Query 000748
Match_columns 1303
No_of_seqs 256 out of 305
Neff 4.1
Searched_HMMs 29240
Date Tue Mar 26 15:52:52 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000748.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_521-524//hhsearch_pdb/000748hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3biy_A Histone acetyltransfera 1.0 1 1 897.9 27.4 353 702-1105 1-380 (380)
2 3p57_P Histone acetyltransfera 1.0 1 1 204.7 9.0 93 1181-1276 3-95 (112)
3 3t92_A Histone acetyltransfera 1.0 1 1 190.2 10.3 92 1181-1275 4-95 (121)
4 1l3e_B P300 protein; protein-p 1.0 1 1 158.5 -0.3 78 215-292 8-100 (101)
5 3t92_A Histone acetyltransfera 1.0 1 1 109.2 1.9 78 216-295 6-95 (121)
6 1tot_A CREB-binding protein; z 1.0 1 1 93.6 2.3 52 1101-1157 1-52 (52)
7 1l3e_B P300 protein; protein-p 1.0 1 1 90.6 5.5 81 1188-1271 14-99 (101)
8 3p57_P Histone acetyltransfera 1.0 1 1 69.4 2.8 73 221-295 10-94 (112)
9 2dip_A Zinc finger SWIM domain 1.0 1 1 64.7 2.6 45 1106-1153 31-76 (98)
10 2e5r_A Dystrobrevin alpha; ZZ 1.0 1 1 63.0 3.1 45 1107-1152 12-60 (63)
No 1
>3biy_A Histone acetyltransferase P300; P300 HAT, bisubstrate inhibitor, protein-inhibitor complex; HET: 01K; 1.70A {Homo sapiens}
Probab=1.00 E-value=1 Score=897.87 Aligned_cols=353 Identities=41% Similarity=0.706 Sum_probs=294.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHH-CCCCCCC
Q ss_conf 222377997500489999999899999996620169887777888871899996021034523758985320-7999854
Q 000748 702 FFAAKDLPSTMLSDHLEQRLFTRIQEERKMKANVSGKNLDEVPTAEDLVVRVVLSVDKKLKVKQQFLDIFHE-ANYPTEF 780 (1303)
Q Consensus 702 ~~~AkdLP~T~LS~fLE~RLn~~L~~er~~rak~~Gks~dev~~ae~l~IRVVsSvdK~~eVk~~f~~~F~~-~~yp~ef 780 (1303)
+|+|++||+|+||+|||+|||++|++. ..++++.|+||||++++++++|+++|..+|.. ++||++|
T Consensus 1 ~f~a~~Lp~t~LS~~lE~rln~~L~~~-------------~~~~~~~v~IRvvss~~k~~ev~~~~~~~f~~~~~~~~~f 67 (380)
T 3biy_A 1 KFSAKRLPSTRLGTFLENRVNDFLRRQ-------------NHPESGEVTVRVVHASDKTVEVKPGMKARFVDSGEMAESF 67 (380)
T ss_dssp CCCSTTSCCCHHHHHHHHHHHHHHHHH-------------TCTTCCCEEEEEEEEEEEEEECCTTHHHHTTTTTSSCSEE
T ss_pred CCCHHHCCCCHHHHHHHHHHHHHHHHH-------------CCCCCCCEEEEEEEEECCEEECCHHHHHHHCCCCCCCCCC
T ss_conf 988033888737899999999999862-------------5565575579999742230121611787613213577345
Q ss_pred CCEEEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 64057999999868867999999965138999999961699983455444466521223332025899999999999998
Q 000748 781 PYRLKVILLFQKIEGVDVCLFGMYVQEFGSECSHPNQRCVYISYLDSVKYFRPETETAAGKTLRTFVYHEILIGYLEYSK 860 (1303)
Q Consensus 781 pYrsKaI~vFQkIDGVDVlfF~MyVQEYgs~c~~PN~r~VyIsYLDSV~YFrP~~~~~sGe~lRT~VYhEILisYldYak 860 (1303)
|||+|+|+|||+|||||||||+|||||||++|+.||+|||||+|||||+||+|+ .+||+||||||||||+||+
T Consensus 68 ~YrsK~I~vFQ~idgvDV~fF~m~vqEy~~~c~~pn~r~vyI~YLDSV~yf~p~-------~~Rt~vY~eill~Yl~y~k 140 (380)
T 3biy_A 68 PYRTKALFAFEEIDGVDLCFFGMHVQEYGSDCPPPNQRRVYISYLDSVHFFRPK-------CLRTAVYHEILIGYLEYVK 140 (380)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEECTTSCTTSTTEEEEEEEEECSCCSSG-------GGHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCC-------HHHHHHHHHHHHHHHHHHH
T ss_conf 513679999997589379999999471155678988726999871442235730-------2678999999999999998
Q ss_pred HCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 52974889982799999971460699999999904799999999999986071732111121103677998768857568
Q 000748 861 KRGFATCYIWACPPVKGEDYILYCHPEMQKTPKSDKLRQWYRSMLRKAAEEKIVVGISNLYDQFFIPTGQHSKVTAARLP 940 (1303)
Q Consensus 861 ~~GF~~aHIWAcPP~kGDDYIF~cHP~~Qk~pk~~rL~~WY~~mL~kgk~eGIV~~~~n~yd~~f~~~~e~~k~~a~~LP 940 (1303)
++||++||||||||.+||||||||||++|++|++++|++||++||++|+++|||.+|+|+|++... ....+|++||
T Consensus 141 ~~Gf~~~hiWAcPP~~GDDYIF~~HP~~Qk~p~~~rL~~WY~~mL~kg~~~giv~~~~~~~~~~~~----~~~~~~~~lP 216 (380)
T 3biy_A 141 KLGYTTGHIWACPPSEGDDYIFHCHPPDQKIPKPKRLQEWYKKMLDKAVSERIVHDYKDIFKQATE----DRLTSAKELP 216 (380)
T ss_dssp HHTCCEEEEECCCCCTTCCSSSSSCCTTCCCCCHHHHHHHHHHHHHHHHHTTSCCEEEEHHHHHHH----HTCCCGGGSC
T ss_pred HCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCC----CCCCCHHHCC
T ss_conf 379736888706998998458840741067888079999999999989875935405668653145----5558875588
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCC-CCHHH---------------HCCCHHHHHHHHHCCCCC-------CCCCHHHHHHH
Q ss_conf 43599820899999999996308-40122---------------001023499886419999-------99603355686
Q 000748 941 YFDGDYWSGAAEGVIKSIEQERG-DDFHK---------------KLKKPMTKRMLKAMGHAD-------PSSNAAKDILF 997 (1303)
Q Consensus 941 YFeGd~Wp~~~Eeiikel~qE~g-~k~~k---------------~~KK~~~kr~~Ka~g~~~-------~s~~~skd~~l 997 (1303)
||+|||||++||++|++|++|++ ++..+ +.||+..+++.++.+... ...+.+. .+
T Consensus 217 yF~gd~W~~~~e~~i~el~~e~~~rk~~~~~~~~~~~~~~~~~k~~kkk~~kk~~~~k~~~~~~~~k~~~~~~~~~--~l 294 (380)
T 3biy_A 217 YFEGDFWPNVLEESIKELEQEEEERKREENTSNESTDVTKGDSKNAKKKNNKKTSKNKSSLSRGNKKKPGMPNVSN--DL 294 (380)
T ss_dssp CCTTCHHHHHHHHHHCC---------------------------------------------------------------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCH--HH
T ss_conf 4178756799999999998877764310012222244545404665530144443343202232001468876424--89
Q ss_pred HHHCCCCCCC---CCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 7520011233---1100011101355204977655446543333442000488988888986433323437299999986
Q 000748 998 MQKDDQRTQF---LFFLSCCRCHDAERNLNGEDIHTLNGKEKHALNKVMVDDVPCHTRDKDVIIDNTSFENRNAFLSFCQ 1074 (1303)
Q Consensus 998 m~KLg~~lq~---knF~ic~~c~~~e~~l~~~~~hp~~~ke~~~l~~v~i~~~p~~t~D~D~~i~selfdtR~aFL~lCq 1074 (1303)
|+||+++++. .+|.+-. . . ......+| .|.|+|++|+|+|||+|++||++||
T Consensus 295 ~~kl~~~~~~~ke~ff~i~L---------~-------~--------~~~~~~lp-~~~D~D~~~~~e~~d~R~~FL~~c~ 349 (380)
T 3biy_A 295 SQKLYATMEKHKEVFFVIRL---------I-------A--------GPAANSLP-PIVDPDPLIPCDLMDGRDAFLTLAR 349 (380)
T ss_dssp CHHHHHHHHHTGGGEEEEES---------S-------C--------GGGGTSCC-CCCCCSCCBCCGGGSSSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEE---------C-------C--------CCCCCCCC-CCCCCCCCEECCCCCCHHHHHHHHH
T ss_conf 99999998730453399995---------4-------7--------76556789-9899875420420068999999999
Q ss_pred HCCCCCCHHHHHHCHHHHHHHHHCCCCCCCC
Q ss_conf 4577655235521023799887203555643
Q 000748 1075 KNYYQFDTLRRAKYSSMMILHHLHNSSMLTA 1105 (1303)
Q Consensus 1075 ~nHyQFdsLRRAK~SSMmiLyhLHNp~~~~f 1105 (1303)
+|||||||||||||||||||||||||++|+|
T Consensus 350 ~~h~qF~tLRRAK~SSm~~L~~Lhn~~~~~~ 380 (380)
T 3biy_A 350 DRHLEFSSLRRAQWSTGCMLVELHTQSQDRF 380 (380)
T ss_dssp HTTCCCSSHHHHHHHHHHHHHHHHHHHCCC-
T ss_pred HHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 8387757156777769999999648888989
No 2
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3io2_A
Probab=1.00 E-value=1 Score=204.68 Aligned_cols=93 Identities=31% Similarity=0.669 Sum_probs=89.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 20021779999999998886028889998989122297999999852125446788930399999999996118979999
Q 000748 1181 HSQVNLTLQKTQLMNLLQHASQCSLTKSKGCSYPKCLQMKTLFYHARSCNVRTAGGCQHCRKIWLLLTMHSRRCKELDCR 1260 (1303)
Q Consensus 1181 ~~qes~~~qLqr~me~LvHA~~C~~~~~a~C~~p~C~kMK~Li~H~~~Ck~R~~gGC~~CKrlw~Ll~lHAk~C~e~~C~ 1260 (1303)
+++|+++++|+++|++|+||++|+ +++|++|+|.+||+||+|+++|++|++|||++|++||+|++|||++|++++|+
T Consensus 3 ~~~~~r~~~iq~~l~~L~HA~~C~---~~~C~~~~C~~mK~ll~H~~~C~~r~~~gC~~Ck~~~~Ll~~HAk~C~~~~C~ 79 (112)
T 3p57_P 3 SPGDSRRLSIQRCIQSLVHACQCR---NANCSLPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALCCYHAKHCQENKCP 79 (112)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCC---CTTCCCTTHHHHHHHHTCTTCC-------CCCHHHHHHHHHHHHTTCCSTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 867789999999999999884198---99999705599999999998856879999820099999999999873989999
Q ss_pred CCCCHHHHHHHHHHHH
Q ss_conf 8875458999999644
Q 000748 1261 VPRCKDLKQWNAEAVV 1276 (1303)
Q Consensus 1261 VP~C~~lK~~~~e~~~ 1276 (1303)
||+|++||++++++.+
T Consensus 80 VP~C~~iK~~~~q~q~ 95 (112)
T 3p57_P 80 VPFCLNIKQKLRQQQL 95 (112)
T ss_dssp STTHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
T ss_conf 9867899999999988
No 3
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A
Probab=1.00 E-value=1 Score=190.23 Aligned_cols=92 Identities=32% Similarity=0.680 Sum_probs=87.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 20021779999999998886028889998989122297999999852125446788930399999999996118979999
Q 000748 1181 HSQVNLTLQKTQLMNLLQHASQCSLTKSKGCSYPKCLQMKTLFYHARSCNVRTAGGCQHCRKIWLLLTMHSRRCKELDCR 1260 (1303)
Q Consensus 1181 ~~qes~~~qLqr~me~LvHA~~C~~~~~a~C~~p~C~kMK~Li~H~~~Ck~R~~gGC~~CKrlw~Ll~lHAk~C~e~~C~ 1260 (1303)
+++|+++++|+++|++|+||+.|+ +++|.+|+|.+||.||+|+..|+.|..|||++|+++|+||.+||++|++.+|+
T Consensus 4 ~~~e~R~~~iq~~l~~L~HA~~C~---~~~C~~p~C~~mK~ll~H~~~C~~r~~~~c~~C~~~~~Ll~~Hak~C~~~~C~ 80 (121)
T 3t92_A 4 SPGDSRRLSIQRAIQSLVHAAQCR---NANCSLPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALAAYHAKHCQENKCP 80 (121)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHCC---CTTCCCHHHHHHHHHHHHHHHCSSTTTTTCHHHHHHHHHHHHHHTTCCCTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 569999999999999999774093---78999704389999999999806899999974499999999999767999999
Q ss_pred CCCCHHHHHHHHHHH
Q ss_conf 887545899999964
Q 000748 1261 VPRCKDLKQWNAEAV 1275 (1303)
Q Consensus 1261 VP~C~~lK~~~~e~~ 1275 (1303)
||||++||++++++.
T Consensus 81 VP~C~~iK~~~~~qq 95 (121)
T 3t92_A 81 VPFCLNIKQKLRQQQ 95 (121)
T ss_dssp STTHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
T ss_conf 986588999999999
No 4
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A
Probab=1.00 E-value=1 Score=158.53 Aligned_cols=78 Identities=21% Similarity=0.420 Sum_probs=69.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCC------CCCCCCCCC-----CCCCCCCCC-CCC---CCCCHHHHHHHCCCCCCC
Q ss_conf 99502343343878765144224688------998775324-----102434568-864---444303444200157999
Q 000748 215 SNPSCLYLENRILHAYINYKSSMVAN------GGSIVSFVN-----YLHSTICNI-HWC---GCERFCILLSHFDGCHSA 279 (1303)
Q Consensus 215 ~~~~~~~~qqrwLl~L~HA~~C~~p~------g~C~~~~C~-----~~Hm~~C~~-~~C---~C~ssR~llsH~k~C~~~ 279 (1303)
+++......|++|+||+||++|+.++ +.|.+|+|. |+||+.|+. ..| ||.+||+||+||++|++.
T Consensus 8 ~dp~~~k~iqqqL~lL~HA~kC~~~e~~~g~~~~C~lp~C~~mK~ll~Hm~~C~~g~~C~~~~C~sSr~ii~H~k~C~~~ 87 (101)
T 1l3e_B 8 ADPEKRKLIQQQLVLLLHAHKCQRREQANGEVRQCNLPHCRTMKNVLNHMTHCQSGKSCQVAHCASSRQIISHWKNCTRH 87 (101)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHHHHHTTTSSCCCCSCHHHHHHHHHHHHHTTCCSCSSSSCHHHHHHHHHHHHHHHCCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 99799999999999999998848820268868888997638999999999876388999999888799999999868999
Q ss_pred CCCCCHHHHHHHH
Q ss_conf 9854145321277
Q 000748 280 ECHICGPVRYASD 292 (1303)
Q Consensus 280 ~CpVC~PVR~~~~ 292 (1303)
+||||+|||+++.
T Consensus 88 ~CpVC~pvk~~~~ 100 (101)
T 1l3e_B 88 DCPVCLPLKNAGD 100 (101)
T ss_dssp CCTTHHHHHCCSC
T ss_pred CCCCCHHHHHHHH
T ss_conf 9986788996430
No 5
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A
Probab=1.00 E-value=1 Score=109.16 Aligned_cols=78 Identities=15% Similarity=0.295 Sum_probs=68.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC-----CCCCCCCCCC---CC-CCCCHHHHH-HHCCCCCCCCCCC--
Q ss_conf 9502343343878765144224688998775324-----1024345688---64-444303444-2001579999854--
Q 000748 216 NPSCLYLENRILHAYINYKSSMVANGGSIVSFVN-----YLHSTICNIH---WC-GCERFCILL-SHFDGCHSAECHI-- 283 (1303)
Q Consensus 216 ~~~~~~~qqrwLl~L~HA~~C~~p~g~C~~~~C~-----~~Hm~~C~~~---~C-~C~ssR~ll-sH~k~C~~~~CpV-- 283 (1303)
++......||||.+|+||.+|..+ .|.+|+|. |.||..|+.+ .| +|.++++|| .||++|.+.+|||
T Consensus 6 ~e~R~~~iq~~l~~L~HA~~C~~~--~C~~p~C~~mK~ll~H~~~C~~r~~~~c~~C~~~~~Ll~~Hak~C~~~~C~VP~ 83 (121)
T 3t92_A 6 GDSRRLSIQRAIQSLVHAAQCRNA--NCSLPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALAAYHAKHCQENKCPVPF 83 (121)
T ss_dssp -CHHHHHHHHHHHHHHHHHHCCCT--TCCCHHHHHHHHHHHHHHHCSSTTTTTCHHHHHHHHHHHHHHTTCCCTTCCSTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 999999999999999977409378--999704389999999999806899999974499999999999767999999986
Q ss_pred CHHHHHHHHHHC
Q ss_conf 145321277610
Q 000748 284 CGPVRYASDAAN 295 (1303)
Q Consensus 284 C~PVR~~~~~~~ 295 (1303)
|.|+|.++.+++
T Consensus 84 C~~iK~~~~~qq 95 (121)
T 3t92_A 84 CLNIKQKLRQQQ 95 (121)
T ss_dssp HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
T ss_conf 588999999999
No 6
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=1.00 E-value=1 Score=93.58 Aligned_cols=52 Identities=25% Similarity=0.728 Sum_probs=46.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 556433103333247544874223888987323254510488655555544656678
Q 000748 1101 SMLTAESICCLCRKDTVIDQCWQCETCPQFEVCTACYQEKGNSLHIHKLTQRSSAVD 1157 (1303)
Q Consensus 1101 ~~~~fv~tCn~C~~~iet~~~whC~vC~DfDLC~~CY~k~G~~~H~Hkl~~~~~~~d 1157 (1303)
++++|.++|+.|+.+| +.||||.+|+|||||..||.+. .|+|+|.+++..+|
T Consensus 1 ~~~~~~~~Cd~C~~~i--g~R~~C~~C~dyDLC~~C~~~~---~H~H~m~~~~~~l~ 52 (52)
T 1tot_A 1 GQDRFVYTCNECKHHV--ETRWHCTVCEDYDLCINCYNTK---SHTHKMVKWGLGLD 52 (52)
T ss_dssp CBCSSCEEETTTTEEE--SSEEEESSSSSCEECHHHHHHH---CCCSSEEEECSSCC
T ss_pred CCCCCEEECCCCCCCC--CCEEECCCCCCCHHHHHHHHCC---CCCCCEEEECCCCC
T ss_conf 9983788998988988--4547848999853499998379---98886488368889
No 7
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A
Probab=1.00 E-value=1 Score=90.58 Aligned_cols=81 Identities=28% Similarity=0.580 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHCCCCC-----CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 9999999998886028889-----99898912229799999985212544678893039999999999611897999988
Q 000748 1188 LQKTQLMNLLQHASQCSLT-----KSKGCSYPKCLQMKTLFYHARSCNVRTAGGCQHCRKIWLLLTMHSRRCKELDCRVP 1262 (1303)
Q Consensus 1188 ~qLqr~me~LvHA~~C~~~-----~~a~C~~p~C~kMK~Li~H~~~Ck~R~~gGC~~CKrlw~Ll~lHAk~C~e~~C~VP 1262 (1303)
..|++.+.+|.||..|... ..+.|.+|.|..||.|+.|+..|+.......++|...++|+ .|.++|++.+|+|
T Consensus 14 k~iqqqL~lL~HA~kC~~~e~~~g~~~~C~lp~C~~mK~ll~Hm~~C~~g~~C~~~~C~sSr~ii-~H~k~C~~~~CpV- 91 (101)
T 1l3e_B 14 KLIQQQLVLLLHAHKCQRREQANGEVRQCNLPHCRTMKNVLNHMTHCQSGKSCQVAHCASSRQII-SHWKNCTRHDCPV- 91 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSSCCCCSCHHHHHHHHHHHHHTTCCSCSSSSCHHHHHHHHHH-HHHHHCCSSCCTT-
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH-HHHHHCCCCCCCC-
T ss_conf 99999999999998848820268868888997638999999999876388999999888799999-9998689999986-
Q ss_pred CCHHHHHHH
Q ss_conf 754589999
Q 000748 1263 RCKDLKQWN 1271 (1303)
Q Consensus 1263 ~C~~lK~~~ 1271 (1303)
|..+|+++
T Consensus 92 -C~pvk~~~ 99 (101)
T 1l3e_B 92 -CLPLKNAG 99 (101)
T ss_dssp -HHHHHCCS
T ss_pred -CHHHHHHH
T ss_conf -78899643
No 8
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3io2_A
Probab=1.00 E-value=1 Score=69.37 Aligned_cols=73 Identities=14% Similarity=0.304 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCC-----CCCCCCCCCC---CC-CCCCHHHH-HHHCCCCCCCCCCC--CHHHH
Q ss_conf 43343878765144224688998775324-----1024345688---64-44430344-42001579999854--14532
Q 000748 221 YLENRILHAYINYKSSMVANGGSIVSFVN-----YLHSTICNIH---WC-GCERFCIL-LSHFDGCHSAECHI--CGPVR 288 (1303)
Q Consensus 221 ~~qqrwLl~L~HA~~C~~p~g~C~~~~C~-----~~Hm~~C~~~---~C-~C~ssR~l-lsH~k~C~~~~CpV--C~PVR 288 (1303)
..-|++|.+|.||..|.. +.|..++|. +.|+..|+.+ .| +|.....| ..|+++|.+.+|+| |.++|
T Consensus 10 ~~iq~~l~~L~HA~~C~~--~~C~~~~C~~mK~ll~H~~~C~~r~~~gC~~Ck~~~~Ll~~HAk~C~~~~C~VP~C~~iK 87 (112)
T 3p57_P 10 LSIQRCIQSLVHACQCRN--ANCSLPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALCCYHAKHCQENKCPVPFCLNIK 87 (112)
T ss_dssp HHHHHHHHHHHHHHHCCC--TTCCCTTHHHHHHHHTCTTCC-------CCCHHHHHHHHHHHHTTCCSTTCCSTTHHHHH
T ss_pred HHHHHHHHHHHHHCCCCC--CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH
T ss_conf 999999999998841989--999970559999999999885687999982009999999999987398999998678999
Q ss_pred HHHHHHC
Q ss_conf 1277610
Q 000748 289 YASDAAN 295 (1303)
Q Consensus 289 ~~~~~~~ 295 (1303)
..+.+.+
T Consensus 88 ~~~~q~q 94 (112)
T 3p57_P 88 QKLRQQQ 94 (112)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9999998
No 9
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=1.00 E-value=1 Score=64.69 Aligned_cols=45 Identities=24% Similarity=0.755 Sum_probs=37.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC-CCCCCCCC
Q ss_conf 3103333247544874223888987323254510488655-55554465
Q 000748 1106 ESICCLCRKDTVIDQCWQCETCPQFEVCTACYQEKGNSLH-IHKLTQRS 1153 (1303)
Q Consensus 1106 v~tCn~C~~~iet~~~whC~vC~DfDLC~~CY~k~G~~~H-~Hkl~~~~ 1153 (1303)
.++|+.|...-..|.||+|.+|+|||||..||.+ | .| .|.|..+.
T Consensus 31 gv~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~~-~--~H~~H~f~~i~ 76 (98)
T 2dip_A 31 GIPCNNCKQFPIEGKCYKCTECIEYHLCQECFDS-Y--CHLSHTFTFRE 76 (98)
T ss_dssp CCCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHT-T--SGGGSCEEECC
T ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHCC-C--CCCCCCEEEEC
T ss_conf 8798698888730675788879993078897746-9--87889816816
No 10
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=63.00 Aligned_cols=45 Identities=20% Similarity=0.806 Sum_probs=35.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC--CC--CCCCCCC
Q ss_conf 1033332475448742238889873232545104886--55--5555446
Q 000748 1107 SICCLCRKDTVIDQCWQCETCPQFEVCTACYQEKGNS--LH--IHKLTQR 1152 (1303)
Q Consensus 1107 ~tCn~C~~~iet~~~whC~vC~DfDLC~~CY~k~G~~--~H--~Hkl~~~ 1152 (1303)
.+|+.|......|.||+|.+|+|||||..||.+ |.. .| .|+|...
T Consensus 12 ~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C~~~-g~~~~~H~~~H~~~~~ 60 (63)
T 2e5r_A 12 VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWR-GHAGGSHSNQHQMKEY 60 (63)
T ss_dssp SCCSSSCCCSSCSCEEEESSCSSCEECHHHHHH-CCCCSSSCTTCCEEEE
T ss_pred CCCCCCCCCCEECCEEEECCCCCCHHHHHHHHC-CCCCCCCCCCCCEEEE
T ss_conf 899299886263523883679984147888868-7767999998788998
Done!