Query 000750
Match_columns 1303
No_of_seqs 354 out of 4903
Neff 8.4
Searched_HMMs 29240
Date Tue Mar 26 16:51:56 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000750.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_521-524//hhsearch_pdb/000750hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1709.3 126.7 1180 28-1296 134-1320(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1498.6 117.0 1163 30-1297 108-1275(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 857.6 77.2 580 712-1294 58-655 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 778.2 62.7 578 714-1294 33-627 (1284)
5 3qf4_A ABC transporter, ATP-bi 1.0 1 1 729.4 73.7 568 720-1296 15-582 (587)
6 3qf4_B Uncharacterized ABC tra 1.0 1 1 727.1 64.6 571 715-1296 24-594 (598)
7 4a82_A Cystic fibrosis transme 1.0 1 1 721.3 68.8 572 717-1293 3-577 (578)
8 2yl4_A ATP-binding cassette SU 1.0 1 1 705.3 75.2 575 718-1297 9-588 (595)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 701.7 77.6 568 716-1294 13-581 (582)
10 3b60_A Lipid A export ATP-bind 1.0 1 1 700.5 74.8 568 716-1294 13-581 (582)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1709.27 Aligned_cols=1180 Identities=31% Similarity=0.514 Sum_probs=996.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999998099446810489225999999559999999999
Q 000750 28 WLSELALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSE 107 (1303)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~g~l~sr~~~Dv~~i~~~~~~ 107 (1303)
.+..+++++++++++.+++.|++.+||.++++|+..++|.++|+|++++|++|||++ ++|++++|+++|++.+++++..
T Consensus 134 ~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~-~~G~l~sr~~~D~~~i~~~~~~ 212 (1321)
T 4f4c_A 134 DVMNVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTN-HSGTLATKLFDNLERVKEGTGD 212 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHT-CCTTHHHHHHHHHHHHHHTSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999999999978898998799-8489999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999989999999999999884999999999999999999999999999999999999999999999981189999851
Q 000750 108 KVGNYIHNMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFT 187 (1303)
Q Consensus 108 ~~~~~~~~~~~~~~~~v~~~~~~~~l~~v~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~ 187 (1303)
.++.++..+.++++.++++|+++|.+++++++..|+++++..++.+...+..++.++..++..+.+.|.++|+++||+|+
T Consensus 213 ~l~~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~ 292 (1321)
T 4f4c_A 213 KIGMAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLN 292 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999999998999999999999999999999999999999999999999999999998399999821
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 16999999999999999999999999988899999999999999999999999807766777999999999999999999
Q 000750 188 NETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQA 267 (1303)
Q Consensus 188 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~ 267 (1303)
+|+.+.++|.+..++..+...+.....++..+...++.++.+++++|+|.+++..|.++.|.+++++.++..+..|+..+
T Consensus 293 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~ 372 (1321)
T 4f4c_A 293 GLRYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLA 372 (1321)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 42999999999999999999999999999999999999999999999999999959986999999999999999999989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECC
Q ss_conf 9999999999999999999724698888889--99999877648999899984999999851211388509978999879
Q 000750 268 ATNFYSFDQGRIAAYRLYEMISRSSSTTNYD--GNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGR 345 (1303)
Q Consensus 268 ~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~--~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~ 345 (1303)
...+..+.++.++++|++++++.+++..+.. +....+..++|+|+||+|+||++++.++|+|+||++++|++++|||+
T Consensus 373 ~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~ 452 (1321)
T 4f4c_A 373 GPQLAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGS 452 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEEC
T ss_conf 99999999999999999999717853456665565677888767999855407999987433331886228827899805
Q ss_pred CCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEEECCCCCCCHHHHHHHHCCC-CCCHHHHHHHHHHHC
Q ss_conf 9992889999994048999858998995069989888742418891456455274999985199-999999999999813
Q 000750 346 NGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAH 424 (1303)
Q Consensus 346 sGsGKSTl~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~ 424 (1303)
||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||+|+||||++||+|||++|+ +++++++++||+.|+
T Consensus 453 sGsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~ 532 (1321)
T 4f4c_A 453 SGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMAN 532 (1321)
T ss_dssp SSSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf 89857788887545651644861579965011259998504666587533207861678864155220999999998756
Q ss_pred CHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 13779731024475235799989948999999987520499889983899999989899999999986199749998128
Q 000750 425 AHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARR 504 (1303)
Q Consensus 425 l~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDepts~lD~~~~~~~~~~l~~~~~~~t~i~ith~ 504 (1303)
+++||+.||+||+|.|||+|.+||||||||||||||+|++|+|||||||||+||+++|+.++++++++.+++|+|+||||
T Consensus 533 l~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHr 612 (1321)
T 4f4c_A 533 AEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHR 612 (1321)
T ss_dssp CHHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSC
T ss_pred CHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 54688708888860755898877777879999999872599989984554468878999999999998479889997363
Q ss_pred CCCCCCCCEEEEEECCEEEECCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 74101467899984964841059378952491689999978740078888766756554000023766777888999965
Q 000750 505 LSLIRNADYIAVMDEGRLFEMGTHDELLATGDLYAELLKCEEAAKLPRRMPVRNYKETSTFQIEKDSSASHSFQEPSSPK 584 (1303)
Q Consensus 505 ~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (1303)
+++++.||+|++|++|+|+++|+|+||++.++.|++++..|...+...... +..............
T Consensus 613 ls~i~~aD~Iivl~~G~ive~Gth~eL~~~~g~y~~l~~~q~~~~~~~~~~------------~~~~~~~~~~~~~~~-- 678 (1321)
T 4f4c_A 613 LSTIRNADLIISCKNGQVVEVGDHRALMAQQGLYYDLVTAQTFTDAVDSAA------------EGKFSRENSVARQTS-- 678 (1321)
T ss_dssp TTTTTTCSEEEEEETTEEEEEECHHHHHTTTCHHHHHHHHHHHHHHHHHHH------------CC---------------
T ss_pred HHHHHHCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC------------CCCCCCCCCCCCCCC--
T ss_conf 878986898999639965136899999985327999999622122223323------------344332232111222--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 67897422246668999988888998889995035431399987457784211123212247889844446666667899
Q 000750 585 MLKSPSLQRVGIYRPTDGAFDSQESPKVLSPPSEKMLENGMPMDAADKEPSIRRQDSFEMRLPELPKIDVHSSNRQTSNG 664 (1303)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (1303)
......... ++..+...+... .
T Consensus 679 -----------------------~~~~~~~~~-------------~~~~~~~~~~~~-------------------~--- 700 (1321)
T 4f4c_A 679 -----------------------EHEGLSRQA-------------SEMDDIMNRVRS-------------------S--- 700 (1321)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------CCCCCCCCC-------------CCCCCHHHHHHC-------------------C---
T ss_conf -----------------------223422222-------------221102211101-------------------3---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999998877799766555565556899999999850124432106862178876654897999999999999989878
Q 000750 665 SDPESPISPLLTSDPKNERSHSQTFSRPHSHSDDFPTKVREEESKHQKAPSFWRLAELSFAEWLYAVLGSIGAAIFGSFN 744 (1303)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~ 744 (1303)
........+..... .+. ...+.......+.+........+++++...++.++.++++.+.+.+.+...
T Consensus 701 ~~~~~~~~~~~~~~--~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~ 768 (1321)
T 4f4c_A 701 TIGSITNGPVIDEK--EER----------IGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIY 768 (1321)
T ss_dssp -----------------CC----------CCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHH
T ss_pred CCCCCCCCCCHHHH--HHH----------CCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 21245677402577--753----------154038999999997078631099999998778999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 79999999999985187502334787999999999999999999999999999999999999999999999809943300
Q 000750 745 PLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFD 824 (1303)
Q Consensus 745 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~ 824 (1303)
|..++++..+++.+.... .........|.+++++++++..++.+++.+++.+.+.++..++|.++|++++++|++|||
T Consensus 769 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd 846 (1321)
T 4f4c_A 769 PTYSVFFTSFMNVFAGNP--ADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFD 846 (1321)
T ss_dssp HHHHHHHHHHHHHTSSCS--STTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTT
T ss_pred HHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC
T ss_conf 999999999998751793--455667899999999999999999999999999999999999999998887349933321
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 14677346999998139999999999899999999999999999999979999999999999999999999999777899
Q 000750 825 EEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRG 904 (1303)
Q Consensus 825 ~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~i~~~~~~~~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~ 904 (1303)
.+++++|++++|+++|++.++..++..+..++..++.++++++++++++|.+++++++.+|++++..+...+.......+
T Consensus 847 ~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~ 926 (1321)
T 4f4c_A 847 SPQNASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVK 926 (1321)
T ss_dssp SGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTT
T ss_pred CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 67888488885025059999999999999999986537777022137868999999998889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999994099999813618999999999999999999999999999999999999999999999969863
Q 000750 905 IQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVR 984 (1303)
Q Consensus 905 ~~~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1303)
......+....+.|.+.|+++||+|+.++++.++|.+..+...+..++.....+..+.+...+..+..+++++++..++.
T Consensus 927 ~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~ 1006 (1321)
T 4f4c_A 927 SASEFADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALII 1006 (1321)
T ss_dssp TSSHHHHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998889889999996279888614148899999999999999999999999999999999999999999987578875
Q ss_pred CCCCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf 3865978899--99999999999978888649999999999999999982299989999989899997662899755898
Q 000750 985 DGYMDLPTAL--KEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFC 1062 (1303)
Q Consensus 985 ~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~ 1062 (1303)
.+..+.+... ..+..+.+....+.........+.+...+..+++++++.+++.+.... ....++..|.|+|+||+|+
T Consensus 1007 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~-~~~~~~~~g~I~f~nVsf~ 1085 (1321)
T 4f4c_A 1007 TDPPTMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLSL-AGEKKKLYGKVIFKNVRFA 1085 (1321)
T ss_dssp SSSCSSCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTTCC-CSBCCCCCCCEEEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCCCCCEEEEEEEEEE
T ss_conf 376542147899999999877889999999999999999999989998607665777667-7878888881899987985
Q ss_pred CCCCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCC
Q ss_conf 79999842011125886389799998279998688999870566698648999996069999787641368883678667
Q 000750 1063 YPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIF 1142 (1303)
Q Consensus 1063 Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTLl~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF 1142 (1303)
||++++.+||+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|+||||||+||
T Consensus 1086 Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF 1165 (1321)
T 4f4c_A 1086 YPERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLF 1165 (1321)
T ss_dssp CTTSCSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCC
T ss_pred CCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEE
T ss_conf 79999882124516998898999998999981999999995686389978999999865499999985459987899732
Q ss_pred CCCHHHHHHCCC--CCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 312899997188--899999999999995169999819998764247888888957999999999970399999984778
Q 000750 1143 STTIRENIIYAR--HNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEAS 1220 (1303)
Q Consensus 1143 ~gTIreNI~~g~--~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSGGQkQRialARAll~~p~ILlLDEaT 1220 (1303)
+|||||||.||. ++++|+++++|++.|+++++|.+||+||||.|||+|.+||||||||||||||++|+|+||||||||
T Consensus 1166 ~gTIreNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaT 1245 (1321)
T 4f4c_A 1166 DCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEAT 1245 (1321)
T ss_dssp SEEHHHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCC
T ss_pred CCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 72399997454999999999999999982984999717678999823889156999999999999997179989996811
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCC
Q ss_conf 9999898999999999834199299998339006740498999969899883395789640716699885552143
Q 000750 1221 SSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQPHYGKG 1296 (1303)
Q Consensus 1221 SaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~~g~y~~l~~~q~~~~ 1296 (1303)
|+||++||+.|+++|++.+. +||+|+||||++|+++||+|+||++|+|+|+|+|+||++++|.|++||+.|+.|.
T Consensus 1246 SaLD~~tE~~Iq~~l~~~~~-~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~~g~y~~L~~~Q~~e~ 1320 (1321)
T 4f4c_A 1246 SALDTESEKVVQEALDRARE-GRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSEKGAYYKLTQKQMTEK 1320 (1321)
T ss_dssp CSTTSHHHHHHHHHHTTTSS-SSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHCC--------------
T ss_pred CCCCHHHHHHHHHHHHHHCC-CCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCC
T ss_conf 15789999999999999739-9989996068999996999999989899998888999849809999999998505
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1498.57 Aligned_cols=1163 Identities=36% Similarity=0.622 Sum_probs=992.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999809944681048922599999955999999999999
Q 000750 30 SELALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKV 109 (1303)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~g~l~sr~~~Dv~~i~~~~~~~~ 109 (1303)
..+++++++++++.+++.+++.+++...+.++..++|.++|++++++|+.||+++ ++|++++|+++|++.+++.+...+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~-~~G~l~sr~~~D~~~i~~~~~~~~ 186 (1284)
T 3g5u_A 108 TTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVH-DVGELNTRLTDDVSKINEGIGDKI 186 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSC-CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999999986998997568-877899999988999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
Q ss_conf 99998999999999999988499999999999999999999999999999999999999999999998118999985116
Q 000750 110 GNYIHNMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNE 189 (1303)
Q Consensus 110 ~~~~~~~~~~~~~~v~~~~~~~~l~~v~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e 189 (1303)
..++..++++++.+++++.++|.+++++++..|+++++..++.+...+..++.++..++..+.+.|.++|+++||+|++|
T Consensus 187 ~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e 266 (1284)
T 3g5u_A 187 GMFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQ 266 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCH
T ss_conf 99999999999999999999899999999999999999999999999999999999999999999999787999984653
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999998889999999999999999999999980776677799999999999999999999
Q 000750 190 TLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAAT 269 (1303)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 269 (1303)
+.+.++|.+..++..+...+.....++..++..++.++.+++++|+|++++..|.++.|.+++++++......++.++..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~ 346 (1284)
T 3g5u_A 267 KKELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASP 346 (1284)
T ss_dssp CSHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999992998899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCC
Q ss_conf 999999999999999997246988888--899999987764899989998499999985121138850997899987999
Q 000750 270 NFYSFDQGRIAAYRLYEMISRSSSTTN--YDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNG 347 (1303)
Q Consensus 270 ~~~~~~~~~~a~~ri~~~l~~~~~~~~--~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sG 347 (1303)
.+..+.++..++.|++++++.+++..+ ..+...++..+.|+++||+|+|+++++.++|+|+||++++||+++|||+||
T Consensus 347 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sG 426 (1284)
T 3g5u_A 347 NIEAFANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSG 426 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCC
T ss_conf 99999999999999999972898677666567777777771899998997699998710125458975998899989999
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEEECCCCCCCHHHHHHHHCCC-CCCHHHHHHHHHHHCCH
Q ss_conf 92889999994048999858998995069989888742418891456455274999985199-99999999999981313
Q 000750 348 SGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAH 426 (1303)
Q Consensus 348 sGKSTl~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~l~ 426 (1303)
||||||+++|.|+|+|++|+|.+||+|+++++..++|++|+||+|+|++|++||+|||.+|. +.++++++++++.++++
T Consensus 427 sGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~ 506 (1284)
T 3g5u_A 427 CGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAY 506 (1284)
T ss_dssp SSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCH
T ss_conf 97999999980788999738999999877579999986548986887537766999974579899999999999982969
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf 77973102447523579998994899999998752049988998389999998989999999998619974999812874
Q 000750 427 TFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLS 506 (1303)
Q Consensus 427 ~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDepts~lD~~~~~~~~~~l~~~~~~~t~i~ith~~~ 506 (1303)
++++.+|+|++|.+|++|.+||||||||++||||++++|+|||||||||+||+++++.+++.++...+|+|+|+||||++
T Consensus 507 ~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~ 586 (1284)
T 3g5u_A 507 DFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLS 586 (1284)
T ss_dssp HHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHH
T ss_conf 99974656334501478786599999999999999529998999798777799999999999999739998999940778
Q ss_pred CCCCCCEEEEEECCEEEECCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10146789998496484105937895249168999997874007888876675655400002376677788899996567
Q 000750 507 LIRNADYIAVMDEGRLFEMGTHDELLATGDLYAELLKCEEAAKLPRRMPVRNYKETSTFQIEKDSSASHSFQEPSSPKML 586 (1303)
Q Consensus 507 ~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (1303)
++..||+|++|++|++++.|+|+++++.++.|.+++..+.......... + .. .. ..+....
T Consensus 587 ~i~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~-~~-------~~------~~~~~~~--- 647 (1284)
T 3g5u_A 587 TVRNADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTAGNEIELGN--E-AC-------KS------KDEIDNL--- 647 (1284)
T ss_dssp HHTTCSEEEECSSSCCCCEECHHHHHHTTSHHHHHHHHTC----------------------------------------
T ss_pred HHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCC--C-CC-------CC------CCCCCCC---
T ss_conf 9974998999989999997889999867877999999743002211133--3-33-------32------2222344---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89742224666899998888899888999503543139998745778421112321224788984444666666789999
Q 000750 587 KSPSLQRVGIYRPTDGAFDSQESPKVLSPPSEKMLENGMPMDAADKEPSIRRQDSFEMRLPELPKIDVHSSNRQTSNGSD 666 (1303)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (1303)
.... .. .......+... .
T Consensus 648 ---------------------~~~~---~~--------------~~~~~~~~~~~------------------------~ 665 (1284)
T 3g5u_A 648 ---------------------DMSS---KD--------------SGSSLIRRRST------------------------R 665 (1284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------CCCC---CC--------------CCCCCCCCCCC------------------------C
T ss_conf ---------------------3333---33--------------33200034543------------------------3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999887779976655556555689999999985012443210686217887665489799999999999998987879
Q 000750 667 PESPISPLLTSDPKNERSHSQTFSRPHSHSDDFPTKVREEESKHQKAPSFWRLAELSFAEWLYAVLGSIGAAIFGSFNPL 746 (1303)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~ 746 (1303)
.... ...... . .....+..........+++++.+.++.|+++.++.+..++.+.+.|.
T Consensus 666 --~~~~----~~~~~~--------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 723 (1284)
T 3g5u_A 666 --KSIC----GPHDQD--------R--------KLSTKEALDEDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPA 723 (1284)
T ss_dssp ----------------------------------------CCCCCSCCCTTHHHHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred --CCCC----CCCCCC--------C--------CCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf --3445----642233--------2--------11024555313662589999998451579999999999999999999
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99999999998518750233478799999999999999999999999999999999999999999999980994330014
Q 000750 747 LAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEE 826 (1303)
Q Consensus 747 ~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~ 826 (1303)
.+++++.+++.+...............|..++++++++..++.+++.+.+.+.+.++..++|.++|++++++|++||+++
T Consensus 724 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~ 803 (1284)
T 3g5u_A 724 FSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDP 803 (1284)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSC
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
T ss_conf 99999999999855685033677999999999999999999999999999999999999999999999983998887578
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67734699999813999999999989999999999999999999997999999999999999999999999977789999
Q 000750 827 ENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQ 906 (1303)
Q Consensus 827 ~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~i~~~~~~~~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~ 906 (1303)
.+++|++++|+++|+..++..++..+..++..+..++.++++++.++|.+++++++.+|++++..+...+++.....+..
T Consensus 804 ~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~ 883 (1284)
T 3g5u_A 804 KNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDK 883 (1284)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99889999999999999999999999999999999999999999996999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999409999981361899999999999999999999999999999999999999999999996986338
Q 000750 907 KMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDG 986 (1303)
Q Consensus 907 ~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 986 (1303)
+........+.|.+.|+++|++|+.++++.++|.+..+...+...+.....+...++.+.+.++..++++|++++++..+
T Consensus 884 ~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~ 963 (1284)
T 3g5u_A 884 KELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQ 963 (1284)
T ss_dssp HHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999889999984659999999999999999999999999999999999999999999999999999909
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
Q ss_conf 65978899999999999999788886499999999999999999822999899999898999976628997558987999
Q 000750 987 YMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSR 1066 (1303)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~ 1066 (1303)
.++++.++..+.++.+...++.........+.++..++.+++++++.+++.+........++...|.|+|+||+|+||++
T Consensus 964 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~ 1043 (1284)
T 3g5u_A 964 LMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTR 1043 (1284)
T ss_dssp CSCSTTHHHHHHHHHHHHHHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSSCCCTTTTSCCEEEEEEEBCCSCG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
T ss_conf 80699999999999999999999999999999999999999999838876666555665456777857999989977999
Q ss_pred CCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCH
Q ss_conf 98420111258863897999982799986889998705666986489999960699997876413688836786673128
Q 000750 1067 PEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTI 1146 (1303)
Q Consensus 1067 ~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTLl~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTI 1146 (1303)
++.++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|.+||+|++.++.+++|++++||||||.+|++||
T Consensus 1044 ~~~~~l~~vsl~i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti 1123 (1284)
T 3g5u_A 1044 PSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSI 1123 (1284)
T ss_dssp GGCCSBSSCCEEECSSSEEEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBH
T ss_pred CCCEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCH
T ss_conf 98700203059976998899988999978999999946867899779899998000789999702689877874066669
Q ss_pred HHHHHCCCC--CCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
Q ss_conf 999971888--999999999999951699998199987642478888889579999999999703999999847789999
Q 000750 1147 RENIIYARH--NASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIE 1224 (1303)
Q Consensus 1147 reNI~~g~~--~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSGGQkQRialARAll~~p~ILlLDEaTSaLD 1224 (1303)
+|||.++.+ ..++++++++++.++++++++++|+||||.+||+|.+||||||||+|||||++++|+||+||||||+||
T Consensus 1124 ~eNi~~~~~~~~~~~~~i~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD 1203 (1284)
T 3g5u_A 1124 AENIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALD 1203 (1284)
T ss_dssp HHHHTCCCSSCCCCHHHHHHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCC
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 99974668778999999999999839599997270424561178889338999999999999974999999868755579
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCC
Q ss_conf 8989999999998341992999983390067404989999698998833957896407166998855521433
Q 000750 1225 SESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQPHYGKGL 1297 (1303)
Q Consensus 1225 ~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~~g~y~~l~~~q~~~~~ 1297 (1303)
+++++.|++.+++... ++|+|+||||+++++.||+|+||++|+|+|.|+|++|++++|.|++||+.|..+..
T Consensus 1204 ~~~~~~i~~~l~~~~~-~~tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~~~g~y~~l~~~q~~~~~ 1275 (1284)
T 3g5u_A 1204 TESEKVVQEALDKARE-GRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQKGIYFSMVSVQAGAKR 1275 (1284)
T ss_dssp HHHHHHHHHHHHHHSS-SSCEEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHHSCSHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHCC-CCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCC
T ss_conf 9999999999998679-99899995587999809989999899899977899998477779999999761322
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=857.59 Aligned_cols=580 Identities=34% Similarity=0.525 Sum_probs=518.6
Q ss_pred CCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-----------------CHHHHHHHHHH
Q ss_conf 862178876654-897999999999999989878799999999999851875-----------------02334787999
Q 000750 712 KAPSFWRLAELS-FAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPE-----------------ERHHLREEVNK 773 (1303)
Q Consensus 712 ~~~~~~~~~~~~-~~~~~~~~l~~~~~~i~~~~~~~~~~~l~~~i~~~~~~~-----------------~~~~~~~~~~~ 773 (1303)
+...+++++.+. +..+++++++.+++++.++..|+..++++.+++.+.... ........+..
T Consensus 58 ~~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (1321)
T 4f4c_A 58 NKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMN 137 (1321)
T ss_dssp SCCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHH
T ss_pred CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 87799997315676789999999999999999999999999999999970100014543000344310016899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999980994330014677346999998139999999999899
Q 000750 774 WCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLS 853 (1303)
Q Consensus 774 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~l~ 853 (1303)
+++.+++++++.+++.+++.+++.+.+.+...++|.++|+|++++|++|||+ +++|++++|+++|++.+++.+...+.
T Consensus 138 ~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~--~~~G~l~sr~~~D~~~i~~~~~~~l~ 215 (1321)
T 4f4c_A 138 VVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDT--NHSGTLATKLFDNLERVKEGTGDKIG 215 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHH--TCCTTHHHHHHHHHHHHHHTSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999997889899879--98489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 99999999999999999997999999999999999999999999977789999999999999999994099999813618
Q 000750 854 IFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGN 933 (1303)
Q Consensus 854 ~~~~~~~~~i~~i~~~~~~~~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~gi~tI~~~~~~~ 933 (1303)
.++..+..++++++++++++|++++++++.+|++++......+...+..++.+....+....+.|.+.|+++||+|+.++
T Consensus 216 ~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 295 (1321)
T 4f4c_A 216 MAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLR 295 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999998399999821429
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999996986338659788999999999999997888864
Q 000750 934 KVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGL 1013 (1303)
Q Consensus 934 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1303)
.+.++|.+..++..+...+.....+...++..++.++..++++|++++++..|.++++.++.++.++.....++......
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~ 375 (1321)
T 4f4c_A 296 YELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQ 375 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999959986999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCC
Q ss_conf 99999999999999999822999899999898999976628997558987999984201112588638979999827999
Q 000750 1014 APYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGS 1093 (1303)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGS 1093 (1303)
...+.++..++.|++++++.+|..+........+....|.|+|+||+|+||++++.++|+|+||+|++|+++||||||||
T Consensus 376 ~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGs 455 (1321)
T 4f4c_A 376 LAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGC 455 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCC
T ss_conf 99999999999999999717853456665565677888767999855407999987433331886228827899805898
Q ss_pred CHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHH
Q ss_conf 86889998705666986489999960699997876413688836786673128999971888999999999999951699
Q 000750 1094 GKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHH 1173 (1303)
Q Consensus 1094 GKSTLl~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNI~~g~~~~~~~ei~~al~~a~l~~ 1173 (1303)
|||||+++|+|+|+|++|+|.+||+|++++++++||++|+||||||+||++||||||.+|.++++++++++||+.|++++
T Consensus 456 GKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~ 535 (1321)
T 4f4c_A 456 GKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEK 535 (1321)
T ss_dssp CHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHH
T ss_conf 57788887545651644861579965011259998504666587533207861678864155220999999998756546
Q ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCH
Q ss_conf 99819998764247888888957999999999970399999984778999989899999999983419929999833900
Q 000750 1174 FISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAA 1253 (1303)
Q Consensus 1174 ~I~~lp~Gldt~vge~G~~LSGGQkQRialARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ 1253 (1303)
||+.||+|+||.|||+|.+||||||||||||||++++|+||||||||||||+++|+.++++|+.+.+ ++|+|+||||++
T Consensus 536 ~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~-~~T~iiiaHrls 614 (1321)
T 4f4c_A 536 FIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAK-GRTTIIIAHRLS 614 (1321)
T ss_dssp HHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHT-TSEEEEECSCTT
T ss_pred HHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC-CCEEEEECCCHH
T ss_conf 8870888886075589887777787999999987259998998455446887899999999999847-988999736387
Q ss_pred HHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHH
Q ss_conf 67404989999698998833957896407166998855521
Q 000750 1254 MMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQPHYG 1294 (1303)
Q Consensus 1254 ti~~aD~I~vl~~G~Ive~Gt~~eLl~~~g~y~~l~~~q~~ 1294 (1303)
++++||+|+||++|+|+|+|+|+||++++|.|++|++.|..
T Consensus 615 ~i~~aD~Iivl~~G~ive~Gth~eL~~~~g~y~~l~~~q~~ 655 (1321)
T 4f4c_A 615 TIRNADLIISCKNGQVVEVGDHRALMAQQGLYYDLVTAQTF 655 (1321)
T ss_dssp TTTTCSEEEEEETTEEEEEECHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 89868989996399651368999999853279999996221
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=778.21 Aligned_cols=578 Identities=35% Similarity=0.596 Sum_probs=506.9
Q ss_pred CHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC----------------HHHHHHHHHHHHH
Q ss_conf 2178876654-8979999999999999898787999999999998518750----------------2334787999999
Q 000750 714 PSFWRLAELS-FAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEE----------------RHHLREEVNKWCL 776 (1303)
Q Consensus 714 ~~~~~~~~~~-~~~~~~~~l~~~~~~i~~~~~~~~~~~l~~~i~~~~~~~~----------------~~~~~~~~~~~~~ 776 (1303)
..+++++.+. +..++.+.++.+.+++.++..|+.+++++.+++.+..... ..........|.+
T Consensus 33 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (1284)
T 3g5u_A 33 VSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAY 112 (1284)
T ss_dssp CTTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 56999998726579999999999999999999999999999999986134443322222211111002446889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999980994330014677346999998139999999999899999
Q 000750 777 IIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFI 856 (1303)
Q Consensus 777 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~ 856 (1303)
++++++++..++.+++.+++.+.+.+...++|.++|++++++|++|||+ +++|++++|+++|++.++..++..+..++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~--~~~G~l~sr~~~D~~~i~~~~~~~~~~~~ 190 (1284)
T 3g5u_A 113 YYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDV--HDVGELNTRLTDDVSKINEGIGDKIGMFF 190 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHS--CCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999998699899756--88778999999889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 99999999999999997999999999999999999999999977789999999999999999994099999813618999
Q 000750 857 QDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVM 936 (1303)
Q Consensus 857 ~~~~~~i~~i~~~~~~~~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~ 936 (1303)
..+..+++++++++.++|++++++++.+|++++......+..++..++.+....+....+.|.+.|+++||+|+.++++.
T Consensus 191 ~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~ 270 (1284)
T 3g5u_A 191 QAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKEL 270 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHH
T ss_conf 99999999999999998999999999999999999999999999999999999999999999997879999846539999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999996986338659788999999999999997888864999
Q 000750 937 ELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPY 1016 (1303)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1303)
++|.+..++..+...+.....+...++..++..+..++++|+|+.++..|.+++|.++..+..+.....++.........
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (1284)
T 3g5u_A 271 ERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEA 350 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999929988999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCHH
Q ss_conf 99999999999999822999899999898999976628997558987999984201112588638979999827999868
Q 000750 1017 ILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKS 1096 (1303)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKS 1096 (1303)
+.++..++.|++++++.+++.++.......++...|.|+|+||+|+||++++.++|+|+||+|++||++|||||||||||
T Consensus 351 ~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKS 430 (1284)
T 3g5u_A 351 FANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKS 430 (1284)
T ss_dssp HHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHH
T ss_conf 99999999999999728986776665677777777718999989976999987101254589759988999899999799
Q ss_pred HHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHH
Q ss_conf 89998705666986489999960699997876413688836786673128999971888999999999999951699998
Q 000750 1097 TIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFIS 1176 (1303)
Q Consensus 1097 TLl~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNI~~g~~~~~~~ei~~al~~a~l~~~I~ 1176 (1303)
||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||||++|++||+|||.+|.++.++++++++++.+++++++.
T Consensus 431 Tl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~ 510 (1284)
T 3g5u_A 431 TTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIM 510 (1284)
T ss_dssp HHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH
T ss_conf 99999807889997389999998775799999865489868875377669999745798999999999999829699997
Q ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHH
Q ss_conf 19998764247888888957999999999970399999984778999989899999999983419929999833900674
Q 000750 1177 SLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR 1256 (1303)
Q Consensus 1177 ~lp~Gldt~vge~G~~LSGGQkQRialARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~ 1256 (1303)
.+|+|+||.+|++|.+||||||||+|||||++++|+|||||||||+||+++|+.+++.++.... ++|+|+||||+++++
T Consensus 511 ~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~i~ 589 (1284)
T 3g5u_A 511 KLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKARE-GRTTIVIAHRLSTVR 589 (1284)
T ss_dssp HSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHT-TSEEEEECSCHHHHT
T ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCEEEEEECCHHHHH
T ss_conf 4656334501478786599999999999999529998999798777799999999999999739-998999940778997
Q ss_pred HCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHH
Q ss_conf 04989999698998833957896407166998855521
Q 000750 1257 HVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQPHYG 1294 (1303)
Q Consensus 1257 ~aD~I~vl~~G~Ive~Gt~~eLl~~~g~y~~l~~~q~~ 1294 (1303)
.||+|+||++|+|+|.|+|++|++++|.|++++..|..
T Consensus 590 ~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 627 (1284)
T 3g5u_A 590 NADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTA 627 (1284)
T ss_dssp TCSEEEECSSSCCCCEECHHHHHHTTSHHHHHHHHTC-
T ss_pred CCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHH
T ss_conf 49989999899999978899998678779999997430
No 5
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=729.43 Aligned_cols=568 Identities=26% Similarity=0.394 Sum_probs=492.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66548979999999999999898787999999999998518750233478799999999999999999999999999999
Q 000750 720 AELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIM 799 (1303)
Q Consensus 720 ~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 799 (1303)
..+.++.++.+.++.++.++..++....+++++.+++...... .......+..+++++.++..++.+++.++..+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (587)
T 3qf4_A 15 ARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARG----DFSLVLKTGILMLIVALIGAVGGIGCTVFASYA 90 (587)
T ss_dssp GGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999987369----879999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998099433001467734699999813999999999989999999999999999999997999999
Q 000750 800 GEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALV 879 (1303)
Q Consensus 800 ~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~i~~~~~~~~~l~li 879 (1303)
+.++..++|.++|+++++.|+.||++ +++|++++|+++|++.+++.+...+..++...+.+++++++++.++|.++++
T Consensus 91 ~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~ 168 (587)
T 3qf4_A 91 SQNFGADLRRDLFRKVLSFSISNVNR--FHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSSV 168 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHH--SCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999997889799765--8889999999999999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999997778999999999999999999409999981361899999999999999999999999999
Q 000750 880 ALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGF 959 (1303)
Q Consensus 880 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 959 (1303)
+++.+|++.+......+..++..++.++...+....+.|.+.|+++||+|+.++.+.++|.+..++..+...+.....+.
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (587)
T 3qf4_A 169 LIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIVF 248 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998559999986214999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999999999999698633865978899999999999999788886499999999999999999822999899
Q 000750 960 AFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDP 1039 (1303)
Q Consensus 960 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1303)
..++...+..+..+++++++++++..|.+++|.++.+..+......++.........+.++..++.|+.++++.+++.++
T Consensus 249 ~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 328 (587)
T 3qf4_A 249 ALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIEE 328 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999984993899999999999999999999999999999999999999999768976578
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
Q ss_conf 99989899997662899755898799998420111258863897999982799986889998705666986489999960
Q 000750 1040 DDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRD 1119 (1303)
Q Consensus 1040 ~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTLl~lL~rl~~~~~G~I~idG~d 1119 (1303)
. ......+...+.|+++||+|+|+++. .++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|.+||+|
T Consensus 329 ~-~~~~~~~~~~~~i~~~~v~~~y~~~~-~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~~ 406 (587)
T 3qf4_A 329 A-DNALALPNVEGSVSFENVEFRYFENT-DPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELD 406 (587)
T ss_dssp C-TTCBCCSCCCCCEEEEEEEECSSSSS-CCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSSB
T ss_pred C-CCCCCCCCCCCCEEEEEEEEECCCCC-CCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
T ss_conf 8-77656688888079978899848999-764211179986998899989999979999999927866998679899998
Q ss_pred CCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 69999787641368883678667312899997188899999999999995169999819998764247888888957999
Q 000750 1120 LKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQ 1199 (1303)
Q Consensus 1120 i~~~~~~~lR~~i~~V~Qdp~LF~gTIreNI~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSGGQkQ 1199 (1303)
+++++.+++|++++||||+|++|++||+|||.++.+..++++++++++.++++++++.+|+|++|.++++|.+|||||||
T Consensus 407 i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGqrQ 486 (587)
T 3qf4_A 407 VRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQKQ 486 (587)
T ss_dssp GGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHHHH
T ss_pred CCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHHHH
T ss_conf 34078999984138977898676755999985248899999999999996849999756531212751898992999999
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999997039999998477899998989999999998341992999983390067404989999698998833957896
Q 000750 1200 RIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLL 1279 (1303)
Q Consensus 1200 RialARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl 1279 (1303)
|++||||++++|+||+||||||+||+++++.+++.+++... ++|+|+||||++++..||+|++|++|+|+|.|+|+||+
T Consensus 487 rv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el~ 565 (587)
T 3qf4_A 487 RLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTK-GCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKELL 565 (587)
T ss_dssp HHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHST-TCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHH
T ss_conf 99999999729999999797544799999999999998679-99899982276889819989999899899978899998
Q ss_pred HCCCHHHHHHHHHHHCC
Q ss_conf 40716699885552143
Q 000750 1280 AKNGLYVRLMQPHYGKG 1296 (1303)
Q Consensus 1280 ~~~g~y~~l~~~q~~~~ 1296 (1303)
++++.|++++..|..++
T Consensus 566 ~~~~~~~~~~~~~~~~~ 582 (587)
T 3qf4_A 566 EHCKPYREIYESQFGNG 582 (587)
T ss_dssp HHCHHHHHHHHHHC---
T ss_pred HCCCHHHHHHHHHHCCC
T ss_conf 67839999999984656
No 6
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=727.09 Aligned_cols=571 Identities=29% Similarity=0.417 Sum_probs=496.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 17887665489799999999999998987879999999999985187502334787999999999999999999999999
Q 000750 715 SFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHF 794 (1303)
Q Consensus 715 ~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 794 (1303)
.+++++.+.++.++.+.++.++.++.+++....+++++.+++....... ......+..+++++.++..++.+++.+
T Consensus 24 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (598)
T 3qf4_B 24 TLRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRR----FDLLPRYMLILGTIYALTSLLFWLQGK 99 (598)
T ss_dssp HHHHHGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC----GGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999999973688----899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999980994330014677346999998139999999999899999999999999999999979
Q 000750 795 YFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEW 874 (1303)
Q Consensus 795 ~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~i~~~~~~~~ 874 (1303)
+..+.+.++..++|.++|++++++|+.||++ +++|++++|+++|++.++..+...+..++..++.+++++++++.++|
T Consensus 100 ~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 177 (598)
T 3qf4_B 100 IMLTLSQDVVFRLRKELFEKLQRVPVGFFDR--TPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNV 177 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCTHHHHH--SCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999997799999768--88899999999999999999999999999999999999999999989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999977789999999999999999994099999813618999999999999999999999
Q 000750 875 RLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHG 954 (1303)
Q Consensus 875 ~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1303)
++++++++.+|++++......+..++..++.++...+....+.|.+.|+++||+|+.++.+.++|.+..++..+...+..
T Consensus 178 ~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 257 (598)
T 3qf4_B 178 ILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQ 257 (598)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999973799999748709999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999999999996986338659788999999999999997888864999999999999999998229
Q 000750 955 MAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRV 1034 (1303)
Q Consensus 955 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1303)
...+....+...+..+..+++++++++++..|.+++|.++..+.+......++.........+.++..++.|+.++++.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~ 337 (598)
T 3qf4_B 258 IFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLE 337 (598)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999999999859978999999999999999999999999999999999999999997688
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 99899999898999976628997558987999984201112588638979999827999868899987056669864899
Q 000750 1035 PKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVL 1114 (1303)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTLl~lL~rl~~~~~G~I~ 1114 (1303)
++.+.. .....+...+.|+++||+|+|+++ .++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|.
T Consensus 338 ~~~~~~--~~~~~~~~~~~i~~~~v~~~y~~~--~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~ 413 (598)
T 3qf4_B 338 EEKDDP--DAVELREVRGEIEFKNVWFSYDKK--KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQIL 413 (598)
T ss_dssp CCCCCS--SCCCCCSCCCCEEEEEEECCSSSS--SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEE
T ss_pred CCCCCC--CCCCCCCCCCEEEEEEEEEECCCC--CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEE
T ss_conf 777777--777777777718999989977999--8601222799869988999899999699999999458579980899
Q ss_pred ECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 99960699997876413688836786673128999971888999999999999951699998199987642478888889
Q 000750 1115 LDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLT 1194 (1303)
Q Consensus 1115 idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNI~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1194 (1303)
+||+|+++++.+.+|++++||||+|++|++||+|||.++.++.++++++++++.++++++++.+|+|++|.+|++|.+||
T Consensus 414 ~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LS 493 (598)
T 3qf4_B 414 VDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLS 493 (598)
T ss_dssp ETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSC
T ss_pred ECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCC
T ss_conf 99998301889999841089907982324639999744799999999999999969788897464532364227889879
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECC
Q ss_conf 57999999999970399999984778999989899999999983419929999833900674049899996989988339
Q 000750 1195 PGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1195 GGQkQRialARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt 1274 (1303)
||||||++||||++++|+||+||||||+||+++++.+++.+++... ++|+|+||||+++++.||+|++|++|+|+|.|+
T Consensus 494 gGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 572 (598)
T 3qf4_B 494 QGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLME-GKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGK 572 (598)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHT-TSEEEEESCCTTHHHHCSEEEEECSSSEEECSC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCEEEEEECCHHHHHCCCEEEEEECCEEEEECC
T ss_conf 9999999999999649999999897667999999999999999808-998999942778997199899998999998778
Q ss_pred HHHHHHCCCHHHHHHHHHHHCC
Q ss_conf 5789640716699885552143
Q 000750 1275 HDSLLAKNGLYVRLMQPHYGKG 1296 (1303)
Q Consensus 1275 ~~eLl~~~g~y~~l~~~q~~~~ 1296 (1303)
|+||++++|.|++++..|....
T Consensus 573 ~~~l~~~~~~~~~~~~~~~~~~ 594 (598)
T 3qf4_B 573 HDELIQKRGFYYELFTSQYGLV 594 (598)
T ss_dssp HHHHHHTTCHHHHHHHHHHGGG
T ss_pred HHHHHHCCCHHHHHHHHHHHHH
T ss_conf 9999867877999999976465
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=721.28 Aligned_cols=572 Identities=29% Similarity=0.418 Sum_probs=491.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 887665489799999999999998987879999999999985187502---33478799999999999999999999999
Q 000750 717 WRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEER---HHLREEVNKWCLIIACMGVVTVVANFLQH 793 (1303)
Q Consensus 717 ~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~l~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 793 (1303)
++++.+.++.++.+.++.+..++..++.++.+++++..++........ .........+...++++.++..++.+++.
T Consensus 3 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (578)
T 4a82_A 3 KRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQ 82 (578)
T ss_dssp HHHHHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999988999999999999999999999999999999999981687114677888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998099433001467734699999813999999999989999999999999999999997
Q 000750 794 FYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLE 873 (1303)
Q Consensus 794 ~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~i~~~~~~~ 873 (1303)
+...+.+.++..++|.++|+|++++|+.||++ +++|++++|+++|++.++..+...+..++...+.+++++++++.++
T Consensus 83 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 160 (578)
T 4a82_A 83 YLAQWTSNKILYDIRKKLYNHLQALSARFYAN--NQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLD 160 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHT--SCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999998789999768--9869999999999999999999999999999999999999999996
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999997778999999999999999999409999981361899999999999999999999
Q 000750 874 WRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLH 953 (1303)
Q Consensus 874 ~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~ 953 (1303)
|+++++.++.+|++++......+..++..++.+....+..+.+.|.+.|+++||+|+.++.+.++|.+..++..+...+.
T Consensus 161 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (578)
T 4a82_A 161 VKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH 240 (578)
T ss_dssp TTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999998249999981664999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999999999999999698633865978899999999999999788886499999999999999999822
Q 000750 954 GMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDR 1033 (1303)
Q Consensus 954 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1303)
....+....+...+..+..+++++++++++..|.+++|.++....++.....++.........+.++..++.|++++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 320 (578)
T 4a82_A 241 TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDE 320 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985995899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
Q ss_conf 99989999989899997662899755898799998420111258863897999982799986889998705666986489
Q 000750 1034 VPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQV 1113 (1303)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTLl~lL~rl~~~~~G~I 1113 (1303)
+++.+.. ......+...+.|+++||+|+|++. +.++|+|+||+|++||++|||||||||||||+++|.|+++|++|+|
T Consensus 321 ~~~~~~~-~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i 398 (578)
T 4a82_A 321 DYDIKNG-VGAQPIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQI 398 (578)
T ss_dssp CCSSCCC-TTCCCCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEE
T ss_pred CCCCCCC-CCCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEE
T ss_conf 9766678-7766667778807999999975899-9741343379987999999989999859999999846788999679
Q ss_pred EECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99996069999787641368883678667312899997188899999999999995169999819998764247888888
Q 000750 1114 LLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDL 1193 (1303)
Q Consensus 1114 ~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNI~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1193 (1303)
.+||+|+++++.+++|++++||||+|++|++|++|||.+|.++.++++++++++.++++++++.+|+|++|.+|++|.+|
T Consensus 399 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~L 478 (578)
T 4a82_A 399 LIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKL 478 (578)
T ss_dssp EETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTS
T ss_pred EECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCC
T ss_conf 99999844278999960068992898347645999985279998899999999880959999757330102530688967
Q ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEEC
Q ss_conf 95799999999997039999998477899998989999999998341992999983390067404989999698998833
Q 000750 1194 TPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1194 SGGQkQRialARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~G 1273 (1303)
|||||||++||||++++|+|++||||||+||+++++.+++.+++... ++|+|+||||+++++.||+|++|++|+++|.|
T Consensus 479 SgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 557 (578)
T 4a82_A 479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSK-DRTTLIVAHRLSTITHADKIVVIENGHIVETG 557 (578)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTT-TSEEEEECSSGGGTTTCSEEEEEETTEEEEEE
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 99999999999999749999999786545799999999999999808-99799983178999719989999899899988
Q ss_pred CHHHHHHCCCHHHHHHHHHH
Q ss_conf 95789640716699885552
Q 000750 1274 THDSLLAKNGLYVRLMQPHY 1293 (1303)
Q Consensus 1274 t~~eLl~~~g~y~~l~~~q~ 1293 (1303)
+|+||++++|.|++++..|.
T Consensus 558 ~~~el~~~~~~~~~~~~~q~ 577 (578)
T 4a82_A 558 THRELIAKQGAYEHLYSIQN 577 (578)
T ss_dssp CHHHHHHTTSHHHHHHTTTT
T ss_pred CHHHHHHCCCHHHHHHHHHC
T ss_conf 89999858838999998506
No 8
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=705.33 Aligned_cols=575 Identities=30% Similarity=0.489 Sum_probs=486.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87665489799999999999998987879999999999985187502334787999999999999999999999999999
Q 000750 718 RLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFG 797 (1303)
Q Consensus 718 ~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 797 (1303)
+++.+.++.++.+.++.+..++..++.++.+++++.+++........ ........+...++++.++..++.+++.+...
T Consensus 9 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (595)
T 2yl4_A 9 KLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTV-DYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQ 87 (595)
T ss_dssp HHHHHHGGGHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTS-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999887899999999999999999999999999999999735740-26679999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999980994330014677346999998139999999999899999999999999999999979999
Q 000750 798 IMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLA 877 (1303)
Q Consensus 798 ~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~i~~~~~~~~~l~ 877 (1303)
+.+.++..++|.++|++++++|+.||++ +++|++++|+++|++.++..+...+..++..++.+++.+++++.++|+++
T Consensus 88 ~~~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~ 165 (595)
T 2yl4_A 88 TSGQRIVNRLRTSLFSSILRQEVAFFDK--TRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLA 165 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHHH--SCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999998199999777--98488999999999999999999999999999999999999999819999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999977789999999999999999994099999813618999999999999999999999999
Q 000750 878 LVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAI 957 (1303)
Q Consensus 878 li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 957 (1303)
+++++.+|++++......+..++..++.++...+....+.|.++|+++||+|+.++.+.++|.+..++..+...+.....
T Consensus 166 li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (595)
T 2yl4_A 166 TFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFAR 245 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999981199999837569999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999999999999999996986338659788999999999999997888864999999999999999998229998
Q 000750 958 GFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKI 1037 (1303)
Q Consensus 958 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1303)
.....+..++..+..+++++++++++..|.+++|.++....+......++.........+.++..++.|++++++.+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~ 325 (595)
T 2yl4_A 246 AGFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKL 325 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999999999999999869978999999999999999999999999999999999999999998389766
Q ss_pred CCCCCCCCCCCCCCCC-EEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEC
Q ss_conf 9999989899997662-899755898799998420111258863897999982799986889998705666986489999
Q 000750 1038 DPDDSSAVKPPNVYGS-IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLD 1116 (1303)
Q Consensus 1038 ~~~~~~~~~~~~~~g~-I~f~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTLl~lL~rl~~~~~G~I~id 1116 (1303)
+... ....++...+. |+++||+|+|+++++.++|+|+||++++||++|||||||||||||+++|.|+++|++|+|.+|
T Consensus 326 ~~~~-~~~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~ 404 (595)
T 2yl4_A 326 PFNE-GVILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLD 404 (595)
T ss_dssp CSSC-SBCCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEET
T ss_pred CCCC-CCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEC
T ss_conf 7777-877776789983899988998589988812011279984998899989999979999999825857898379999
Q ss_pred CEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCC---CCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 9606999978764136888367866731289999718889---9999999999995169999819998764247888888
Q 000750 1117 GRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHN---ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDL 1193 (1303)
Q Consensus 1117 G~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNI~~g~~~---~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1193 (1303)
|+|+++++...+|++++||||+|.+|++|++|||.++.+. .++++++++++.++++++++++|+|+||.+|++|.+|
T Consensus 405 g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~L 484 (595)
T 2yl4_A 405 GHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLL 484 (595)
T ss_dssp TEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCCC
T ss_pred CEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99811179999973228983688326877999984058776656899999999986979999747320135016887868
Q ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEEC
Q ss_conf 95799999999997039999998477899998989999999998341992999983390067404989999698998833
Q 000750 1194 TPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1194 SGGQkQRialARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~G 1273 (1303)
|||||||++||||++++|+|++||||||+||+++++.+++.+++... ++|+|+||||+++++.||+|++|++|+++|.|
T Consensus 485 SgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g 563 (595)
T 2yl4_A 485 SGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMD-GRTVLVIAHRLSTIKNANMVAVLDQGKITEYG 563 (595)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHT-TSEEEEECCCHHHHHHSSEEEEEETTEEEEEE
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC-CCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 99999999999999759999999886668998999999999999965-99799994687899759989999899899978
Q ss_pred CHHHHHHC-CCHHHHHHHHHHHCCC
Q ss_conf 95789640-7166998855521433
Q 000750 1274 THDSLLAK-NGLYVRLMQPHYGKGL 1297 (1303)
Q Consensus 1274 t~~eLl~~-~g~y~~l~~~q~~~~~ 1297 (1303)
+|+||+++ ++.|++++..|....-
T Consensus 564 ~~~~l~~~~~~~~~~~~~~q~~~~~ 588 (595)
T 2yl4_A 564 KHEELLSKPNGIYRKLMNKQSFISA 588 (595)
T ss_dssp CSCC------C--------------
T ss_pred CHHHHHHCCCHHHHHHHHHHHCCCC
T ss_conf 8999974787299999997430254
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=701.65 Aligned_cols=568 Identities=27% Similarity=0.407 Sum_probs=489.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78876654897999999999999989878799999999999851875023347879999999999999999999999999
Q 000750 716 FWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFY 795 (1303)
Q Consensus 716 ~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 795 (1303)
+++++.+.++.++.+.++.+..++.+++.++.+++++.+++...... . ..........++++.++..++.++..+.
T Consensus 13 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (582)
T 3b5x_A 13 FKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNA--E--SNFLRILPFMILGLMFVRGLSGFASSYC 88 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--C--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998899999999999999999999999999999999986468--6--6799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999809943300146773469999981399999999998999999999999999999999799
Q 000750 796 FGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWR 875 (1303)
Q Consensus 796 ~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~i~~~~~~~~~ 875 (1303)
..+.+.++..++|.++++++++.|+.||++ +++|++++|+++|++.++..+...+..++..++.+++.+++++.++|+
T Consensus 89 ~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~ 166 (582)
T 3b5x_A 89 LSWVSGNVVMQMRRRLFNHFMHMPVRFFDQ--ESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQ 166 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999998699999778--987899999998899999999999999999999999999999998299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999777899999999999999999940999998136189999999999999999999999
Q 000750 876 LALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGM 955 (1303)
Q Consensus 876 l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1303)
+++++++.+|++++......+..++..++.+....+..+.+.|.+.|+++||+|+.++.+.++|.+..++..+...+...
T Consensus 167 l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 246 (582)
T 3b5x_A 167 LSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVS 246 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999951999997087599999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999999999999969863386597889999999999999978888649999999999999999982299
Q 000750 956 AIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVP 1035 (1303)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1303)
.......+..++..+..+++++++++.+..|.+++|.++.+..+......++.........+.++..++.|+.++++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 326 (582)
T 3b5x_A 247 AQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLET 326 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999999998599889999999999999999999999999999999999999999975897
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 98999998989999766289975589879999842011125886389799998279998688999870566698648999
Q 000750 1036 KIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLL 1115 (1303)
Q Consensus 1036 ~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTLl~lL~rl~~~~~G~I~i 1115 (1303)
+.++ . ..+.+...+.|+++||+|+|++++ .++|+|+||++++||++|||||||||||||+++|.|+++|++|+|.+
T Consensus 327 ~~~~-~--~~~~~~~~~~i~~~~v~~~y~~~~-~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~ 402 (582)
T 3b5x_A 327 ERDN-G--KYEAERVNGEVDVKDVTFTYQGKE-KPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICL 402 (582)
T ss_pred CCCC-C--CCCCCCCCCEEEEEEEEEECCCCC-CCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf 6777-7--777777888289999899728998-65400416998799989998999997999999996577899987989
Q ss_pred CCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCC-CCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 996069999787641368883678667312899997188-8999999999999951699998199987642478888889
Q 000750 1116 DGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYAR-HNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLT 1194 (1303)
Q Consensus 1116 dG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNI~~g~-~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1194 (1303)
||+|+++++...+|++++||||+|.+|++|++|||.++. ++.++++++++++.++++++++++|+|+||.++++|.+||
T Consensus 403 ~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LS 482 (582)
T 3b5x_A 403 DGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLS 482 (582)
T ss_pred CCEEHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCC
T ss_conf 99985638899996485898279905310299998566889999999999999879899998476533451068888479
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECC
Q ss_conf 57999999999970399999984778999989899999999983419929999833900674049899996989988339
Q 000750 1195 PGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1195 GGQkQRialARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt 1274 (1303)
||||||++||||++++|+|++||||||+||+++++.+++.+++... ++|+|+||||+++++.||+|++|++|++++.|+
T Consensus 483 gGq~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 561 (582)
T 3b5x_A 483 GGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQK-NKTVLVIAHRLSTIEQADEILVVDEGEIIERGR 561 (582)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
T ss_conf 9999999999999749999999785446899999999999999728-998999936889998199899998998999778
Q ss_pred HHHHHHCCCHHHHHHHHHHH
Q ss_conf 57896407166998855521
Q 000750 1275 HDSLLAKNGLYVRLMQPHYG 1294 (1303)
Q Consensus 1275 ~~eLl~~~g~y~~l~~~q~~ 1294 (1303)
|+||+++++.|+++++.|..
T Consensus 562 ~~~l~~~~~~~~~~~~~q~~ 581 (582)
T 3b5x_A 562 HADLLAQDGAYAQLHRIQFG 581 (582)
T ss_pred HHHHHHCCCHHHHHHHHHHC
T ss_conf 99998488589999998612
No 10
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=700.50 Aligned_cols=568 Identities=29% Similarity=0.444 Sum_probs=487.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78876654897999999999999989878799999999999851875023347879999999999999999999999999
Q 000750 716 FWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFY 795 (1303)
Q Consensus 716 ~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 795 (1303)
+++++.+.++.++.+.++.++.++..++..+.+++++.+++...... . ..........++++.++..++.+++.+.
T Consensus 13 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (582)
T 3b60_A 13 FRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKT--D--RSVLLWMPLVVIGLMILRGITSYISSYC 88 (582)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTST--T--HHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--C--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999884368--6--5799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999809943300146773469999981399999999998999999999999999999999799
Q 000750 796 FGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWR 875 (1303)
Q Consensus 796 ~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~i~~~~~~~~~ 875 (1303)
..+.+.++..++|.++++++++.|+.||++ +++|++++|+++|++.++..+...+..++..++.+++.+++++.++|+
T Consensus 89 ~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~ 166 (582)
T 3b60_A 89 ISWVSGKVVMTMRRRLFGHMMGMPVAFFDK--QSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQ 166 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCSTHHHH--SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999998099999788--986589999998799999999999999999999999999999998099
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999777899999999999999999940999998136189999999999999999999999
Q 000750 876 LALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGM 955 (1303)
Q Consensus 876 l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1303)
+++++++.+|++++......+..++..++.++...+..+.+.|.+.|+++||+|+.++.+.++|.+..++..+...+...
T Consensus 167 l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 246 (582)
T 3b60_A 167 LSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVS 246 (582)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999961999998376899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999999999999969863386597889999999999999978888649999999999999999982299
Q 000750 956 AIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVP 1035 (1303)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1303)
.......+..++..+..+++++++++.+..|.+++|.++.+..+......++.........+.++..++.|+.++++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 326 (582)
T 3b60_A 247 ASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQ 326 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999999998499989999999999999999999999999999999999999999975998
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 98999998989999766289975589879999842011125886389799998279998688999870566698648999
Q 000750 1036 KIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLL 1115 (1303)
Q Consensus 1036 ~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTLl~lL~rl~~~~~G~I~i 1115 (1303)
+.+. . ....+...+.|+++||+|+|+++. .++|+|+||++++||++|||||||||||||+++|.|+++|++|+|.+
T Consensus 327 ~~~~-~--~~~~~~~~~~i~~~~v~~~y~~~~-~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~ 402 (582)
T 3b60_A 327 EKDE-G--KRVIDRATGDLEFRNVTFTYPGRE-VPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILM 402 (582)
T ss_dssp SCCC-C--CBCCSCCCCCEEEEEEEECSSSSS-CCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEE
T ss_pred CCCC-C--CCCCCCCCCCEEEEEEEEECCCCC-CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEE
T ss_conf 7667-7--777778888479998899739999-74415615997699989998999998999999986106898976979
Q ss_pred CCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCC-CCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 996069999787641368883678667312899997188-8999999999999951699998199987642478888889
Q 000750 1116 DGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYAR-HNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLT 1194 (1303)
Q Consensus 1116 dG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNI~~g~-~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1194 (1303)
||+|+++++...+|++++||||+|.+|++|++|||.++. ++.++++++++++.++++++++++|+|+||.++++|.+||
T Consensus 403 ~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LS 482 (582)
T 3b60_A 403 DGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLS 482 (582)
T ss_dssp TTEETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSC
T ss_pred CCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 99982306999999608088068747787899998545999989999999999849799998450411451147988789
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECC
Q ss_conf 57999999999970399999984778999989899999999983419929999833900674049899996989988339
Q 000750 1195 PGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1195 GGQkQRialARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt 1274 (1303)
||||||++||||++++|+|++||||||+||+++++.+++.+++... ++|+|+||||+++++.||+|++|++|++++.|+
T Consensus 483 gGq~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 561 (582)
T 3b60_A 483 GGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQK-NRTSLVIAHRLSTIEQADEIVVVEDGIIVERGT 561 (582)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHT-TSEEEEECSCGGGTTTCSEEEEEETTEEEEEEC
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC-CCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
T ss_conf 9999999999999728998999786555798999999999999967-997999945477898599899997888988458
Q ss_pred HHHHHHCCCHHHHHHHHHHH
Q ss_conf 57896407166998855521
Q 000750 1275 HDSLLAKNGLYVRLMQPHYG 1294 (1303)
Q Consensus 1275 ~~eLl~~~g~y~~l~~~q~~ 1294 (1303)
|+||+++++.|+++++.|..
T Consensus 562 ~~~l~~~~~~~~~~~~~q~~ 581 (582)
T 3b60_A 562 HSELLAQHGVYAQLHKMQFG 581 (582)
T ss_dssp HHHHHHHTSSHHHHHHHTCC
T ss_pred HHHHHHCCCHHHHHHHHHCC
T ss_conf 99998769889999997502
Done!