i~g~~i~~~~~~ 413 (587)
T 3qf4_A 335 LPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERG-RVEVDELDVRTVKLK 413 (587)
T ss_dssp CSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEE-EEEESSSBGGGBCHH
T ss_pred CCCCCCCEEEEEEEEECCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC-EEEECCEECCCCCHH
T ss_conf 6888880799788998489997642111799869988999899999799999999278669986-798999983407899
Q ss_pred ---CEEEEECCCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf ---91799816865666558899704999-99565899998982388851099999731148988776689999999999
Q 000746 703 ---GTVAYVPQISWIFNATLRKNILFGSE-FDPAKYWKTVDVSALQHDLDLLPDRDLTEIGERGVNISGGQKQRVSMARA 778 (1303)
Q Consensus 703 ---~~iayv~Q~pwl~~~TireNI~~g~~-~d~~~y~~vi~ac~L~~di~~lp~gd~T~ige~G~~LSGGQkqRiaLARA 778 (1303)
++++|++|+|++|++|++|||.+|.+ .+++++.++++.+++.++++.+|+|++|.+|++|.+||||||||++||||
T Consensus 414 ~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGqrQrv~lARa 493 (587)
T 3qf4_A 414 DLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQKQRLSIARA 493 (587)
T ss_dssp HHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHHHHHHHHHHH
T ss_pred HHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 99841389778986767559999852488999999999999968499997565312127518989929999999999999
Q ss_pred HHH-----------------------HHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHHHCCHHHHH
Q ss_conf 998-----------------------998675099879999249994001497999939879994397889733459999
Q 000746 779 VFN-----------------------SCIKEELRGKTRILVTNQLHFLPHVDRIILVSEGMIKEEGSFEELSKHGRLFQK 835 (1303)
Q Consensus 779 i~~-----------------------~~i~~~l~~~TvilvTH~~~~l~~aD~ii~l~~G~i~~~G~~~~l~~~~~~~~~ 835 (1303)
++. +.+.+..+++|+|++||+++.+..||+|++|++|+++++|+++|+.+.++.|.+
T Consensus 494 l~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~ 573 (587)
T 3qf4_A 494 LVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKELLEHCKPYRE 573 (587)
T ss_dssp HHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHHHHHCHHHHH
T ss_pred HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHH
T ss_conf 97299999997975447999999999999986799989998227688981998999989989997889999867839999
Q ss_pred HHHH
Q ss_conf 9997
Q 000746 836 LMEN 839 (1303)
Q Consensus 836 ~~~~ 839 (1303)
+...
T Consensus 574 ~~~~ 577 (587)
T 3qf4_A 574 IYES 577 (587)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9999
No 7
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=521.32 Aligned_cols=518 Identities=20% Similarity=0.245 Sum_probs=399.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998689999999999999999999999999999840699634899999999999999999999999999999999999
Q 000746 321 LNNSFGGRFWLGGLFKIGNDLSQFVGPVLLNHLLQSMQRGDPAWIGYIYAFLIFVGVSFGVLTEAQYFQNVWRVGFRLRS 400 (1303)
Q Consensus 321 l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~ 400 (1303)
..+.+++.++...++.++..++..+.|++++.+++.+.........+.+++.+.+..++..++.....+...+.+.++..
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (582)
T 3b60_A 19 TIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKVVM 98 (582)
T ss_dssp HHGGGHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999884368657999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999997499110169996899999999999999999-99999998999999999999999979999999999999
Q 000746 401 TLVAAIFRKTLRLTHEARKGFPSGKVTNMITTDANALQQIS-QQLHGLWSAPFRITLSMVLLYQQLGVASLLGSLMLVLM 479 (1303)
Q Consensus 401 ~l~~~i~~k~l~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~pl~i~~~~~ll~~~lg~~~l~~~~v~~i~ 479 (1303)
.++..+|+|.++++....++.++|+++|++++|++.+.+.. ..+..++..++.+++++++++..-++.+++.++++.+.
T Consensus 99 ~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~l~ 178 (582)
T 3b60_A 99 TMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVVLAPIV 178 (582)
T ss_dssp HHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998099999788986589999998799999999999999999999999999999998099999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999964899998224899999999999999999999999999999999889
Q 000746 480 VPLQTFIISKMRKLTKEGLQWTDRRVSLTNEILAAMDTVKCYAWEKSFQSRVQSIRDDELSWFRKAQFLSAFNSFILNSI 559 (1303)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~r~~E~~~~~~~~~~~~~~~~~~~~~ 559 (1303)
..+..++.++..+..++..+..+++.+.+.|.++|+++||.|++|+.+.+++.+..++..+...+......+...+....
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (582)
T 3b60_A 179 SIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLI 258 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999961999998376899999999999999999999999999999999999
Q ss_pred HH--HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 68--8677653565460798898899999999999999999999999999999999999999999886211999999999
Q 000746 560 PV--VVTVVSFGTFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNLLSQVVNANVSLQRLEELLLAEERILMPNPPLEPE 637 (1303)
Q Consensus 560 ~~--~~~~~~f~~~~~~~~~l~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~~~~s~~Ri~~fL~~~~~~~~~~~~~~~~ 637 (1303)
.. .+.++.++.+.+..+.++.+.+++.+.++..+..|+..++..+..+.++.++++|+.++++.++.......+..+.
T Consensus 259 ~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~ 338 (582)
T 3b60_A 259 ASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRVIDRA 338 (582)
T ss_dssp HHHHHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCCCCBCCSCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99999999999999998499989999999999999999999999999999999999999999975998766777777788
Q ss_pred CCCEEEEEEEEEECCC-CCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEECC-------------
Q ss_conf 9928999338972899-98530056572499699999499998678999984699999996699949-------------
Q 000746 638 LPAVSIKNGNFSWDSK-SPTLSNINLDIPVGSLVAIVGGTGEGKTSLVSAMLGELPPLKDASVVIRG------------- 703 (1303)
Q Consensus 638 ~~~i~~~~~~f~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llge~~~~~g~~~~~~~------------- 703 (1303)
...++++|++|+|+++ .++|+|+|+++++|++++|+||+|||||||+++|+|.++|.+| .+.++|
T Consensus 339 ~~~i~~~~v~~~y~~~~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G-~i~~~g~~~~~~~~~~~~~ 417 (582)
T 3b60_A 339 TGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEG-HILMDGHDLREYTLASLRN 417 (582)
T ss_dssp CCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEE-EEEETTEETTTBCHHHHHH
T ss_pred CCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCC-EEEECCEECCCCCHHHHHH
T ss_conf 884799988997399997441561599769998999899999899999998610689897-6979999823069999996
Q ss_pred EEEEECCCCCCCCCCHHHHHCCCC--CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 179981686566655889970499--999565899998982388851099999731148988776689999999999998
Q 000746 704 TVAYVPQISWIFNATLRKNILFGS--EFDPAKYWKTVDVSALQHDLDLLPDRDLTEIGERGVNISGGQKQRVSMARAVFN 781 (1303)
Q Consensus 704 ~iayv~Q~pwl~~~TireNI~~g~--~~d~~~y~~vi~ac~L~~di~~lp~gd~T~ige~G~~LSGGQkqRiaLARAi~~ 781 (1303)
+++|++|+|++|++|++|||.++. +.++++++++++.+++.+.++.+|+|++|.+|++|.+||||||||++||||++.
T Consensus 418 ~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LSgGq~qrl~iAral~~ 497 (582)
T 3b60_A 418 QVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLR 497 (582)
T ss_dssp TEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHHHHHHHHHHHHHH
T ss_pred HCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 08088068747787899998545999989999999999849799998450411451147988789999999999999972
Q ss_pred -----------------------HHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHHHCCHHHHHHHH
Q ss_conf -----------------------998675099879999249994001497999939879994397889733459999999
Q 000746 782 -----------------------SCIKEELRGKTRILVTNQLHFLPHVDRIILVSEGMIKEEGSFEELSKHGRLFQKLME 838 (1303)
Q Consensus 782 -----------------------~~i~~~l~~~TvilvTH~~~~l~~aD~ii~l~~G~i~~~G~~~~l~~~~~~~~~~~~ 838 (1303)
+.+.+..+++|+|++||+++.+..||+|++|++|++++.|+++++.+.++.|+++.+
T Consensus 498 ~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 577 (582)
T 3b60_A 498 DSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQHGVYAQLHK 577 (582)
T ss_dssp CCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECHHHHHHHTSSHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHH
T ss_conf 89989997865557989999999999999679979999454778985998999978889884589999876988999999
Q ss_pred H
Q ss_conf 7
Q 000746 839 N 839 (1303)
Q Consensus 839 ~ 839 (1303)
.
T Consensus 578 ~ 578 (582)
T 3b60_A 578 M 578 (582)
T ss_dssp H
T ss_pred H
T ss_conf 7
No 8
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=520.79 Aligned_cols=518 Identities=20% Similarity=0.236 Sum_probs=400.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998689999999999999999999999999999840699634899999999999999999999999999999999999
Q 000746 321 LNNSFGGRFWLGGLFKIGNDLSQFVGPVLLNHLLQSMQRGDPAWIGYIYAFLIFVGVSFGVLTEAQYFQNVWRVGFRLRS 400 (1303)
Q Consensus 321 l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~ 400 (1303)
+.+.+++.++...++.++..++..+.|++++.+++.+..+......+.+++.+.+..++..++.....+...+.+.++..
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (582)
T 3b5x_A 19 YIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFASSYCLSWVSGNVVM 98 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98899999999999999999999999999999999986468667999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999997499110169996899999999999999999-99999998999999999999999979999999999999
Q 000746 401 TLVAAIFRKTLRLTHEARKGFPSGKVTNMITTDANALQQIS-QQLHGLWSAPFRITLSMVLLYQQLGVASLLGSLMLVLM 479 (1303)
Q Consensus 401 ~l~~~i~~k~l~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~pl~i~~~~~ll~~~lg~~~l~~~~v~~i~ 479 (1303)
.++..+|+|.++++....++.++|++++++++|++.+.+.+ ..+..++..++.+++++++++..-+..+++.++++.+.
T Consensus 99 ~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~l~ 178 (582)
T 3b5x_A 99 QMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVV 178 (582)
T ss_pred HHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998699999778987899999998899999999999999999999999999999998299999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999964899998224899999999999999999999999999999999889
Q 000746 480 VPLQTFIISKMRKLTKEGLQWTDRRVSLTNEILAAMDTVKCYAWEKSFQSRVQSIRDDELSWFRKAQFLSAFNSFILNSI 559 (1303)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~r~~E~~~~~~~~~~~~~~~~~~~~~ 559 (1303)
..+..++.++..+..++..+..+++.+.+.|.++|+++||.|++|+.+.+++.+..++..+...+......+...+....
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (582)
T 3b5x_A 179 AFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQMI 258 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999951999997087599999999999999999999999999999999999
Q ss_pred HH--HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 68--8677653565460798898899999999999999999999999999999999999999999886211999999999
Q 000746 560 PV--VVTVVSFGTFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNLLSQVVNANVSLQRLEELLLAEERILMPNPPLEPE 637 (1303)
Q Consensus 560 ~~--~~~~~~f~~~~~~~~~l~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~~~~s~~Ri~~fL~~~~~~~~~~~~~~~~ 637 (1303)
.. .+.++.++.+.+..+.++.+.+++.+.++..+..|+..+...+..+.++.++++|+.++++.++.......+..+.
T Consensus 259 ~~~~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~ 338 (582)
T 3b5x_A 259 ASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERDNGKYEAERV 338 (582)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99999999999999998599889999999999999999999999999999999999999999975897677777777778
Q ss_pred CCCEEEEEEEEEECCC-CCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEC-------------C
Q ss_conf 9928999338972899-9853005657249969999949999867899998469999999669994-------------9
Q 000746 638 LPAVSIKNGNFSWDSK-SPTLSNINLDIPVGSLVAIVGGTGEGKTSLVSAMLGELPPLKDASVVIR-------------G 703 (1303)
Q Consensus 638 ~~~i~~~~~~f~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llge~~~~~g~~~~~~-------------~ 703 (1303)
...++++|++|+|+++ .++|+|+|+++++|++++|+||+|||||||+++|+|.++|.+| .+.++ .
T Consensus 339 ~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G-~i~~~g~~~~~~~~~~~~~ 417 (582)
T 3b5x_A 339 NGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSG-SICLDGHDVRDYKLTNLRR 417 (582)
T ss_pred CCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC-EEEECCEEHHHCCHHHHHC
T ss_conf 882899998997289986540041699879998999899999799999999657789998-7989999856388999964
Q ss_pred EEEEECCCCCCCCCCHHHHHCCCC--CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 179981686566655889970499--999565899998982388851099999731148988776689999999999998
Q 000746 704 TVAYVPQISWIFNATLRKNILFGS--EFDPAKYWKTVDVSALQHDLDLLPDRDLTEIGERGVNISGGQKQRVSMARAVFN 781 (1303)
Q Consensus 704 ~iayv~Q~pwl~~~TireNI~~g~--~~d~~~y~~vi~ac~L~~di~~lp~gd~T~ige~G~~LSGGQkqRiaLARAi~~ 781 (1303)
.++|++|+|++|++|++|||.+|. +.++++++++++.+++.+.++.+|+|++|.+|++|.+||||||||++||||++.
T Consensus 418 ~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LSgGq~qr~~iAral~~ 497 (582)
T 3b5x_A 418 HFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARALLR 497 (582)
T ss_pred CEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 85898279905310299998566889999999999999879899998476533451068888479999999999999974
Q ss_pred -----------------------HHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHHHCCHHHHHHHH
Q ss_conf -----------------------998675099879999249994001497999939879994397889733459999999
Q 000746 782 -----------------------SCIKEELRGKTRILVTNQLHFLPHVDRIILVSEGMIKEEGSFEELSKHGRLFQKLME 838 (1303)
Q Consensus 782 -----------------------~~i~~~l~~~TvilvTH~~~~l~~aD~ii~l~~G~i~~~G~~~~l~~~~~~~~~~~~ 838 (1303)
+.+.+..+++|+|++||+++.+..||+|++|++|++++.|+++++.+.++.|+++.+
T Consensus 498 ~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 577 (582)
T 3b5x_A 498 DAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQDGAYAQLHR 577 (582)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHH
T ss_conf 99999997854468999999999999997289989999368899981998999989989997789999848858999999
Q ss_pred H
Q ss_conf 7
Q 000746 839 N 839 (1303)
Q Consensus 839 ~ 839 (1303)
.
T Consensus 578 ~ 578 (582)
T 3b5x_A 578 I 578 (582)
T ss_pred H
T ss_conf 8
No 9
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=509.57 Aligned_cols=517 Identities=20% Similarity=0.275 Sum_probs=391.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999986899999999999999999999999999998406996--34899-999999999999999999999999999999
Q 000746 321 LNNSFGGRFWLGGLFKIGNDLSQFVGPVLLNHLLQSMQRGDP--AWIGY-IYAFLIFVGVSFGVLTEAQYFQNVWRVGFR 397 (1303)
Q Consensus 321 l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~--~~~~~-~~a~~l~~~~~~~~~~~~~~~~~~~r~~~~ 397 (1303)
..+.+++.++...++.++..++..+.|++++.+++.+..... ..... .+...+.+..++..++.....+...+.+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (595)
T 2yl4_A 13 LAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTSGQR 92 (595)
T ss_dssp HHGGGHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98878999999999999999999999999999999997357402667999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999997499110169996899999999999999999-99999998999999999999999979999999999
Q 000746 398 LRSTLVAAIFRKTLRLTHEARKGFPSGKVTNMITTDANALQQIS-QQLHGLWSAPFRITLSMVLLYQQLGVASLLGSLML 476 (1303)
Q Consensus 398 ir~~l~~~i~~k~l~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~pl~i~~~~~ll~~~lg~~~l~~~~v~ 476 (1303)
+...++..+|+|.++++....++.++|+++|++++|++.+.+.+ ..+..++..++.+++++.+++..-+..+++.++.+
T Consensus 93 ~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~ 172 (595)
T 2yl4_A 93 IVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATFVLSVV 172 (595)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999998199999777984889999999999999999999999999999999999999998199999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999964899998224899999999999999999999999999999999
Q 000746 477 VLMVPLQTFIISKMRKLTKEGLQWTDRRVSLTNEILAAMDTVKCYAWEKSFQSRVQSIRDDELSWFRKAQFLSAFNSFIL 556 (1303)
Q Consensus 477 ~i~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~r~~E~~~~~~~~~~~~~~~~~~ 556 (1303)
.+...+..++.++..+..++..+..++..+.+.|.++|+++||.|++|+.+.+++.+..++..+...+......+...+.
T Consensus 173 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (595)
T 2yl4_A 173 PPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGFFGAT 252 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999811999998375699999999999999999999999999999999
Q ss_pred HHHH--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--
Q ss_conf 8896--886776535654607988988999999999999999999999999999999999999999998862119999--
Q 000746 557 NSIP--VVVTVVSFGTFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNLLSQVVNANVSLQRLEELLLAEERILMPNP-- 632 (1303)
Q Consensus 557 ~~~~--~~~~~~~f~~~~~~~~~l~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~~~~s~~Ri~~fL~~~~~~~~~~~-- 632 (1303)
.... ..+.++.+|.+.+.++.++++..++.+.+...+..|+..++..+..+.++.++.+|+.++++.++.......
T Consensus 253 ~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~ 332 (595)
T 2yl4_A 253 GLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLPFNEGVI 332 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSCSSCSBC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 99999999999999999998699789999999999999999999999999999999999999999983897667777877
Q ss_pred CCCCCCCC-EEEEEEEEEECCC--CCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEECC------
Q ss_conf 99999992-8999338972899--98530056572499699999499998678999984699999996699949------
Q 000746 633 PLEPELPA-VSIKNGNFSWDSK--SPTLSNINLDIPVGSLVAIVGGTGEGKTSLVSAMLGELPPLKDASVVIRG------ 703 (1303)
Q Consensus 633 ~~~~~~~~-i~~~~~~f~~~~~--~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llge~~~~~g~~~~~~~------ 703 (1303)
+..+.... ++++|++|+|+++ .++|+|+|+++++|++++|+||+|||||||+++|+|.++|.+| .+.++|
T Consensus 333 ~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G-~i~~~g~~i~~~ 411 (595)
T 2yl4_A 333 LNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASG-TISLDGHDIRQL 411 (595)
T ss_dssp CCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEE-EEEETTEETTTB
T ss_pred CCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC-EEEECCEEHHHC
T ss_conf 7767899838999889985899888120112799849988999899999799999998258578983-799999981117
Q ss_pred -------EEEEECCCCCCCCCCHHHHHCCCCC----CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf -------1799816865666558899704999----99565899998982388851099999731148988776689999
Q 000746 704 -------TVAYVPQISWIFNATLRKNILFGSE----FDPAKYWKTVDVSALQHDLDLLPDRDLTEIGERGVNISGGQKQR 772 (1303)
Q Consensus 704 -------~iayv~Q~pwl~~~TireNI~~g~~----~d~~~y~~vi~ac~L~~di~~lp~gd~T~ige~G~~LSGGQkqR 772 (1303)
+++|++|+|+++++|++|||.+|.+ .++++++++++.+++.+.++.+|+|++|.+|++|.+||||||||
T Consensus 412 ~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~LSgGq~qr 491 (595)
T 2yl4_A 412 NPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQR 491 (595)
T ss_dssp CHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCCCCHHHHHH
T ss_pred CHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99999732289836883268779999840587766568999999999869799997473201350168878689999999
Q ss_pred HHHHHHHHH-----------------------HHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHHHC
Q ss_conf 999999998-----------------------998675099879999249994001497999939879994397889733
Q 000746 773 VSMARAVFN-----------------------SCIKEELRGKTRILVTNQLHFLPHVDRIILVSEGMIKEEGSFEELSKH 829 (1303)
Q Consensus 773 iaLARAi~~-----------------------~~i~~~l~~~TvilvTH~~~~l~~aD~ii~l~~G~i~~~G~~~~l~~~ 829 (1303)
++||||++. +.+.+..+++|+|++||+++.+..||+|++|++|++++.|+++|+.++
T Consensus 492 v~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 571 (595)
T 2yl4_A 492 IAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYGKHEELLSK 571 (595)
T ss_dssp HHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEEECSCC----
T ss_pred HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHC
T ss_conf 99999997599999998866689989999999999999659979999468789975998999989989997889999747
Q ss_pred -CHHHHHHHH
Q ss_conf -459999999
Q 000746 830 -GRLFQKLME 838 (1303)
Q Consensus 830 -~~~~~~~~~ 838 (1303)
++.|.++..
T Consensus 572 ~~~~~~~~~~ 581 (595)
T 2yl4_A 572 PNGIYRKLMN 581 (595)
T ss_dssp --C-------
T ss_pred CCHHHHHHHH
T ss_conf 8729999999
No 10
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=475.14 Aligned_cols=511 Identities=17% Similarity=0.255 Sum_probs=363.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-H---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999984069963-4---8999999999999-9999999999999999999999999
Q 000746 328 RFWLGGLFKIGNDLSQFVGPVLLNHLLQSMQRGDPA-W---IGYIYAFLIFVGV-SFGVLTEAQYFQNVWRVGFRLRSTL 402 (1303)
Q Consensus 328 ~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~-~---~~~~~a~~l~~~~-~~~~~~~~~~~~~~~r~~~~ir~~l 402 (1303)
.++.+.++.++..++....|+++..+++......+. . ....+.. ++++. ++..+......+...+.+.++...+
T Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~l 784 (1284)
T 3g5u_A 706 YFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSL-LFLILGIISFITFFLQGFTFGKAGEILTKRL 784 (1284)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999998556850336779999999-9999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999749911016--999689999999999999999999-999998999999999999999979999999999999
Q 000746 403 VAAIFRKTLRLTHEARK--GFPSGKVTNMITTDANALQQISQQ-LHGLWSAPFRITLSMVLLYQQLGVASLLGSLMLVLM 479 (1303)
Q Consensus 403 ~~~i~~k~l~l~~~~~~--~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~pl~i~~~~~ll~~~lg~~~l~~~~v~~i~ 479 (1303)
+..+|++.++.+....+ +.++|+++|++++|++.+...... +..+....+.++.++.++...-...+++.++++.++
T Consensus 785 r~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~ 864 (1284)
T 3g5u_A 785 RYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPII 864 (1284)
T ss_dssp HHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999839988875789988999999999999999999999999999999999999999999699999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999964899998224899999999999999999999999999999999889
Q 000746 480 VPLQTFIISKMRKLTKEGLQWTDRRVSLTNEILAAMDTVKCYAWEKSFQSRVQSIRDDELSWFRKAQFLSAFNSFILNSI 559 (1303)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~r~~E~~~~~~~~~~~~~~~~~~~~~ 559 (1303)
+....+..+...+...+..+..++..+...|.++|+++||.+++|+.+.+++.+..+...+...+..........+....
T Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 944 (1284)
T 3g5u_A 865 AIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAM 944 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999988999998465999999999999999999999999999999999999
Q ss_pred HH--HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCC
Q ss_conf 68--8677653565460798898899999999999999999999999999999999999999999886211999---999
Q 000746 560 PV--VVTVVSFGTFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNLLSQVVNANVSLQRLEELLLAEERILMPN---PPL 634 (1303)
Q Consensus 560 ~~--~~~~~~f~~~~~~~~~l~~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~~~~s~~Ri~~fL~~~~~~~~~~---~~~ 634 (1303)
.. .+..+.++.+.+..+.++.+.++..+.++.....|+..+....+.+.++..+.+|+.++++.++...... .+.
T Consensus 945 ~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~ 1024 (1284)
T 3g5u_A 945 MYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKP 1024 (1284)
T ss_dssp HHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSSCCCT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99999999999999999098069999999999999999999999999999999999999999983887666655566545
Q ss_pred CCCCCCEEEEEEEEEECCC--CCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEE-----------
Q ss_conf 9999928999338972899--985300565724996999994999986789999846999999966999-----------
Q 000746 635 EPELPAVSIKNGNFSWDSK--SPTLSNINLDIPVGSLVAIVGGTGEGKTSLVSAMLGELPPLKDASVVI----------- 701 (1303)
Q Consensus 635 ~~~~~~i~~~~~~f~~~~~--~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llge~~~~~g~~~~~----------- 701 (1303)
.+....++++|++|+|+.+ .++|+|+||++++||+++|+||+|||||||+++|.|.++|.+| .+.+
T Consensus 1025 ~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G-~I~i~g~~i~~~~~~ 1103 (1284)
T 3g5u_A 1025 NMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAG-SVFLDGKEIKQLNVQ 1103 (1284)
T ss_dssp TTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSSSTTHHHHHHHHTTSSCCSEE-EEESSSSCTTSSCHH
T ss_pred CCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC-EEEECCEECCCCCHH
T ss_conf 6777857999989977999987002030599769988999889999789999999468678997-798999980007899
Q ss_pred --CCEEEEECCCCCCCCCCHHHHHCCCCC---CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf --491799816865666558899704999---995658999989823888510999997311489887766899999999
Q 000746 702 --RGTVAYVPQISWIFNATLRKNILFGSE---FDPAKYWKTVDVSALQHDLDLLPDRDLTEIGERGVNISGGQKQRVSMA 776 (1303)
Q Consensus 702 --~~~iayv~Q~pwl~~~TireNI~~g~~---~d~~~y~~vi~ac~L~~di~~lp~gd~T~ige~G~~LSGGQkqRiaLA 776 (1303)
+.+++|++|+|.+|++||+|||.+|.+ .++++..++++.+.+.+.++.+|+|++|.+||+|.+||||||||++||
T Consensus 1104 ~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iA 1183 (1284)
T 3g5u_A 1104 WLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIA 1183 (1284)
T ss_dssp HHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHH
T ss_pred HHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99702689877874066669999746687789999999999998395999972704245611788893389999999999
Q ss_pred HHHHH-----------------------HHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHHHCCHHH
Q ss_conf 99998-----------------------9986750998799992499940014979999398799943978897334599
Q 000746 777 RAVFN-----------------------SCIKEELRGKTRILVTNQLHFLPHVDRIILVSEGMIKEEGSFEELSKHGRLF 833 (1303)
Q Consensus 777 RAi~~-----------------------~~i~~~l~~~TvilvTH~~~~l~~aD~ii~l~~G~i~~~G~~~~l~~~~~~~ 833 (1303)
||++. +.+....+++|+|+|||+++.+..||+|++|++|+++++|+++++.++++.|
T Consensus 1184 Ral~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~~~g~y 1263 (1284)
T 3g5u_A 1184 RALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQKGIY 1263 (1284)
T ss_dssp HHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSCEEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHHSCSHH
T ss_pred HHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCCCHH
T ss_conf 99974999999868755579999999999999867999899995587999809989999899899977899998477779
Q ss_pred HHHHHHH
Q ss_conf 9999970
Q 000746 834 QKLMENA 840 (1303)
Q Consensus 834 ~~~~~~~ 840 (1303)
.++++..
T Consensus 1264 ~~l~~~q 1270 (1284)
T 3g5u_A 1264 FSMVSVQ 1270 (1284)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9999997
Done!