Query 000751
Match_columns 1303
No_of_seqs 673 out of 4928
Neff 8.3
Searched_HMMs 46136
Date Mon Apr 1 23:04:03 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000751.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000751hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 7E-211 2E-215 1929.1 124.6 1156 28-1294 69-1227(1228)
2 PTZ00265 multidrug resistance 100.0 9E-168 2E-172 1669.3 149.0 1171 31-1292 98-1465(1466)
3 KOG0054 Multidrug resistance-a 100.0 2E-162 5E-167 1536.7 121.8 1093 56-1292 264-1375(1381)
4 PLN03130 ABC transporter C fam 100.0 1E-154 3E-159 1556.7 143.4 1090 55-1294 366-1476(1622)
5 PLN03232 ABC transporter C fam 100.0 4E-153 1E-157 1545.7 138.9 1090 55-1294 366-1473(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 6E-148 1E-152 1498.0 142.1 1120 54-1291 382-1519(1522)
7 PTZ00243 ABC transporter; Prov 100.0 5E-141 1E-145 1424.7 141.9 1106 52-1294 307-1548(1560)
8 TIGR01271 CFTR_protein cystic 100.0 6E-139 1E-143 1405.5 141.1 1182 53-1297 145-1457(1490)
9 KOG0058 Peptide exporter, ABC 100.0 4E-108 9E-113 963.2 68.3 576 715-1298 134-710 (716)
10 KOG0058 Peptide exporter, ABC 100.0 4E-105 1E-109 937.7 62.7 519 28-548 186-707 (716)
11 KOG0055 Multidrug/pheromone ex 100.0 2.4E-96 5E-101 910.3 63.0 515 32-546 709-1226(1228)
12 COG2274 SunT ABC-type bacterio 100.0 4E-91 8.7E-96 859.6 72.7 564 719-1292 145-708 (709)
13 COG2274 SunT ABC-type bacterio 100.0 8.2E-91 1.8E-95 856.8 67.1 528 14-545 179-708 (709)
14 COG1132 MdlB ABC-type multidru 100.0 2.2E-84 4.7E-89 811.8 75.8 552 729-1294 15-566 (567)
15 PRK11174 cysteine/glutathione 100.0 3E-84 6.4E-89 815.5 77.0 569 716-1295 10-587 (588)
16 PRK11174 cysteine/glutathione 100.0 6.5E-85 1.4E-89 821.5 69.1 503 39-546 72-585 (588)
17 COG1132 MdlB ABC-type multidru 100.0 4.6E-84 9.9E-89 808.9 69.5 508 35-546 57-565 (567)
18 TIGR00958 3a01208 Conjugate Tr 100.0 2.2E-83 4.8E-88 817.8 75.0 565 714-1289 147-711 (711)
19 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 3.9E-82 8.5E-87 808.0 77.9 553 726-1293 134-686 (686)
20 PTZ00265 multidrug resistance 100.0 4.8E-83 1E-87 854.7 69.4 511 32-545 868-1465(1466)
21 TIGR00958 3a01208 Conjugate Tr 100.0 1.3E-82 2.9E-87 810.6 68.7 501 38-541 209-710 (711)
22 COG4988 CydD ABC-type transpor 100.0 5.5E-82 1.2E-86 730.9 67.0 512 32-547 42-557 (559)
23 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 4.7E-82 1E-86 807.2 71.8 525 14-545 161-685 (686)
24 COG4988 CydD ABC-type transpor 100.0 2.5E-81 5.4E-86 725.5 70.2 549 736-1294 8-557 (559)
25 TIGR01193 bacteriocin_ABC ABC- 100.0 1.5E-81 3.3E-86 805.4 75.8 563 716-1290 144-707 (708)
26 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.2E-81 4.8E-86 805.0 75.2 561 718-1289 144-709 (710)
27 PRK11160 cysteine/glutathione 100.0 1.3E-81 2.9E-86 784.5 69.6 501 39-543 69-572 (574)
28 TIGR01193 bacteriocin_ABC ABC- 100.0 2.2E-81 4.9E-86 803.8 69.3 501 38-543 204-707 (708)
29 PRK11160 cysteine/glutathione 100.0 2.7E-80 5.9E-85 772.7 76.1 565 718-1290 6-572 (574)
30 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.5E-81 5.5E-86 804.4 68.4 502 36-542 200-709 (710)
31 KOG0057 Mitochondrial Fe/S clu 100.0 4E-81 8.7E-86 709.2 60.2 544 742-1294 44-588 (591)
32 PRK11176 lipid transporter ATP 100.0 1.5E-79 3.3E-84 772.5 76.6 561 724-1295 21-582 (582)
33 KOG0056 Heavy metal exporter H 100.0 3.8E-83 8.3E-88 704.8 38.1 506 785-1297 272-779 (790)
34 KOG0056 Heavy metal exporter H 100.0 1.4E-83 3.1E-88 708.2 34.2 500 45-548 274-777 (790)
35 TIGR03375 type_I_sec_LssB type 100.0 1.5E-79 3.2E-84 785.3 76.4 550 721-1281 140-689 (694)
36 PRK10790 putative multidrug tr 100.0 2.5E-79 5.3E-84 770.8 76.9 567 716-1295 11-578 (592)
37 PRK11176 lipid transporter ATP 100.0 6.6E-80 1.4E-84 775.8 70.4 505 39-546 74-580 (582)
38 TIGR03375 type_I_sec_LssB type 100.0 3.8E-80 8.3E-85 790.7 68.1 492 39-534 196-689 (694)
39 TIGR01846 type_I_sec_HlyB type 100.0 1.2E-78 2.5E-83 776.2 77.5 565 718-1293 129-693 (694)
40 PRK10790 putative multidrug tr 100.0 5.2E-79 1.1E-83 767.9 71.2 503 40-548 75-578 (592)
41 TIGR01846 type_I_sec_HlyB type 100.0 3.7E-79 8E-84 780.8 70.0 528 14-545 164-692 (694)
42 PRK10789 putative multidrug tr 100.0 3.2E-78 6.9E-83 754.2 70.2 506 39-547 45-552 (569)
43 TIGR02203 MsbA_lipidA lipid A 100.0 1.6E-77 3.4E-82 753.7 76.4 562 721-1293 7-569 (571)
44 COG4987 CydC ABC-type transpor 100.0 6.1E-78 1.3E-82 683.2 65.2 506 777-1290 63-571 (573)
45 COG4987 CydC ABC-type transpor 100.0 2.1E-78 4.5E-83 687.0 60.5 501 39-543 67-571 (573)
46 PRK13657 cyclic beta-1,2-gluca 100.0 4.1E-77 8.8E-82 749.4 78.1 569 715-1296 6-574 (588)
47 KOG0057 Mitochondrial Fe/S clu 100.0 1.3E-78 2.9E-83 688.6 57.2 508 34-546 78-587 (591)
48 TIGR02203 MsbA_lipidA lipid A 100.0 1.2E-77 2.5E-82 754.8 69.7 507 36-545 60-568 (571)
49 TIGR02868 CydC thiol reductant 100.0 4E-78 8.6E-83 750.4 64.3 462 40-505 63-529 (529)
50 TIGR01192 chvA glucan exporter 100.0 3.1E-76 6.7E-81 737.0 78.3 566 716-1294 7-572 (585)
51 PRK13657 cyclic beta-1,2-gluca 100.0 5.3E-77 1.2E-81 748.3 70.0 489 55-546 81-571 (588)
52 TIGR02868 CydC thiol reductant 100.0 7.6E-77 1.6E-81 738.9 70.4 520 723-1252 8-529 (529)
53 TIGR02204 MsbA_rel ABC transpo 100.0 3.5E-76 7.6E-81 741.7 76.3 562 724-1292 14-575 (576)
54 PRK10789 putative multidrug tr 100.0 2.9E-76 6.4E-81 736.5 73.3 542 744-1295 11-553 (569)
55 TIGR01192 chvA glucan exporter 100.0 2E-76 4.3E-81 738.7 70.6 489 55-546 81-571 (585)
56 COG5265 ATM1 ABC-type transpor 100.0 8.4E-79 1.8E-83 667.6 41.2 492 794-1290 4-496 (497)
57 TIGR02204 MsbA_rel ABC transpo 100.0 2.8E-76 6E-81 742.6 69.2 507 38-545 66-575 (576)
58 TIGR00957 MRP_assoc_pro multi 100.0 4.8E-76 1E-80 797.3 68.8 501 39-544 1014-1519(1522)
59 COG5265 ATM1 ABC-type transpor 100.0 1.1E-77 2.4E-82 658.8 42.0 488 53-543 5-496 (497)
60 TIGR02857 CydD thiol reductant 100.0 1.1E-75 2.4E-80 728.5 65.3 505 10-517 24-529 (529)
61 TIGR02857 CydD thiol reductant 100.0 4.3E-74 9.4E-79 714.2 71.3 525 730-1264 5-529 (529)
62 PLN03130 ABC transporter C fam 100.0 1.6E-74 3.6E-79 779.9 68.9 504 37-546 960-1475(1622)
63 PTZ00243 ABC transporter; Prov 100.0 2.2E-74 4.7E-79 778.1 68.5 500 44-545 1012-1546(1560)
64 TIGR01842 type_I_sec_PrtD type 100.0 6E-74 1.3E-78 713.4 67.0 513 10-533 27-542 (544)
65 TIGR01842 type_I_sec_PrtD type 100.0 7.4E-73 1.6E-77 703.6 73.6 534 731-1281 9-543 (544)
66 PLN03232 ABC transporter C fam 100.0 8.3E-74 1.8E-78 774.5 66.3 504 37-546 957-1472(1495)
67 COG1123 ATPase components of v 100.0 5.9E-74 1.3E-78 668.5 47.3 478 308-1291 5-531 (539)
68 TIGR01271 CFTR_protein cystic 100.0 1.1E-70 2.4E-75 742.5 68.2 497 43-547 938-1454(1490)
69 PRK10261 glutathione transport 100.0 2.2E-71 4.8E-76 695.7 50.5 227 1053-1290 313-565 (623)
70 TIGR01194 cyc_pep_trnsptr cycl 100.0 5E-70 1.1E-74 677.8 62.0 475 39-525 62-551 (555)
71 PRK13549 xylose transporter AT 100.0 8.1E-72 1.7E-76 687.6 43.1 462 308-1279 5-493 (506)
72 COG4618 ArpD ABC-type protease 100.0 1.8E-70 4E-75 615.4 48.4 512 14-534 48-561 (580)
73 COG4618 ArpD ABC-type protease 100.0 8.5E-70 1.8E-74 610.1 52.9 528 739-1281 34-561 (580)
74 TIGR01194 cyc_pep_trnsptr cycl 100.0 8.6E-69 1.9E-73 666.7 67.3 534 716-1272 5-551 (555)
75 PRK15134 microcin C ABC transp 100.0 6E-71 1.3E-75 683.6 47.8 217 1053-1281 275-516 (529)
76 TIGR01257 rim_protein retinal- 100.0 2E-67 4.3E-72 697.9 76.2 215 307-534 927-1150(2272)
77 PRK09700 D-allose transporter 100.0 2.2E-70 4.8E-75 676.1 44.7 212 308-529 5-230 (510)
78 TIGR03269 met_CoM_red_A2 methy 100.0 3.5E-70 7.5E-75 676.0 45.0 223 1053-1281 279-518 (520)
79 PRK10762 D-ribose transporter 100.0 3.6E-70 7.7E-75 672.2 43.1 210 308-527 4-224 (501)
80 KOG0054 Multidrug resistance-a 100.0 1.2E-68 2.6E-73 680.9 56.6 500 35-543 863-1373(1381)
81 PRK15439 autoinducer 2 ABC tra 100.0 1.5E-69 3.3E-74 666.7 45.7 210 308-531 11-227 (510)
82 TIGR02633 xylG D-xylose ABC tr 100.0 1.4E-69 3E-74 668.0 43.2 215 1053-1277 257-489 (500)
83 PRK11288 araG L-arabinose tran 100.0 1.2E-69 2.7E-74 667.4 41.9 207 308-524 4-220 (501)
84 TIGR00956 3a01205 Pleiotropic 100.0 4.4E-67 9.6E-72 701.3 62.5 213 1053-1276 759-989 (1394)
85 COG4172 ABC-type uncharacteriz 100.0 2.6E-68 5.7E-73 579.6 41.0 469 308-1287 6-524 (534)
86 PRK10938 putative molybdenum t 100.0 1.6E-68 3.4E-73 657.0 43.6 208 309-531 4-222 (490)
87 PRK10982 galactose/methyl gala 100.0 2E-68 4.2E-73 655.7 42.8 207 311-527 1-217 (491)
88 PRK15064 ABC transporter ATP-b 100.0 9.3E-67 2E-71 646.3 53.4 203 1053-1283 319-528 (530)
89 PRK10522 multidrug transporter 100.0 3E-65 6.5E-70 635.2 63.1 471 44-532 62-538 (547)
90 PRK10522 multidrug transporter 100.0 6.8E-64 1.5E-68 623.1 67.6 475 786-1282 62-541 (547)
91 PRK11819 putative ABC transpor 100.0 6.7E-65 1.5E-69 631.2 54.9 202 1053-1281 324-534 (556)
92 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.2E-64 2.7E-69 629.1 53.9 208 308-533 4-248 (552)
93 PLN03140 ABC transporter G fam 100.0 6E-63 1.3E-67 657.4 61.2 215 1052-1276 866-1106(1470)
94 PRK10636 putative ABC transpor 100.0 7.6E-63 1.7E-67 618.5 53.4 201 1053-1280 312-517 (638)
95 PRK11147 ABC transporter ATPas 100.0 3.2E-61 7E-66 606.0 54.1 201 1053-1280 319-528 (635)
96 TIGR00954 3a01203 Peroxysomal 100.0 1.2E-60 2.7E-65 600.6 57.1 460 41-519 150-653 (659)
97 PLN03073 ABC transporter F fam 100.0 2E-61 4.3E-66 605.3 48.9 200 1053-1279 508-713 (718)
98 TIGR00954 3a01203 Peroxysomal 100.0 1.4E-59 3E-64 591.1 63.6 529 716-1266 79-653 (659)
99 PRK13409 putative ATPase RIL; 100.0 3.5E-61 7.5E-66 593.7 38.9 194 1053-1275 340-537 (590)
100 COG1129 MglA ABC-type sugar tr 100.0 3.4E-60 7.5E-65 550.0 41.5 455 308-1275 8-485 (500)
101 COG0488 Uup ATPase components 100.0 1.6E-58 3.5E-63 553.0 46.6 204 1052-1282 320-527 (530)
102 COG3845 ABC-type uncharacteriz 100.0 1.6E-57 3.6E-62 514.1 40.7 462 308-1277 4-489 (501)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.6E-52 5.6E-57 468.5 28.4 238 1052-1293 1-238 (275)
104 COG1126 GlnQ ABC-type polar am 100.0 4.4E-50 9.5E-55 408.0 22.0 216 1053-1282 2-227 (240)
105 COG1126 GlnQ ABC-type polar am 100.0 8.6E-50 1.9E-54 405.8 20.4 214 308-535 2-227 (240)
106 cd03289 ABCC_CFTR2 The CFTR su 100.0 5.3E-49 1.1E-53 441.8 27.5 237 307-545 1-237 (275)
107 COG1135 AbcC ABC-type metal io 100.0 3.3E-48 7.2E-53 414.2 21.8 226 1054-1290 2-243 (339)
108 PRK14257 phosphate ABC transpo 100.0 1.5E-47 3.3E-52 441.1 27.5 224 1050-1282 77-315 (329)
109 COG1117 PstB ABC-type phosphat 100.0 2.8E-48 6E-53 392.1 17.1 218 308-535 7-239 (253)
110 COG1125 OpuBA ABC-type proline 100.0 4.2E-48 9.1E-53 400.2 17.7 213 309-535 2-227 (309)
111 COG1117 PstB ABC-type phosphat 100.0 3.5E-47 7.6E-52 384.1 18.9 219 1052-1281 6-238 (253)
112 COG1135 AbcC ABC-type metal io 100.0 2.9E-47 6.4E-52 407.0 18.5 216 309-535 2-233 (339)
113 COG1125 OpuBA ABC-type proline 100.0 1.5E-46 3.2E-51 388.8 20.2 220 1054-1287 2-233 (309)
114 cd03252 ABCC_Hemolysin The ABC 100.0 1.2E-45 2.5E-50 411.0 28.6 235 1054-1290 1-235 (237)
115 KOG0927 Predicted transporter 100.0 3.4E-45 7.4E-50 414.2 32.2 199 1053-1277 389-593 (614)
116 PRK14257 phosphate ABC transpo 100.0 6.9E-46 1.5E-50 427.4 25.4 223 305-535 77-315 (329)
117 cd03288 ABCC_SUR2 The SUR doma 100.0 7.2E-45 1.6E-49 408.6 29.2 240 1050-1292 16-256 (257)
118 COG4615 PvdE ABC-type sideroph 100.0 1.2E-42 2.5E-47 377.7 42.8 464 43-525 61-529 (546)
119 cd03252 ABCC_Hemolysin The ABC 100.0 8E-45 1.7E-49 404.3 26.6 234 309-543 1-235 (237)
120 cd03253 ABCC_ATM1_transporter 100.0 2.2E-44 4.7E-49 400.7 28.4 235 1054-1291 1-235 (236)
121 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3.9E-44 8.4E-49 399.1 28.2 236 1054-1290 1-236 (238)
122 COG1120 FepC ABC-type cobalami 100.0 1.5E-44 3.2E-49 389.8 23.0 215 1053-1281 2-229 (258)
123 cd03254 ABCC_Glucan_exporter_l 100.0 4.9E-44 1.1E-48 396.0 27.6 228 1052-1282 1-228 (229)
124 cd03251 ABCC_MsbA MsbA is an e 100.0 5.6E-44 1.2E-48 396.9 27.6 233 1054-1288 1-233 (234)
125 cd03288 ABCC_SUR2 The SUR doma 100.0 7.1E-44 1.5E-48 400.5 28.0 238 305-543 16-254 (257)
126 TIGR02314 ABC_MetN D-methionin 100.0 5.1E-44 1.1E-48 412.0 26.0 226 1054-1290 2-242 (343)
127 COG3839 MalK ABC-type sugar tr 100.0 1.9E-44 4.1E-49 403.8 21.7 212 308-535 3-225 (338)
128 cd03244 ABCC_MRP_domain2 Domai 100.0 1.1E-43 2.4E-48 391.0 26.9 221 1052-1275 1-221 (221)
129 KOG0065 Pleiotropic drug resis 100.0 4.7E-43 1E-47 434.6 35.1 199 1069-1277 804-1018(1391)
130 COG3840 ThiQ ABC-type thiamine 100.0 2E-44 4.3E-49 354.1 17.8 209 309-535 2-221 (231)
131 cd03253 ABCC_ATM1_transporter 100.0 1.2E-43 2.6E-48 394.8 26.5 233 309-543 1-234 (236)
132 COG1127 Ttg2A ABC-type transpo 100.0 7.4E-44 1.6E-48 368.3 22.4 221 308-542 8-245 (263)
133 cd03254 ABCC_Glucan_exporter_l 100.0 1.6E-43 3.4E-48 391.9 26.2 225 308-534 2-227 (229)
134 COG1122 CbiO ABC-type cobalt t 100.0 8.4E-44 1.8E-48 385.4 23.3 217 1053-1282 3-230 (235)
135 COG1116 TauB ABC-type nitrate/ 100.0 3.5E-44 7.6E-49 378.0 19.7 197 308-523 3-212 (248)
136 COG3839 MalK ABC-type sugar tr 100.0 9.8E-44 2.1E-48 398.1 24.0 213 1053-1281 3-224 (338)
137 PRK13631 cbiO cobalt transport 100.0 4.3E-43 9.2E-48 403.2 29.3 222 1053-1281 21-266 (320)
138 cd03244 ABCC_MRP_domain2 Domai 100.0 2.2E-43 4.7E-48 388.6 25.8 219 308-527 2-220 (221)
139 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.5E-43 5.4E-48 392.6 26.5 233 309-541 1-234 (238)
140 COG1120 FepC ABC-type cobalami 100.0 4.6E-44 9.9E-49 386.0 19.8 213 308-534 2-229 (258)
141 cd03251 ABCC_MsbA MsbA is an e 100.0 2.3E-43 5E-48 392.0 26.0 231 309-540 1-232 (234)
142 COG3842 PotA ABC-type spermidi 100.0 3.8E-44 8.3E-49 403.5 19.5 212 308-535 5-228 (352)
143 COG3840 ThiQ ABC-type thiamine 100.0 1.1E-43 2.4E-48 348.8 20.0 212 1054-1283 2-222 (231)
144 COG2884 FtsE Predicted ATPase 100.0 4.3E-44 9.2E-49 355.3 16.5 206 309-527 2-220 (223)
145 COG1124 DppF ABC-type dipeptid 100.0 2.1E-43 4.7E-48 367.5 21.7 227 1053-1290 3-242 (252)
146 cd03261 ABC_Org_Solvent_Resist 100.0 3.1E-43 6.8E-48 390.8 24.4 219 1054-1286 1-232 (235)
147 COG1136 SalX ABC-type antimicr 100.0 4.9E-43 1.1E-47 370.6 24.6 207 1054-1271 2-222 (226)
148 COG1122 CbiO ABC-type cobalt t 100.0 1.7E-43 3.7E-48 383.0 21.4 214 308-534 3-229 (235)
149 cd03245 ABCC_bacteriocin_expor 100.0 8.5E-43 1.8E-47 383.6 27.2 220 1052-1273 1-220 (220)
150 COG1136 SalX ABC-type antimicr 100.0 5.1E-43 1.1E-47 370.4 23.3 206 309-524 2-222 (226)
151 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 6.1E-43 1.3E-47 374.9 24.1 211 1053-1281 4-228 (254)
152 COG4615 PvdE ABC-type sideroph 100.0 4.4E-40 9.5E-45 357.7 46.5 475 775-1272 51-529 (546)
153 COG1116 TauB ABC-type nitrate/ 100.0 3.5E-43 7.5E-48 370.5 21.5 198 1053-1269 3-211 (248)
154 COG2884 FtsE Predicted ATPase 100.0 1.9E-43 4.1E-48 350.7 18.0 209 1054-1275 2-221 (223)
155 COG3638 ABC-type phosphate/pho 100.0 2.3E-43 5E-48 363.7 18.9 213 308-533 3-237 (258)
156 TIGR02314 ABC_MetN D-methionin 100.0 5.2E-43 1.1E-47 403.6 23.7 223 309-542 2-241 (343)
157 PRK13650 cbiO cobalt transport 100.0 1.6E-42 3.5E-47 393.5 27.3 219 1053-1282 4-231 (279)
158 COG3638 ABC-type phosphate/pho 100.0 5.8E-43 1.2E-47 360.7 21.2 216 1053-1281 3-238 (258)
159 COG1127 Ttg2A ABC-type transpo 100.0 1.1E-42 2.3E-47 359.7 22.9 224 1053-1290 8-246 (263)
160 cd03260 ABC_PstB_phosphate_tra 100.0 7E-43 1.5E-47 386.0 23.1 212 1054-1278 1-227 (227)
161 PRK13631 cbiO cobalt transport 100.0 2.3E-42 5E-47 397.2 27.0 221 308-535 21-267 (320)
162 COG4178 ABC-type uncharacteriz 100.0 6.2E-39 1.4E-43 379.7 56.4 475 773-1266 87-588 (604)
163 cd03245 ABCC_bacteriocin_expor 100.0 3E-42 6.5E-47 379.3 25.9 218 308-526 2-220 (220)
164 KOG0062 ATPase component of AB 100.0 6.8E-42 1.5E-46 385.5 29.1 210 1053-1294 362-576 (582)
165 cd03248 ABCC_TAP TAP, the Tran 100.0 2.4E-42 5.1E-47 381.6 24.8 219 1050-1269 8-226 (226)
166 COG4178 ABC-type uncharacteriz 100.0 3E-39 6.5E-44 382.4 52.3 464 36-519 92-588 (604)
167 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.6E-42 3.5E-47 371.6 22.2 209 308-534 4-228 (254)
168 COG1124 DppF ABC-type dipeptid 100.0 1.4E-42 3E-47 361.5 20.6 216 308-534 3-232 (252)
169 PRK14250 phosphate ABC transpo 100.0 6.3E-42 1.4E-46 381.2 27.3 222 1053-1288 3-230 (241)
170 PRK13647 cbiO cobalt transport 100.0 4.8E-42 1E-46 388.5 26.3 214 1053-1279 4-226 (274)
171 COG3842 PotA ABC-type spermidi 100.0 1.1E-42 2.5E-47 391.6 20.1 214 1053-1282 5-228 (352)
172 PRK11153 metN DL-methionine tr 100.0 6.2E-42 1.3E-46 398.4 26.9 217 1054-1281 2-231 (343)
173 PRK13637 cbiO cobalt transport 100.0 5.6E-42 1.2E-46 390.3 25.6 219 1054-1281 3-235 (287)
174 PRK13643 cbiO cobalt transport 100.0 7.6E-42 1.6E-46 389.4 26.4 217 1054-1281 2-234 (288)
175 PRK11650 ugpC glycerol-3-phosp 100.0 8E-42 1.7E-46 397.5 26.6 215 1053-1282 3-226 (356)
176 PRK14269 phosphate ABC transpo 100.0 5.9E-42 1.3E-46 382.9 24.5 218 1053-1281 2-231 (246)
177 COG1118 CysA ABC-type sulfate/ 100.0 1.2E-42 2.6E-47 370.3 17.8 212 308-535 2-229 (345)
178 cd03261 ABC_Org_Solvent_Resist 100.0 3.7E-42 8.1E-47 382.2 22.4 213 309-535 1-228 (235)
179 PRK11432 fbpC ferric transport 100.0 7.2E-42 1.6E-46 396.5 25.7 214 1053-1282 6-228 (351)
180 TIGR01186 proV glycine betaine 100.0 7E-42 1.5E-46 396.1 25.0 201 1070-1281 7-220 (363)
181 PRK13635 cbiO cobalt transport 100.0 1E-41 2.2E-46 386.6 25.8 218 1053-1282 5-231 (279)
182 PRK13642 cbiO cobalt transport 100.0 1.4E-41 2.9E-46 385.8 26.8 220 1053-1283 4-232 (277)
183 cd03248 ABCC_TAP TAP, the Tran 100.0 8.3E-42 1.8E-46 377.2 24.2 217 306-522 9-226 (226)
184 cd03256 ABC_PhnC_transporter A 100.0 9.7E-42 2.1E-46 380.9 24.7 214 1054-1280 1-234 (241)
185 PRK09536 btuD corrinoid ABC tr 100.0 9E-42 1.9E-46 399.9 25.5 222 1053-1289 3-236 (402)
186 cd03219 ABC_Mj1267_LivG_branch 100.0 7.9E-42 1.7E-46 380.2 23.8 218 1054-1281 1-233 (236)
187 PRK13646 cbiO cobalt transport 100.0 9.3E-42 2E-46 388.7 24.9 223 1053-1282 2-237 (286)
188 cd03296 ABC_CysA_sulfate_impor 100.0 1.5E-41 3.3E-46 378.1 25.8 212 1054-1281 3-227 (239)
189 TIGR03265 PhnT2 putative 2-ami 100.0 9E-42 1.9E-46 396.6 24.8 214 1053-1282 4-226 (353)
190 PRK13650 cbiO cobalt transport 100.0 9.1E-42 2E-46 387.3 24.0 216 308-534 4-230 (279)
191 TIGR00960 3a0501s02 Type II (G 100.0 7E-42 1.5E-46 375.1 22.0 204 1054-1269 2-216 (216)
192 cd03224 ABC_TM1139_LivF_branch 100.0 1.4E-41 3E-46 374.6 24.4 214 1054-1280 1-221 (222)
193 cd03258 ABC_MetN_methionine_tr 100.0 1.5E-41 3.3E-46 376.9 24.8 217 1054-1281 2-231 (233)
194 PRK13636 cbiO cobalt transport 100.0 1.9E-41 4E-46 385.6 26.1 217 1053-1282 5-233 (283)
195 PRK11650 ugpC glycerol-3-phosp 100.0 1.2E-41 2.6E-46 396.1 24.2 213 308-535 3-226 (356)
196 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.1E-40 2.3E-45 376.0 31.2 220 1050-1289 36-256 (282)
197 cd03260 ABC_PstB_phosphate_tra 100.0 8E-42 1.7E-46 377.6 21.6 210 309-530 1-226 (227)
198 TIGR02315 ABC_phnC phosphonate 100.0 1.9E-41 4.2E-46 378.8 24.6 213 1054-1279 2-234 (243)
199 cd03250 ABCC_MRP_domain1 Domai 100.0 2.3E-41 5E-46 367.3 24.5 201 1054-1268 1-204 (204)
200 PRK13634 cbiO cobalt transport 100.0 2.3E-41 5E-46 385.9 25.6 218 1054-1281 3-236 (290)
201 PRK10851 sulfate/thiosulfate t 100.0 1.9E-41 4.1E-46 393.9 25.3 213 1053-1281 2-227 (353)
202 cd03369 ABCC_NFT1 Domain 2 of 100.0 3.8E-41 8.3E-46 366.5 25.8 204 1051-1275 4-207 (207)
203 PRK13633 cobalt transporter AT 100.0 3.3E-41 7.2E-46 383.2 25.7 219 1053-1282 4-235 (280)
204 PRK14273 phosphate ABC transpo 100.0 4E-41 8.7E-46 378.3 26.0 218 1053-1281 7-239 (254)
205 cd03259 ABC_Carb_Solutes_like 100.0 1.9E-41 4.2E-46 370.7 22.8 204 1054-1273 1-213 (213)
206 TIGR00972 3a0107s01c2 phosphat 100.0 3.6E-41 7.9E-46 377.0 25.2 217 1054-1281 2-233 (247)
207 cd03291 ABCC_CFTR1 The CFTR su 100.0 1E-40 2.2E-45 376.1 29.0 240 283-542 16-256 (282)
208 PRK13651 cobalt transporter AT 100.0 3.7E-41 7.9E-46 385.0 25.7 218 1053-1281 2-255 (305)
209 TIGR03258 PhnT 2-aminoethylpho 100.0 2.4E-41 5.3E-46 393.2 24.6 215 1052-1282 4-230 (362)
210 PRK10744 pstB phosphate transp 100.0 4.6E-41 1E-45 378.7 25.9 220 1051-1281 11-245 (260)
211 PRK11432 fbpC ferric transport 100.0 1.8E-41 3.8E-46 393.3 23.1 212 308-535 6-228 (351)
212 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.4E-41 5.3E-46 382.1 23.6 219 1055-1287 26-258 (269)
213 cd03266 ABC_NatA_sodium_export 100.0 3.6E-41 7.8E-46 370.1 24.4 208 1054-1273 2-218 (218)
214 PRK09452 potA putrescine/sperm 100.0 4.5E-41 9.8E-46 392.2 26.6 214 1053-1282 14-236 (375)
215 cd03263 ABC_subfamily_A The AB 100.0 2.6E-41 5.6E-46 371.8 23.2 211 1054-1278 1-219 (220)
216 PRK13652 cbiO cobalt transport 100.0 5.2E-41 1.1E-45 381.0 26.3 217 1054-1283 4-230 (277)
217 PRK14242 phosphate transporter 100.0 3.4E-41 7.4E-46 378.8 24.4 218 1053-1281 6-238 (253)
218 PRK11629 lolD lipoprotein tran 100.0 4E-41 8.7E-46 373.2 24.5 211 1053-1274 5-228 (233)
219 cd03226 ABC_cobalt_CbiO_domain 100.0 1.8E-41 3.9E-46 368.5 21.2 200 1055-1270 1-205 (205)
220 PRK14269 phosphate ABC transpo 100.0 2.9E-41 6.4E-46 377.3 23.0 217 308-534 2-231 (246)
221 cd03369 ABCC_NFT1 Domain 2 of 100.0 5.9E-41 1.3E-45 365.0 24.8 203 307-528 5-207 (207)
222 PRK13632 cbiO cobalt transport 100.0 6.1E-41 1.3E-45 379.5 25.8 218 1053-1282 7-233 (271)
223 cd03265 ABC_DrrA DrrA is the A 100.0 4.3E-41 9.3E-46 369.7 23.9 210 1054-1278 1-219 (220)
224 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 7.1E-41 1.5E-45 372.0 25.8 217 1054-1281 2-222 (236)
225 PRK13644 cbiO cobalt transport 100.0 7E-41 1.5E-45 379.0 26.1 215 1054-1281 2-225 (274)
226 cd03268 ABC_BcrA_bacitracin_re 100.0 4.2E-41 9.2E-46 366.6 23.2 204 1054-1273 1-208 (208)
227 PRK11000 maltose/maltodextrin 100.0 5.6E-41 1.2E-45 393.3 25.7 213 1053-1281 3-224 (369)
228 cd03295 ABC_OpuCA_Osmoprotecti 100.0 4.2E-41 9.1E-46 375.3 23.4 217 1054-1281 1-226 (242)
229 cd03218 ABC_YhbG The ABC trans 100.0 5.8E-41 1.2E-45 372.2 24.4 217 1054-1280 1-222 (232)
230 PRK13537 nodulation ABC transp 100.0 5.1E-41 1.1E-45 384.9 24.6 215 1052-1281 6-228 (306)
231 TIGR01186 proV glycine betaine 100.0 1.6E-41 3.4E-46 393.2 20.5 202 323-535 5-221 (363)
232 PRK13647 cbiO cobalt transport 100.0 3.5E-41 7.6E-46 381.5 22.9 211 308-531 4-225 (274)
233 PRK10575 iron-hydroxamate tran 100.0 6.5E-41 1.4E-45 378.3 24.6 222 1053-1289 11-245 (265)
234 PRK13637 cbiO cobalt transport 100.0 8.4E-41 1.8E-45 380.7 25.6 217 309-534 3-235 (287)
235 PRK11231 fecE iron-dicitrate t 100.0 7.4E-41 1.6E-45 376.1 24.9 223 1054-1291 3-237 (255)
236 PRK11831 putative ABC transpor 100.0 8.8E-41 1.9E-45 377.8 25.6 224 1053-1290 7-244 (269)
237 TIGR03265 PhnT2 putative 2-ami 100.0 3.1E-41 6.8E-46 392.0 22.4 212 308-535 4-226 (353)
238 cd03250 ABCC_MRP_domain1 Domai 100.0 6E-41 1.3E-45 364.0 23.2 200 309-521 1-204 (204)
239 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.8E-41 8.3E-46 369.9 21.8 205 1054-1269 1-218 (218)
240 PRK15079 oligopeptide ABC tran 100.0 1.1E-40 2.3E-45 384.7 26.5 225 1053-1287 8-259 (331)
241 TIGR03005 ectoine_ehuA ectoine 100.0 7.3E-41 1.6E-45 375.7 24.5 214 1054-1281 1-237 (252)
242 PRK13640 cbiO cobalt transport 100.0 1.1E-40 2.4E-45 379.0 26.3 218 1052-1281 4-233 (282)
243 PRK11153 metN DL-methionine tr 100.0 6.5E-41 1.4E-45 389.8 24.7 215 309-534 2-231 (343)
244 PRK09493 glnQ glutamine ABC tr 100.0 9.4E-41 2E-45 372.2 24.9 214 1054-1281 2-226 (240)
245 PRK14235 phosphate transporter 100.0 8.7E-41 1.9E-45 377.4 24.9 220 1051-1281 17-252 (267)
246 PRK13646 cbiO cobalt transport 100.0 8.6E-41 1.9E-45 380.7 24.8 221 308-535 2-237 (286)
247 PRK14267 phosphate ABC transpo 100.0 9.3E-41 2E-45 375.3 24.6 219 1053-1282 4-239 (253)
248 PRK11264 putative amino-acid A 100.0 2.4E-40 5.1E-45 371.5 27.7 214 1054-1281 4-234 (250)
249 PRK13643 cbiO cobalt transport 100.0 8.4E-41 1.8E-45 380.9 24.3 216 309-534 2-234 (288)
250 PRK14250 phosphate ABC transpo 100.0 1.4E-40 3E-45 370.5 25.2 215 308-535 3-223 (241)
251 PRK13638 cbiO cobalt transport 100.0 1.2E-40 2.6E-45 377.4 25.1 215 1054-1282 2-227 (271)
252 cd03264 ABC_drug_resistance_li 100.0 7.4E-41 1.6E-45 365.6 22.5 203 1054-1273 1-211 (211)
253 PRK13648 cbiO cobalt transport 100.0 1.5E-40 3.3E-45 376.1 25.9 218 1053-1282 7-233 (269)
254 PRK10619 histidine/lysine/argi 100.0 1.3E-40 2.7E-45 374.7 24.9 217 1052-1281 4-242 (257)
255 PRK11124 artP arginine transpo 100.0 1.2E-40 2.7E-45 371.7 24.6 215 1053-1281 2-231 (242)
256 TIGR02211 LolD_lipo_ex lipopro 100.0 1.1E-40 2.4E-45 367.1 23.8 206 1054-1270 2-220 (221)
257 cd03301 ABC_MalK_N The N-termi 100.0 7.9E-41 1.7E-45 366.0 22.5 204 1054-1273 1-213 (213)
258 PRK11614 livF leucine/isoleuci 100.0 2.7E-40 5.9E-45 367.7 27.0 215 1053-1281 5-227 (237)
259 cd03219 ABC_Mj1267_LivG_branch 100.0 5.4E-41 1.2E-45 373.4 21.3 220 309-533 1-232 (236)
260 PRK13634 cbiO cobalt transport 100.0 1.3E-40 2.8E-45 379.8 24.6 216 309-534 3-236 (290)
261 PRK13641 cbiO cobalt transport 100.0 1.8E-40 4E-45 378.2 25.8 218 1053-1281 2-235 (287)
262 PRK14273 phosphate ABC transpo 100.0 1.2E-40 2.5E-45 374.6 23.8 217 308-534 7-239 (254)
263 PRK14242 phosphate transporter 100.0 1.1E-40 2.3E-45 374.8 23.3 217 308-534 6-238 (253)
264 PRK13645 cbiO cobalt transport 100.0 2E-40 4.4E-45 378.9 25.9 221 1051-1281 4-241 (289)
265 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.1E-40 2.5E-45 366.4 22.9 206 1054-1275 1-218 (220)
266 TIGR02769 nickel_nikE nickel i 100.0 2.6E-40 5.6E-45 373.4 26.4 225 1053-1287 2-247 (265)
267 PRK09452 potA putrescine/sperm 100.0 1.1E-40 2.4E-45 389.0 24.1 212 308-535 14-236 (375)
268 TIGR03410 urea_trans_UrtE urea 100.0 2E-40 4.3E-45 367.3 24.9 213 1054-1279 1-220 (230)
269 PRK13649 cbiO cobalt transport 100.0 3.7E-40 8E-45 375.5 27.9 218 1054-1281 3-235 (280)
270 PRK13635 cbiO cobalt transport 100.0 1.8E-40 3.8E-45 376.5 25.0 216 308-535 5-231 (279)
271 PRK10744 pstB phosphate transp 100.0 1.5E-40 3.2E-45 374.6 24.2 219 306-534 11-245 (260)
272 PRK11247 ssuB aliphatic sulfon 100.0 1.9E-40 4.2E-45 370.4 24.9 205 1053-1276 12-219 (257)
273 PRK10070 glycine betaine trans 100.0 1.6E-40 3.4E-45 389.1 25.3 201 1070-1281 42-255 (400)
274 TIGR02673 FtsE cell division A 100.0 9.7E-41 2.1E-45 365.6 22.1 202 1054-1268 2-214 (214)
275 TIGR00972 3a0107s01c2 phosphat 100.0 9.9E-41 2.1E-45 373.5 22.6 216 309-534 2-233 (247)
276 cd03292 ABC_FtsE_transporter F 100.0 1.3E-40 2.9E-45 364.7 23.2 203 1054-1269 1-214 (214)
277 TIGR00960 3a0501s02 Type II (G 100.0 5.1E-41 1.1E-45 368.3 19.7 202 309-522 2-216 (216)
278 PRK14247 phosphate ABC transpo 100.0 2.4E-40 5.3E-45 371.2 25.5 218 1053-1281 3-235 (250)
279 cd03290 ABCC_SUR1_N The SUR do 100.0 2.5E-40 5.4E-45 363.1 25.0 211 1055-1268 2-218 (218)
280 PRK11607 potG putrescine trans 100.0 2.5E-40 5.4E-45 386.9 26.5 215 1052-1282 18-241 (377)
281 TIGR01288 nodI ATP-binding ABC 100.0 1.7E-40 3.8E-45 381.4 24.8 214 1053-1281 4-225 (303)
282 PRK14237 phosphate transporter 100.0 2.3E-40 4.9E-45 374.0 25.3 219 1052-1281 19-252 (267)
283 PRK10851 sulfate/thiosulfate t 100.0 1.3E-40 2.7E-45 387.0 23.7 212 308-535 2-228 (353)
284 PRK13639 cbiO cobalt transport 100.0 2.5E-40 5.5E-45 375.0 25.6 215 1054-1281 2-227 (275)
285 PRK13548 hmuV hemin importer A 100.0 3.4E-40 7.3E-45 370.7 26.4 215 1053-1281 2-231 (258)
286 TIGR03258 PhnT 2-aminoethylpho 100.0 8.9E-41 1.9E-45 388.5 22.3 213 307-535 4-230 (362)
287 TIGR00968 3a0106s01 sulfate AB 100.0 2.7E-40 5.9E-45 367.1 25.3 212 1054-1281 1-221 (237)
288 COG1118 CysA ABC-type sulfate/ 100.0 6.8E-41 1.5E-45 357.0 19.4 214 1053-1282 2-229 (345)
289 cd03256 ABC_PhnC_transporter A 100.0 1E-40 2.2E-45 372.6 21.9 211 309-532 1-233 (241)
290 cd03225 ABC_cobalt_CbiO_domain 100.0 1.3E-40 2.8E-45 363.8 22.2 202 1055-1268 1-211 (211)
291 PRK14236 phosphate transporter 100.0 2.5E-40 5.5E-45 374.7 25.3 220 1051-1281 23-257 (272)
292 PRK11308 dppF dipeptide transp 100.0 3.6E-40 7.9E-45 380.1 27.0 226 1053-1288 5-253 (327)
293 cd03296 ABC_CysA_sulfate_impor 100.0 1.4E-40 3E-45 370.4 22.7 210 309-534 3-227 (239)
294 PRK14268 phosphate ABC transpo 100.0 3.1E-40 6.8E-45 371.5 25.6 218 1053-1281 12-243 (258)
295 TIGR03411 urea_trans_UrtD urea 100.0 2.2E-40 4.8E-45 369.8 24.2 212 1054-1280 3-231 (242)
296 PRK14259 phosphate ABC transpo 100.0 3.3E-40 7.2E-45 372.8 25.8 219 1052-1281 12-254 (269)
297 PRK14239 phosphate transporter 100.0 3.3E-40 7.2E-45 370.8 25.6 218 1053-1281 5-237 (252)
298 cd03235 ABC_Metallic_Cations A 100.0 1.2E-40 2.6E-45 364.4 21.4 199 1055-1273 1-213 (213)
299 PRK14251 phosphate ABC transpo 100.0 2.1E-40 4.6E-45 371.9 24.0 219 1053-1282 4-237 (251)
300 PRK13642 cbiO cobalt transport 100.0 2.9E-40 6.4E-45 374.9 25.3 218 308-536 4-232 (277)
301 PRK14274 phosphate ABC transpo 100.0 3.3E-40 7.2E-45 371.7 25.5 218 1053-1281 12-244 (259)
302 PRK14240 phosphate transporter 100.0 3.7E-40 8E-45 369.7 25.8 219 1052-1281 2-235 (250)
303 TIGR03873 F420-0_ABC_ATP propo 100.0 2.7E-40 5.8E-45 371.8 24.7 214 1054-1281 2-227 (256)
304 TIGR02315 ABC_phnC phosphonate 100.0 1.5E-40 3.2E-45 371.6 22.4 210 309-531 2-233 (243)
305 TIGR03415 ABC_choXWV_ATP choli 100.0 2.6E-40 5.7E-45 384.3 24.9 209 1070-1289 38-264 (382)
306 cd03259 ABC_Carb_Solutes_like 100.0 1.1E-40 2.4E-45 364.7 20.6 202 309-526 1-213 (213)
307 PRK13651 cobalt transporter AT 100.0 2.3E-40 5.1E-45 378.4 24.1 216 309-534 3-255 (305)
308 cd03263 ABC_subfamily_A The AB 100.0 1.5E-40 3.3E-45 365.7 21.6 210 309-531 1-219 (220)
309 PRK09536 btuD corrinoid ABC tr 100.0 1.6E-40 3.5E-45 389.3 23.1 220 308-542 3-236 (402)
310 PRK14271 phosphate ABC transpo 100.0 7E-40 1.5E-44 370.9 27.3 233 1053-1296 21-269 (276)
311 cd03224 ABC_TM1139_LivF_branch 100.0 1.3E-40 2.8E-45 367.0 20.7 215 309-532 1-220 (222)
312 PRK14245 phosphate ABC transpo 100.0 2.9E-40 6.3E-45 370.4 23.9 218 1053-1281 3-235 (250)
313 PRK10253 iron-enterobactin tra 100.0 4.7E-40 1E-44 371.3 25.7 216 1052-1281 6-234 (265)
314 PRK14249 phosphate ABC transpo 100.0 4.3E-40 9.3E-45 369.3 25.2 218 1053-1281 4-236 (251)
315 PRK15112 antimicrobial peptide 100.0 6.2E-40 1.3E-44 370.5 26.7 231 1053-1294 4-255 (267)
316 PRK11300 livG leucine/isoleuci 100.0 4.7E-40 1E-44 370.2 25.5 221 1053-1281 5-244 (255)
317 PRK14244 phosphate ABC transpo 100.0 1.7E-40 3.7E-45 372.5 21.8 217 1054-1281 6-238 (251)
318 PRK13536 nodulation factor exp 100.0 3.1E-40 6.8E-45 381.7 24.5 214 1053-1281 41-262 (340)
319 PRK14248 phosphate ABC transpo 100.0 4E-40 8.6E-45 372.8 24.9 218 1053-1281 21-253 (268)
320 PRK10908 cell division protein 100.0 4E-40 8.6E-45 362.6 24.1 205 1054-1271 2-217 (222)
321 cd03226 ABC_cobalt_CbiO_domain 100.0 1.5E-40 3.3E-45 361.1 20.5 198 310-523 1-205 (205)
322 PRK14262 phosphate ABC transpo 100.0 4.1E-40 8.8E-45 369.4 24.5 218 1053-1281 3-235 (250)
323 PRK13636 cbiO cobalt transport 100.0 3.6E-40 7.8E-45 375.0 24.4 214 308-534 5-232 (283)
324 cd03269 ABC_putative_ATPase Th 100.0 2.4E-40 5.3E-45 361.2 22.0 202 1054-1273 1-210 (210)
325 PRK14256 phosphate ABC transpo 100.0 6.2E-40 1.3E-44 368.2 25.9 219 1052-1281 3-237 (252)
326 PRK10584 putative ABC transpor 100.0 4.7E-40 1E-44 363.7 24.5 209 1053-1272 6-227 (228)
327 cd03258 ABC_MetN_methionine_tr 100.0 2.3E-40 4.9E-45 367.5 22.0 214 309-533 2-230 (233)
328 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.3E-40 7.1E-45 366.6 23.3 215 309-534 2-222 (236)
329 PRK11000 maltose/maltodextrin 100.0 2.1E-40 4.6E-45 388.4 22.9 211 308-534 3-224 (369)
330 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.5E-40 3.2E-45 365.3 20.1 203 309-522 1-218 (218)
331 PRK10771 thiQ thiamine transpo 100.0 8.3E-40 1.8E-44 362.4 26.3 211 1054-1282 2-221 (232)
332 PRK14235 phosphate transporter 100.0 3.4E-40 7.4E-45 372.6 23.5 218 307-534 18-252 (267)
333 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.7E-40 1E-44 359.2 23.8 202 1054-1273 1-211 (211)
334 PRK10895 lipopolysaccharide AB 100.0 5.2E-40 1.1E-44 366.4 24.6 219 1053-1281 3-227 (241)
335 PRK13632 cbiO cobalt transport 100.0 5.9E-40 1.3E-44 371.5 25.3 215 308-534 7-232 (271)
336 PRK11629 lolD lipoprotein tran 100.0 2.9E-40 6.3E-45 366.3 22.3 209 308-527 5-228 (233)
337 cd03290 ABCC_SUR1_N The SUR do 100.0 4.5E-40 9.7E-45 361.1 23.5 210 310-521 2-218 (218)
338 cd03300 ABC_PotA_N PotA is an 100.0 3.3E-40 7.1E-45 365.4 22.5 212 1054-1281 1-221 (232)
339 cd03247 ABCC_cytochrome_bd The 100.0 3.5E-40 7.6E-45 349.6 21.7 178 1054-1273 1-178 (178)
340 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.7E-40 3.6E-45 370.4 20.3 213 309-534 1-226 (242)
341 PRK13644 cbiO cobalt transport 100.0 5.2E-40 1.1E-44 372.0 24.4 213 309-534 2-225 (274)
342 PRK09473 oppD oligopeptide tra 100.0 6.5E-40 1.4E-44 378.5 25.6 228 1053-1288 12-260 (330)
343 PRK14254 phosphate ABC transpo 100.0 1.1E-39 2.4E-44 370.7 27.2 219 1052-1281 38-270 (285)
344 PRK11022 dppD dipeptide transp 100.0 8.8E-40 1.9E-44 377.2 26.6 228 1053-1288 3-252 (326)
345 cd03246 ABCC_Protease_Secretio 100.0 4.2E-40 9.1E-45 347.1 21.9 173 1054-1269 1-173 (173)
346 PRK14261 phosphate ABC transpo 100.0 8.1E-40 1.8E-44 367.4 25.5 219 1053-1282 6-239 (253)
347 cd03264 ABC_drug_resistance_li 100.0 2.5E-40 5.4E-45 361.4 20.7 202 309-526 1-211 (211)
348 PRK14238 phosphate transporter 100.0 7.7E-40 1.7E-44 370.2 25.3 218 1053-1281 24-256 (271)
349 cd03262 ABC_HisP_GlnQ_permease 100.0 3.2E-40 7E-45 361.3 21.4 202 1054-1269 1-213 (213)
350 PRK10247 putative ABC transpor 100.0 5.2E-40 1.1E-44 361.9 23.1 211 1053-1276 7-223 (225)
351 PRK14243 phosphate transporter 100.0 9.6E-40 2.1E-44 368.3 25.6 218 1053-1281 10-249 (264)
352 PRK13652 cbiO cobalt transport 100.0 7.7E-40 1.7E-44 371.5 24.9 213 309-534 4-228 (277)
353 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.7E-40 3.8E-45 375.1 19.6 211 310-534 26-251 (269)
354 PRK13633 cobalt transporter AT 100.0 6E-40 1.3E-44 372.9 24.0 216 308-534 4-234 (280)
355 PRK14247 phosphate ABC transpo 100.0 5.5E-40 1.2E-44 368.3 23.3 217 308-534 3-235 (250)
356 cd03257 ABC_NikE_OppD_transpor 100.0 1.1E-39 2.4E-44 361.3 25.3 213 1054-1273 2-228 (228)
357 cd03268 ABC_BcrA_bacitracin_re 100.0 3.6E-40 7.7E-45 359.3 21.0 202 309-526 1-208 (208)
358 PRK14274 phosphate ABC transpo 100.0 6.3E-40 1.4E-44 369.5 23.6 217 308-534 12-244 (259)
359 PRK14267 phosphate ABC transpo 100.0 5.8E-40 1.3E-44 368.8 23.1 217 308-534 4-238 (253)
360 PRK14237 phosphate transporter 100.0 7.8E-40 1.7E-44 369.7 24.2 219 306-534 18-252 (267)
361 PRK14259 phosphate ABC transpo 100.0 9.3E-40 2E-44 369.2 24.7 218 307-534 12-254 (269)
362 PRK14270 phosphate ABC transpo 100.0 9.5E-40 2.1E-44 366.4 24.6 218 1053-1281 4-236 (251)
363 PRK14240 phosphate transporter 100.0 6.3E-40 1.4E-44 367.9 23.1 217 308-534 3-235 (250)
364 cd03265 ABC_DrrA DrrA is the A 100.0 4E-40 8.6E-45 362.1 21.0 208 309-531 1-219 (220)
365 PRK14253 phosphate ABC transpo 100.0 1.1E-39 2.4E-44 365.7 25.0 218 1053-1281 3-234 (249)
366 PRK14260 phosphate ABC transpo 100.0 8E-40 1.7E-44 368.4 23.8 219 1052-1281 6-244 (259)
367 cd03299 ABC_ModC_like Archeal 100.0 1.5E-39 3.2E-44 360.8 25.5 212 1054-1282 1-221 (235)
368 cd03218 ABC_YhbG The ABC trans 100.0 3.2E-40 7E-45 366.2 20.1 215 309-533 1-222 (232)
369 PRK11607 potG putrescine trans 100.0 7.2E-40 1.6E-44 383.0 23.9 213 307-535 18-241 (377)
370 PRK13640 cbiO cobalt transport 100.0 1.2E-39 2.6E-44 370.5 25.0 215 308-534 5-233 (282)
371 PRK11144 modC molybdate transp 100.0 1.2E-39 2.5E-44 380.7 25.3 212 1054-1282 2-220 (352)
372 PRK10575 iron-hydroxamate tran 100.0 5.5E-40 1.2E-44 370.7 21.9 212 308-533 11-237 (265)
373 TIGR01978 sufC FeS assembly AT 100.0 9E-40 1.9E-44 365.5 23.4 214 1054-1279 1-233 (243)
374 PRK14258 phosphate ABC transpo 100.0 1.1E-39 2.5E-44 367.3 24.3 220 1052-1281 6-246 (261)
375 PRK14236 phosphate transporter 100.0 9.1E-40 2E-44 370.1 23.6 219 306-534 23-257 (272)
376 PRK13547 hmuV hemin importer A 100.0 1.5E-39 3.3E-44 366.3 25.3 214 1054-1281 2-245 (272)
377 PRK13537 nodulation ABC transp 100.0 6.7E-40 1.5E-44 375.6 22.7 212 308-534 7-228 (306)
378 TIGR03522 GldA_ABC_ATP gliding 100.0 1E-39 2.3E-44 374.3 24.3 212 1054-1281 3-222 (301)
379 TIGR01188 drrA daunorubicin re 100.0 7.6E-40 1.6E-44 376.0 23.1 200 1070-1281 7-214 (302)
380 PRK09984 phosphonate/organopho 100.0 2E-39 4.4E-44 366.0 26.2 224 1053-1292 4-252 (262)
381 PRK14266 phosphate ABC transpo 100.0 1.5E-39 3.3E-44 364.8 25.0 218 1053-1281 3-235 (250)
382 cd03247 ABCC_cytochrome_bd The 100.0 6.2E-40 1.3E-44 347.7 20.5 178 309-526 1-178 (178)
383 cd03266 ABC_NatA_sodium_export 100.0 5.8E-40 1.3E-44 360.6 21.1 206 309-526 2-218 (218)
384 PRK14249 phosphate ABC transpo 100.0 1.1E-39 2.4E-44 365.8 23.8 217 308-534 4-236 (251)
385 PRK14239 phosphate transporter 100.0 7.7E-40 1.7E-44 367.8 22.4 217 308-534 5-237 (252)
386 PRK10070 glycine betaine trans 100.0 1.2E-39 2.6E-44 381.8 24.6 199 325-534 42-255 (400)
387 PRK14268 phosphate ABC transpo 100.0 8E-40 1.7E-44 368.2 22.3 217 308-534 12-243 (258)
388 PRK14245 phosphate ABC transpo 100.0 7.3E-40 1.6E-44 367.2 21.9 217 308-534 3-235 (250)
389 PRK15093 antimicrobial peptide 100.0 2.1E-39 4.7E-44 375.5 26.5 228 1053-1288 3-257 (330)
390 PRK13648 cbiO cobalt transport 100.0 1.2E-39 2.6E-44 368.8 23.8 215 308-534 7-232 (269)
391 PRK14241 phosphate transporter 100.0 1.4E-39 2.9E-44 366.5 24.1 218 1053-1281 4-243 (258)
392 PRK14248 phosphate ABC transpo 100.0 1E-39 2.3E-44 369.4 23.3 217 308-534 21-253 (268)
393 TIGR02211 LolD_lipo_ex lipopro 100.0 8.6E-40 1.9E-44 360.0 22.0 204 309-523 2-220 (221)
394 PRK14251 phosphate ABC transpo 100.0 6.8E-40 1.5E-44 367.8 21.6 217 308-534 4-236 (251)
395 PRK13649 cbiO cobalt transport 100.0 1.6E-39 3.4E-44 370.3 24.7 219 309-534 3-235 (280)
396 PRK10247 putative ABC transpor 100.0 9.5E-40 2.1E-44 359.8 22.0 209 308-529 7-223 (225)
397 PRK14272 phosphate ABC transpo 100.0 2E-39 4.3E-44 364.5 25.0 218 1053-1281 4-237 (252)
398 TIGR01277 thiQ thiamine ABC tr 100.0 2E-39 4.4E-44 354.4 24.4 203 1054-1274 1-212 (213)
399 COG1131 CcmA ABC-type multidru 100.0 1.2E-39 2.6E-44 369.5 23.2 215 1053-1281 4-227 (293)
400 cd03234 ABCG_White The White s 100.0 1E-39 2.2E-44 360.3 22.0 215 1054-1273 4-226 (226)
401 PRK09493 glnQ glutamine ABC tr 100.0 9.6E-40 2.1E-44 364.1 22.0 216 309-534 2-226 (240)
402 PRK15079 oligopeptide ABC tran 100.0 5E-40 1.1E-44 379.1 20.3 217 308-534 8-252 (331)
403 PRK11231 fecE iron-dicitrate t 100.0 9E-40 2E-44 367.3 21.8 211 309-533 3-227 (255)
404 PRK13641 cbiO cobalt transport 100.0 2.5E-39 5.4E-44 368.9 25.7 216 308-534 2-235 (287)
405 cd03293 ABC_NrtD_SsuB_transpor 100.0 6.3E-40 1.4E-44 360.5 19.9 204 309-528 1-218 (220)
406 PRK14264 phosphate ABC transpo 100.0 2.3E-39 5E-44 371.8 25.5 219 1052-1281 44-290 (305)
407 PRK14252 phosphate ABC transpo 100.0 2E-39 4.4E-44 366.4 24.5 220 1051-1281 14-250 (265)
408 PRK14243 phosphate transporter 100.0 1.7E-39 3.8E-44 366.2 24.0 217 308-534 10-249 (264)
409 PRK11831 putative ABC transpor 100.0 1E-39 2.2E-44 369.1 22.1 213 308-534 7-234 (269)
410 TIGR02769 nickel_nikE nickel i 100.0 1.7E-39 3.8E-44 366.7 23.8 223 309-542 3-250 (265)
411 cd03301 ABC_MalK_N The N-termi 100.0 7.1E-40 1.5E-44 358.5 20.0 202 309-526 1-213 (213)
412 PRK11614 livF leucine/isoleuci 100.0 1.2E-39 2.6E-44 362.6 22.0 217 308-533 5-226 (237)
413 TIGR03005 ectoine_ehuA ectoine 100.0 1.3E-39 2.7E-44 365.7 22.4 212 309-534 1-237 (252)
414 cd03257 ABC_NikE_OppD_transpor 100.0 7.1E-40 1.5E-44 362.7 20.1 211 309-526 2-228 (228)
415 TIGR03411 urea_trans_UrtD urea 100.0 1.6E-39 3.5E-44 362.9 23.1 220 309-533 3-231 (242)
416 PRK10895 lipopolysaccharide AB 100.0 9.2E-40 2E-44 364.4 21.0 216 308-533 3-226 (241)
417 PRK11701 phnK phosphonate C-P 100.0 3.8E-39 8.3E-44 362.9 26.2 227 1053-1289 6-251 (258)
418 PRK13645 cbiO cobalt transport 100.0 2.7E-39 5.8E-44 369.6 25.3 218 307-534 5-241 (289)
419 TIGR03410 urea_trans_UrtE urea 100.0 7.5E-40 1.6E-44 362.6 19.9 210 309-531 1-219 (230)
420 TIGR02673 FtsE cell division A 100.0 8.9E-40 1.9E-44 358.0 20.2 200 309-521 2-214 (214)
421 PRK14275 phosphate ABC transpo 100.0 2E-39 4.4E-44 369.1 23.9 218 1053-1281 39-271 (286)
422 PRK11247 ssuB aliphatic sulfon 100.0 1.6E-39 3.4E-44 363.1 22.5 203 308-529 12-219 (257)
423 PRK11264 putative amino-acid A 100.0 2.5E-39 5.3E-44 363.3 24.1 216 309-534 4-234 (250)
424 PRK14263 phosphate ABC transpo 100.0 2.8E-39 6.1E-44 363.2 24.6 219 1053-1282 8-247 (261)
425 PRK13548 hmuV hemin importer A 100.0 2.8E-39 6.1E-44 363.2 24.3 211 309-533 3-230 (258)
426 cd03225 ABC_cobalt_CbiO_domain 100.0 9.7E-40 2.1E-44 356.9 19.9 200 310-521 1-211 (211)
427 PRK14244 phosphate ABC transpo 100.0 1E-39 2.2E-44 366.3 20.5 216 309-534 6-238 (251)
428 PRK14261 phosphate ABC transpo 100.0 1.9E-39 4.1E-44 364.5 22.8 217 308-534 6-238 (253)
429 PRK14256 phosphate ABC transpo 100.0 2.4E-39 5.2E-44 363.4 23.5 218 307-534 3-237 (252)
430 cd03292 ABC_FtsE_transporter F 100.0 1.2E-39 2.6E-44 357.1 20.6 201 309-522 1-214 (214)
431 PRK14238 phosphate transporter 100.0 2.6E-39 5.6E-44 365.9 23.8 217 308-534 24-256 (271)
432 PRK14246 phosphate ABC transpo 100.0 3.5E-39 7.5E-44 361.7 24.6 225 1053-1288 10-250 (257)
433 PRK13638 cbiO cobalt transport 100.0 2.3E-39 5.1E-44 366.9 23.4 212 309-534 2-226 (271)
434 cd03246 ABCC_Protease_Secretio 100.0 1.6E-39 3.4E-44 342.8 20.4 172 309-522 1-173 (173)
435 PRK14270 phosphate ABC transpo 100.0 2.7E-39 5.9E-44 362.7 23.4 217 308-534 4-236 (251)
436 PRK14253 phosphate ABC transpo 100.0 2.5E-39 5.5E-44 362.8 23.1 216 308-533 3-233 (249)
437 PRK10619 histidine/lysine/argi 100.0 2E-39 4.3E-44 365.0 22.2 214 307-534 4-242 (257)
438 TIGR01288 nodI ATP-binding ABC 100.0 2.6E-39 5.6E-44 371.7 23.6 211 308-533 4-224 (303)
439 PRK14255 phosphate ABC transpo 100.0 3.6E-39 7.7E-44 362.2 24.2 218 1053-1281 5-237 (252)
440 PRK11124 artP arginine transpo 100.0 2.5E-39 5.3E-44 361.2 22.7 216 308-533 2-230 (242)
441 PRK14271 phosphate ABC transpo 100.0 2.8E-39 6E-44 366.1 23.4 217 308-534 21-252 (276)
442 COG0410 LivF ABC-type branched 100.0 5E-39 1.1E-43 332.8 23.1 223 1053-1283 3-229 (237)
443 PRK14265 phosphate ABC transpo 100.0 6.5E-39 1.4E-43 363.0 26.2 218 1053-1281 20-259 (274)
444 cd03235 ABC_Metallic_Cations A 100.0 1.1E-39 2.3E-44 356.9 19.2 197 310-526 1-213 (213)
445 PRK14262 phosphate ABC transpo 100.0 2E-39 4.3E-44 363.9 21.7 217 308-534 3-235 (250)
446 COG0410 LivF ABC-type branched 100.0 2.4E-39 5.2E-44 335.2 20.5 221 308-536 3-229 (237)
447 TIGR03740 galliderm_ABC gallid 100.0 4E-39 8.8E-44 354.9 23.3 206 1054-1277 1-210 (223)
448 PRK13639 cbiO cobalt transport 100.0 2.9E-39 6.2E-44 366.4 22.7 213 309-534 2-227 (275)
449 TIGR03522 GldA_ABC_ATP gliding 100.0 2.7E-39 5.9E-44 370.9 22.7 211 309-534 3-222 (301)
450 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.3E-39 7.1E-44 352.5 22.2 200 309-526 1-211 (211)
451 PRK14254 phosphate ABC transpo 100.0 4.5E-39 9.8E-44 365.8 23.9 218 307-534 38-270 (285)
452 COG4175 ProV ABC-type proline/ 100.0 1.1E-39 2.4E-44 347.2 17.5 225 308-543 4-266 (386)
453 TIGR02142 modC_ABC molybdenum 100.0 5E-39 1.1E-43 376.1 24.9 209 1058-1282 4-223 (354)
454 PRK10908 cell division protein 100.0 2.9E-39 6.3E-44 355.7 21.6 203 309-524 2-217 (222)
455 PRK10584 putative ABC transpor 100.0 4.2E-39 9.1E-44 356.2 22.9 207 308-525 6-227 (228)
456 PRK10419 nikE nickel transport 100.0 7.7E-39 1.7E-43 361.5 25.4 231 1053-1290 3-251 (268)
457 TIGR03873 F420-0_ABC_ATP propo 100.0 3.2E-39 6.8E-44 363.1 22.1 211 309-533 2-226 (256)
458 PRK10253 iron-enterobactin tra 100.0 3.2E-39 6.9E-44 364.5 22.1 213 307-533 6-233 (265)
459 PRK11308 dppF dipeptide transp 100.0 5.9E-39 1.3E-43 370.1 24.6 217 308-534 5-245 (327)
460 PRK14260 phosphate ABC transpo 100.0 4.3E-39 9.3E-44 362.5 22.9 217 308-534 7-244 (259)
461 PRK14266 phosphate ABC transpo 100.0 4.4E-39 9.5E-44 361.1 22.8 217 308-534 3-235 (250)
462 PRK11248 tauB taurine transpor 100.0 6.8E-39 1.5E-43 358.9 24.3 203 1054-1275 2-215 (255)
463 PRK13536 nodulation factor exp 100.0 4.7E-39 1E-43 371.9 23.7 212 308-534 41-262 (340)
464 TIGR02982 heterocyst_DevA ABC 100.0 6.7E-39 1.5E-43 352.1 23.8 205 1054-1269 2-219 (220)
465 TIGR03415 ABC_choXWV_ATP choli 100.0 2.6E-39 5.6E-44 376.0 21.6 201 323-534 36-255 (382)
466 PRK10771 thiQ thiamine transpo 100.0 1E-38 2.2E-43 353.8 25.1 209 309-535 2-221 (232)
467 PRK11300 livG leucine/isoleuci 100.0 4.5E-39 9.8E-44 362.2 22.6 222 308-534 5-244 (255)
468 cd03230 ABC_DR_subfamily_A Thi 100.0 5E-39 1.1E-43 338.9 21.4 171 1054-1269 1-173 (173)
469 PRK14252 phosphate ABC transpo 100.0 5.6E-39 1.2E-43 362.8 23.1 218 306-533 14-249 (265)
470 PRK11022 dppD dipeptide transp 100.0 1.1E-38 2.5E-43 368.0 25.8 218 309-534 4-244 (326)
471 PRK10418 nikD nickel transport 100.0 1.2E-38 2.7E-43 357.7 25.4 224 1053-1290 4-242 (254)
472 cd03300 ABC_PotA_N PotA is an 100.0 3.7E-39 8.1E-44 357.0 20.7 210 309-534 1-221 (232)
473 PRK14241 phosphate transporter 100.0 5.2E-39 1.1E-43 361.8 22.1 217 308-534 4-243 (258)
474 PRK14263 phosphate ABC transpo 100.0 6.7E-39 1.5E-43 360.2 22.9 217 308-534 8-246 (261)
475 PRK14275 phosphate ABC transpo 100.0 6.4E-39 1.4E-43 365.0 23.0 217 308-534 39-271 (286)
476 cd03262 ABC_HisP_GlnQ_permease 100.0 3.4E-39 7.4E-44 353.2 19.8 200 309-522 1-213 (213)
477 PRK14265 phosphate ABC transpo 100.0 1.2E-38 2.7E-43 360.7 24.9 217 308-534 20-259 (274)
478 PRK09984 phosphonate/organopho 100.0 9.3E-39 2E-43 360.6 23.6 222 308-545 4-252 (262)
479 PRK09473 oppD oligopeptide tra 100.0 1.3E-38 2.8E-43 367.6 25.0 219 308-534 12-252 (330)
480 PRK13547 hmuV hemin importer A 100.0 8E-39 1.7E-43 360.5 22.6 211 309-533 2-244 (272)
481 PRK15112 antimicrobial peptide 100.0 1.3E-38 2.9E-43 359.7 24.4 225 308-543 4-251 (267)
482 cd03269 ABC_putative_ATPase Th 100.0 3.9E-39 8.5E-44 351.7 19.4 200 309-526 1-210 (210)
483 TIGR00968 3a0106s01 sulfate AB 100.0 9.4E-39 2E-43 354.8 22.5 210 309-534 1-221 (237)
484 PRK11144 modC molybdate transp 100.0 7.6E-39 1.7E-43 373.8 22.6 210 309-535 2-220 (352)
485 PRK14258 phosphate ABC transpo 100.0 1.1E-38 2.4E-43 359.3 22.9 217 308-534 7-246 (261)
486 COG4555 NatA ABC-type Na+ tran 100.0 2.5E-39 5.4E-44 323.8 15.6 214 1054-1281 2-223 (245)
487 cd03229 ABC_Class3 This class 100.0 1E-38 2.2E-43 338.2 21.2 173 1054-1268 1-178 (178)
488 cd03233 ABC_PDR_domain1 The pl 100.0 1.5E-38 3.3E-43 343.6 23.0 192 1053-1273 3-202 (202)
489 PRK14264 phosphate ABC transpo 100.0 1.1E-38 2.4E-43 366.2 22.6 217 308-534 45-290 (305)
490 PRK00349 uvrA excinuclease ABC 100.0 1E-37 2.2E-42 395.7 33.4 105 1181-1285 818-932 (943)
491 TIGR01978 sufC FeS assembly AT 100.0 9.4E-39 2E-43 357.3 21.1 210 309-531 1-232 (243)
492 PRK14272 phosphate ABC transpo 100.0 1.1E-38 2.3E-43 358.5 21.4 217 308-534 4-237 (252)
493 TIGR01277 thiQ thiamine ABC tr 100.0 1.5E-38 3.2E-43 347.7 21.8 201 309-527 1-212 (213)
494 PRK14246 phosphate ABC transpo 100.0 2.2E-38 4.7E-43 355.2 23.5 217 308-534 10-242 (257)
495 PRK14255 phosphate ABC transpo 100.0 1.4E-38 3.1E-43 357.4 22.1 217 308-534 5-237 (252)
496 COG4555 NatA ABC-type Na+ tran 100.0 2.7E-39 5.9E-44 323.6 14.1 212 309-534 2-223 (245)
497 cd03297 ABC_ModC_molybdenum_tr 100.0 2.1E-38 4.6E-43 346.8 22.5 202 1054-1273 2-214 (214)
498 cd03234 ABCG_White The White s 100.0 9.5E-39 2.1E-43 352.5 19.8 213 309-526 4-226 (226)
499 cd03232 ABC_PDR_domain2 The pl 100.0 1.9E-38 4.1E-43 340.3 21.5 183 1053-1273 3-192 (192)
500 COG4175 ProV ABC-type proline/ 100.0 1E-38 2.2E-43 339.9 19.1 219 1053-1282 4-256 (386)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7e-211 Score=1929.10 Aligned_cols=1156 Identities=51% Similarity=0.850 Sum_probs=1060.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHH
Q 000751 28 WLSELALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSE 107 (1303)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~ 107 (1303)
-+..+++++++++++.++..|++..+|.+.++|+..++|.++++.+++++++|||.+ .+|++.+++++|++.+++++++
T Consensus 69 ~~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~-~~g~~~~~l~~d~~~I~d~~ge 147 (1228)
T KOG0055|consen 69 EVSKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTN-STGELVTRLSDDIELIQDAIGE 147 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecc-cccceEEEecCcHHHHHHHHHH
Confidence 456788999999999999999999999999999999999999999999999999996 7799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc
Q 000751 108 KVGNYIHNMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFT 187 (1303)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~ 187 (1303)
++..+++.+.+++.++++.|+..|+|+++++...|++++...++.+.+.+...+.+++++++.++++|++.++|||.+|+
T Consensus 148 Kvg~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~ 227 (1228)
T KOG0055|consen 148 KVGNFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFN 227 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHH
Q 000751 188 NETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQA 267 (1303)
Q Consensus 188 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~ 267 (1303)
.|+.+.++|.+.++...+...+...+.++..++..++.++++++.+|+|+.++.++..++|+++++++.++.....+.+.
T Consensus 228 gq~~e~~ry~~~L~~~~k~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa 307 (1228)
T KOG0055|consen 228 GEKKEIERYSKALENALKFGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQA 307 (1228)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCCCC--CCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECC
Q 000751 268 ATNFYSFDQGRIAAYRLYEMISRSSSTTNYD--GNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGR 345 (1303)
Q Consensus 268 ~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~--~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~ 345 (1303)
.+.+..+..+++|+.+|++.++..++..... +......+++|+|+||+|+||++++.++|+|+||+|++|+++|||||
T Consensus 308 ~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~ 387 (1228)
T KOG0055|consen 308 SPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGP 387 (1228)
T ss_pred ccchHHHhccccchHHHHHHhcCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECC
Confidence 9999999999999999999999876543321 22233467899999999999999989999999999999999999999
Q ss_pred CCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhc
Q 000751 346 NGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAH 424 (1303)
Q Consensus 346 sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~ 424 (1303)
|||||||+++||.|||+|++|+|++||.|+++++.+|+|++||+|+|+|.||++||+|||+||+ +++++++.+|++.++
T Consensus 388 SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~an 467 (1228)
T KOG0055|consen 388 SGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAAN 467 (1228)
T ss_pred CCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred chHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecC
Q 000751 425 AHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARR 504 (1303)
Q Consensus 425 ~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~ 504 (1303)
+++||..||+||||.+||+|..|||||||||||||||++||+||||||||||||+++|+.++++|++..+|||+|+||||
T Consensus 468 a~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHR 547 (1228)
T KOG0055|consen 468 AHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHR 547 (1228)
T ss_pred HHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCEEEEEeCceEeeccChHHHhhcChhHHHHHHHHHhccCCCCCCccCcccccccccccCccCCCCCCCCCCcc
Q 000751 505 LSLIRNADYIAVMDEGRLFEMGTHDELLATGDLYAELLKCEEAAKLPRRMPVRNYKETSTFQIEKDSSASHSFQEPSSPK 584 (1303)
Q Consensus 505 ~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (1303)
|+++++||+|+||++|+|+|.|+|+||++.+|.|.++++.|+....++..+ +.++. ..... .+. ..+.
T Consensus 548 LStIrnaD~I~v~~~G~IvE~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~--~~~~~---~~~~~----~s~-~~s~-- 615 (1228)
T KOG0055|consen 548 LSTIRNADKIAVMEEGKIVEQGTHDELIALGGIYSSLVRLQELEKAAEDEE--EEESL---KEERS----RSL-KSSS-- 615 (1228)
T ss_pred hhhhhccCEEEEEECCEEEEecCHHHHHhccchHHHHHHHHhhhhhhhccc--cccch---hhhhh----hcc-cccc--
Confidence 999999999999999999999999999999999999999987654321100 00000 00000 000 0000
Q ss_pred cCCCCccccccccCCCCCCCCCCCCCCCCCCchhhhhhcCCCCCccCCCccccccccccccCCCCCccccccccccCCCC
Q 000751 585 MLKSPSLQRVGIYRPTDGAFDSQESPKVLSPPSEKMLENGMPMDAADKEPSIRRQDSFEMRLPELPKIDVHSSNRQTSNG 664 (1303)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (1303)
. .. +..
T Consensus 616 -------------------------------~----------------~~---------------------------~~~ 621 (1228)
T KOG0055|consen 616 -------------------------------S----------------SP---------------------------SLS 621 (1228)
T ss_pred -------------------------------c----------------cc---------------------------ccc
Confidence 0 00 000
Q ss_pred CCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCcchhhhhhhccCcchHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000751 665 SDPESPISPLLTSDPKNERSHSQTFSRPHSHSDDFPTKVREEESKHQKAPSFWRLAELSFAEWLYAVLGSIGAAIFGSFN 744 (1303)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (1303)
+.. ..+.... .++.......+ . .......++++++++++++|+++++|.+++++.|+..
T Consensus 622 ~~~--~~~~~~~-------------~~~~~e~~~~~--~----~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~ 680 (1228)
T KOG0055|consen 622 RGS--NRSNLLS-------------VKPEGEDPEEP--V----SEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATY 680 (1228)
T ss_pred CCc--ccccccc-------------ccccccccccc--c----ccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhH
Confidence 000 0000000 00000000000 0 0111457899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccc
Q 000751 745 PLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFD 824 (1303)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd 824 (1303)
|++++.++.++..++..+.+ ........|++++++++++..++.+++++++.+++++++.|+|.++|+++++++++|||
T Consensus 681 P~fa~~~s~~~~~f~~~~~~-~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD 759 (1228)
T KOG0055|consen 681 PLFAYVFSQVLEAFYPPDDD-ELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFD 759 (1228)
T ss_pred HHHHHHHHHHHHHHhCCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccC
Confidence 99999999999998865422 33334445999999999999999999999999999999999999999999999999999
Q ss_pred cccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 825 EEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRG 904 (1303)
Q Consensus 825 ~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~ 904 (1303)
+++|+ |.|.+|+.+|...++..+...+..+++++..++++++++|+++|+++++++++.|++++..+.+.+++..+.++
T Consensus 760 ~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~ 838 (1228)
T KOG0055|consen 760 DPENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKD 838 (1228)
T ss_pred CCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhh
Q 000751 905 IQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVR 984 (1303)
Q Consensus 905 ~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 984 (1303)
.++...+++....|+++|++||++|+.|+++.+.|.+.+++..+...+++.+.++.+++++++.++++++.+|+|++++.
T Consensus 839 ~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~ 918 (1228)
T KOG0055|consen 839 DKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLIS 918 (1228)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccEEEEeeEEECC
Q 000751 985 DGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFCYP 1064 (1303)
Q Consensus 985 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~ 1064 (1303)
.|.+++.+.+.+++++.+....+.+...+.|++.++..++.+++++++++|+.+++.+.+...+...|+|+|+||+|+||
T Consensus 919 ~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YP 998 (1228)
T KOG0055|consen 919 NGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYP 998 (1228)
T ss_pred cCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCC
Confidence 99999999999999999999999999999999999999999999999999887766544444566789999999999999
Q ss_pred CCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceEEEccCCccCcc
Q 000751 1065 SRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFST 1144 (1303)
Q Consensus 1065 ~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~VpQdp~LF~g 1144 (1303)
++|+.+||+|+||+|++||++|+||||||||||++.+|.|||||.+|.|.|||+||+++++++||++|++|+|||.||++
T Consensus 999 sRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~ 1078 (1228)
T KOG0055|consen 999 TRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNG 1078 (1228)
T ss_pred CCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCC
Q 000751 1145 TIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIE 1224 (1303)
Q Consensus 1145 TIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD 1224 (1303)
||||||.||...++++|+.+|++.|++|+||.+||+||||.|||+|.+||||||||||||||++|||+||||||||||||
T Consensus 1079 TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALD 1158 (1228)
T KOG0055|consen 1079 TIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALD 1158 (1228)
T ss_pred cHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhh
Confidence 99999999965689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcCchhHHHHhhhhh
Q 000751 1225 SESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQPHYG 1294 (1303)
Q Consensus 1225 ~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~g~y~~l~~~~~~ 1294 (1303)
.++|+.||++|++... +||+|+|||||+||++||.|+|+++|+|+|+|||+||++++|.|++|++.|..
T Consensus 1159 seSErvVQeALd~a~~-gRT~IvIAHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~~~G~Y~~Lv~~q~~ 1227 (1228)
T KOG0055|consen 1159 SESERVVQEALDRAME-GRTTIVIAHRLSTIQNADVIAVLKNGKVVEQGTHDELLAKRGIYFRLVQLQSS 1227 (1228)
T ss_pred hhhHHHHHHHHHHhhc-CCcEEEEecchhhhhcCCEEEEEECCEEEecccHHHHHhCCCchHHHhhhccC
Confidence 9999999999999876 69999999999999999999999999999999999999999999999998753
No 2
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=9.4e-168 Score=1669.28 Aligned_cols=1171 Identities=27% Similarity=0.454 Sum_probs=966.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHH
Q 000751 31 ELALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVG 110 (1303)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~ 110 (1303)
.+++++++++++.+++.|++.+++..+++++..++|.++|++++++|+.||+.. .+|++++++++|++.+++.+...+.
T Consensus 98 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~-~~~~l~s~l~~d~~~i~~~i~~~~~ 176 (1466)
T PTZ00265 98 DIIFSLVLIGIFQFILSFISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNN-PGSKLTSDLDFYLEQVNAGIGTKFI 176 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566667777888999999999999999999999999999999999999995 8899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhH
Q 000751 111 NYIHNMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNET 190 (1303)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 190 (1303)
.++..+++++++++++|+++|+|++++++++|+++++..++.+++++..++.++..+++++.+.|.++|+++||+|+.|+
T Consensus 177 ~~~~~~~~~i~~~i~~~~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~ 256 (1466)
T PTZ00265 177 TIFTYASAFLGLYIWSLFKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEK 256 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCH
Confidence 99999999999999999999999999999999999999999999988888888888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CccHHHHHHHHHHHHHHHH
Q 000751 191 LAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHN--------KAHGGEIVTALFAVILSGL 262 (1303)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g--------~~~~g~l~~~~~~~~~~~~ 262 (1303)
.+.++|.+......+...+.....++..++..++.++++++++|+|++++.+| .+++|.+++++++.+....
T Consensus 257 ~~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~ 336 (1466)
T PTZ00265 257 TILKKFNLSEKLYSKYILKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMF 336 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHH
Confidence 99999999999999988888888888888888888889999999999999986 5788999988877777677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCC-CCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEE
Q 000751 263 GLNQAATNFYSFDQGRIAAYRLYEMISRSSSTTNY-DGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVA 341 (1303)
Q Consensus 263 ~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~-~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ 341 (1303)
.+..+.+.+..++.+.+|++||+++++.+++..+. .+...+. .+.|+|+||+|+|+++++.++|+|+||+|++||++|
T Consensus 337 ~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~~~~~~~~~~-~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~va 415 (1466)
T PTZ00265 337 MLTIILPNITEYMKSLEATNSLYEIINRKPLVENNDDGKKLKD-IKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYA 415 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCccCCC-CCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEE
Confidence 77778888899999999999999999876643221 1111122 247999999999985444579999999999999999
Q ss_pred EECCCCCcHHHHHHHHhccCCCCCcEEEE-CCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-----------
Q 000751 342 LVGRNGSGKSSIIPLMERFYDPTLGEVLL-DGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR----------- 409 (1303)
Q Consensus 342 ivG~sGsGKSTl~~ll~~~~~~~~G~i~~-~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~----------- 409 (1303)
||||||||||||+++|+|+|+|++|+|.+ ||+|+++++..++|++||||+|+|.||++||+|||.+|.
T Consensus 416 IvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~ 495 (1466)
T PTZ00265 416 FVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSN 495 (1466)
T ss_pred EECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhcc
Confidence 99999999999999999999999999999 579999999999999999999999999999999999973
Q ss_pred -----------------------------------------------CCCHHHHHHHHHHhcchHHHHhcccccCccccC
Q 000751 410 -----------------------------------------------DATLDQIEEAAKIAHAHTFISSLEKGYETQVGR 442 (1303)
Q Consensus 410 -----------------------------------------------~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~ 442 (1303)
++++++++++++.+++++|+.+||+||||.+|+
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~ 575 (1466)
T PTZ00265 496 YYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGS 575 (1466)
T ss_pred ccccccccccccccccccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCC
Confidence 246688999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccccCEEEEEeCc
Q 000751 443 AGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRNADYIAVMDEG 520 (1303)
Q Consensus 443 ~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~~d~i~~l~~G 520 (1303)
+|.+|||||||||+|||||+++|+|||||||||+||+++++.+++.|+++. +|+|+|+||||+++++.||+|++|++|
T Consensus 576 ~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g 655 (1466)
T PTZ00265 576 NASKLSGGQKQRISIARAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNR 655 (1466)
T ss_pred CCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999999999886 489999999999999999999999986
Q ss_pred -----------------------------------------------eEeeccChHHHhh-cChhHHHHHHHHHhccCCC
Q 000751 521 -----------------------------------------------RLFEMGTHDELLA-TGDLYAELLKCEEAAKLPR 552 (1303)
Q Consensus 521 -----------------------------------------------~i~~~g~~~~l~~-~~~~~~~~~~~~~~~~~~~ 552 (1303)
+|+|+|+|+||++ .+|.|+.+++.|.......
T Consensus 656 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~ 735 (1466)
T PTZ00265 656 ERGSTVDVDIIGEDPTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKS 735 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccc
Confidence 5999999999998 6899999998775332100
Q ss_pred CCCccCcccccccccccCccCCCCCCCCCCcccCCCCccccccccCCCCCCCCCCCCCCCCCCchhhhhhcCCCCCccCC
Q 000751 553 RMPVRNYKETSTFQIEKDSSASHSFQEPSSPKMLKSPSLQRVGIYRPTDGAFDSQESPKVLSPPSEKMLENGMPMDAADK 632 (1303)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (1303)
.. +..+ . ...... ...+. . .... ........... +.
T Consensus 736 ~~---~~~~-~--~~~~~~------~~~~~----~-------------~~~~---~~~~~~~~~~~------------~~ 771 (1466)
T PTZ00265 736 SN---NDND-K--DSDMKS------SAYKD----S-------------ERGY---DPDEMNGNSKH------------EN 771 (1466)
T ss_pred cc---cccc-c--cccccc------ccccc----c-------------cccc---ccccccccccc------------cc
Confidence 00 0000 0 000000 00000 0 0000 00000000000 00
Q ss_pred CccccccccccccCCCCCccccccccccCCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCcchhhhhhhccC
Q 000751 633 EPSIRRQDSFEMRLPELPKIDVHSSNRQTSNGSDPESPISPLLTSDPKNERSHSQTFSRPHSHSDDFPTKVREEESKHQK 712 (1303)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (1303)
.. .. . .. ... .......+.... . ..+...+..+.+...
T Consensus 772 ~~---~~-~-----------------------~~-~~~----~~~~~~~~~~~~----~------~~~~~~~~~~~~~~~ 809 (1466)
T PTZ00265 772 ES---AS-N-----------------------KK-SCK----MSDENASENNAG----G------KLPFLRNLFKRKPKA 809 (1466)
T ss_pred cc---cc-c-----------------------cc-ccc----cccccccchhcc----c------cchhhhhcccccccc
Confidence 00 00 0 00 000 000000000000 0 000000000000001
Q ss_pred cchHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 713 APSFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQ 792 (1303)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 792 (1303)
...++++++..++.+..++++++++++.+++.|+++++++.+++.++... ........|++++++++++.+++.+++
T Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~l~~~~~~i~~~~~~~l~ 886 (1466)
T PTZ00265 810 PNNLRIVYREIFSYKKDVTIIALSILVAGGLYPVFALLYAKYVSTLFDFA---NLEANSNKYSLYILVIAIAMFISETLK 886 (1466)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11334444444455555777888888999999999999999998766421 122334568888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 793 HFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLL 872 (1303)
Q Consensus 793 ~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~ 872 (1303)
.++..+++.++..++|.++|++++++|++|||++++++|++++|+++|++.++..+...+..++..++.+++++++++++
T Consensus 887 ~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~ 966 (1466)
T PTZ00265 887 NYYNNVIGEKVEKTMKRRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYF 966 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999877899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-------------HHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHH
Q 000751 873 EWRLALVALATLPILSLSAIAQKLWLAGFS--RG-------------IQKMHRKASLVLEDAVRNIYTVVAFCAGNKVME 937 (1303)
Q Consensus 873 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~--~~-------------~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~ 937 (1303)
+|.++++++++++++........+...... +. .++.....+..+.|++.|+++||+|+.|+++.+
T Consensus 967 ~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~ 1046 (1466)
T PTZ00265 967 CPIVAAVLTGTYFIFMRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCN 1046 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHH
Confidence 999988776555444332222111111000 00 122345567889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 000751 938 LYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYI 1017 (1303)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1017 (1303)
+|.+..+...+...+.....++++++.+++.+++.++++|+|+.++..|.+++++++.++.++.+....+.......+.+
T Consensus 1047 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~ 1126 (1466)
T PTZ00265 1047 LIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDS 1126 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888888888899999999999999999999999999999999998887766655555566677788889
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCCCC---CCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCC
Q 000751 1018 LKRRKSLISVFEIIDRVPKIDPDDSSAVK---PPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSG 1094 (1303)
Q Consensus 1018 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSG 1094 (1303)
.++..++++++++++.+++.+..+..... ++...|.|+|+||+|+||++++.+||+|+||+|+|||++||||+||||
T Consensus 1127 ~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsG 1206 (1466)
T PTZ00265 1127 ENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSG 1206 (1466)
T ss_pred HHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCC
Confidence 99999999999999876543211111111 123457899999999999776567999999999999999999999999
Q ss_pred hHHHHHHHhccccC------------------------------------------------------CccEEEECCeeC
Q 000751 1095 KSTIISLIERFYDP------------------------------------------------------VAGQVLLDGRDL 1120 (1303)
Q Consensus 1095 KSTL~~lL~rl~~~------------------------------------------------------~~G~I~idG~di 1120 (1303)
||||+++|+|||+| ++|+|+|||+||
T Consensus 1207 KSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di 1286 (1466)
T PTZ00265 1207 KSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDI 1286 (1466)
T ss_pred HHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEH
Confidence 99999999999999 699999999999
Q ss_pred CCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHH
Q 000751 1121 KLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQR 1200 (1303)
Q Consensus 1121 ~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1200 (1303)
+++++++||++|+||||||+||+|||||||.||.++++++++++||+.|++++||.+||+||||.|||+|.+||||||||
T Consensus 1287 ~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQR 1366 (1466)
T PTZ00265 1287 CDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQR 1366 (1466)
T ss_pred HhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCchhHhhcCEEEEEeC----CEE-EEecC
Q 000751 1201 IAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLI-MGNKTTILIAHRAAMMRHVDNIVVLNG----GRI-VEEGT 1274 (1303)
Q Consensus 1201 laLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~~TvI~IaHrl~ti~~~D~Iivl~~----G~I-ve~Gt 1274 (1303)
|||||||+|+|+||||||||||||++||+.|+++|++.. .+++|+|+||||++++++||+|+||++ |++ +|+|+
T Consensus 1367 IaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gt 1446 (1466)
T PTZ00265 1367 IAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGT 1446 (1466)
T ss_pred HHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecC
Confidence 999999999999999999999999999999999999874 236999999999999999999999999 995 49999
Q ss_pred hHHHhh-cCchhHHHHhhh
Q 000751 1275 HDSLLA-KNGLYVRLMQPH 1292 (1303)
Q Consensus 1275 ~~eLl~-~~g~y~~l~~~~ 1292 (1303)
|+||++ ++|.|++|++.|
T Consensus 1447 h~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1447 HEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred HHHHHhcCCChHHHHHhhc
Confidence 999998 599999999865
No 3
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-162 Score=1536.74 Aligned_cols=1093 Identities=21% Similarity=0.289 Sum_probs=843.8
Q ss_pred HHHHHHHHHHHH----HHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000751 56 LTGERQTAVIRS----RYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLAIAFVNCW 131 (1303)
Q Consensus 56 ~~~~~~~~~lr~----~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (1303)
+...++..++|. .+|+|.++++...-.. .++|+++|.+++|+++++++ ..+++.+|..+..+++.+++-|
T Consensus 264 ~~~~~~g~r~R~al~~~IY~K~L~ls~~~~~~-~t~G~ivNlms~D~~ri~~~-----~~~~h~~w~~Plqi~~~l~lLy 337 (1381)
T KOG0054|consen 264 FVSFRVGMRLRSALISAIYRKALRLSNSARGE-TTVGEIVNLMSVDAQRLSDA-----ACFLHLLWSAPLQIILALYLLY 337 (1381)
T ss_pred HHHHhhhhhHHHHHHHHHHHhhhcCchhhccC-CCcchhhhhhhhhHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666666 5677777777766545 47899999999999999986 4588899998888888888777
Q ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHH
Q 000751 132 QIALITLCTGPFIV----AAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYG 207 (1303)
Q Consensus 132 ~l~l~~l~~~p~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~ 207 (1303)
.+.....+.+.+++ .+-.++.++.++..++..+..++..+.++|.++|||+||.|+||+.+.++..+..+++.+.-
T Consensus 338 ~~LG~sa~~G~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~l 417 (1381)
T KOG0054|consen 338 GLLGPSALAGVAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLL 417 (1381)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHH
Confidence 65433222222222 23345566666667777777888889999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 208 ILISLVQGLGLGFTYGLAICSCALQLWVGRFL-VTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGRIAAYRLYE 286 (1303)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~ 286 (1303)
.+...+.++...+......+..+ +.++.+. ...+.+++...++.+.++..+..|+..++..+..+.++.+|.+|+.+
T Consensus 418 rk~~~~~~~~~~~~~~~p~lv~~--~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~ 495 (1381)
T KOG0054|consen 418 RKSAYLSALNSFLNFFSPVLVSV--VTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKE 495 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888887766555555544333 3344454 55667888899999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCCC-CCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCC
Q 000751 287 MISRSSSTTNYDG-NTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTL 365 (1303)
Q Consensus 287 ~l~~~~~~~~~~~-~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 365 (1303)
++..+........ .+..+.+..|+++|.+|+|++.+..+.|+||||+|++|+.+||||+.|||||+|+..|+|+++..+
T Consensus 496 fl~~~e~~~~~~~~~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~s 575 (1381)
T KOG0054|consen 496 FLLSEELDPDSVERSPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLS 575 (1381)
T ss_pred HhcCcccCccccccCCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCccccc
Confidence 9976532211111 112233446999999999976445569999999999999999999999999999999999999999
Q ss_pred cEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcccccCccccCCCC
Q 000751 366 GEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGL 445 (1303)
Q Consensus 366 G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~ 445 (1303)
|++.++| .++||||+||+|+|||||||+||.++++++|++++++|+|..|++.||.|+.|.|||+|.
T Consensus 576 G~v~v~g-------------siaYv~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGi 642 (1381)
T KOG0054|consen 576 GSVAVNG-------------SVAYVPQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGI 642 (1381)
T ss_pred ceEEEcC-------------eEEEeccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCcc
Confidence 9999998 499999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHH-HHHHHHhcCCCeEEEEecCCccccccCEEEEEeCceEee
Q 000751 446 ALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAV-QEALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFE 524 (1303)
Q Consensus 446 ~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i-~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~ 524 (1303)
+|||||||||+||||+|+|+||++||||+||+|+|+.+++ .++++...++||+|+|||.+++++.||+|++|+||+|.+
T Consensus 643 nLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~ 722 (1381)
T KOG0054|consen 643 NLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVE 722 (1381)
T ss_pred CCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEec
Confidence 9999999999999999999999999999999999998876 578888889999999999999999999999999999999
Q ss_pred ccChHHHhhcChhHHHHHHHHHhccCCCCCCccCcccccccccccCccCCCCCCCCCCcccCCCCccccccccCCCCCCC
Q 000751 525 MGTHDELLATGDLYAELLKCEEAAKLPRRMPVRNYKETSTFQIEKDSSASHSFQEPSSPKMLKSPSLQRVGIYRPTDGAF 604 (1303)
Q Consensus 525 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 604 (1303)
.|+|+||++.++.|.++........... ....+ .
T Consensus 723 ~Gty~el~~~~~~~~~l~~~~~~~~~~~-------------~~~~~------~--------------------------- 756 (1381)
T KOG0054|consen 723 SGTYEELLKSGGDFAELAHEEESEQEEE-------------ASEKD------L--------------------------- 756 (1381)
T ss_pred ccCHHHHHhcchhHHHHhhccchhhccc-------------ccccc------c---------------------------
Confidence 9999999998888888733221110000 00000 0
Q ss_pred CCCCCCCCCCCchhhhhhcCCCCCccCCCccccccccccccCCCCCccccccccccCCCCCCCCCCCCCCCCCCCccccc
Q 000751 605 DSQESPKVLSPPSEKMLENGMPMDAADKEPSIRRQDSFEMRLPELPKIDVHSSNRQTSNGSDPESPISPLLTSDPKNERS 684 (1303)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1303)
+..+.. ...+ . .. . . ....
T Consensus 757 ~~~~~~----~~~~-------------~-~~---~--------------------------~--------------~~~~ 775 (1381)
T KOG0054|consen 757 ESGESS----RESE-------------S-RS---L--------------------------E--------------SLSS 775 (1381)
T ss_pred cccccc----cchh-------------h-hh---h--------------------------h--------------hhcc
Confidence 000000 0000 0 00 0 0 0000
Q ss_pred ccccccCCCCCCCCCCcchhhhhhhccCcchHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Q 000751 685 HSQTFSRPHSHSDDFPTKVREEESKHQKAPSFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEER 764 (1303)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (1303)
..+. .+..........+.++.+.+..+...|+.+++... .+....+.+++......+.....+|++.|.+.-......
T Consensus 776 ~~~~-~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~-g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~ 853 (1381)
T KOG0054|consen 776 EEEK-SKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAG-GFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTT 853 (1381)
T ss_pred cccc-cccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 0000 00000000001112222333444555666655422 222222222333333333334444554444322111100
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHH
Q 000751 765 HHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFV 844 (1303)
Q Consensus 765 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i 844 (1303)
......|.++|.+++++..++.+++.+.+...+.++++++|++++++++|.||+|||. +|+|+|+|||++|++.+
T Consensus 854 ---~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdt--TP~GRILNRFSkD~~~v 928 (1381)
T KOG0054|consen 854 ---TVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDT--TPTGRILNRFSKDIDTV 928 (1381)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCC--CCccchhhhcccchHHH
Confidence 0245578999999999999999999999999999999999999999999999999995 89999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH
Q 000751 845 RAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKAS----LVLEDAV 920 (1303)
Q Consensus 845 ~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~e~l 920 (1303)
|..++..+..++..++.+++.++++.+..|+. +++.+|+.+++++++++|. ..+|+++++++..+ .++.|++
T Consensus 929 D~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~f---li~~~pl~v~~~~~~~~Y~-~tsReLkRLesitRSPi~sh~~Etl 1004 (1381)
T KOG0054|consen 929 DVLLPFTLEFFLQSLLNVLGILVVISYVTPWF---LIAIIPLGVIYYFVQRYYL-ATSRELKRLESITRSPIYSHFSETL 1004 (1381)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHH---HHHHHHHHHHHHHHHHHHH-HHhHHHHHhhhcccchHHHhHHHHh
Confidence 99999999999999999999999888888754 4455666666666665555 47999999987665 5789999
Q ss_pred hhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHH
Q 000751 921 RNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVF 1000 (1303)
Q Consensus 921 ~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~ 1000 (1303)
.|+.|||||+.+++|.+++....+.+.+..+. ......|+++..-+......+.......+...+..+.|..-....+.
T Consensus 1005 ~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~-~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsya 1083 (1381)
T KOG0054|consen 1005 QGLSTIRAFGKEERFIQENDELIDENSRAFFL-SISANRWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYA 1083 (1381)
T ss_pred cCcceeeeccccHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHH
Confidence 99999999999999999999998887765554 34444555544322222111111111112222213333222122222
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC---CCCCCCCcccEEEEeeEEECCCCCCcceeeeeeE
Q 000751 1001 SFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSS---AVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSL 1077 (1303)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl 1077 (1303)
......+...+.......+.+.+.+|+.++.+.+++ .+...+ .++.++..|+|+|+|++.+|.+.. ++|||||||
T Consensus 1084 l~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E-~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~l-p~VLk~is~ 1161 (1381)
T KOG0054|consen 1084 LQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSE-APLEIEESRPPPSWPSKGEIEFEDLSLRYRPNL-PLVLKGISF 1161 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCC-CCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCCC-cchhcCceE
Confidence 222333444455566667778899999999886554 222211 122235679999999999997653 479999999
Q ss_pred EeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCC
Q 000751 1078 KVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNA 1157 (1303)
Q Consensus 1078 ~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~ 1157 (1303)
+|+||||||||||||||||||+++|+|+.+|.+|+|.|||+||.++++++||+++++|||||+||+||||.||||.. .+
T Consensus 1162 ~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~-e~ 1240 (1381)
T KOG0054|consen 1162 TIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFD-EY 1240 (1381)
T ss_pred EEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCccc-cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999876 47
Q ss_pred CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q 000751 1158 SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDT 1237 (1303)
Q Consensus 1158 ~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~ 1237 (1303)
+|++||+|++.|+|+++|+++|+|||+.|.|+|.|||.||||++||||||||++|||+||||||++|++|+..||++|++
T Consensus 1241 sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~ 1320 (1381)
T KOG0054|consen 1241 SDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIRE 1320 (1381)
T ss_pred CHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhc-CchhHHHHhhh
Q 000751 1238 LIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAK-NGLYVRLMQPH 1292 (1303)
Q Consensus 1238 ~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~-~g~y~~l~~~~ 1292 (1303)
.|+ +||||+||||++|+.+||||+|||+|+|+|+|+|++|+++ ++.|++++.+.
T Consensus 1321 ~F~-dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~ 1375 (1381)
T KOG0054|consen 1321 EFK-DCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEA 1375 (1381)
T ss_pred Hhc-CCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHH
Confidence 987 5999999999999999999999999999999999999987 66777666543
No 4
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.5e-154 Score=1556.67 Aligned_cols=1090 Identities=19% Similarity=0.256 Sum_probs=811.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000751 55 ILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLAIAFVNCWQIA 134 (1303)
Q Consensus 55 ~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 134 (1303)
..++.++...++..+|+|+++++..++++. ++|++++++++|++++++++. .+..++...+.+++++++++ +.++
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~-~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~---~~lg 440 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKKF-TSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLY---QQLG 440 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCC-CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHH
Confidence 356777777888899999999999999884 889999999999999999874 34444444433333333332 2344
Q ss_pred HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHH
Q 000751 135 LITLCTGP---FIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILIS 211 (1303)
Q Consensus 135 l~~l~~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 211 (1303)
+++++.++ +++.+..++.++.++..++.++..++..+.+.|.++|+++||+|+||+.+.+++.+..++..+...+..
T Consensus 441 ~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~ 520 (1622)
T PLN03130 441 VASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQ 520 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33332222 233334456677777888888888999999999999999999999999999999988888777666665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 000751 212 LVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRS 291 (1303)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 291 (1303)
....+...+..... ..+.++++|++++..|.+++|.+++++.++..+..|+..++..+..+.+++++++||.++++.+
T Consensus 521 ~~~~~~~~~~~~~~--~~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~ 598 (1622)
T PLN03130 521 LLSAFNSFILNSIP--VLVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAE 598 (1622)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 55544333322221 1345567889999999999999999999999999999999999999999999999999999765
Q ss_pred CCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCC-cEEEE
Q 000751 292 SSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTL-GEVLL 370 (1303)
Q Consensus 292 ~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~-G~i~~ 370 (1303)
+........ .....+.|+++||+|+|++++++++|+|+||+|++|++++||||||||||||+++|+|+++|++ |+|.+
T Consensus 599 e~~~~~~~~-~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l 677 (1622)
T PLN03130 599 ERVLLPNPP-LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVI 677 (1622)
T ss_pred ccccccCCc-ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEE
Confidence 332111111 1112346999999999975445689999999999999999999999999999999999999999 99985
Q ss_pred CCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChH
Q 000751 371 DGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEE 450 (1303)
Q Consensus 371 ~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgG 450 (1303)
|++|+||+|+||||++||||||+||+++++++++++++.|+++++++.||+|++|.|||+|.+||||
T Consensus 678 -------------~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGG 744 (1622)
T PLN03130 678 -------------RGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGG 744 (1622)
T ss_pred -------------cCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHH
Confidence 4579999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHH-HHHHHhcCCCeEEEEecCCccccccCEEEEEeCceEeeccChH
Q 000751 451 QKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQ-EALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHD 529 (1303)
Q Consensus 451 qkqrialARal~~~~~ililDe~ts~lD~~~~~~i~-~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~ 529 (1303)
||||||||||+|++|+||||||||||||+++++++. ++++...+++|+|+||||++.++.||+|++|++|+|++.|+|+
T Consensus 745 QKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~ 824 (1622)
T PLN03130 745 QKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYE 824 (1622)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHH
Confidence 999999999999999999999999999999998775 6677777899999999999999999999999999999999999
Q ss_pred HHhhcChhHHHHHHHHHhccCCCCCCccCcccccccccccCccCCCCCCCCCCcccCCCCccccccccCCCCCCCCCCCC
Q 000751 530 ELLATGDLYAELLKCEEAAKLPRRMPVRNYKETSTFQIEKDSSASHSFQEPSSPKMLKSPSLQRVGIYRPTDGAFDSQES 609 (1303)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (1303)
||+++++.|++++..+...+.... + .. ..... + . ..
T Consensus 825 eL~~~~~~~~~l~~~~~~~~~~~~----~-~~-----~~~~~------~-------------------------~---~~ 860 (1622)
T PLN03130 825 ELSNNGPLFQKLMENAGKMEEYVE----E-NG-----EEEDD------Q-------------------------T---SS 860 (1622)
T ss_pred HHHhcchhHHHHHHhccccccccc----c-cc-----ccccc------c-------------------------c---cc
Confidence 999988999888764321100000 0 00 00000 0 0 00
Q ss_pred CCCCCCchhhhhhcCCCCCccCCCccccccccccccCCCCCccccccccccCCCCCCCCCCCCCCCCCCCcccccccccc
Q 000751 610 PKVLSPPSEKMLENGMPMDAADKEPSIRRQDSFEMRLPELPKIDVHSSNRQTSNGSDPESPISPLLTSDPKNERSHSQTF 689 (1303)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1303)
. +. . .... .. . .. . .. ..
T Consensus 861 ~----~~-~------------~~~~-----~~----------~------------~~-----------~-~~----~~-- 878 (1622)
T PLN03130 861 K----PV-A------------NGNA-----NN----------L------------KK-----------D-SS----SK-- 878 (1622)
T ss_pred c----cc-c------------cccc-----cc----------c------------cc-----------c-cc----cc--
Confidence 0 00 0 0000 00 0 00 0 00 00
Q ss_pred cCCCCCCCCCCcchhhhhhhccCcchHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHH
Q 000751 690 SRPHSHSDDFPTKVREEESKHQKAPSFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLRE 769 (1303)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (1303)
... ..........++++.+......++.+++.... ++...+.+++..+..++.....++++.|.+..... ..
T Consensus 879 ~~~-~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~------~~ 950 (1622)
T PLN03130 879 KKS-KEGKSVLIKQEERETGVVSWKVLERYKNALGG-AWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPK------TH 950 (1622)
T ss_pred ccc-cccchhhhhHHHHhcCccCHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC------CC
Confidence 000 00000000111111122223334444332211 12222222222222333333344555444422110 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHH
Q 000751 770 EVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFS 849 (1303)
Q Consensus 770 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~ 849 (1303)
....|.+++++++++..++.+++.+++.+.+.+++.++|.+++++++++|++|||. +++|+++||+++|++.++..++
T Consensus 951 ~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~--~~~G~IlnR~s~Di~~id~~l~ 1028 (1622)
T PLN03130 951 GPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHT--NPLGRIINRFAKDLGDIDRNVA 1028 (1622)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhcc--CCchHHHHHHHHHHHHHHHHHH
Confidence 13456777888888889999999999999999999999999999999999999985 7899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhHHH
Q 000751 850 NRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMH----RKASLVLEDAVRNIYT 925 (1303)
Q Consensus 850 ~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~e~l~gi~t 925 (1303)
..+..++..++.+++.++++++++|... ++++|+.+++++.+.+ +.+..++.++.. +....++.|+++|+.|
T Consensus 1029 ~~~~~~~~~~~~~i~~~i~i~~~~~~~~---~~~~pl~~~~~~~~~~-~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~t 1104 (1622)
T PLN03130 1029 VFVNMFLGQIFQLLSTFVLIGIVSTISL---WAIMPLLVLFYGAYLY-YQSTAREVKRLDSITRSPVYAQFGEALNGLST 1104 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcchHHHHHHHHhCCHHH
Confidence 9999999998888888888777776332 3334444333333333 333455555444 3455789999999999
Q ss_pred HHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCc---------cCHHHHHHH
Q 000751 926 VVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGY---------MDLPTALKE 996 (1303)
Q Consensus 926 I~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~---------~~~~~~~~~ 996 (1303)
||+|+.++++.+.+.+..+...+..+... ....|.++.. .++...++++.+...+..+. .++|.++..
T Consensus 1105 Iraf~~~~~f~~~~~~~~~~~~~~~~~~~-~~~~wl~~~l--~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~ 1181 (1622)
T PLN03130 1105 IRAYKAYDRMAEINGRSMDNNIRFTLVNM-SSNRWLAIRL--ETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSY 1181 (1622)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH--HHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHH
Confidence 99999999888888777666544433322 2222332221 11122222222223233221 122222221
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCC--CCCcccEEEEeeEEECCCCCCcceeee
Q 000751 997 YMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKP--PNVYGSIELKNVDFCYPSRPEVLVLSN 1074 (1303)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~g~I~~~~Vsf~Y~~~~~~~vL~~ 1074 (1303)
. ......+...........+...+.+|+.++++.+++.+...+...++ ++..|.|+|+||+|+|+++. ++||+|
T Consensus 1182 ~---~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~-~~VL~~ 1257 (1622)
T PLN03130 1182 A---LNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPEL-PPVLHG 1257 (1622)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCC-Cceecc
Confidence 1 11122222333344456677889999999987654332111111111 13468999999999996432 369999
Q ss_pred eeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCC
Q 000751 1075 FSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYAR 1154 (1303)
Q Consensus 1075 isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~ 1154 (1303)
+||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+|||||||+++.
T Consensus 1258 is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~ 1337 (1622)
T PLN03130 1258 LSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN 1337 (1622)
T ss_pred eeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH
Q 000751 1155 HNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEA 1234 (1303)
Q Consensus 1155 ~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~ 1234 (1303)
.++|+++|+||+.|+++++|.++|+||||+|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.|+++
T Consensus 1338 -~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~ 1416 (1622)
T PLN03130 1338 -EHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKT 1416 (1622)
T ss_pred -CCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhc-CchhHHHHhhhhh
Q 000751 1235 LDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAK-NGLYVRLMQPHYG 1294 (1303)
Q Consensus 1235 l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~-~g~y~~l~~~~~~ 1294 (1303)
|++.++ +||+|+||||++|+++||||+||++|+|+|+|+|+||+++ +|.|++|++++..
T Consensus 1417 I~~~~~-~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~~ 1476 (1622)
T PLN03130 1417 IREEFK-SCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTGA 1476 (1622)
T ss_pred HHHHCC-CCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcCh
Confidence 999865 6999999999999999999999999999999999999987 6999999976543
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.4e-153 Score=1545.68 Aligned_cols=1090 Identities=18% Similarity=0.243 Sum_probs=810.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhHHH
Q 000751 55 ILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLAIAF-VNCWQI 133 (1303)
Q Consensus 55 ~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l 133 (1303)
...+.++...++..+|+|+++++..++++. ++|++++++++|++.+++++ .. ++.++..++.+++.+ ++.+.+
T Consensus 366 ~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~-~~G~i~n~ls~Dv~~i~~~~-~~----l~~l~~~p~~ii~~~~~l~~~l 439 (1495)
T PLN03232 366 GRVGFRLRSTLVAAIFHKSLRLTHEARKNF-ASGKVTNMITTDANALQQIA-EQ----LHGLWSAPFRIIVSMVLLYQQL 439 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCC-CHHHHHHHHHHHHHHHHHHH-HH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 456777777788899999999999999884 88999999999999999875 33 333333333333322 233344
Q ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHH
Q 000751 134 ALITLCTGPFIVA---AGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILI 210 (1303)
Q Consensus 134 ~l~~l~~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 210 (1303)
++++++.++++++ +..++.++.++..++.++..++..+.+.|.++|+++||+|++|+.+.+++++..++..+...+.
T Consensus 440 g~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~ 519 (1495)
T PLN03232 440 GVASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKA 519 (1495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444333322222 3445677788888888889999999999999999999999999999999999888888777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000751 211 SLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISR 290 (1303)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~ 290 (1303)
....++...+..... ..+.++++|++++.+|.+++|.+++++.++..+..|+..++..+..+.+++++.+||.++++.
T Consensus 520 ~~~~~~~~~~~~~~~--~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~ 597 (1495)
T PLN03232 520 QLLSAFNSFILNSIP--VVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLS 597 (1495)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 665554333222211 223346789999999999999999999999999999999999999999999999999999976
Q ss_pred CCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEE
Q 000751 291 SSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLL 370 (1303)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~ 370 (1303)
+++...... ......+.|+|+|++|+|++++++++|+|+||+|++||+++||||||||||||+++|+|+|+|++|.+.
T Consensus 598 ~~~~~~~~~-~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~- 675 (1495)
T PLN03232 598 EERILAQNP-PLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV- 675 (1495)
T ss_pred ccccccccC-CcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE-
Confidence 543211111 111123469999999999754456899999999999999999999999999999999999999998763
Q ss_pred CCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChH
Q 000751 371 DGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEE 450 (1303)
Q Consensus 371 ~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgG 450 (1303)
++|++|+||+|+||||++||||||+||+++++++++++++.|+++++++.||+||+|.|||+|.+||||
T Consensus 676 -----------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGG 744 (1495)
T PLN03232 676 -----------VIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGG 744 (1495)
T ss_pred -----------EecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHH
Confidence 356789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHH-HHHHHhcCCCeEEEEecCCccccccCEEEEEeCceEeeccChH
Q 000751 451 QKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQ-EALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHD 529 (1303)
Q Consensus 451 qkqrialARal~~~~~ililDe~ts~lD~~~~~~i~-~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~ 529 (1303)
||||||||||+|++|+||||||||||||+++++++. ++++...+++|+|+||||++.++.||+|++|++|+|++.|+|+
T Consensus 745 QkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~ 824 (1495)
T PLN03232 745 QKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFA 824 (1495)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHH
Confidence 999999999999999999999999999999999885 4567677899999999999999999999999999999999999
Q ss_pred HHhhcChhHHHHHHHHHhccCCCCCCccCcccccccccccCccCCCCCCCCCCcccCCCCccccccccCCCCCCCCCCCC
Q 000751 530 ELLATGDLYAELLKCEEAAKLPRRMPVRNYKETSTFQIEKDSSASHSFQEPSSPKMLKSPSLQRVGIYRPTDGAFDSQES 609 (1303)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (1303)
|++++++.|+++++.+...+... .+. .... . ... ..
T Consensus 825 eL~~~~~~~~~l~~~~~~~~~~~-------~~~-----~~~~-----~--------------------------~~~-~~ 860 (1495)
T PLN03232 825 ELSKSGSLFKKLMENAGKMDATQ-------EVN-----TNDE-----N--------------------------ILK-LG 860 (1495)
T ss_pred HHHhcchhHHHHHHhcccccccc-------ccc-----cccc-----c--------------------------ccc-cc
Confidence 99999999998876543210000 000 0000 0 000 00
Q ss_pred CCCCCCchhhhhhcCCCCCccCCCccccccccccccCCCCCccccccccccCCCCCCCCCCCCCCCCCCCcccccccccc
Q 000751 610 PKVLSPPSEKMLENGMPMDAADKEPSIRRQDSFEMRLPELPKIDVHSSNRQTSNGSDPESPISPLLTSDPKNERSHSQTF 689 (1303)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1303)
+.. .. + . .. .... .. .
T Consensus 861 ~~~--~~------------------------------------~--~--------~~--~~~~-----~~------~--- 876 (1495)
T PLN03232 861 PTV--TI------------------------------------D--V--------SE--RNLG-----ST------K--- 876 (1495)
T ss_pred ccc--cc------------------------------------c--c--------cc--cccc-----cc------c---
Confidence 000 00 0 0 00 0000 00 0
Q ss_pred cCCCCCCCCCCcchhhhhhhccCcchHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHH
Q 000751 690 SRPHSHSDDFPTKVREEESKHQKAPSFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLRE 769 (1303)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (1303)
+....+......++++.+......++++++.... ++...+.+++..+..++.....++++.|.+ ..... ..
T Consensus 877 --~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~----~~~~~--~~ 947 (1495)
T PLN03232 877 --QGKRGRSVLVKQEERETGIISWNVLMRYNKAVGG-LWVVMILLVCYLTTEVLRVSSSTWLSIWTD----QSTPK--SY 947 (1495)
T ss_pred --ccccchhhhhhHHHHhcCcccHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----ccCCC--CC
Confidence 0000000000111111222223344444433221 122222222222222222222233333322 11000 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHH
Q 000751 770 EVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFS 849 (1303)
Q Consensus 770 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~ 849 (1303)
....|+.+|++++++..++.+++.+++...+.+++.++|.+++++++++|++||++ +++|+++||+++|++.++..++
T Consensus 948 ~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~--~~~G~ilnr~s~Di~~id~~l~ 1025 (1495)
T PLN03232 948 SPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHT--NPTGRVINRFSKDIGDIDRNVA 1025 (1495)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCc--CCchHHHHHhHhhHHHHHHHHH
Confidence 23467888889999999999999999999999999999999999999999999984 7899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhHHH
Q 000751 850 NRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMH----RKASLVLEDAVRNIYT 925 (1303)
Q Consensus 850 ~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~e~l~gi~t 925 (1303)
..+..++..++.+++++++++.+++.. +++++|+.+++.+.+.+ ..+.+++.++.. +....++.|++.|+.|
T Consensus 1026 ~~~~~~~~~~~~~i~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~t 1101 (1495)
T PLN03232 1026 NLMNMFMNQLWQLLSTFALIGTVSTIS---LWAIMPLLILFYAAYLY-YQSTSREVRRLDSVTRSPIYAQFGEALNGLSS 1101 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcChHHHHHHHHhcChHH
Confidence 998888888888887777776666532 22333444333333333 223344444433 3445778999999999
Q ss_pred HHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhh-cCccC----HHHHHHHHH-H
Q 000751 926 VVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVR-DGYMD----LPTALKEYM-V 999 (1303)
Q Consensus 926 I~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~g~~~----~~~~~~~~~-~ 999 (1303)
||+|+.++++.+.+.+..+...+..+... ....|..+.. ..++..++++.+...+. .+.++ ....+..++ +
T Consensus 1102 Iraf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~wl~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~ 1178 (1495)
T PLN03232 1102 IRAYKAYDRMAKINGKSMDNNIRFTLANT-SSNRWLTIRL--ETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSY 1178 (1495)
T ss_pred HhcCCcHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH--HHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHH
Confidence 99999999988888777666554443322 2222222221 11222222222333332 23221 111111111 1
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCC--CCCcccEEEEeeEEECCCCCCcceeeeeeE
Q 000751 1000 FSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKP--PNVYGSIELKNVDFCYPSRPEVLVLSNFSL 1077 (1303)
Q Consensus 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl 1077 (1303)
.......+.........+.....+.+|+.++.+.+++.+.......++ ++..|.|+|+||+|+|+++. ++||+|+||
T Consensus 1179 ~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~-~~vL~~isl 1257 (1495)
T PLN03232 1179 TLNITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGL-PPVLHGLSF 1257 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCC-CcccccceE
Confidence 111222333444555566778889999999987654432111111111 23458899999999996432 369999999
Q ss_pred EeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCC
Q 000751 1078 KVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNA 1157 (1303)
Q Consensus 1078 ~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~ 1157 (1303)
+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|+||||||+||+|||||||+++. ++
T Consensus 1258 ~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~ 1336 (1495)
T PLN03232 1258 FVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EH 1336 (1495)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999986 58
Q ss_pred CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q 000751 1158 SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDT 1237 (1303)
Q Consensus 1158 ~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~ 1237 (1303)
+|+|+++|++.|+++++|+++|+||||.|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.|+++|++
T Consensus 1337 sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~ 1416 (1495)
T PLN03232 1337 NDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIRE 1416 (1495)
T ss_pred CHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcC-chhHHHHhhhhh
Q 000751 1238 LIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKN-GLYVRLMQPHYG 1294 (1303)
Q Consensus 1238 ~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~-g~y~~l~~~~~~ 1294 (1303)
.++ +||+|+||||++++++||+|+||++|+|+|+|+|+||++++ |.|++|++++..
T Consensus 1417 ~~~-~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~ 1473 (1495)
T PLN03232 1417 EFK-SCTMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGP 1473 (1495)
T ss_pred HcC-CCEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhCh
Confidence 865 69999999999999999999999999999999999999986 599999986644
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=5.6e-148 Score=1498.02 Aligned_cols=1120 Identities=19% Similarity=0.239 Sum_probs=828.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-
Q 000751 54 WILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLAIAFVNCWQ- 132 (1303)
Q Consensus 54 ~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 132 (1303)
....+.++...++..+|+|+++++...+++. ++|+++|++++|++++.++.. .++.+|..++.+++.+++-|.
T Consensus 382 ~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~-~~G~i~nl~s~D~~~i~~~~~-----~~~~~~~~~~~i~~~~~ll~~~ 455 (1522)
T TIGR00957 382 CFVSGMRIKTAVMGAVYRKALVITNSARKSS-TVGEIVNLMSVDAQRFMDLAT-----YINMIWSAPLQVILALYFLWLN 455 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhhcCCC-CHHHHHHHHHHhHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH
Confidence 3456788888899999999999999999884 889999999999999987542 444444444443333333332
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHH
Q 000751 133 ---IALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGIL 209 (1303)
Q Consensus 133 ---l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 209 (1303)
.+++.++++++++.+..++.++.++..++.++..++..+.+.|.++||++||+|+||+.+.+++.+..++..+...+
T Consensus 456 ~g~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~ 535 (1522)
T TIGR00957 456 LGPSVLAGVAVMVLMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKK 535 (1522)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 22333344445555566677888888888899999999999999999999999999999999999988887776655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 210 ISLVQGLGLGFTYGLAICSCALQLWVGRFLVTH--NKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEM 287 (1303)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~--g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~ 287 (1303)
......+......... ..+.++.++.+.+.. +.++.+.+++++.++..+..|+..++..+..+.+++++.+||.++
T Consensus 536 ~~~~~~~~~~~~~~~~--~~~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~ 613 (1522)
T TIGR00957 536 SAYLHAVGTFTWVCTP--FLVALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIF 613 (1522)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555443222211111 112223345566653 568899999888888888899999999999999999999999999
Q ss_pred hccCCCCCCC-CCCCCC-CCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCC
Q 000751 288 ISRSSSTTNY-DGNTLP-SVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTL 365 (1303)
Q Consensus 288 l~~~~~~~~~-~~~~~~-~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 365 (1303)
++.+++.... ...... ...+.|+++|++|+|++ .++++|+|+||+|++|++++|+||||||||||+++|+|+++|++
T Consensus 614 l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~ 692 (1522)
T TIGR00957 614 LSHEELEPDSIERRTIKPGEGNSITVHNATFTWAR-DLPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVE 692 (1522)
T ss_pred HcCcccccccccccccCCCCCCcEEEEEeEEEcCC-CCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCC
Confidence 9765432111 001111 11236999999999963 23579999999999999999999999999999999999999999
Q ss_pred cEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcccccCccccCCCC
Q 000751 366 GEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGL 445 (1303)
Q Consensus 366 G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~ 445 (1303)
|+|.++| +|+||+|+||+|++||+|||.||.+.++++++++++.|++.+++..+|+|++|.+|++|.
T Consensus 693 G~i~~~g-------------~i~yv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~ 759 (1522)
T TIGR00957 693 GHVHMKG-------------SVAYVPQQAWIQNDSLRENILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGV 759 (1522)
T ss_pred cEEEECC-------------EEEEEcCCccccCCcHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCC
Confidence 9999997 599999999999999999999998888899999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHH---hcCCCeEEEEecCCccccccCEEEEEeCceE
Q 000751 446 ALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDL---LMLGRSTIIIARRLSLIRNADYIAVMDEGRL 522 (1303)
Q Consensus 446 ~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~---~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i 522 (1303)
+|||||||||+||||+|++|+|+|||||||+||+++++++.+.+.+ +.+++|+|+|||+++.++.||+|++|++|+|
T Consensus 760 ~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i 839 (1522)
T TIGR00957 760 NLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKI 839 (1522)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeE
Confidence 9999999999999999999999999999999999999999988853 4578999999999999999999999999999
Q ss_pred eeccChHHHhhcChhHHHHHHHHHhccCCCCCCccCcccccccccccCccCCCCCCCCCCcccCCCCccccccccCCCCC
Q 000751 523 FEMGTHDELLATGDLYAELLKCEEAAKLPRRMPVRNYKETSTFQIEKDSSASHSFQEPSSPKMLKSPSLQRVGIYRPTDG 602 (1303)
Q Consensus 523 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (1303)
++.|+|+++.++++.|.++...+....... ...+.. ... ..........
T Consensus 840 ~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~-----~~~~~~-----~~~---~~~~~~~~~~------------------ 888 (1522)
T TIGR00957 840 SEMGSYQELLQRDGAFAEFLRTYAPDEQQG-----HLEDSW-----TAL---VSGEGKEAKL------------------ 888 (1522)
T ss_pred EeeCCHHHHHhcchhHHHHHHhhccccccc-----cccccc-----ccc---cccccccccc------------------
Confidence 999999999998888888876443211000 000000 000 0000000000
Q ss_pred CCCCCCCCCCCCCchhhhhhcCCCCCccCCCccccccccccccCCCCCccccccccccCCCCCCCCCCCCCCCCCCCccc
Q 000751 603 AFDSQESPKVLSPPSEKMLENGMPMDAADKEPSIRRQDSFEMRLPELPKIDVHSSNRQTSNGSDPESPISPLLTSDPKNE 682 (1303)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1303)
.+ ..... ..... .. ...... ... ...... . . ...
T Consensus 889 -~~-~~~~~--~~~~~--------------~~-~~~~~~------------------~~~--~~~~~~-~-----~-~~~ 922 (1522)
T TIGR00957 889 -IE-NGMLV--TDVVG--------------KQ-LQRQLS------------------ASS--SDSGDQ-S-----R-HHG 922 (1522)
T ss_pred -cc-ccccc--ccccc--------------ch-hhhhcc------------------ccc--cccccc-c-----c-ccc
Confidence 00 00000 00000 00 000000 000 000000 0 0 000
Q ss_pred ccccccccCCCCCCCCCCcchhhhhhhccCcchHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 000751 683 RSHSQTFSRPHSHSDDFPTKVREEESKHQKAPSFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPE 762 (1303)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (1303)
...... ..............++++.+......++.++.... +...++.++...+..++.....++++.|.+......
T Consensus 923 ~~~~~~-~~~~~~~~~~~~~~e~~~~g~v~~~~y~~Y~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~ 999 (1522)
T TIGR00957 923 SSAELQ-KAEAKEETWKLMEADKAQTGQVELSVYWDYMKAIG--LFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNG 999 (1522)
T ss_pred cccccc-ccccccchhhhHHHHHHhcCcccHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccC
Confidence 000000 00000000000001111112223344444444322 222222222222233333344455555543211000
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHH
Q 000751 763 ERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDAT 842 (1303)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~ 842 (1303)
.......|..+|++++++..++.++..+++...+.+++.++|.+++++++++|++|||. +++|+++||+++|++
T Consensus 1000 ----~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~ilnR~s~Di~ 1073 (1522)
T TIGR00957 1000 ----TQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFER--TPSGNLVNRFSKELD 1073 (1522)
T ss_pred ----CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhcc--CChHHHHHHHHHHHH
Confidence 01112345667888888888888888888999999999999999999999999999985 789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHH
Q 000751 843 FVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMH----RKASLVLED 918 (1303)
Q Consensus 843 ~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~e 918 (1303)
.++..++..+..++..++.+++.++++++.+|.++++++++ +++..++++++. +..++.++.. +....++.|
T Consensus 1074 ~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~r~~~~~~~~~~s~l~~~~~E 1149 (1522)
T TIGR00957 1074 TVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPL---GLLYFFVQRFYV-ASSRQLKRLESVSRSPVYSHFNE 1149 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH-HHHHHHHHHHHHHhhHHHHHHHH
Confidence 99999999999999999999988888888887655444333 333333333333 3445544433 445578999
Q ss_pred HHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhh-cCccCHHHHHHHH
Q 000751 919 AVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVR-DGYMDLPTALKEY 997 (1303)
Q Consensus 919 ~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~g~~~~~~~~~~~ 997 (1303)
++.|+.|||+|++++++.+++.+..+...+..+...... .|..... ..++.+++++.+...+. .+.++.|.+....
T Consensus 1150 ~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~g~l~~~l 1226 (1522)
T TIGR00957 1150 TLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVAN-RWLAVRL--ECVGNCIVLFAALFAVISRHSLSAGLVGLSV 1226 (1522)
T ss_pred HhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 999999999999999999999888887766655433322 2222211 11122233334444443 5678888766666
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCC--CCCcccEEEEeeEEECCCCCCcceeeee
Q 000751 998 MVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKP--PNVYGSIELKNVDFCYPSRPEVLVLSNF 1075 (1303)
Q Consensus 998 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~g~I~~~~Vsf~Y~~~~~~~vL~~i 1075 (1303)
.+......++.........+.+...+.+|+.++.+.+++.+.......++ .+..|.|+|+||+|+|+++. ++||+||
T Consensus 1227 ~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~-~~vL~~i 1305 (1522)
T TIGR00957 1227 SYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDL-DLVLRHI 1305 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCC-cccccce
Confidence 65555666666777777888889999999999987654322111111111 13468999999999997653 3699999
Q ss_pred eEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCC
Q 000751 1076 SLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARH 1155 (1303)
Q Consensus 1076 sl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~ 1155 (1303)
||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+|||||||++..
T Consensus 1306 s~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~- 1384 (1522)
T TIGR00957 1306 NVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS- 1384 (1522)
T ss_pred eEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999654
Q ss_pred CCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHH
Q 000751 1156 NASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEAL 1235 (1303)
Q Consensus 1156 ~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l 1235 (1303)
+++|+|+++|++.|+++++|.++|+||||+|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.|+++|
T Consensus 1385 ~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l 1464 (1522)
T TIGR00957 1385 QYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTI 1464 (1522)
T ss_pred CCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcCchhHHHHhh
Q 000751 1236 DTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQP 1291 (1303)
Q Consensus 1236 ~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~g~y~~l~~~ 1291 (1303)
++.++ +||+|+||||++++.+||||+|||+|+|+|+|+|+||++++|.|++|+++
T Consensus 1465 ~~~~~-~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~~~~f~~l~~~ 1519 (1522)
T TIGR00957 1465 RTQFE-DCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQRGIFYSMAKD 1519 (1522)
T ss_pred HHHcC-CCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCHHHHHHHH
Confidence 98866 69999999999999999999999999999999999999999999999986
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=4.7e-141 Score=1424.71 Aligned_cols=1106 Identities=18% Similarity=0.225 Sum_probs=812.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHh--ccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 52 SCWILTGERQTAVIRSRYVQVLLNQDMSFFD--TYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLAIAFVN 129 (1303)
Q Consensus 52 ~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~--~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (1303)
+.....+.++...++..+|+|+++++...+. + .++|+++|++++|++++.+++.. +..+....+.+++++++++.+
T Consensus 307 ~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~-~~~G~i~nl~s~Dv~~i~~~~~~-~~~l~~~Pl~li~~~~lL~~~ 384 (1560)
T PTZ00243 307 YISIRCGLQYRSALNALIFEKCFTISSKSLAQPD-MNTGRIINMMSTDVERINSFMQY-CMYLWSSPMVLLLSILLLSRL 384 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCC-CCHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 3344556777777888899999999987765 3 36799999999999999998743 344444444555555555544
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHH
Q 000751 130 CWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGIL 209 (1303)
Q Consensus 130 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 209 (1303)
..+.+++.++++++.+.+..++.++..+..++..+..++..+.+.|.++|||+||.++||+.+.+++.+..++..+...+
T Consensus 385 lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~El~~l~~ 464 (1560)
T PTZ00243 385 VGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARELRYLRD 464 (1560)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555556677777777777788888889999999999999999999999999999999888887766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000751 210 ISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMIS 289 (1303)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~ 289 (1303)
......+...+......+. .++.++.+.+..+.++++.+++++.++..+..|+..++..+..+.++.+|++||.++++
T Consensus 465 ~~~~~~~~~~~~~~~p~l~--~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~~fL~ 542 (1560)
T PTZ00243 465 VQLARVATSFVNNATPTLM--IAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRISTFLE 542 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 6666655444433333332 22345678888999999999999999999999999999999999999999999999997
Q ss_pred cCCCCC-------CC--------C--C---------------CC---------------------------CCCCCccEE
Q 000751 290 RSSSTT-------NY--------D--G---------------NT---------------------------LPSVHGNIE 310 (1303)
Q Consensus 290 ~~~~~~-------~~--------~--~---------------~~---------------------------~~~~~~~i~ 310 (1303)
.++... +. . . .. .......+.
T Consensus 543 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (1560)
T PTZ00243 543 CDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPSPSVV 622 (1560)
T ss_pred Cccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccccc
Confidence 543100 00 0 0 00 000112467
Q ss_pred EEEEEEEcCCC-------------------------------------CCCCcccceeEEeeCCCEEEEECCCCCcHHHH
Q 000751 311 FRNVYFSYLSR-------------------------------------PEIPILSGFYLTVPAKKAVALVGRNGSGKSSI 353 (1303)
Q Consensus 311 ~~~v~f~y~~~-------------------------------------~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl 353 (1303)
++|++|+++.. +++++|+|+||+|++|++++|+||||||||||
T Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsGKSTL 702 (1560)
T PTZ00243 623 VEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSGKSTL 702 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCcHHHH
Confidence 88888875410 12458999999999999999999999999999
Q ss_pred HHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcc
Q 000751 354 IPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLE 433 (1303)
Q Consensus 354 ~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 433 (1303)
+++|+|+++|++|+|.++ ++|+||+|+||+|++||+|||.|+...+++++.++++.|+++++++.+|
T Consensus 703 L~~i~G~~~~~~G~i~~~-------------~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~ 769 (1560)
T PTZ00243 703 LQSLLSQFEISEGRVWAE-------------RSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLG 769 (1560)
T ss_pred HHHHhcCCCCCCcEEEEC-------------CeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhh
Confidence 999999999999999874 4799999999999999999999998777788999999999999999999
Q ss_pred cccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHH-HHHHhcCCCeEEEEecCCccccccC
Q 000751 434 KGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQE-ALDLLMLGRSTIIIARRLSLIRNAD 512 (1303)
Q Consensus 434 ~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~-~l~~~~~~~t~i~ith~~~~~~~~d 512 (1303)
+|++|.+|++|.+|||||||||+||||++++|+|||||||||+||+++++.+.+ ++....+|+|+|+|||+++.++.||
T Consensus 770 ~g~~t~i~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad 849 (1560)
T PTZ00243 770 GGLETEIGEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRAD 849 (1560)
T ss_pred ccchHHhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999887765 4445557899999999999999999
Q ss_pred EEEEEeCceEeeccChHHHhhcChhHHHHHHHHHhccCCCCCCccCcccccccccccCccCCCCCCCCCCcccCCCCccc
Q 000751 513 YIAVMDEGRLFEMGTHDELLATGDLYAELLKCEEAAKLPRRMPVRNYKETSTFQIEKDSSASHSFQEPSSPKMLKSPSLQ 592 (1303)
Q Consensus 513 ~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (1303)
+|++|++|++++.|+++++++. +.|.++........... + . +........
T Consensus 850 ~ii~l~~G~i~~~G~~~~l~~~-~~~~~~~~~~~~~~~~~-----~--~--------~~~~~~~~~-------------- 899 (1560)
T PTZ00243 850 YVVALGDGRVEFSGSSADFMRT-SLYATLAAELKENKDSK-----E--G--------DADAEVAEV-------------- 899 (1560)
T ss_pred EEEEEECCEEEEecCHHHHHhC-hHHHHHHHhhccccccc-----c--c--------ccccccccc--------------
Confidence 9999999999999999999875 45666654321110000 0 0 000000000
Q ss_pred cccccCCCCCCCCCCCCCCCCCCchhhhhhcCCCCCccCCCccccccccccccCCCCCccccccccccCCCCCCCCCCCC
Q 000751 593 RVGIYRPTDGAFDSQESPKVLSPPSEKMLENGMPMDAADKEPSIRRQDSFEMRLPELPKIDVHSSNRQTSNGSDPESPIS 672 (1303)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (1303)
+ .. .......... ... ..
T Consensus 900 --------~--~~-~~~~~~~~~~--------------------------------------------~~~-~~------ 917 (1560)
T PTZ00243 900 --------D--AA-PGGAVDHEPP--------------------------------------------VAK-QE------ 917 (1560)
T ss_pred --------c--cc-cccccccccc--------------------------------------------ccc-cc------
Confidence 0 00 0000000000 000 00
Q ss_pred CCCCCCCcccccccccccCCCCCCCCCCcchhhhhhhccCcchHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 673 PLLTSDPKNERSHSQTFSRPHSHSDDFPTKVREEESKHQKAPSFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIG 752 (1303)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1303)
...+..... .. ..........++++.+...+..+++++..... +.+.++.++..++...+.....++++
T Consensus 918 ------~~~~~~~~~--~~--~~~~~~l~~~e~~~~g~v~~~~y~~Y~~~~g~-~~~~~~~l~~~~~~~~~~~~~~~wl~ 986 (1560)
T PTZ00243 918 ------GNAEGGDGA--AL--DAAAGRLMTREEKASGSVPWSTYVAYLRFCGG-LHAAGFVLATFAVTELVTVSSGVWLS 986 (1560)
T ss_pred ------ccccccccc--cc--ccccchhhhHHHHhcCcccHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000 00 00000000111111122233344444433221 11111111111112222222233343
Q ss_pred HHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhh
Q 000751 753 LIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADT 832 (1303)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~ 832 (1303)
.|...... .....|+.+|+++.++..++.+++.+.....+.+...++|.++|++++++|+.|||. ++.|+
T Consensus 987 ~w~~~~~~--------~~~~~~l~~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~--~~~G~ 1056 (1560)
T PTZ00243 987 MWSTRSFK--------LSAATYLYVYLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDT--TPLGR 1056 (1560)
T ss_pred HhcccccC--------CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccC--CCccH
Confidence 33321110 112245666666666666666667677777778888999999999999999999985 78999
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Q 000751 833 LSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKM---- 908 (1303)
Q Consensus 833 l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~---- 908 (1303)
++||+++|++.+++.++..+..++..++.+++.++++++.+|.+. ++++|+.++...+..+ +.+..++.++.
T Consensus 1057 ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~---~~~i~~~~~~~~i~~~-~~~~~r~~~r~~~~~ 1132 (1560)
T PTZ00243 1057 ILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVL---VALVPCGYLYYRLMQF-YNSANREIRRIKSVA 1132 (1560)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999888888888887433 3334444443333333 33344555443
Q ss_pred HHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH--HhhcC
Q 000751 909 HRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGK--SVRDG 986 (1303)
Q Consensus 909 ~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~g 986 (1303)
.+....++.|++.|+.|||+|+.++.+.++|.+.++...+..+.......+......++..+..+++.+++.. ....+
T Consensus 1133 ~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 1212 (1560)
T PTZ00243 1133 KSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRAT 1212 (1560)
T ss_pred hcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 3445688999999999999999999999999999888877666554433333333333333333333333322 22334
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCC-------------------------
Q 000751 987 YMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDD------------------------- 1041 (1303)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------------------------- 1041 (1303)
.++++.+...+.+.......+.........+...+.+.+|+.++++..++++...
T Consensus 1213 ~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1292 (1560)
T PTZ00243 1213 SQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIE 1292 (1560)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccc
Confidence 4566654444444444455556666677778888999999999987544321000
Q ss_pred CCCC----CCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECC
Q 000751 1042 SSAV----KPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDG 1117 (1303)
Q Consensus 1042 ~~~~----~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG 1117 (1303)
+... +.+...|.|+|+||+|+|++.. ++||+||||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||
T Consensus 1293 ~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~-~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG 1371 (1560)
T PTZ00243 1293 PASPTSAAPHPVQAGSLVFEGVQMRYREGL-PLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNG 1371 (1560)
T ss_pred cCCCcccCCCCCCCCeEEEEEEEEEeCCCC-CceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC
Confidence 0000 0112358899999999997542 3699999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHH
Q 000751 1118 RDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQ 1197 (1303)
Q Consensus 1118 ~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1197 (1303)
+||+++++++||++|+||||||+||+|||||||+++. +++|+|+++||+.|+++++|.++|+||||.|||+|.+|||||
T Consensus 1372 ~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~-~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQ 1450 (1560)
T PTZ00243 1372 REIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFL-EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQ 1450 (1560)
T ss_pred EEcccCCHHHHHhcceEECCCCccccccHHHHhCccc-CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHH
Confidence 9999999999999999999999999999999999864 689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC-CCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChH
Q 000751 1198 KQRIAIARVVLKN-APILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHD 1276 (1303)
Q Consensus 1198 rQRlaLARAllr~-p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~ 1276 (1303)
||||||||||+++ |+|||||||||+||++||+.|+++|++.++ +||+|+||||++++.+||+|+||++|+|+|+|+|+
T Consensus 1451 rQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~~-~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~ 1529 (1560)
T PTZ00243 1451 RQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAFS-AYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPR 1529 (1560)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHCC-CCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHH
Confidence 9999999999996 899999999999999999999999998765 69999999999999999999999999999999999
Q ss_pred HHhhc-CchhHHHHhhhhh
Q 000751 1277 SLLAK-NGLYVRLMQPHYG 1294 (1303)
Q Consensus 1277 eLl~~-~g~y~~l~~~~~~ 1294 (1303)
||+++ +|.|++|++.+..
T Consensus 1530 eLl~~~~~~f~~l~~~~~~ 1548 (1560)
T PTZ00243 1530 ELVMNRQSIFHSMVEALGR 1548 (1560)
T ss_pred HHHhCCCCHHHHHHHHhCh
Confidence 99985 8999999987644
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=5.6e-139 Score=1405.48 Aligned_cols=1182 Identities=18% Similarity=0.209 Sum_probs=808.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000751 53 CWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLAIAFVNCWQ 132 (1303)
Q Consensus 53 ~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (1303)
.....+.++...+...+|+|+++++...+++. ++|++++++++|++++.+++... ..+....+.+++++++++.+..+
T Consensus 145 ~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~-~~g~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~lL~~~~G~ 222 (1490)
T TIGR01271 145 GLHHLGMQMRIALFSLIYKKTLKLSSRVLDKI-STGQLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMGLIWELLEV 222 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHhcCC-CHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445666666666677999999999999884 88999999999999999876532 22333333344444555444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 133 IALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISL 212 (1303)
Q Consensus 133 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 212 (1303)
.+++.++++++++.+..++.++..+..++.++..++..+.+.|.++|||+||+|+||+.+.+++.+..++..+...+...
T Consensus 223 ~~l~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~ 302 (1490)
T TIGR01271 223 NGFCGLGFLILLALFQACLGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAY 302 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666777777778888888888888899999999999999999999999999999999999998888887777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccC
Q 000751 213 VQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLN-QAATNFYSFDQGRIAAYRLYEMISRS 291 (1303)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~a~~ri~~~l~~~ 291 (1303)
+..+...+..+.. ..+.++.++.+.+..+ ++++.+++++.++.++..|+. .++..+..+.++.++++||.++++.+
T Consensus 303 ~~~~~~~~~~~~~--~~~~~~~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~ 379 (1490)
T TIGR01271 303 LRYFYSSAFFFSG--FFVVFLSVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKE 379 (1490)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 5544333322222 2334455667766654 678999998888888877874 68888999999999999999999765
Q ss_pred CCCCCCCCCCCCCCCccEEEEEEEEEcCCC-------------------------------CCCCcccceeEEeeCCCEE
Q 000751 292 SSTTNYDGNTLPSVHGNIEFRNVYFSYLSR-------------------------------PEIPILSGFYLTVPAKKAV 340 (1303)
Q Consensus 292 ~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~-------------------------------~~~~~l~~i~l~i~~g~~~ 340 (1303)
+..... . ......++++|++|.|+.. ..+++|+|+||+|++|+++
T Consensus 380 e~~~~~--~--~~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~ 455 (1490)
T TIGR01271 380 EYKTLE--Y--NLTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLL 455 (1490)
T ss_pred cccccc--c--cCCCCceEEecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEE
Confidence 322111 0 0112359999999999531 0136899999999999999
Q ss_pred EEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCCCCCHHHHHHHH
Q 000751 341 ALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAA 420 (1303)
Q Consensus 341 ~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~ 420 (1303)
+|+||+|||||||+++|+|+++|++|+|.++| +|+||+|+||+|++||+|||.||..++++++.+++
T Consensus 456 ~I~G~~GsGKSTLl~~l~G~~~~~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~ 522 (1490)
T TIGR01271 456 AVAGSTGSGKSSLLMMIMGELEPSEGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVI 522 (1490)
T ss_pred EEECCCCCCHHHHHHHHhCCCCCCCceEEECC-------------EEEEEeCCCccCCccHHHHHHhccccchHHHHHHH
Confidence 99999999999999999999999999999998 49999999999999999999999877888899999
Q ss_pred HHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHH-HHHHhcCCCeEE
Q 000751 421 KIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQE-ALDLLMLGRSTI 499 (1303)
Q Consensus 421 ~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~-~l~~~~~~~t~i 499 (1303)
+.|++.+++..+|+|++|.+|++|.+|||||||||+||||+|++|+|+|||||||+||+++++++.+ ++..+.+++|+|
T Consensus 523 ~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvi 602 (1490)
T TIGR01271 523 KACQLEEDIALFPEKDKTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRI 602 (1490)
T ss_pred HHHhHHHHHHhccccccccccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999987 567777899999
Q ss_pred EEecCCccccccCEEEEEeCceEeeccChHHHhhcChhHHHHHHHHHhccCCCCCCccCcccccccccccCccCCCCCCC
Q 000751 500 IIARRLSLIRNADYIAVMDEGRLFEMGTHDELLATGDLYAELLKCEEAAKLPRRMPVRNYKETSTFQIEKDSSASHSFQE 579 (1303)
Q Consensus 500 ~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (1303)
+|||+++.+..||+|++|++|+|++.|+++++.+.++.|.+.+........... ..++...++..........
T Consensus 603 lvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------ 675 (1490)
T TIGR01271 603 LVTSKLEHLKKADKILLLHEGVCYFYGTFSELQAKRPDFSSLLLGLEAFDNFSA-ERRNSILTETLRRVSIDGD------ 675 (1490)
T ss_pred EEeCChHHHHhCCEEEEEECCEEEEEcCHHHHHhcChHHHHHHhcccccccccc-ccccccccccccccccccc------
Confidence 999999999999999999999999999999999877777666542111000000 0000000000000000000
Q ss_pred CCCcccCCCCccccccccCCCCCCCCCCCCCCCCCCchhhhhhcCCCCCccCCCcc---cc----c--cccccccCCCCC
Q 000751 580 PSSPKMLKSPSLQRVGIYRPTDGAFDSQESPKVLSPPSEKMLENGMPMDAADKEPS---IR----R--QDSFEMRLPELP 650 (1303)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~--~~~~~~~~~~~~ 650 (1303)
.+.. ..+.....+ ...+......... ...........+. .. . ............
T Consensus 676 --~~~~-----------~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (1490)
T TIGR01271 676 --STVF-----------SGPETIKQS-FKQPPPEFAEKRK---QSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPS 738 (1490)
T ss_pred --cccc-----------ccccccccc-ccccccccccccc---ccccccccccccccccccccccccccccccchhcccc
Confidence 0000 000000000 0000000000000 0000000000000 00 0 000000000000
Q ss_pred ccc-----c---ccccccCCCCC--CCCCC------CCCCCCCC--Ccccc--------------------cccccccCC
Q 000751 651 KID-----V---HSSNRQTSNGS--DPESP------ISPLLTSD--PKNER--------------------SHSQTFSRP 692 (1303)
Q Consensus 651 ~~~-----~---~~~~~~~~~~~--~~~~~------~~~~~~~~--~~~~~--------------------~~~~~~~~~ 692 (1303)
..+ . ........... .++.. ........ .+... .......+.
T Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (1490)
T TIGR01271 739 ERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQTSFRKKSSITQQNELASELDIYSRR 818 (1490)
T ss_pred cccccccccccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccccccccccccc
Confidence 000 0 00000000000 00000 00000000 00000 000000000
Q ss_pred CCCC-----------CCCCcchhhhh---hhccCcchHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000751 693 HSHS-----------DDFPTKVREEE---SKHQKAPSFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAY 758 (1303)
Q Consensus 693 ~~~~-----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 758 (1303)
.... ........+++ .+...+..|++++.... .+.++++.+++.++..++..+..+|+..|....
T Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~ 897 (1490)
T TIGR01271 819 LSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNR-NLVFVLIFCLVIFLAEVAASLLGLWLITDNPSA 897 (1490)
T ss_pred ccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHhhHHHHhccccc
Confidence 0000 00000000111 12223344555544322 122222222222222333333333443332100
Q ss_pred --cC-Ccchhh-h---------HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccc
Q 000751 759 --YK-PEERHH-L---------REEVNKW-CLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFD 824 (1303)
Q Consensus 759 --~~-~~~~~~-~---------~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd 824 (1303)
+. ...... . .....+| .+++++++++..++.+++.+++.+.+.+.+.++|.+++++++++|++||+
T Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~ 977 (1490)
T TIGR01271 898 PNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLN 977 (1490)
T ss_pred ccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhC
Confidence 00 000000 0 0011122 33444444455667777888889999999999999999999999999998
Q ss_pred cccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 825 EEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRG 904 (1303)
Q Consensus 825 ~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~ 904 (1303)
. +++|+++||+++|++.+++.++..+..++..++.+++.++++++++|.+++ +++|+++++.+++.++. +.+++
T Consensus 978 ~--~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l---~~~~l~~~~~~~~~~~~-~~~r~ 1051 (1490)
T TIGR01271 978 T--MKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFI---AAIPVAVIFIMLRAYFL-RTSQQ 1051 (1490)
T ss_pred C--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH-HHHHH
Confidence 5 789999999999999999999999999999999999888888888887544 34444444333333333 34555
Q ss_pred HHHHHH----HHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHH
Q 000751 905 IQKMHR----KASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFS-QFLLFA--CNALLLW 977 (1303)
Q Consensus 905 ~~~~~~----~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~ 977 (1303)
.++... ....++.|++.|+.|||+|++++++.+++.+..+...+..+..... ..|..+. .++..+ ..+++++
T Consensus 1052 l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~wl~~~~~~i~~~~~~~~~~l~ 1130 (1490)
T TIGR01271 1052 LKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLST-LRWFQMRIDIIFVFFFIAVTFIA 1130 (1490)
T ss_pred HHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 554433 4457899999999999999999999999999888655443332222 2222211 111111 1111222
Q ss_pred HHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC-------------C
Q 000751 978 YTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSS-------------A 1044 (1303)
Q Consensus 978 ~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------------~ 1044 (1303)
++...+..|. ++.++ .+.......+.........+.....+.+|+.++.+.+++....... .
T Consensus 1131 ~~~~~~~~g~--~g~~l---~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 1205 (1490)
T TIGR01271 1131 IGTNQDGEGE--VGIIL---TLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIEN 1205 (1490)
T ss_pred HHHhcCCccH--HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccc
Confidence 2222222221 22222 1222222333444445556677788999999998655432211000 0
Q ss_pred -CCC--CCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCC
Q 000751 1045 -VKP--PNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLK 1121 (1303)
Q Consensus 1045 -~~~--~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~ 1121 (1303)
..+ ++..|.|+|+||+|+|++. .+++|+||||+|+|||+||||||||||||||+++|+|+|+ .+|+|+|||+||+
T Consensus 1206 ~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~ 1283 (1490)
T TIGR01271 1206 PHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWN 1283 (1490)
T ss_pred CCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcc
Confidence 011 1345899999999999754 3479999999999999999999999999999999999998 7999999999999
Q ss_pred CCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHH
Q 000751 1122 LYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRI 1201 (1303)
Q Consensus 1122 ~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1201 (1303)
+++++.+|++|+||||||+||+||||+||+++. .++|+++|+||+.|+++++|.++|+||||+|||+|.+|||||||||
T Consensus 1284 ~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL 1362 (1490)
T TIGR01271 1284 SVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLM 1362 (1490)
T ss_pred cCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHH
Confidence 999999999999999999999999999999875 5799999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1202 AIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1202 aLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
||||||+++|+|||||||||+||.+||+.|+++|++.++ +||||+||||++++.+||+|+||++|+|+|.|+|++|+++
T Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~-~~TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~ 1441 (1490)
T TIGR01271 1363 CLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFS-NCTVILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNE 1441 (1490)
T ss_pred HHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC-CCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcC
Confidence 999999999999999999999999999999999999866 6999999999999999999999999999999999999998
Q ss_pred CchhHHHHhhhhhccc
Q 000751 1282 NGLYVRLMQPHYGKGL 1297 (1303)
Q Consensus 1282 ~g~y~~l~~~~~~~~~ 1297 (1303)
+|.|++|++++..+..
T Consensus 1442 ~~~f~~l~~~~~~~~~ 1457 (1490)
T TIGR01271 1442 TSLFKQAMSAADRLKL 1457 (1490)
T ss_pred CcHHHHHHHHhChhcc
Confidence 9999999987766543
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.2e-108 Score=963.22 Aligned_cols=576 Identities=36% Similarity=0.572 Sum_probs=540.7
Q ss_pred hHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 715 SFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHF 794 (1303)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 794 (1303)
.+|+++.+.++.|+++..+.++..+......+.+++++.+++.++... .........+..+.++.++..++.+++.+
T Consensus 134 ~~~rl~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~---~~~~~~~~~~~~l~~l~~~~a~~~~~r~~ 210 (716)
T KOG0058|consen 134 LLKRLLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGD---DSADALKRACTILLGLFLIGALANAIRGG 210 (716)
T ss_pred HHHHHHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677899999999999999999999998889999999999999887621 11344555677888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 795 YFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEW 874 (1303)
Q Consensus 795 ~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~ 874 (1303)
++.++++++..++|..+|+++++++++|||. |.+|+|++|++.|+..+.+.++..+...+.+++..++++.++++++|
T Consensus 211 ~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~--nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~ 288 (716)
T KOG0058|consen 211 LLQYAGERVVARLRTDLFRSLLRQDIAFFDE--NKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSW 288 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc--CCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhH
Confidence 9999999999999999999999999999996 67999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Q 000751 875 RLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHG 954 (1303)
Q Consensus 875 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1303)
+|+++.++.+|++++...++.+++++.+++.++..+.++....|.+++++|||+|+.|.+..++|.+.+++..+-..+.+
T Consensus 289 ~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a 368 (716)
T KOG0058|consen 289 RLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEA 368 (716)
T ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcC
Q 000751 955 MAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRV 1034 (1303)
Q Consensus 955 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 1034 (1303)
...+++++...+...+....++++|++++..|.++.+.+..+.++..+...++.........+.++..+..|+|+++++.
T Consensus 369 ~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~ 448 (716)
T KOG0058|consen 369 VAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRK 448 (716)
T ss_pred HHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccC
Confidence 99999999999999999999999999999999999999887777777777777777788888999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEE
Q 000751 1035 PKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVL 1114 (1303)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~ 1114 (1303)
|..+++ ... .|....|.|+|+||+|+||++|+.+||||+||+|+|||.||+||||||||||++++|+|||+|++|+|+
T Consensus 449 P~i~~~-G~~-~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~Il 526 (716)
T KOG0058|consen 449 PRIPLT-GTL-APDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRIL 526 (716)
T ss_pred CCCCCC-Ccc-ccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEE
Confidence 988765 221 222578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCC
Q 000751 1115 LDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLT 1194 (1303)
Q Consensus 1115 idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1194 (1303)
+||+||++++.++||++||+|.|||+||+|||+|||.||.+++++|||.+|+++|++|+||..+|+||||.|||+|.+||
T Consensus 527 lDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLS 606 (716)
T KOG0058|consen 527 LDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLS 606 (716)
T ss_pred ECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecC
Q 000751 1195 PGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1195 gGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt 1274 (1303)
|||||||||||||+|||+||||||||||||+++|..||++|++..+ ++|||+|||||+|+++||+|+|+++|+|+|.|+
T Consensus 607 GGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~ 685 (716)
T KOG0058|consen 607 GGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGT 685 (716)
T ss_pred chHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhhHhhhccEEEEEcCCeEEeccc
Confidence 9999999999999999999999999999999999999999998866 599999999999999999999999999999999
Q ss_pred hHHHhhcC-chhHHHHhhhhhcccc
Q 000751 1275 HDSLLAKN-GLYVRLMQPHYGKGLR 1298 (1303)
Q Consensus 1275 ~~eLl~~~-g~y~~l~~~~~~~~~~ 1298 (1303)
|+||+++. |.|++|+++|......
T Consensus 686 h~eLl~~~~gly~~Lv~~q~~~~~~ 710 (716)
T KOG0058|consen 686 HDELLSKPNGLYAKLVQRQLDSGEP 710 (716)
T ss_pred HHHHhhCcccHHHHHHHHhcccCCC
Confidence 99999986 8999999999876543
No 10
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.5e-105 Score=937.65 Aligned_cols=519 Identities=38% Similarity=0.584 Sum_probs=496.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHH
Q 000751 28 WLSELALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSE 107 (1303)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~ 107 (1303)
.+...+..+..+.++..++.+++.+++..+++++..++|.++|+++++++++|||++ ++||++||++.|+..+.+.+..
T Consensus 186 ~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~n-ktGeL~SRLtsD~~~vs~svs~ 264 (716)
T KOG0058|consen 186 ALKRACTILLGLFLIGALANAIRGGLLQYAGERVVARLRTDLFRSLLRQDIAFFDEN-KTGELISRLTSDTQIVSNSVSQ 264 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC-CccHHHhhhhhhHHHHHHHHHH
Confidence 344556666667777888899999999999999999999999999999999999995 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc
Q 000751 108 KVGNYIHNMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFT 187 (1303)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~ 187 (1303)
.+...+.+.+..++++++|+++||+|+++.++.+|+++++..+++++.++.+++.|++.+++++..+|.+++|||||+|+
T Consensus 265 nls~~lR~~~~~~g~~~~M~~~S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa 344 (716)
T KOG0058|consen 265 NLSDGLRNLVQGFGGLGFMFSLSWRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFA 344 (716)
T ss_pred HHHHHHHHHHHHHHhHHHHhhhhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHH
Q 000751 188 NETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQA 267 (1303)
Q Consensus 188 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~ 267 (1303)
.|+.+.++|.+..++..+...|.....+.+.....+...+..+.++++|++++.+|.+|.|.+.+|++|......++..+
T Consensus 345 ~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~l 424 (716)
T KOG0058|consen 345 AEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGL 424 (716)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988888888989999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCC-CCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCC
Q 000751 268 ATNFYSFDQGRIAAYRLYEMISRSSSTTNYDGNTLP-SVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRN 346 (1303)
Q Consensus 268 ~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~-~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~s 346 (1303)
...+..+.++..|.+|++|++|.+|..+.. +...| ...|.|+|+||+|+||.+++.++|+|+||+|+|||+||+||||
T Consensus 425 s~~ys~lmkgvGAs~rvFel~dr~P~i~~~-G~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPS 503 (716)
T KOG0058|consen 425 SSFYSELMKGVGASERVFELMDRKPRIPLT-GTLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPS 503 (716)
T ss_pred HHHHHHHHHhcchHHHHHHHhccCCCCCCC-CccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCC
Confidence 999999999999999999999998875444 43333 4678999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcc
Q 000751 347 GSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHA 425 (1303)
Q Consensus 347 GsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~ 425 (1303)
||||||+++||.+||+|++|+|++||+||+++++.+||++||+|.|||.||++||+|||+||. ++++|++.+|++.|++
T Consensus 504 GsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANa 583 (716)
T KOG0058|consen 504 GSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANA 583 (716)
T ss_pred CCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhCh
Confidence 999999999999999999999999999999999999999999999999999999999999998 8999999999999999
Q ss_pred hHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 000751 426 HTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRL 505 (1303)
Q Consensus 426 ~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~ 505 (1303)
|+||.++|+||||.|||+|..|||||||||||||||++||.||||||+|||||+++|..++++|.+..+++|||+|+|||
T Consensus 584 h~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRL 663 (716)
T KOG0058|consen 584 HEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRL 663 (716)
T ss_pred HHHHHhCccccccccCCccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCEEEEEeCceEeeccChHHHhhcC-hhHHHHHHHHHhc
Q 000751 506 SLIRNADYIAVMDEGRLFEMGTHDELLATG-DLYAELLKCEEAA 548 (1303)
Q Consensus 506 ~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~~~~~~~~~~~~ 548 (1303)
+++++||+|+|+++|+++|.|+|+||+++. |.|.++++.|...
T Consensus 664 STV~~Ad~Ivvi~~G~V~E~G~h~eLl~~~~gly~~Lv~~q~~~ 707 (716)
T KOG0058|consen 664 STVRHADQIVVIDKGRVVEMGTHDELLSKPNGLYAKLVQRQLDS 707 (716)
T ss_pred hHhhhccEEEEEcCCeEEecccHHHHhhCcccHHHHHHHHhccc
Confidence 999999999999999999999999999987 8999999988654
No 11
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.4e-96 Score=910.30 Aligned_cols=515 Identities=41% Similarity=0.671 Sum_probs=493.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHH
Q 000751 32 LALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGN 111 (1303)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~ 111 (1303)
++++++.+++..+++.+++.+++...++++..++|...|+++++++.+|||...++|.|.+|+.+|...++..+.+.+..
T Consensus 709 ~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~ 788 (1228)
T KOG0055|consen 709 WALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSL 788 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHH
Confidence 66777788888899999999999999999999999999999999999999987677999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHH
Q 000751 112 YIHNMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETL 191 (1303)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 191 (1303)
++.++..++++++++|+++|+|+++++++.|++++..+...+++.....+..+.+.+++....|++++||||++|+.|++
T Consensus 789 vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~ 868 (1228)
T KOG0055|consen 789 VVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEK 868 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 192 AKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNF 271 (1303)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~ 271 (1303)
+.+.|.+..+...+...+.+.+.++..++.+.+.++.+++.+|+|++++.+|.++..+++-+++.+.+....+.+....+
T Consensus 869 ~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~ 948 (1228)
T KOG0055|consen 869 FMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYA 948 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999988888888899999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCC--CCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCc
Q 000751 272 YSFDQGRIAAYRLYEMISRSSSTTNY--DGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSG 349 (1303)
Q Consensus 272 ~~~~~~~~a~~ri~~~l~~~~~~~~~--~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsG 349 (1303)
..+.+++.|+.+++++++.++..+.. .+...++.+|+|+|+||+|+||++++.++|+|+||+|++||++|||||||||
T Consensus 949 Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsG 1028 (1228)
T KOG0055|consen 949 PDISKAKIAAGSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSG 1028 (1228)
T ss_pred cHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCC
Confidence 99999999999999999998754332 2223456788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHH
Q 000751 350 KSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTF 428 (1303)
Q Consensus 350 KSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~ 428 (1303)
|||++.||.|||+|++|.|.|||+|++++++++||++||.|+|||.||++||||||+||. +++++|+.+|++.|++|+|
T Consensus 1029 KSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~F 1108 (1228)
T KOG0055|consen 1029 KSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNF 1108 (1228)
T ss_pred HHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHH
Confidence 999999999999999999999999999999999999999999999999999999999994 7899999999999999999
Q ss_pred HHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccc
Q 000751 429 ISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLI 508 (1303)
Q Consensus 429 i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~ 508 (1303)
|.+||+||||.|||+|.+||||||||||||||++|||+||||||+|||||.++|+.++++|++.+.|||+|+|||||+++
T Consensus 1109 I~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTI 1188 (1228)
T KOG0055|consen 1109 ISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTI 1188 (1228)
T ss_pred HhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCEEEEEeCceEeeccChHHHhhcChhHHHHHHHHH
Q 000751 509 RNADYIAVMDEGRLFEMGTHDELLATGDLYAELLKCEE 546 (1303)
Q Consensus 509 ~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 546 (1303)
++||.|+|+++|+|+|+|+|++|++++|.|.+|++.|.
T Consensus 1189 qnaD~I~Vi~~G~VvE~GtH~~L~~~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1189 QNADVIAVLKNGKVVEQGTHDELLAKRGIYFRLVQLQS 1226 (1228)
T ss_pred hcCCEEEEEECCEEEecccHHHHHhCCCchHHHhhhcc
Confidence 99999999999999999999999999999999998764
No 12
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=4e-91 Score=859.59 Aligned_cols=564 Identities=28% Similarity=0.468 Sum_probs=513.2
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 719 LAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGI 798 (1303)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 798 (1303)
++....+.+..+.-.++.+++..++..+.+++...++|...... ..+.+.....++++++++..++.+++.++...
T Consensus 145 f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~----~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~ 220 (709)
T COG2274 145 FIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDA----SRSTLTVLAIGLLLAALFEALLRLLRTYLIAH 220 (709)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC----chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444444444445555555555556666666777665432 23455566778888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 799 MGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLAL 878 (1303)
Q Consensus 799 ~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l 878 (1303)
.+.++...+-.++|+|++++|++||.+ .++|++++|+ +|.+.|+.+++......+.++.++++.++++++++|.+++
T Consensus 221 ~~~rld~~l~~~~~~hll~Lpl~~f~~--r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~l 297 (709)
T COG2274 221 LGKRLDLELSGRFFRHLLRLPLSYFEK--RSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTL 297 (709)
T ss_pred HHHHHhHHHHHHHHHHHHcCcHHHccC--CChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999964 6899999997 6899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 879 VALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIG 958 (1303)
Q Consensus 879 ~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 958 (1303)
++++.+|++++..++..+++++..++..+..++.++.+.|++.|++|||+.+.|.++..+|++.+.+..+..++......
T Consensus 298 i~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~ 377 (709)
T COG2274 298 IVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLAL 377 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 99999999999999999999988888888999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCC
Q 000751 959 FAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKID 1038 (1303)
Q Consensus 959 ~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 1038 (1303)
....+..++..++..+++|+|+.++.+|.+|+|+++++.++......++....+....+.....+.+|+.++++.+++.+
T Consensus 378 ~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~ 457 (709)
T COG2274 378 ILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQE 457 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999876644
Q ss_pred CCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCe
Q 000751 1039 PDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGR 1118 (1303)
Q Consensus 1039 ~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~ 1118 (1303)
.+.. ....+...|+|+|+||+|+|+.+++ ++|+|+||+|+|||+|||||+||||||||+|+|.|+|+|++|+|++||+
T Consensus 458 ~~~~-~~~~~~~~g~I~~~nvsf~y~~~~~-~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~ 535 (709)
T COG2274 458 GDKT-LIHLPKLQGEIEFENVSFRYGPDDP-PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGV 535 (709)
T ss_pred cccc-cccccccCceEEEEEEEEEeCCCCc-chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCE
Confidence 3321 2234456799999999999986643 7999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1119 DLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1119 di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
|++++++++||++|+|||||++||+|||||||+++.|+.++|++++||+.+++|+||.++|.||||+|||+|.+||||||
T Consensus 536 dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQr 615 (709)
T COG2274 536 DLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQR 615 (709)
T ss_pred eHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSL 1278 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eL 1278 (1303)
|||+|||||+++|+||||||||||||++||+.|.+.|.+... +||+|+||||++++++||||+|||+|+|+|+|||+||
T Consensus 616 QrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~-~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~el 694 (709)
T COG2274 616 QRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ-GRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEEL 694 (709)
T ss_pred HHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc-CCeEEEEEccchHhhhccEEEEccCCceeccCCHHHH
Confidence 999999999999999999999999999999999999999865 5999999999999999999999999999999999999
Q ss_pred hhcCchhHHHHhhh
Q 000751 1279 LAKNGLYVRLMQPH 1292 (1303)
Q Consensus 1279 l~~~g~y~~l~~~~ 1292 (1303)
++.+|.|+++|+.|
T Consensus 695 l~~~g~y~~l~~~q 708 (709)
T COG2274 695 LAQGGLYARLYQQQ 708 (709)
T ss_pred HHhcChHHHHHhcc
Confidence 99999999999876
No 13
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=8.2e-91 Score=856.82 Aligned_cols=528 Identities=32% Similarity=0.474 Sum_probs=494.6
Q ss_pred hHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHH
Q 000751 14 KFVDCLVVAFGVEVWLSELALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQ 93 (1303)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr 93 (1303)
.++|.+++..+. .++..+++.++.+++...++.+++.+...+.+.|+..++-.++++|++++|+.||+++ ++||+++|
T Consensus 179 ~viD~Vl~~~~~-~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~~hll~Lpl~~f~~r-~~Ge~~sR 256 (709)
T COG2274 179 IVIDKVLPDASR-STLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFFRHLLRLPLSYFEKR-SVGEIISR 256 (709)
T ss_pred HHHHhhhccCch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCcHHHccCC-ChhhHHHH
Confidence 455666655433 3444455666667777888899999999999999999999999999999999999985 89999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 94 VLSDVLLIQSALSEKVGNYIHNMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIA 173 (1303)
Q Consensus 94 ~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (1303)
+ +|.+.|+++++..+...+.++.+.++.+++|++++|.|++++++.+|+++++..++.+.+++..++..+..++.++..
T Consensus 257 ~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~l 335 (709)
T COG2274 257 V-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFL 335 (709)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 6 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHH
Q 000751 174 EQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTA 253 (1303)
Q Consensus 174 ~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~ 253 (1303)
.|++.|+++||+.+.|..+..+|++...+..+...+..........+..++..++.++++|+|+++|++|++|+|.++++
T Consensus 336 vE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf 415 (709)
T COG2274 336 VETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAF 415 (709)
T ss_pred HHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHH
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC-CCCCCCCCccEEEEEEEEEcCCCCCCCcccceeE
Q 000751 254 LFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRSSSTTNYD-GNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYL 332 (1303)
Q Consensus 254 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~-~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l 332 (1303)
.++...+..|+.++...+..+++.+.+.+|+.++++.|+|.+... ....++..++|+|+||+|+|+.+ ++++|+|+||
T Consensus 416 ~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~~~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL 494 (709)
T COG2274 416 NMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDKTLIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSL 494 (709)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccccccccCceEEEEEEEEEeCCC-CcchhhceeE
Confidence 999999999999999999999999999999999999987644332 12345677899999999999743 3479999999
Q ss_pred EeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CC
Q 000751 333 TVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DA 411 (1303)
Q Consensus 333 ~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~ 411 (1303)
+|++||++||||+||||||||+|+|+|+|+|++|+|++||.|+.++++.++|++||||+||+.||+|||+|||++++ ++
T Consensus 495 ~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~ 574 (709)
T COG2274 495 EIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEA 574 (709)
T ss_pred EeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998 88
Q ss_pred CHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q 000751 412 TLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDL 491 (1303)
Q Consensus 412 ~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~ 491 (1303)
++|++.+||+.+++|+||.++|.||+|.|||+|.+|||||||||+|||||+++|+||||||||||||++||+.|.+.|.+
T Consensus 575 ~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~ 654 (709)
T COG2274 575 TDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQ 654 (709)
T ss_pred CHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhcChhHHHHHHHH
Q 000751 492 LMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLATGDLYAELLKCE 545 (1303)
Q Consensus 492 ~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 545 (1303)
...|+|+|+||||++++++||+|+|||+|+|+++|+|+||++.+|.|++++..|
T Consensus 655 ~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~~g~y~~l~~~q 708 (709)
T COG2274 655 ILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQGGLYARLYQQQ 708 (709)
T ss_pred HhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHhcChHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999998754
No 14
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=2.2e-84 Score=811.77 Aligned_cols=552 Identities=33% Similarity=0.532 Sum_probs=482.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 729 YAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVR 808 (1303)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr 808 (1303)
.+.++.++..+...+....+++++.+++.... .......+...++++.++..++.++..++..+.+.+...++|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr 88 (567)
T COG1132 15 LLLLAILLLLLSALLSLLLPLLIGRIIDALLA------DLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLR 88 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555566666666677777777776551 122334455555666667777888888888888899999999
Q ss_pred HHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 809 RMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILS 888 (1303)
Q Consensus 809 ~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~ 888 (1303)
.++|+++++.|++||++ +++|++++|+++|++.++..+......+...+..+++.+++++.++|.+++++++..|++.
T Consensus 89 ~~~~~~l~~~~~~~~~~--~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~ 166 (567)
T COG1132 89 RDLFEKLLRLPLSFFDK--AKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLA 166 (567)
T ss_pred HHHHHHHHhCCHHHhCc--CCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999999999999986 6789999999999999999999886666667888888999999999999999999988887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 889 LSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLL 968 (1303)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 (1303)
+.........++..+..++...+.+..+.|.++|+++||+|+.++...+++.+..+...+...+.....+....+...+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (567)
T COG1132 167 LVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLS 246 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766665557778888888889999999999999999999999999999998888888777776777777777888888
Q ss_pred HHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCC
Q 000751 969 FACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPP 1048 (1303)
Q Consensus 969 ~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 1048 (1303)
.+..+.+++++...+..+.+++|.+...+.+......++.........+.....+++|++++++.++.....+.. ..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~---~~ 323 (567)
T COG1132 247 SLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP---LK 323 (567)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC---CC
Confidence 899999999999999999999998877777777777777777777788888999999999999875543222111 22
Q ss_pred CCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHh
Q 000751 1049 NVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWL 1128 (1303)
Q Consensus 1049 ~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~l 1128 (1303)
...|+|+|+||+|+|+++ .++|+|+||+|+|||++||||||||||||++++|+|+|+|++|+|+|||+||++++.++|
T Consensus 324 ~~~~~I~f~~vsf~y~~~--~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~l 401 (567)
T COG1132 324 DTIGSIEFENVSFSYPGK--KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSL 401 (567)
T ss_pred CCCCeEEEEEEEEEcCCC--CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHH
Confidence 345789999999999852 359999999999999999999999999999999999999999999999999999999999
Q ss_pred hcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHh
Q 000751 1129 RNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVL 1208 (1303)
Q Consensus 1129 R~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAll 1208 (1303)
|++|++|||||+||+|||+|||.+|+++++|||+++||+.++++|||.++|+||||.|||+|.+||||||||||||||++
T Consensus 402 r~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall 481 (567)
T COG1132 402 RKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALL 481 (567)
T ss_pred HHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcCchhHHH
Q 000751 1209 KNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRL 1288 (1303)
Q Consensus 1209 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~g~y~~l 1288 (1303)
++|+|||||||||+||++||+.|++++++..+ +||+|+||||++++++||+|+|||+|+|+|.|+|+||++++|.|++|
T Consensus 482 ~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~-~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~~g~y~~l 560 (567)
T COG1132 482 RNPPILILDEATSALDTETEALIQDALKKLLK-GRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAKGGLYARL 560 (567)
T ss_pred cCCCEEEEeccccccCHHhHHHHHHHHHHHhc-CCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHcCCHHHHH
Confidence 99999999999999999999999999998764 58999999999999999999999999999999999999999999999
Q ss_pred Hhhhhh
Q 000751 1289 MQPHYG 1294 (1303)
Q Consensus 1289 ~~~~~~ 1294 (1303)
|+.|..
T Consensus 561 ~~~~~~ 566 (567)
T COG1132 561 YQAQGG 566 (567)
T ss_pred HHHhhc
Confidence 998754
No 15
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3e-84 Score=815.52 Aligned_cols=569 Identities=20% Similarity=0.273 Sum_probs=472.3
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 716 FWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFY 795 (1303)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 795 (1303)
+++++.+.++.++.+++++++.++...+.++.+++++.+++.....+. .......+..+++++.++..++.+++.++
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (588)
T PRK11174 10 TRWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENI---PREALLPPFILLILLFVLRALLAWLRERV 86 (588)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---chhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666777777777777888888888888888888886542110 01123334455556666778888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 796 FGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWR 875 (1303)
Q Consensus 796 ~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~ 875 (1303)
..+.+.++..++|.++|++++++|++||++ +++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.
T Consensus 87 ~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~--~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 164 (588)
T PRK11174 87 GFKAGQHIRQQIRQQVLDKLQQLGPAWIQG--KPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWA 164 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchhhcc--CCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999974 689999999999999999999999999898888888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 876 LALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGM 955 (1303)
Q Consensus 876 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1303)
+++++++++|+.++......+..++..++.++...+....+.|.++|+++||+|++|+.+.++|++..++..+...+...
T Consensus 165 l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 244 (588)
T PRK11174 165 AGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLR 244 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998877766666666667777778888888999999999999999999999999999998888877766655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHH---HHHH------HHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 000751 956 AIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTA---LKEY------MVFSFATFALVEPFGLAPYILKRRKSLIS 1026 (1303)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~---~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1303)
.......+...+..+..++++++++..+. |.+++|.+ +..+ ++......++.........+.++..++.|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~r 323 (588)
T PRK11174 245 MAFLSSAVLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAES 323 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555555555555445455554443 66666643 1111 12222334455555666677888899999
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccc
Q 000751 1027 VFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFY 1106 (1303)
Q Consensus 1027 i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~ 1106 (1303)
+.++++.+++.++.. ....+....+.|+|+||+|.|+++ .++|+|+||+|+|||++||||+||||||||+++|+|+|
T Consensus 324 i~~~l~~~~~~~~~~-~~~~~~~~~~~i~~~~vsf~~~~~--~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~ 400 (588)
T PRK11174 324 LVTFLETPLAHPQQG-EKELASNDPVTIEAEDLEILSPDG--KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL 400 (588)
T ss_pred HHHHHcCCCcccCCC-ccccCCCCCceEEEEeeEEeccCC--CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 999987654221111 111111123579999999988643 36999999999999999999999999999999999999
Q ss_pred cCCccEEEECCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccc
Q 000751 1107 DPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHV 1186 (1303)
Q Consensus 1107 ~~~~G~I~idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~v 1186 (1303)
|++|+|++||+|+++++.+++|++|+||||||+||+|||||||.+|+|+++|+|+++|++.|++++||+++|+||||.|
T Consensus 401 -p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~v 479 (588)
T PRK11174 401 -PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPI 479 (588)
T ss_pred -CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhccccccccc
Confidence 9999999999999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeC
Q 000751 1187 GMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNG 1266 (1303)
Q Consensus 1187 ge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~ 1266 (1303)
||+|.+||||||||||||||++++|+||||||||||||++||+.|+++|++..+ ++|+|+||||++++++||+|+||++
T Consensus 480 ge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~-~~TvIiItHrl~~i~~aD~Iivl~~ 558 (588)
T PRK11174 480 GDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASR-RQTTLMVTHQLEDLAQWDQIWVMQD 558 (588)
T ss_pred ccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhC-CCEEEEEecChHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999999998754 6999999999999999999999999
Q ss_pred CEEEEecChHHHhhcCchhHHHHhhhhhc
Q 000751 1267 GRIVEEGTHDSLLAKNGLYVRLMQPHYGK 1295 (1303)
Q Consensus 1267 G~Ive~Gt~~eLl~~~g~y~~l~~~~~~~ 1295 (1303)
|+|+|.|+|+||++++|.|++++..|..+
T Consensus 559 G~i~e~G~~~eL~~~~~~y~~l~~~q~~~ 587 (588)
T PRK11174 559 GQIVQQGDYAELSQAGGLFATLLAHRQEE 587 (588)
T ss_pred CeEeecCCHHHHHhcchHHHHHHHHhhcC
Confidence 99999999999999999999999987654
No 16
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.5e-85 Score=821.50 Aligned_cols=503 Identities=22% Similarity=0.239 Sum_probs=445.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000751 39 IAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMAT 118 (1303)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~ 118 (1303)
+.++..++.+++.++....+.++..++|.++|+|++++|+.+|+++ ++|++++|+++|++.+++++.+.++.++.+++.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~-~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~ 150 (588)
T PRK11174 72 LFVLRALLAWLRERVGFKAGQHIRQQIRQQVLDKLQQLGPAWIQGK-PAGSWATLVLEQVEDMHDFYARYLPQMALAVLV 150 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccC-CHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556677788888888999999999999999999999999985 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHH
Q 000751 119 FFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYAT 198 (1303)
Q Consensus 119 ~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~ 198 (1303)
+++.++++++++|.+++++++++|+++++..++.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.++|.+
T Consensus 151 ~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~ 230 (588)
T PRK11174 151 PLLILIAVFPINWAAGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRS 230 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHH
Confidence 99999999999999999999999998888888889998999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHH---------HHHHHHHHHHHHHHHHHHH
Q 000751 199 SLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEI---------VTALFAVILSGLGLNQAAT 269 (1303)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l---------~~~~~~~~~~~~~l~~~~~ 269 (1303)
..++..+...+.........++..++..+..+++++++++.+ .|.+++|.+ ++++.+...+..|+..+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~ 309 (588)
T PRK11174 231 ASEDFRQRTMEVLRMAFLSSAVLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGT 309 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHHHHH
Confidence 999888887776666665555555555555545545555544 378888764 1222344456689999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCC-CCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCC
Q 000751 270 NFYSFDQGRIAAYRLYEMISRSSSTTNYDGNTLP-SVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGS 348 (1303)
Q Consensus 270 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~-~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGs 348 (1303)
.+..+++++.+.+|+.++++.+++.........+ ...+.|+|+||+|.|++ ++++|+|+||+|+||+++||||||||
T Consensus 310 ~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGs 387 (588)
T PRK11174 310 FYHAKAQAVGAAESLVTFLETPLAHPQQGEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGA 387 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccCCCccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCC
Confidence 9999999999999999999876432211111111 12346999999988753 45799999999999999999999999
Q ss_pred cHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchH
Q 000751 349 GKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHT 427 (1303)
Q Consensus 349 GKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~ 427 (1303)
|||||+++|+|+| |++|+|.+||+|+++++.+++|++|+||+|+|+||++||+|||++|+ +++++++++|++.|++++
T Consensus 388 GKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~ 466 (588)
T PRK11174 388 GKTSLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSE 466 (588)
T ss_pred CHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHH
Confidence 9999999999999 99999999999999999999999999999999999999999999996 799999999999999999
Q ss_pred HHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcc
Q 000751 428 FISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSL 507 (1303)
Q Consensus 428 ~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~ 507 (1303)
||++||+||||.|||+|.+||||||||||||||++++|+|||||||||+||+++|+.++++|+++.+++|+|+||||+++
T Consensus 467 ~i~~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~ 546 (588)
T PRK11174 467 FLPLLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLED 546 (588)
T ss_pred HHHhcccccccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999899999999999999
Q ss_pred ccccCEEEEEeCceEeeccChHHHhhcChhHHHHHHHHH
Q 000751 508 IRNADYIAVMDEGRLFEMGTHDELLATGDLYAELLKCEE 546 (1303)
Q Consensus 508 ~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 546 (1303)
++.||+|++|++|+|++.|+|+||+++++.|+++++.|.
T Consensus 547 i~~aD~Iivl~~G~i~e~G~~~eL~~~~~~y~~l~~~q~ 585 (588)
T PRK11174 547 LAQWDQIWVMQDGQIVQQGDYAELSQAGGLFATLLAHRQ 585 (588)
T ss_pred HHhCCEEEEEeCCeEeecCCHHHHHhcchHHHHHHHHhh
Confidence 999999999999999999999999999999999998765
No 17
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=4.6e-84 Score=808.89 Aligned_cols=508 Identities=35% Similarity=0.511 Sum_probs=468.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHH
Q 000751 35 YIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIH 114 (1303)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~ 114 (1303)
+++++.++..++.++..++..+.+.++..++|.+++++++++|+.+|+++ ++|++++|+++|++.+++.+.+....+..
T Consensus 57 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~-~~g~l~~~~t~d~~~~~~~~~~~~~~~~~ 135 (567)
T COG1132 57 LLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLLRLPLSFFDKA-KSGDLISRLTNDVEAVSNLVSTVLVLVFT 135 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhCcC-CcchHHHHHHhhHHHHHHHHHHhHHHHHH
Confidence 33344445666777777777888899999999999999999999999995 88999999999999999999988666666
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHH
Q 000751 115 NMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKY 194 (1303)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~ 194 (1303)
.+..+++.+++++..+|.+++++++..|++.++..++.++.++..++.++..++.++.+.|.++|++++|+|+.++.+.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~ 215 (567)
T COG1132 136 SILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELK 215 (567)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHH
Confidence 78889999999999999999999999999999888888877889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 195 SYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSF 274 (1303)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~ 274 (1303)
++.+..+...+...+.....+...++..++..+..++++++|.+++.++.+++|.+++++.+...+..|+..+...+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 295 (567)
T COG1132 216 RFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLL 295 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888887877888777788888888888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHH
Q 000751 275 DQGRIAAYRLYEMISRSSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSII 354 (1303)
Q Consensus 275 ~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~ 354 (1303)
+.+..+.+|++++++.+++..+.... .....++|+|+||+|+|++ ++++|+|+||++++||++|||||||||||||+
T Consensus 296 ~~~~~a~~ri~~~l~~~~~~~~~~~~-~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~ 372 (567)
T COG1132 296 QRASAAAERLFELLDEEPEVEDPPDP-LKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLI 372 (567)
T ss_pred HHHHHHHHHHHHHHcCCccccCCCCC-CCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHH
Confidence 99999999999999986543222211 2234567999999999963 56899999999999999999999999999999
Q ss_pred HHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhcc
Q 000751 355 PLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLE 433 (1303)
Q Consensus 355 ~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~ 433 (1303)
++|+|+|+|++|+|++||+|+++++.+++|++|++|||||+||++||+|||.+|+ ++++|++++|++.+++++||+++|
T Consensus 373 ~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp 452 (567)
T COG1132 373 KLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLP 452 (567)
T ss_pred HHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCc
Confidence 9999999999999999999999999999999999999999999999999999998 699999999999999999999999
Q ss_pred cccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCE
Q 000751 434 KGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADY 513 (1303)
Q Consensus 434 ~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~ 513 (1303)
+||||.|||+|.+||||||||||||||+++||+|||||||||+||++||+.+++++.++.++||+|+||||++++++||+
T Consensus 453 ~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~ 532 (567)
T COG1132 453 DGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADR 532 (567)
T ss_pred ccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCE
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred EEEEeCceEeeccChHHHhhcChhHHHHHHHHH
Q 000751 514 IAVMDEGRLFEMGTHDELLATGDLYAELLKCEE 546 (1303)
Q Consensus 514 i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 546 (1303)
|+|||+|+|+|.|+|+||++++|.|+++++.|.
T Consensus 533 IiVl~~G~i~e~G~h~eLl~~~g~y~~l~~~~~ 565 (567)
T COG1132 533 IIVLDNGRIVERGTHEELLAKGGLYARLYQAQG 565 (567)
T ss_pred EEEEECCEEEEecCHHHHHHcCCHHHHHHHHhh
Confidence 999999999999999999999999999998764
No 18
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.2e-83 Score=817.75 Aligned_cols=565 Identities=30% Similarity=0.475 Sum_probs=493.7
Q ss_pred chHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 714 PSFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQH 793 (1303)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 793 (1303)
+.+++++++.++.+..+...+++.++...+....+++.+.+++....... .........+++++.++..++.+++.
T Consensus 147 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~ 222 (711)
T TIGR00958 147 DLLFRLLGLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKG----PPALASAIFFMCLLSIASSVSAGLRG 222 (711)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777777777777777777777777888888888888887653321 11222334445555666777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 794 FYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLE 873 (1303)
Q Consensus 794 ~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~ 873 (1303)
+++.+.+.++..++|.++|++++++|++||++ +++|++++|+++|++.+++.+...+..++..++.+++.+++++.++
T Consensus 223 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~--~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s 300 (711)
T TIGR00958 223 GSFNYTMARINLRIREDLFRSLLRQDLGFFDE--NKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLS 300 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999975 6789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Q 000751 874 WRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLH 953 (1303)
Q Consensus 874 ~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~ 953 (1303)
|.+++++++.+|+..+......++.++..++.++...+.+..+.|.++|+++||+|+.|+++.++|.+..++..+...+.
T Consensus 301 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 380 (711)
T TIGR00958 301 PRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRK 380 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998988877777777777778888888888999999999999999999999999999999999988877777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhc
Q 000751 954 GMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDR 1033 (1303)
Q Consensus 954 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 1033 (1303)
....+....+...+..+..++++++|++++..|.+++|.++....+......++.........+.+...+.+|++++++.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~ 460 (711)
T TIGR00958 381 ALAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDR 460 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 66666666666667777778888999999999999999988877777777777777788888889999999999999987
Q ss_pred CCCCCCCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEE
Q 000751 1034 VPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQV 1113 (1303)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I 1113 (1303)
+++.++.. ...+.+..|.|+|+||+|+||++++.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|
T Consensus 461 ~~~~~~~~--~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I 538 (711)
T TIGR00958 461 KPNIPLTG--TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQV 538 (711)
T ss_pred CCCCCCCC--CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEE
Confidence 65432211 1112234578999999999987655679999999999999999999999999999999999999999999
Q ss_pred EECCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCC
Q 000751 1114 LLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDL 1193 (1303)
Q Consensus 1114 ~idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1193 (1303)
++||+|+++++.+++|++|+||||||++|+|||||||.++.++.+|++++++++.++++++|+++|+|+||.+||+|.+|
T Consensus 539 ~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~L 618 (711)
T TIGR00958 539 LLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQL 618 (711)
T ss_pred EECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcC
Confidence 99999999999999999999999999999999999999998888999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEec
Q 000751 1194 TPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1194 SgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~G 1273 (1303)
|||||||||||||++++|+|||||||||+||+++|+.+++ .. .. +++|+|+||||+++++.||+|+||++|+|+|+|
T Consensus 619 SGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~-~~-~~~TvIiItHrl~~i~~aD~IivL~~G~ive~G 695 (711)
T TIGR00958 619 SGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR-SR-ASRTVLLIAHRLSTVERADQILVLKKGSVVEMG 695 (711)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh-cc-CCCeEEEEeccHHHHHhCCEEEEEECCEEEEee
Confidence 9999999999999999999999999999999999999999 33 22 369999999999999999999999999999999
Q ss_pred ChHHHhhcCchhHHHH
Q 000751 1274 THDSLLAKNGLYVRLM 1289 (1303)
Q Consensus 1274 t~~eLl~~~g~y~~l~ 1289 (1303)
+|+||++++|.|++|+
T Consensus 696 t~~eL~~~~~~y~~lv 711 (711)
T TIGR00958 696 THKQLMEDQGCYKHLV 711 (711)
T ss_pred CHHHHHhCCCchHhcC
Confidence 9999999999999874
No 19
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=3.9e-82 Score=808.01 Aligned_cols=553 Identities=25% Similarity=0.326 Sum_probs=483.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 726 EWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTE 805 (1303)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 805 (1303)
.++.+...++.+++...+....++++..+++...... .......++++++++.++..++.+++.++..+.+.++..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (686)
T TIGR03797 134 ARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDA----DRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDA 209 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC----ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444455555556666666777777777665322 122334455666666777888889999999999999999
Q ss_pred HHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 806 RVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLP 885 (1303)
Q Consensus 806 ~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p 885 (1303)
++|.++|++++++|+.||+. .++|++++|+. |++.+++.+...+...+.+...+++.++++++++|.+++++++++|
T Consensus 210 ~l~~~~~~~ll~~~~~~~~~--~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~ 286 (686)
T TIGR03797 210 SLQAAVWDRLLRLPVSFFRQ--YSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALAL 286 (686)
T ss_pred HHHHHHHHHHHcCCHHHHCC--CChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999974 68899999997 7999999998888787888888888888999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 886 ILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQ 965 (1303)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 965 (1303)
++++...+..+..++..++..+...+....+.|.++|+++||+++.|+++.++|++...+..+...+..........+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (686)
T TIGR03797 287 VAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNA 366 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777777777777777788888888899999999999999999999999999999999988888888777777777777
Q ss_pred HHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCC
Q 000751 966 FLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAV 1045 (1303)
Q Consensus 966 ~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 1045 (1303)
++..++.++++++|++++..|.+++|.+++..++......++.........+.....+++|+.++++.+++.+.. ..
T Consensus 367 ~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~---~~ 443 (686)
T TIGR03797 367 VLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA---KT 443 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC---cC
Confidence 888888899999999999999999999988888888888888888888888899999999999998765432211 11
Q ss_pred CCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCH
Q 000751 1046 KPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNL 1125 (1303)
Q Consensus 1046 ~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~ 1125 (1303)
.+....|.|+|+||+|+|++.. +++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.
T Consensus 444 ~~~~~~~~I~~~nvsf~Y~~~~-~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~ 522 (686)
T TIGR03797 444 DPGKLSGAIEVDRVTFRYRPDG-PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDV 522 (686)
T ss_pred CCCCCCceEEEEEEEEEcCCCC-ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCH
Confidence 1222357899999999997442 469999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIAR 1205 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLAR 1205 (1303)
+++|++|+||||||++|+|||||||.+++| ++++++++|++.++++++|+++|+|+||.+||+|.+|||||||||+|||
T Consensus 523 ~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialAR 601 (686)
T TIGR03797 523 QAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIAR 601 (686)
T ss_pred HHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999988 8999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcCchh
Q 000751 1206 VVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLY 1285 (1303)
Q Consensus 1206 Allr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~g~y 1285 (1303)
|++++|+|||||||||+||+++|+.+++.|++. ++|+|+||||+++++.||+|+||++|+|+|.|+|+||++++|.|
T Consensus 602 All~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~~~~y 678 (686)
T TIGR03797 602 ALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAREGLF 678 (686)
T ss_pred HHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhCCcHH
Confidence 999999999999999999999999999999875 48999999999999999999999999999999999999999999
Q ss_pred HHHHhhhh
Q 000751 1286 VRLMQPHY 1293 (1303)
Q Consensus 1286 ~~l~~~~~ 1293 (1303)
++|+..|+
T Consensus 679 ~~l~~~q~ 686 (686)
T TIGR03797 679 AQLARRQL 686 (686)
T ss_pred HHHHHhcC
Confidence 99998663
No 20
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=4.8e-83 Score=854.71 Aligned_cols=511 Identities=28% Similarity=0.466 Sum_probs=448.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhc-cCCchhHHHHHHhhHHHHHHHHHHHHH
Q 000751 32 LALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDT-YGNNGDIVSQVLSDVLLIQSALSEKVG 110 (1303)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~-~~~~G~l~sr~~~Dv~~i~~~~~~~~~ 110 (1303)
+++++++++++.+++.+++.++...+++++..++|.++|++++++|+.||++ ..++|++++|+++|++.+++++...+.
T Consensus 868 ~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~ 947 (1466)
T PTZ00265 868 YSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIV 947 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556666777888899999999999999999999999999999999985 237899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----------------HHHHHHHHHHH
Q 000751 111 NYIHNMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLA-EN-----------------IQDAYAEAASI 172 (1303)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~~~~~ 172 (1303)
.++..+++++++++++++++|.++++++++. +++...+.++.+... ++ .++..++.+..
T Consensus 948 ~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1024 (1466)
T PTZ00265 948 IFTHFIVLFLVSMVMSFYFCPIVAAVLTGTY---FIFMRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFL 1024 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHH
Confidence 9999999999999999999999988765433 333333333332211 11 12335677889
Q ss_pred HHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHH
Q 000751 173 AEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVT 252 (1303)
Q Consensus 173 ~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~ 252 (1303)
++|.++|+++||+|+.|+.+.++|.+..+...+...+.....++..++..++..+..++++|+|++++.+|.+++|++++
T Consensus 1025 ~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~ 1104 (1466)
T PTZ00265 1025 IQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMK 1104 (1466)
T ss_pred HHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 99999999999999999999999999999888888888888888888888888888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC--CCCCC---CCCCCccEEEEEEEEEcCCCCCCCcc
Q 000751 253 ALFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRSSSTTN--YDGNT---LPSVHGNIEFRNVYFSYLSRPEIPIL 327 (1303)
Q Consensus 253 ~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~--~~~~~---~~~~~~~i~~~~v~f~y~~~~~~~~l 327 (1303)
++.+++....++..+...+..+++++++++|++++++.+++.+. ..+.. .+...+.|+|+||+|+||++++.++|
T Consensus 1105 ~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL 1184 (1466)
T PTZ00265 1105 SLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIY 1184 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccc
Confidence 88776666667888888999999999999999999987643211 11111 11234679999999999865566899
Q ss_pred cceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC--------------------------------------------
Q 000751 328 SGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-------------------------------------------- 363 (1303)
Q Consensus 328 ~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-------------------------------------------- 363 (1303)
+|+||+|++|+++|||||||||||||++||+|+|+|
T Consensus 1185 ~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1264 (1466)
T PTZ00265 1185 KDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEG 1264 (1466)
T ss_pred cCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999
Q ss_pred ----------CCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhc
Q 000751 364 ----------TLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSL 432 (1303)
Q Consensus 364 ----------~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l 432 (1303)
++|+|++||+|+++++.+++|++||||+|+|+||++||+|||+||+ +++++++++|++.+++++||.+|
T Consensus 1265 ~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~L 1344 (1466)
T PTZ00265 1265 GSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESL 1344 (1466)
T ss_pred ccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhC
Confidence 6999999999999999999999999999999999999999999996 79999999999999999999999
Q ss_pred ccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccc
Q 000751 433 EKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRN 510 (1303)
Q Consensus 433 ~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~ 510 (1303)
|+||||.|||+|.+|||||||||||||||+++|+||||||||||||+++|+.|+++|.+.. +++|+|+||||+++++.
T Consensus 1345 P~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~ 1424 (1466)
T PTZ00265 1345 PNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKR 1424 (1466)
T ss_pred ccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999884 69999999999999999
Q ss_pred cCEEEEEeC----ceEe-eccChHHHhh-cChhHHHHHHHH
Q 000751 511 ADYIAVMDE----GRLF-EMGTHDELLA-TGDLYAELLKCE 545 (1303)
Q Consensus 511 ~d~i~~l~~----G~i~-~~g~~~~l~~-~~~~~~~~~~~~ 545 (1303)
||+|+||++ |+++ |+|+|+||++ ++|.|+++++.+
T Consensus 1425 aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1425 SDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred CCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhhc
Confidence 999999999 9955 8999999998 589999998754
No 21
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.3e-82 Score=810.58 Aligned_cols=501 Identities=33% Similarity=0.470 Sum_probs=457.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000751 38 YIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMA 117 (1303)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~ 117 (1303)
++.++..++.+++.++....+.++..++|.++|++++++|+.+|++. ++|++++|+++|++.+++.+.+.+..++.+++
T Consensus 209 ~~~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~-~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~ 287 (711)
T TIGR00958 209 LLSIASSVSAGLRGGSFNYTMARINLRIREDLFRSLLRQDLGFFDEN-KTGELTSRLSSDTQTMSRSLSLNVNVLLRNLV 287 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444556677777888888999999999999999999999999985 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHH
Q 000751 118 TFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYA 197 (1303)
Q Consensus 118 ~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~ 197 (1303)
.+++.++++++++|.+++++++..|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.++|.
T Consensus 288 ~~i~~~~~l~~~s~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~ 367 (711)
T TIGR00958 288 MLLGLLGFMLWLSPRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFK 367 (711)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHH
Confidence 99999999999999999999999999998989999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 198 TSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQG 277 (1303)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 277 (1303)
+..++..+...+.....+....+..++..+..++++++|++++.+|.+++|.+++++.+...+..|+..+...+..++++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~ 447 (711)
T TIGR00958 368 EALEETLQLNKRKALAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQA 447 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888777766666655555556666667778889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHH
Q 000751 278 RIAAYRLYEMISRSSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLM 357 (1303)
Q Consensus 278 ~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll 357 (1303)
+.+.+|+.++++.+++..+.....+.+..+.|+|+||+|+||+++++++|+|+||+|+|||++|||||||||||||+++|
T Consensus 448 ~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL 527 (711)
T TIGR00958 448 VGASEKVFEYLDRKPNIPLTGTLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALL 527 (711)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 99999999999876543221111112234679999999999865556899999999999999999999999999999999
Q ss_pred hccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhccccc
Q 000751 358 ERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGY 436 (1303)
Q Consensus 358 ~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~ 436 (1303)
+|+|+|++|+|.+||+|+++++.+++|++|+||+|||++|++||+|||.+|. ++++++++++++.++++++++++|+|+
T Consensus 528 ~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~Gl 607 (711)
T TIGR00958 528 QNLYQPTGGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGY 607 (711)
T ss_pred HhccCCCCCEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCcc
Confidence 9999999999999999999999999999999999999999999999999997 789999999999999999999999999
Q ss_pred CccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEE
Q 000751 437 ETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAV 516 (1303)
Q Consensus 437 ~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~ 516 (1303)
||.+||+|.+||||||||||||||++++|+|||||||||+||+++|+.+++ ....+++|+|+||||+++++.||+|++
T Consensus 608 dT~ige~G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~Iiv 685 (711)
T TIGR00958 608 DTEVGEKGSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILV 685 (711)
T ss_pred CCcccCCCCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEE
Confidence 999999999999999999999999999999999999999999999999998 334578999999999999999999999
Q ss_pred EeCceEeeccChHHHhhcChhHHHH
Q 000751 517 MDEGRLFEMGTHDELLATGDLYAEL 541 (1303)
Q Consensus 517 l~~G~i~~~g~~~~l~~~~~~~~~~ 541 (1303)
|++|+|++.|+|+||+++++.|+++
T Consensus 686 L~~G~ive~Gt~~eL~~~~~~y~~l 710 (711)
T TIGR00958 686 LKKGSVVEMGTHKQLMEDQGCYKHL 710 (711)
T ss_pred EECCEEEEeeCHHHHHhCCCchHhc
Confidence 9999999999999999999999875
No 22
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.5e-82 Score=730.95 Aligned_cols=512 Identities=26% Similarity=0.306 Sum_probs=464.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHH
Q 000751 32 LALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGN 111 (1303)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~ 111 (1303)
+...++++.+...++.+.+.......+.++...+|+.+++++.++++.+-.+ .++|+..+.+.+.+|.++.++...+|.
T Consensus 42 ~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~-~~~g~~atl~~egve~l~~Y~~ryLPq 120 (559)
T COG4988 42 LLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQ-KPAGSAATLALEGIEQLEPYYARYLPQ 120 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcC-CCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444455666777777777778899999999999999999999999988 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHH
Q 000751 112 YIHNMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETL 191 (1303)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 191 (1303)
+....+.+++.++.+|+++|.-+++++++.|++.+++.++++..++..+++...+..+++.+.|.++|+.|+|.|+..+.
T Consensus 121 ~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~ 200 (559)
T COG4988 121 MFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEA 200 (559)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 192 AKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTH-NKAHGGEIVTALFAVILSGLGLNQAATN 270 (1303)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~-g~~~~g~l~~~~~~~~~~~~~l~~~~~~ 270 (1303)
..++..+..++.++..++.-++.-.......++++++.+++..+.+..... |+++....+.++...--++.|++.+...
T Consensus 201 ~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~ 280 (559)
T COG4988 201 TEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSF 280 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999998888777776667777888888887776655555566 8999888888888888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCCCC-CC-CCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCC
Q 000751 271 FYSFDQGRIAAYRLYEMISRSSSTTNYDGN-TL-PSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGS 348 (1303)
Q Consensus 271 ~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~-~~-~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGs 348 (1303)
++.-..+.++.+.++.+++.|.+..+.... .. ......++++|++|+||+. +++++|+||++++|+++||||+|||
T Consensus 281 fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ei~~~~l~~~y~~g--~~~l~~l~~t~~~g~~talvG~SGa 358 (559)
T COG4988 281 FHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIEISLENLSFRYPDG--KPALSDLNLTIKAGQLTALVGASGA 358 (559)
T ss_pred HHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCceeeecceEEecCCC--CcccCCceeEecCCcEEEEECCCCC
Confidence 999999999999999999887543222211 11 1122345566999999742 3899999999999999999999999
Q ss_pred cHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchH
Q 000751 349 GKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHT 427 (1303)
Q Consensus 349 GKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~ 427 (1303)
|||||+++|+|+++|++|+|.+||+++++++.+.||++++||+|+|+||++||||||++++ +++++++.++++.+++.+
T Consensus 359 GKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~ 438 (559)
T COG4988 359 GKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLE 438 (559)
T ss_pred CHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998 799999999999999999
Q ss_pred HHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcc
Q 000751 428 FISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSL 507 (1303)
Q Consensus 428 ~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~ 507 (1303)
|+.. |+|+||.+||+|.+|||||+||+|||||++++++++|||||||+||.+||+.|.+.|.++.+++|+|+||||++.
T Consensus 439 ~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~ 517 (559)
T COG4988 439 FVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLED 517 (559)
T ss_pred hhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHH
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCEEEEEeCceEeeccChHHHhhcChhHHHHHHHHHh
Q 000751 508 IRNADYIAVMDEGRLFEMGTHDELLATGDLYAELLKCEEA 547 (1303)
Q Consensus 508 ~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 547 (1303)
+..||+|+|||+|++++.|+|++|.++++.|++++..|..
T Consensus 518 ~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~~q~~ 557 (559)
T COG4988 518 AADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLKQQEG 557 (559)
T ss_pred HhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHHHHhc
Confidence 9999999999999999999999999999999999987753
No 23
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=4.7e-82 Score=807.24 Aligned_cols=525 Identities=26% Similarity=0.321 Sum_probs=471.2
Q ss_pred hHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHH
Q 000751 14 KFVDCLVVAFGVEVWLSELALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQ 93 (1303)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr 93 (1303)
.++|.++.... ...+..+++.++++.++.+++.+++.+.....+.++..++|.++|+|++++|+.+|+++ ++|++++|
T Consensus 161 ~iid~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~~~~~-~~g~~~~r 238 (686)
T TIGR03797 161 ILIGTAIPDAD-RSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVWDRLLRLPVSFFRQY-STGDLASR 238 (686)
T ss_pred HHHHHhhhcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHCCC-ChhHHHHH
Confidence 44455543322 12222333334444555667788888888889999999999999999999999999985 88999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 94 VLSDVLLIQSALSEKVGNYIHNMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIA 173 (1303)
Q Consensus 94 ~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (1303)
++ |++.+++++...+...+.++..+++.++++++++|.+++++++.+|+++++..++.++.++..++.++..++..+.+
T Consensus 239 ~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (686)
T TIGR03797 239 AM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLT 317 (686)
T ss_pred Hh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 96 79999999999888888888888889999999999999999999999888888899999999999999999999999
Q ss_pred HHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHH
Q 000751 174 EQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTA 253 (1303)
Q Consensus 174 ~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~ 253 (1303)
.|.++|+++||+++.|+.+.++|.+...+..+...+......+...+..++..+..++++|+|++++.+|.+|+|.++++
T Consensus 318 ~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~ 397 (686)
T TIGR03797 318 VQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAF 397 (686)
T ss_pred HHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 99999999999999999999999999999988888888888777777777777788888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEE
Q 000751 254 LFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRSSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLT 333 (1303)
Q Consensus 254 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~ 333 (1303)
..+...+..|+.++...+..+++++.+.+|+.++++.+++..... .......+.|+|+||+|+|++. ++++|+|+||+
T Consensus 398 ~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~-~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~ 475 (686)
T TIGR03797 398 NTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAK-TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQ 475 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCc-CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEE
Confidence 999999999999999999999999999999999998765432111 1112234679999999999643 46799999999
Q ss_pred eeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCCCCCH
Q 000751 334 VPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATL 413 (1303)
Q Consensus 334 i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~ 413 (1303)
|++||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++||||+|||++|+|||+|||.+++++++
T Consensus 476 i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~ 555 (686)
T TIGR03797 476 IEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTL 555 (686)
T ss_pred ECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988999
Q ss_pred HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc
Q 000751 414 DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM 493 (1303)
Q Consensus 414 ~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~ 493 (1303)
++++++++.|+++++++++|+|+||.+||+|.+|||||||||+||||++++|+|||||||||+||+++|+.+.+.++++
T Consensus 556 e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~- 634 (686)
T TIGR03797 556 DEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL- 634 (686)
T ss_pred HHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred CCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhcChhHHHHHHHH
Q 000751 494 LGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLATGDLYAELLKCE 545 (1303)
Q Consensus 494 ~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 545 (1303)
++|+|+||||+++++.||+|++|++|+|++.|+|+||+++++.|+++++.|
T Consensus 635 -~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~~~~y~~l~~~q 685 (686)
T TIGR03797 635 -KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAREGLFAQLARRQ 685 (686)
T ss_pred -CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhCCcHHHHHHHhc
Confidence 689999999999999999999999999999999999999999999998754
No 24
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.5e-81 Score=725.48 Aligned_cols=549 Identities=25% Similarity=0.343 Sum_probs=478.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 736 GAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAM 815 (1303)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~i 815 (1303)
...+.++......+++...++..+... .......++..++++.++..++.+.+.....+.+.++...+|+++++++
T Consensus 8 l~~l~~i~~i~qa~llA~~l~~l~~~~----~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l 83 (559)
T COG4988 8 LAVLSGIAIIAQAALLADILTKLIEGQ----LFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKL 83 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555556666777666665432 1334455667777778888899999999999999999999999999999
Q ss_pred HhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 816 LRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQK 895 (1303)
Q Consensus 816 l~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~ 895 (1303)
.+.++.|-+. .++|+..+.+...++.++.++...++....+.+..++.++.+++++|..+++++.++|++++++++..
T Consensus 84 ~~~gp~~~~~--~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg 161 (559)
T COG4988 84 AKLGPAFIAQ--KPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVG 161 (559)
T ss_pred HhCChhhhcC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998764 68899999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 896 LWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALL 975 (1303)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1303)
...+..+++........+.++.|.++|+.|+|.|+..+...++..+...+..+..+......-....+..++.++..+++
T Consensus 162 ~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlv 241 (559)
T COG4988 162 LAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALV 241 (559)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888999999999999999999999999999998888888888877766665556667788888888888
Q ss_pred HHHHhHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccE
Q 000751 976 LWYTGKSVRD-GYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSI 1054 (1303)
Q Consensus 976 ~~~~~~~v~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I 1054 (1303)
.++.+..... |.+++...+.+++..--...++-..-+.......+..+.+.++.+.+.++...+.............+|
T Consensus 242 Av~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ei 321 (559)
T COG4988 242 AVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIEI 321 (559)
T ss_pred HHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCcee
Confidence 8888887777 899988777666555555555555555555666677888888888876544322221111111223456
Q ss_pred EEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceEE
Q 000751 1055 ELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGL 1134 (1303)
Q Consensus 1055 ~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~ 1134 (1303)
+++|++|+||+.+ ++++|+||+++||+++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+.||++++|
T Consensus 322 ~~~~l~~~y~~g~--~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~ 399 (559)
T COG4988 322 SLENLSFRYPDGK--PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISW 399 (559)
T ss_pred eecceEEecCCCC--cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeee
Confidence 6779999998764 69999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEE
Q 000751 1135 VQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPIL 1214 (1303)
Q Consensus 1135 VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~IL 1214 (1303)
|||+|+||+|||||||.+++++.+|++++++++.+++.+|+.. |+|+||.+||+|.+|||||+||++||||++++++++
T Consensus 400 v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~ 478 (559)
T COG4988 400 VSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLL 478 (559)
T ss_pred eCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEE
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcCchhHHHHhhhhh
Q 000751 1215 LLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQPHYG 1294 (1303)
Q Consensus 1215 lLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~g~y~~l~~~~~~ 1294 (1303)
|||||||+||.+||+.|++.|.+.+++ +|||+||||+..+++||+|+|||+|+++|+|+|++|.+++|.|++|+.+|.+
T Consensus 479 llDEpTA~LD~etE~~i~~~l~~l~~~-ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~~q~~ 557 (559)
T COG4988 479 LLDEPTAHLDAETEQIILQALQELAKQ-KTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLKQQEG 557 (559)
T ss_pred EecCCccCCCHhHHHHHHHHHHHHHhC-CeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHHHHhc
Confidence 999999999999999999999998774 9999999999999999999999999999999999999999999999998876
No 25
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.5e-81 Score=805.39 Aligned_cols=563 Identities=23% Similarity=0.362 Sum_probs=489.6
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 716 FWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFY 795 (1303)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 795 (1303)
+++++...++.+..+...++.+++..++....++++..+++....... ......++..++++.++..++.+++.++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 219 (708)
T TIGR01193 144 LLKFIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM----MGTLGIISIGLIIAYIIQQILSYIQIFL 219 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC----hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444455555555555666666666667777888888887654321 1223334445555666677888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 796 FGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWR 875 (1303)
Q Consensus 796 ~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~ 875 (1303)
..+.+.++..++|.++|++++++|+.||++ .++|++++|++ |.+.+.+.+.......+.+++.+++.++++++++|+
T Consensus 220 ~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~--~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 296 (708)
T TIGR01193 220 LNVLGQRLSIDIILSYIKHLFELPMSFFST--RRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNML 296 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999975 68999999998 899999988888877788888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 876 LALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGM 955 (1303)
Q Consensus 876 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1303)
+++++++.+|++++...+..+..++..++..+...+....+.|+++|+++||+++.|+.+.++|.+...+..+..++...
T Consensus 297 l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 376 (708)
T TIGR01193 297 LFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQK 376 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888887777777778888888888999999999999999999999999999999999888888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCC
Q 000751 956 AIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVP 1035 (1303)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 1035 (1303)
..+....+..++..++.++++++|++++..|.+++|.+++...+......++.........+..+..+.+|+.++++.++
T Consensus 377 ~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 456 (708)
T TIGR01193 377 ADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDS 456 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 77666677777777888889999999999999999999988888888888888888888889999999999999987654
Q ss_pred CCCCCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEE
Q 000751 1036 KIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLL 1115 (1303)
Q Consensus 1036 ~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~i 1115 (1303)
+.+... .....+...|.|+|+||+|+|+++ .++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++
T Consensus 457 e~~~~~-~~~~~~~~~~~I~~~~vsf~y~~~--~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~i 533 (708)
T TIGR01193 457 EFINKK-KRTELNNLNGDIVINDVSYSYGYG--SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILL 533 (708)
T ss_pred cccccc-cccCCCCCCCcEEEEEEEEEcCCC--CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEE
Confidence 332111 111122345789999999999743 36999999999999999999999999999999999999999999999
Q ss_pred CCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcC-CCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCC
Q 000751 1116 DGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYA-RHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLT 1194 (1303)
Q Consensus 1116 dG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g-~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1194 (1303)
||+|+++++.+++|++|+||||||+||+|||||||.++ .+++++++++++++.++++++|.++|+||||.+||+|.+||
T Consensus 534 dg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LS 613 (708)
T TIGR01193 534 NGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSIS 613 (708)
T ss_pred CCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCC
Confidence 99999999999999999999999999999999999998 57789999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecC
Q 000751 1195 PGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1195 gGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt 1274 (1303)
|||||||+||||++++|+|||||||||+||+++|+.+++.|++. + ++|+|+||||+++++.||+|+||++|+++|.|+
T Consensus 614 gGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~-~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~ 691 (708)
T TIGR01193 614 GGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-Q-DKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGS 691 (708)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-c-CCEEEEEecchHHHHcCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999999874 4 699999999999999999999999999999999
Q ss_pred hHHHhhcCchhHHHHh
Q 000751 1275 HDSLLAKNGLYVRLMQ 1290 (1303)
Q Consensus 1275 ~~eLl~~~g~y~~l~~ 1290 (1303)
|+||++++|.|++|++
T Consensus 692 ~~~L~~~~~~y~~l~~ 707 (708)
T TIGR01193 692 HDELLDRNGFYASLIH 707 (708)
T ss_pred HHHHHhcCCcHHHHhh
Confidence 9999999999999985
No 26
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.2e-81 Score=804.96 Aligned_cols=561 Identities=24% Similarity=0.338 Sum_probs=484.3
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 718 RLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFG 797 (1303)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 797 (1303)
.++...++.+..+...++++++..++..+.+++...+++....... ......++++++++.++..++.+++.++..
T Consensus 144 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (710)
T TIGR03796 144 ALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR----QDWLRPLLLGMGLTALLQGVLTWLQLYYLR 219 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444455555555555666777777776543221 112333455555666777888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 798 IMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLA 877 (1303)
Q Consensus 798 ~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~ 877 (1303)
..+.++..++|.++|+++++.|++||+. .++|++++|++.| +.+++++...+...+.+++.+++.++++++++|.++
T Consensus 220 ~~~~~~~~~l~~~~~~~ll~l~~~~~~~--~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 296 (710)
T TIGR03796 220 RLQIKLAVGMSARFLWHILRLPVRFFAQ--RHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLT 296 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHcC--CcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999975 6899999999988 679999988888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 878 LVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAI 957 (1303)
Q Consensus 878 l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 957 (1303)
+++++.+|+.++......+...+..++..+...+....+.|.++|+++||+++.|+.+.++|.+...+..+...+.....
T Consensus 297 li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (710)
T TIGR03796 297 LIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLT 376 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888777777776766777777788888999999999999999999999999999998888888887777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCC
Q 000751 958 GFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKI 1037 (1303)
Q Consensus 958 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 1037 (1303)
.....+..++..+..++++++|++++..|.+++|.+++...+......++.........+.....+++|+.++++.+++.
T Consensus 377 ~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~ 456 (710)
T TIGR03796 377 QILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDP 456 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 77777788888888899999999999999999999998888888888888888888888899999999999998765433
Q ss_pred CCCCC---C-CCCC-CCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccE
Q 000751 1038 DPDDS---S-AVKP-PNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQ 1112 (1303)
Q Consensus 1038 ~~~~~---~-~~~~-~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~ 1112 (1303)
+.... . ...+ +...|.|+|+||+|+|++.. +++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+
T Consensus 457 ~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~-~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~ 535 (710)
T TIGR03796 457 LLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPLE-PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGE 535 (710)
T ss_pred ccccccccccccccCCCCCCeEEEEEEEEecCCCC-CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcE
Confidence 21110 0 0111 22357899999999998542 46999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCC
Q 000751 1113 VLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVD 1192 (1303)
Q Consensus 1113 I~idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~ 1192 (1303)
|++||+|+++++.+++|++|+||||||++|+|||||||.++.++++++++++|++.++++++|.++|+|+||.+||+|.+
T Consensus 536 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~ 615 (710)
T TIGR03796 536 ILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGAN 615 (710)
T ss_pred EEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCC
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEe
Q 000751 1193 LTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEE 1272 (1303)
Q Consensus 1193 LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~ 1272 (1303)
|||||||||+||||++++|+|||||||||+||++||+.+.+.|++ . ++|+|+||||++++..||+|+||++|+|+|.
T Consensus 616 LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~-~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~ 692 (710)
T TIGR03796 616 LSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--R-GCTCIIVAHRLSTIRDCDEIIVLERGKVVQR 692 (710)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--c-CCEEEEEecCHHHHHhCCEEEEEeCCEEEEe
Confidence 999999999999999999999999999999999999999999986 2 6999999999999999999999999999999
Q ss_pred cChHHHhhcCchhHHHH
Q 000751 1273 GTHDSLLAKNGLYVRLM 1289 (1303)
Q Consensus 1273 Gt~~eLl~~~g~y~~l~ 1289 (1303)
|+|+||++++|.|++|+
T Consensus 693 G~~~~Ll~~~~~y~~l~ 709 (710)
T TIGR03796 693 GTHEELWAVGGAYARLI 709 (710)
T ss_pred cCHHHHHHcCCcHHHHh
Confidence 99999999999999987
No 27
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.3e-81 Score=784.51 Aligned_cols=501 Identities=25% Similarity=0.299 Sum_probs=454.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000751 39 IAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMAT 118 (1303)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~ 118 (1303)
++++..++.+++.++.+..+.++..++|.++|+|++++|+.+|+++ ++|++++|+++|++.+++++.+.++.++.+++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~-~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~ 147 (574)
T PRK11160 69 AAIGRTAGRYGERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLARY-RQGDLLNRLVADVDTLDHLYLRLISPLVAALVV 147 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHhhccC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667778888888889999999999999999999999999985 889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHH
Q 000751 119 FFSGLAIAFVNCWQIALITLCTGPFIVAA-GGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYA 197 (1303)
Q Consensus 119 ~~~~~~~~~~~~~~l~l~~l~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~ 197 (1303)
+++.++++++++|.+++++++++|+++++ ..++.++.++..++.++..+++++.+.|.++|+++||+|+.|+.+.++|.
T Consensus 148 ~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~ 227 (574)
T PRK11160 148 ILVLTIGLSFFDLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLE 227 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHH
Confidence 99999999999999999988888876553 46667777888888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 000751 198 TSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVIL-SGLGLNQAATNFYSFDQ 276 (1303)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~-~~~~l~~~~~~~~~~~~ 276 (1303)
+..++..+...+.....+...++..++..+..++++++|++++ +|.+++|.+++++.+... ...|+..+...+..+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~ 306 (574)
T PRK11160 228 QTEQQWLAAQRRQANLTGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQ 306 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888888887777777777777788889999884 899999999988766544 44678888888899999
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHH
Q 000751 277 GRIAAYRLYEMISRSSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPL 356 (1303)
Q Consensus 277 ~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~l 356 (1303)
+..+++|+.++++.+++.............+.|+|+||+|+|++. ++++|+|+||++++||++|||||||||||||+++
T Consensus 307 ~~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~l 385 (574)
T PRK11160 307 VIASARRINEITEQKPEVTFPTTSTAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQL 385 (574)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcccCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHH
Confidence 999999999999876543221111112234579999999999742 3579999999999999999999999999999999
Q ss_pred HhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhcccc
Q 000751 357 MERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKG 435 (1303)
Q Consensus 357 l~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g 435 (1303)
|+|+|+|++|+|.+||+|+++++.+++|++|+||+|+|++|++||+|||++++ ++++++++++++.+++++++++ |+|
T Consensus 386 l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~G 464 (574)
T PRK11160 386 LTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKG 464 (574)
T ss_pred HhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccc
Confidence 99999999999999999999999999999999999999999999999999997 7899999999999999999999 999
Q ss_pred cCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEE
Q 000751 436 YETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIA 515 (1303)
Q Consensus 436 ~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~ 515 (1303)
|||.+||+|.+|||||||||+||||++++|+|||||||||+||+++|+.+.+.+.+..+++|+|+||||+++++.||+|+
T Consensus 465 ldT~vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~ 544 (574)
T PRK11160 465 LNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRIC 544 (574)
T ss_pred cCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred EEeCceEeeccChHHHhhcChhHHHHHH
Q 000751 516 VMDEGRLFEMGTHDELLATGDLYAELLK 543 (1303)
Q Consensus 516 ~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 543 (1303)
+|++|++++.|+|+||+++++.|+++++
T Consensus 545 ~l~~G~i~~~g~~~~l~~~~g~y~~l~~ 572 (574)
T PRK11160 545 VMDNGQIIEQGTHQELLAQQGRYYQLKQ 572 (574)
T ss_pred EEeCCeEEEeCCHHHHHhcCcHHHHHHh
Confidence 9999999999999999999999999986
No 28
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.2e-81 Score=803.77 Aligned_cols=501 Identities=26% Similarity=0.344 Sum_probs=459.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000751 38 YIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMA 117 (1303)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~ 117 (1303)
++.+...++.++..++....+.++..++|.++|+|++++|+.+|+++ ++|++++|++ |++.+++++...+...+.+++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~-~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~ 281 (708)
T TIGR01193 204 IAYIIQQILSYIQIFLLNVLGQRLSIDIILSYIKHLFELPMSFFSTR-RTGEIVSRFT-DASSIIDALASTILSLFLDMW 281 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-chhHHHHHhh-hHHHHHHHHHHHHHHHHHHHH
Confidence 33444556778888888889999999999999999999999999985 8999999997 999999999999888888888
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHH
Q 000751 118 TFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYA 197 (1303)
Q Consensus 118 ~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~ 197 (1303)
.+++.++++++++|.+++++++.+|+++++..++.++.++..++.++..++..+.+.|.++|+++||+||.|+.+.++|.
T Consensus 282 ~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~ 361 (708)
T TIGR01193 282 ILVIVGLFLVRQNMLLFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKID 361 (708)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 198 TSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQG 277 (1303)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 277 (1303)
+...+..+...+..........+..++..+..++++++|++++.+|.+|+|.++++..+...+..|+.++...+..++.+
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~ 441 (708)
T TIGR01193 362 SEFGDYLNKSFKYQKADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAA 441 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888888777777766666666666777888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCCCCCCC-CCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHH
Q 000751 278 RIAAYRLYEMISRSSSTTNYDG-NTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPL 356 (1303)
Q Consensus 278 ~~a~~ri~~~l~~~~~~~~~~~-~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~l 356 (1303)
+.+.+|+.++++.+++...... ...+...+.|+|+||+|+|++ ++++|+|+||+|++||++|||||||||||||+++
T Consensus 442 ~~~~~ri~~~l~~~~e~~~~~~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlkl 519 (708)
T TIGR01193 442 RVANNRLNEVYLVDSEFINKKKRTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKL 519 (708)
T ss_pred HHHHHHHHHHHcCCCcccccccccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHH
Confidence 9999999999987654322111 112234567999999999963 4579999999999999999999999999999999
Q ss_pred HhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcC-C-CCCHHHHHHHHHHhcchHHHHhccc
Q 000751 357 MERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYG-R-DATLDQIEEAAKIAHAHTFISSLEK 434 (1303)
Q Consensus 357 l~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~-~-~~~~~~~~~~~~~~~~~~~i~~l~~ 434 (1303)
|+|+|+|++|+|++||+|+++++.+++|++|+||||+|+||++||+|||.+| + ++++++++++++.+++++++.++|+
T Consensus 520 L~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~ 599 (708)
T TIGR01193 520 LVGFFQARSGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPL 599 (708)
T ss_pred HhccCCCCCcEEEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999999998 3 7899999999999999999999999
Q ss_pred ccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEE
Q 000751 435 GYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYI 514 (1303)
Q Consensus 435 g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i 514 (1303)
||||.+||+|.+|||||||||+||||++++|+|||||||||+||+++|+.+.+.|++. +++|+|+||||+++++.||+|
T Consensus 600 gldt~i~e~G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i 678 (708)
T TIGR01193 600 GYQTELSEEGSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKI 678 (708)
T ss_pred ccCcEecCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEE
Confidence 9999999999999999999999999999999999999999999999999999999875 689999999999999999999
Q ss_pred EEEeCceEeeccChHHHhhcChhHHHHHH
Q 000751 515 AVMDEGRLFEMGTHDELLATGDLYAELLK 543 (1303)
Q Consensus 515 ~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 543 (1303)
++|++|++++.|+|+||+++++.|+++++
T Consensus 679 ~~l~~G~i~~~G~~~~L~~~~~~y~~l~~ 707 (708)
T TIGR01193 679 IVLDHGKIIEQGSHDELLDRNGFYASLIH 707 (708)
T ss_pred EEEECCEEEEECCHHHHHhcCCcHHHHhh
Confidence 99999999999999999999999999875
No 29
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.7e-80 Score=772.72 Aligned_cols=565 Identities=23% Similarity=0.328 Sum_probs=470.7
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 718 RLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFG 797 (1303)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 797 (1303)
+++++.++.++.+.++++..++..++....+++++.+++.................+...+.+++++..++.++..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (574)
T PRK11160 6 PFLKLYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSH 85 (574)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455555555666666666666666677777777754321100000001111223344556677788888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 798 IMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLA 877 (1303)
Q Consensus 798 ~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~ 877 (1303)
+.+.++..++|.++|++++++|+.||++ .++|++++|+++|++.++.++...+..++..++.++++++++++++|.++
T Consensus 86 ~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 163 (574)
T PRK11160 86 DATFRVLTHLRVFTFSKLLPLSPAGLAR--YRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLA 163 (574)
T ss_pred HHHHHHHHHHHHHHHHHhhccChHhhcc--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999975 67899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 878 LVALATLPILSLS-AIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMA 956 (1303)
Q Consensus 878 l~~l~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 956 (1303)
+++++++|++.+. ..+..+..+...++.++...+.+..+.|.++|+++||+|+.++++.++|++..++..+...+....
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
T PRK11160 164 LTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANL 243 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988877766543 344445555666777788888889999999999999999999999999999999998888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHHHHHHhcCC
Q 000751 957 IGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATF-ALVEPFGLAPYILKRRKSLISVFEIIDRVP 1035 (1303)
Q Consensus 957 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 1035 (1303)
.+....+..++..+..++++++|+..+ .|.+++|.+++.+.+...... ++.........+.++..+++|+.++++.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~ 322 (574)
T PRK11160 244 TGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKP 322 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 777777777777777888888888884 788888887765544433222 333344555677788899999999988655
Q ss_pred CCCCCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEE
Q 000751 1036 KIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLL 1115 (1303)
Q Consensus 1036 ~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~i 1115 (1303)
+.+.... ..+....+.|+|+||+|+|++.. .++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++
T Consensus 323 ~~~~~~~--~~~~~~~~~i~~~~v~f~y~~~~-~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i 399 (574)
T PRK11160 323 EVTFPTT--STAAADQVSLTLNNVSFTYPDQP-QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILL 399 (574)
T ss_pred CCCCCcc--cCCCCCCCeEEEEEEEEECCCCC-CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEE
Confidence 4221111 11112347899999999997542 36999999999999999999999999999999999999999999999
Q ss_pred CCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCCh
Q 000751 1116 DGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTP 1195 (1303)
Q Consensus 1116 dG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1195 (1303)
||+|+++++.+++|++|+||||||++|++||+|||.++.++.++++++++++.+++++++++ |+||||.+||+|.+|||
T Consensus 400 ~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSg 478 (574)
T PRK11160 400 NGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSG 478 (574)
T ss_pred CCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCH
Confidence 99999999999999999999999999999999999999988999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecCh
Q 000751 1196 GQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTH 1275 (1303)
Q Consensus 1196 GQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~ 1275 (1303)
|||||||||||++++|+|||||||||+||+++|+.+++.|++..+ ++|+|+||||++++..||+|++|++|+++|.|+|
T Consensus 479 GqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~-~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~ 557 (574)
T PRK11160 479 GEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQ-NKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTH 557 (574)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC-CCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCH
Confidence 999999999999999999999999999999999999999998754 6999999999999999999999999999999999
Q ss_pred HHHhhcCchhHHHHh
Q 000751 1276 DSLLAKNGLYVRLMQ 1290 (1303)
Q Consensus 1276 ~eLl~~~g~y~~l~~ 1290 (1303)
+||++++|.|++||+
T Consensus 558 ~~l~~~~g~y~~l~~ 572 (574)
T PRK11160 558 QELLAQQGRYYQLKQ 572 (574)
T ss_pred HHHHhcCcHHHHHHh
Confidence 999999999999986
No 30
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.5e-81 Score=804.37 Aligned_cols=502 Identities=26% Similarity=0.314 Sum_probs=461.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000751 36 IVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHN 115 (1303)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~ 115 (1303)
++++.++.+++.+++.++....+.++..++|.++|+|++++|+.+|+++ ++|++++|+++| +.+++++...+...+.+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~~-~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~ 277 (710)
T TIGR03796 200 MGLTALLQGVLTWLQLYYLRRLQIKLAVGMSARFLWHILRLPVRFFAQR-HAGDIASRVQLN-DQVAEFLSGQLATTALD 277 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-cccHHHHHhhhH-HHHHHHHHHHHHHHHHH
Confidence 3334455567778888888889999999999999999999999999985 899999999888 78999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHH
Q 000751 116 MATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYS 195 (1303)
Q Consensus 116 ~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~ 195 (1303)
+..+++.++++++++|.+++++++.+|+++++..++.++..+..++.++..++..+.+.|.++|+++||++++|+.+.++
T Consensus 278 ~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~ 357 (710)
T TIGR03796 278 AVMLVFYALLMLLYDPVLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSR 357 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHH
Confidence 99999999999999999999999999999988889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 196 YATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFD 275 (1303)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~ 275 (1303)
|.+...+..+...+......+...+..++..+..++++++|++++.+|.+|+|.++++..+...+..|+..+...+..++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~ 437 (710)
T TIGR03796 358 WAGYQAKLLNAQQELGVLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQ 437 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888888877777777777777777888889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC------CCCC-CCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCC
Q 000751 276 QGRIAAYRLYEMISRSSSTTNYD------GNTL-PSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGS 348 (1303)
Q Consensus 276 ~~~~a~~ri~~~l~~~~~~~~~~------~~~~-~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGs 348 (1303)
+++.+.+|+.++++.+++..... .... +...+.|+++||+|+|++. ++++|+|+||+|++||++||||||||
T Consensus 438 ~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGs 516 (710)
T TIGR03796 438 ELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGS 516 (710)
T ss_pred HHHHHHHHHHHHHcCCCccccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCC
Confidence 99999999999998765432111 0111 2234679999999999742 46799999999999999999999999
Q ss_pred cHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchH
Q 000751 349 GKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHT 427 (1303)
Q Consensus 349 GKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~ 427 (1303)
|||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||+|+|++|++||+|||.+++ ++++++++++++.+++++
T Consensus 517 GKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~ 596 (710)
T TIGR03796 517 GKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHD 596 (710)
T ss_pred CHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999987 799999999999999999
Q ss_pred HHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcc
Q 000751 428 FISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSL 507 (1303)
Q Consensus 428 ~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~ 507 (1303)
++.++|+|+||.+||+|.+|||||||||+||||++++|+|||||||||+||+++|+.+.+.+++ .++|+|+||||+++
T Consensus 597 ~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~ 674 (710)
T TIGR03796 597 VITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLST 674 (710)
T ss_pred HHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999986 58999999999999
Q ss_pred ccccCEEEEEeCceEeeccChHHHhhcChhHHHHH
Q 000751 508 IRNADYIAVMDEGRLFEMGTHDELLATGDLYAELL 542 (1303)
Q Consensus 508 ~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 542 (1303)
++.||+|++|++|+|++.|+|+||+++++.|++++
T Consensus 675 i~~~D~Iivl~~G~i~~~G~~~~Ll~~~~~y~~l~ 709 (710)
T TIGR03796 675 IRDCDEIIVLERGKVVQRGTHEELWAVGGAYARLI 709 (710)
T ss_pred HHhCCEEEEEeCCEEEEecCHHHHHHcCCcHHHHh
Confidence 99999999999999999999999999999999886
No 31
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4e-81 Score=709.18 Aligned_cols=544 Identities=26% Similarity=0.393 Sum_probs=450.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc
Q 000751 742 SFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVG 821 (1303)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ 821 (1303)
.++...+.++...++..-..+..+.........+..|.++.+...++..++.+.+.++.+++.+..-.++|++.++++.+
T Consensus 44 ~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~ 123 (591)
T KOG0057|consen 44 ILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLS 123 (591)
T ss_pred HhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 34444455555555543211111122223334567788888889999999999999999999999999999999999999
Q ss_pred ccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 822 WFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAV-IIGMLLEWRLALVALATLPILSLSAIAQKLWLAG 900 (1303)
Q Consensus 822 ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~-~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~ 900 (1303)
||-. ..+|.+.+.+.+-...+..++...+..++..++.+.... .+..-.++..+++.+..+..+..+.+....+..+
T Consensus 124 ~~~~--~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~ 201 (591)
T KOG0057|consen 124 FFLS--RGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNR 201 (591)
T ss_pred hhcC--CCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHH
Confidence 9965 568899999888888888877777766666655554443 4445567777777777777777766677777788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000751 901 FSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTG 980 (1303)
Q Consensus 901 ~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 980 (1303)
+.+++..++..++..+.|.+.|.++||+||.|++..++|...+.++.+...+...+.++.......+.....+.+.+.+.
T Consensus 202 fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~ 281 (591)
T KOG0057|consen 202 FRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGS 281 (591)
T ss_pred HHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999988888888887777777776677777888888
Q ss_pred HHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccEEEEeeE
Q 000751 981 KSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVD 1060 (1303)
Q Consensus 981 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vs 1060 (1303)
.-+.++.++++.+...+..+.+...++...-.....+.++...+..++...+...++... ..+.....|.|+|+||+
T Consensus 282 ~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~~---~~~i~~~~~~I~F~dV~ 358 (591)
T KOG0057|consen 282 NGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQEA---ALPIELFGGSIEFDDVH 358 (591)
T ss_pred hhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhhc---cCCcccCCCcEEEEeeE
Confidence 888899999998876665555555555444444444455555555555443322211110 11112245789999999
Q ss_pred EECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceEEEccCCc
Q 000751 1061 FCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPI 1140 (1303)
Q Consensus 1061 f~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~VpQdp~ 1140 (1303)
|.|++. +++|+|+||+|++||+|||||+|||||||++++|+||++ ++|+|+|||+||++++++.+|+.|||||||..
T Consensus 359 f~y~~k--~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~ 435 (591)
T KOG0057|consen 359 FSYGPK--RKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSV 435 (591)
T ss_pred EEeCCC--CceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCccc
Confidence 999744 359999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred cCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCC
Q 000751 1141 IFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEAS 1220 (1303)
Q Consensus 1141 LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaT 1220 (1303)
||++||.+||.||++.+++||+.++||.+++||.|.++|+||+|.|||+|..||||||||++||||++++|+|++|||||
T Consensus 436 LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaT 515 (591)
T KOG0057|consen 436 LFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEAT 515 (591)
T ss_pred ccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcCchhHHHHhhhhh
Q 000751 1221 SSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQPHYG 1294 (1303)
Q Consensus 1221 SaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~g~y~~l~~~~~~ 1294 (1303)
|+||.+||+.+.+++.... ++||+|+|+||++++++||+|++|++|+|.|.|+|+||+++.+.|+.+|..|..
T Consensus 516 S~LD~~TE~~i~~~i~~~~-~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s~~~~~~w~~~~~ 588 (591)
T KOG0057|consen 516 SALDSETEREILDMIMDVM-SGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPSELYADLWTTQTS 588 (591)
T ss_pred cccchhhHHHHHHHHHHhc-CCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhhhHHHHHhccccc
Confidence 9999999999999999864 479999999999999999999999999999999999999988899999986654
No 32
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.5e-79 Score=772.49 Aligned_cols=561 Identities=29% Similarity=0.453 Sum_probs=477.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 724 FAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKM 803 (1303)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 803 (1303)
++.++.++...+..++..+.....++++..+++..+.... ......+.++++++.++..++.+++.++..+.+.+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 96 (582)
T PRK11176 21 APFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKAD----RSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKV 96 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444444444444445556666666665443210 111222233344466667788888888889999999
Q ss_pred HHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 804 TERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALAT 883 (1303)
Q Consensus 804 ~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~~ 883 (1303)
...+|.++|+++++.|.++|+. .+.|++++|+++|++.+...+...+..++..++.+++.++++++++|.++++++++
T Consensus 97 ~~~lr~~~~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~ 174 (582)
T PRK11176 97 VMTMRRRLFGHMMGMPVSFFDK--QSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVI 174 (582)
T ss_pred HHHHHHHHHHHHHcCCHHHhCC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999974 67899999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 884 LPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGF 963 (1303)
Q Consensus 884 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 963 (1303)
+|+..+......+.+++..++.++...+....+.|.++|+++||+|+.++.+.++|++..++..+...+..........+
T Consensus 175 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (582)
T PRK11176 175 APIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPI 254 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877777676667777777778888888899999999999999999999999999999999988888877777777777
Q ss_pred HHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 000751 964 SQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSS 1043 (1303)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 1043 (1303)
..++..++..+++++|+..+..|.+++|+++..+.++.....++.........+.+...+++|+.++++.+++.+. ..
T Consensus 255 ~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~-~~- 332 (582)
T PRK11176 255 IQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDE-GK- 332 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCC-CC-
Confidence 7777778888889999999999999999988777777666677777777777788888899999888875432211 11
Q ss_pred CCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCC
Q 000751 1044 AVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLY 1123 (1303)
Q Consensus 1044 ~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~ 1123 (1303)
...+...+.|+|+||+|+|++. +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|++++
T Consensus 333 -~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~ 410 (582)
T PRK11176 333 -RVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDY 410 (582)
T ss_pred -cCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhc
Confidence 1112234679999999999754 24699999999999999999999999999999999999999999999999999999
Q ss_pred CHHHhhcceEEEccCCccCcccHHHHHHcCCCC-CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHH
Q 000751 1124 NLRWLRNHLGLVQQEPIIFSTTIRENIIYARHN-ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIA 1202 (1303)
Q Consensus 1124 ~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~-~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1202 (1303)
+.+++|++|+||||||++|+|||||||.+++++ ++|++++++++.++++++++++|+|+||.+||+|.+|||||||||+
T Consensus 411 ~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~ 490 (582)
T PRK11176 411 TLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIA 490 (582)
T ss_pred CHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHH
Confidence 999999999999999999999999999998764 7999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1203 IARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1203 LARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
||||++++|+|||||||||+||++||+.+.+.|.+... ++|+|+||||+++++.||+|++|++|+|+|.|+|++|++++
T Consensus 491 LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~-~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~ 569 (582)
T PRK11176 491 IARALLRDSPILILDEATSALDTESERAIQAALDELQK-NRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQN 569 (582)
T ss_pred HHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhC-CCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCC
Confidence 99999999999999999999999999999999998754 69999999999999999999999999999999999999999
Q ss_pred chhHHHHhhhhhc
Q 000751 1283 GLYVRLMQPHYGK 1295 (1303)
Q Consensus 1283 g~y~~l~~~~~~~ 1295 (1303)
+.|++|+..|..|
T Consensus 570 ~~y~~l~~~~~~~ 582 (582)
T PRK11176 570 GVYAQLHKMQFGQ 582 (582)
T ss_pred ChHHHHHHHHhcC
Confidence 9999999977543
No 33
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-83 Score=704.81 Aligned_cols=506 Identities=27% Similarity=0.374 Sum_probs=424.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 785 TVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIV 864 (1303)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~ 864 (1303)
+.+++.++.++...+.+-..+++-.++|+|+.++++.|+-. ..+|+++.-+.+..+.+. ++...+..+...+.-+.+
T Consensus 272 sG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~--rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~v 348 (790)
T KOG0056|consen 272 SGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLN--RRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGV 348 (790)
T ss_pred ccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeec--ccccceeehhccCcchhh-HHHHHHhhcccHHHHhhh
Confidence 35666778888888888899999999999999999999864 467888888877777665 444433333334444444
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHH
Q 000751 865 AVI-IGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQL 943 (1303)
Q Consensus 865 ~~~-~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~ 943 (1303)
+++ ..+.++|+.+++++.++.+++...+...-+..++.|++.....+....-.+++-|.+|||-|++|++..++|++..
T Consensus 349 a~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAi 428 (790)
T KOG0056|consen 349 AMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAI 428 (790)
T ss_pred hhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHH
Confidence 433 3345689999999988888877776666677777788888888888889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 000751 944 KKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKS 1023 (1303)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1023 (1303)
.++.+..++......+.......+..+..+..-.+.++.+..+..++|+++....++...-+++...-.....+++....
T Consensus 429 l~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiD 508 (790)
T KOG0056|consen 429 LKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFID 508 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhh
Confidence 99999888877766666666555555555555555667777888899887654444443333333333333456677788
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHh
Q 000751 1024 LISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIE 1103 (1303)
Q Consensus 1024 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~ 1103 (1303)
+++++++++++++..+ .+...+....+|.|+|+||+|.|.++ .|||+||||++.||+.||+|||||+||||++++|+
T Consensus 509 mEnmfdllkee~eVvd-~P~a~pl~~~~G~i~fsnvtF~Y~p~--k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLf 585 (790)
T KOG0056|consen 509 MENMFDLLKEEPEVVD-LPGAPPLKVTQGKIEFSNVTFAYDPG--KPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLF 585 (790)
T ss_pred HHHHHHHhhcCchhhc-CCCCCCccccCCeEEEEEeEEecCCC--CceeecceEEecCCcEEEEECCCCCchhHHHHHHH
Confidence 9999999987665432 22222223467999999999999654 47999999999999999999999999999999999
Q ss_pred ccccCCccEEEECCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcc
Q 000751 1104 RFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYD 1183 (1303)
Q Consensus 1104 rl~~~~~G~I~idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gld 1183 (1303)
||||.++|+|+|||+||+++..++||++||+||||.+|||.||.+||.|++|.+++||+.+|+++|++||-|.++|+||+
T Consensus 586 Rffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~ 665 (790)
T KOG0056|consen 586 RFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYN 665 (790)
T ss_pred HHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEE
Q 000751 1184 THVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVV 1263 (1303)
Q Consensus 1184 t~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iiv 1263 (1303)
|.|||+|-.||||||||+||||+++++|.|++|||||||||..||+.||.++.+++. ++|.|+|||||+|+.+||.|+|
T Consensus 666 t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca-~RTtIVvAHRLSTivnAD~ILv 744 (790)
T KOG0056|consen 666 TRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA-NRTTIVVAHRLSTIVNADLILV 744 (790)
T ss_pred hhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc-CCceEEEeeeehheecccEEEE
Confidence 999999999999999999999999999999999999999999999999999999876 6999999999999999999999
Q ss_pred EeCCEEEEecChHHHhhc-CchhHHHHhhhhhccc
Q 000751 1264 LNGGRIVEEGTHDSLLAK-NGLYVRLMQPHYGKGL 1297 (1303)
Q Consensus 1264 l~~G~Ive~Gt~~eLl~~-~g~y~~l~~~~~~~~~ 1297 (1303)
+++|+|+|.|+|+||+.+ +|.|++||+.|..++.
T Consensus 745 i~~G~IvErG~HeeLl~rdgG~Ya~MWq~qqa~g~ 779 (790)
T KOG0056|consen 745 ISNGRIVERGRHEELLKRDGGAYADMWQAQQAMGK 779 (790)
T ss_pred EeCCeEeecCcHHHHHhccCCcHHHHHHHHHhcCc
Confidence 999999999999999998 8899999987776543
No 34
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-83 Score=708.22 Aligned_cols=500 Identities=27% Similarity=0.375 Sum_probs=429.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 45 AAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLA 124 (1303)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~ 124 (1303)
++.-+++++|..+.+-..+++-..+|+|+.++++.|+-.+ ++|+++.-++...+.+. ++...+.++...+.-..++++
T Consensus 274 ~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~r-rtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~v 351 (790)
T KOG0056|consen 274 FLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLNR-RTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMV 351 (790)
T ss_pred chhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeecc-cccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhh
Confidence 4455667778778888888999999999999999999884 89999988877666554 333333333333333333333
Q ss_pred HH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHH
Q 000751 125 IA-FVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQAT 203 (1303)
Q Consensus 125 ~~-~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~ 203 (1303)
.. ..++|+.+++++++..++..+...+..+..+..+++.....+..+...+++-+.++||-||+|+++.++|.++..++
T Consensus 352 YF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Y 431 (790)
T KOG0056|consen 352 YFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKY 431 (790)
T ss_pred hhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHH
Confidence 33 34799999999888777777666666666677777777777778888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 204 LRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGRIAAYR 283 (1303)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~r 283 (1303)
.+...+...-..+....-..+..++.+..-.+..|+|..+.+++|+.+.+..|++.+..|++-++..+..+|+...-+++
T Consensus 432 qk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEn 511 (790)
T KOG0056|consen 432 QKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMEN 511 (790)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHH
Confidence 88877765544444333334444444444445567778899999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCC-CCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC
Q 000751 284 LYEMISRSSSTTNYDGN-TLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD 362 (1303)
Q Consensus 284 i~~~l~~~~~~~~~~~~-~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~ 362 (1303)
++++++++++..+.++. +.....|.|+|+||+|.|+ +++|+|+||||+++||+++|+|||||+||||++++|.|||+
T Consensus 512 mfdllkee~eVvd~P~a~pl~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffd 589 (790)
T KOG0056|consen 512 MFDLLKEEPEVVDLPGAPPLKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFD 589 (790)
T ss_pred HHHHhhcCchhhcCCCCCCccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhh
Confidence 99999988765443322 2223568899999999996 56899999999999999999999999999999999999999
Q ss_pred CCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhcccccCcccc
Q 000751 363 PTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGYETQVG 441 (1303)
Q Consensus 363 ~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg 441 (1303)
.++|.|.|||+||+++...++|++||+||||..|||+||..||.||+ ++++||+.+|+++|++||-|.++|+||+|.||
T Consensus 590 v~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VG 669 (790)
T KOG0056|consen 590 VNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVG 669 (790)
T ss_pred ccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhh
Confidence 99999999999999999999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeCce
Q 000751 442 RAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGR 521 (1303)
Q Consensus 442 ~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~ 521 (1303)
|+|..||||||||+||||+++|+|.|++|||+|||||..||+.|+.++.++..+||.|+|+||++++-+||.|+|+++|+
T Consensus 670 ERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~ 749 (790)
T KOG0056|consen 670 ERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGR 749 (790)
T ss_pred hcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccChHHHhhc-ChhHHHHHHHHHhc
Q 000751 522 LFEMGTHDELLAT-GDLYAELLKCEEAA 548 (1303)
Q Consensus 522 i~~~g~~~~l~~~-~~~~~~~~~~~~~~ 548 (1303)
|+|.|+|+||+++ +|.|++||+.|...
T Consensus 750 IvErG~HeeLl~rdgG~Ya~MWq~qqa~ 777 (790)
T KOG0056|consen 750 IVERGRHEELLKRDGGAYADMWQAQQAM 777 (790)
T ss_pred EeecCcHHHHHhccCCcHHHHHHHHHhc
Confidence 9999999999998 78999999877654
No 35
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.5e-79 Score=785.25 Aligned_cols=550 Identities=24% Similarity=0.380 Sum_probs=476.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 721 ELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMG 800 (1303)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 800 (1303)
...++.+..+...++.+++..++....++++..+++....... ......+.++++++.++..++.+++.++..+.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (694)
T TIGR03375 140 STLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA----FETLWVLAIGVALAIVFDFVLKTLRSYFLDVAG 215 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc----HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444555555555566667777777776543221 122333444455556667788889999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 801 EKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVA 880 (1303)
Q Consensus 801 ~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~ 880 (1303)
.++..++|.++|+|++++|+.| + ..++|++++|+ +|++.+++.+...+...+.+++.+++.++++++++|.+++++
T Consensus 216 ~~~~~~l~~~~~~~ll~l~~~~-~--~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~ 291 (694)
T TIGR03375 216 KKADLILSAKLFERVLGLRMEA-R--PASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVP 291 (694)
T ss_pred HHHHHHHHHHHHHHHhCCCccc-C--CCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 9999999999999999999997 4 35889999999 799999999998888888888888888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 881 LATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFA 960 (1303)
Q Consensus 881 l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 960 (1303)
++.+|++++..+...+..++..++..+...+....+.|.++|+++||+|+.|+.+.++|++...+..+...+........
T Consensus 292 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (694)
T TIGR03375 292 LVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLA 371 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988887777777777788888888899999999999999999999999999999999999888888888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 000751 961 FGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPD 1040 (1303)
Q Consensus 961 ~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 1040 (1303)
..+...+..++.++++++|++++..|.+++|.++....+......++.........+.....+.+|+.++++.+++.++.
T Consensus 372 ~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~ 451 (694)
T TIGR03375 372 TNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEG 451 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 77888888888888999999999999999999998888888888888888888888899999999999998865432211
Q ss_pred CCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeC
Q 000751 1041 DSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDL 1120 (1303)
Q Consensus 1041 ~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di 1120 (1303)
. .....+...|.|+|+||+|+|++. +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+
T Consensus 452 ~-~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l 529 (694)
T TIGR03375 452 T-RFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDI 529 (694)
T ss_pred C-CCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEh
Confidence 1 111112245789999999999754 24699999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHH
Q 000751 1121 KLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQR 1200 (1303)
Q Consensus 1121 ~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1200 (1303)
++++.+++|++|+||||||++|+|||+|||.+++++++++++++|++.++++++|+++|+|+||.+||+|.+||||||||
T Consensus 530 ~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQR 609 (694)
T TIGR03375 530 RQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQA 609 (694)
T ss_pred hhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999998899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhh
Q 000751 1201 IAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLA 1280 (1303)
Q Consensus 1201 laLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~ 1280 (1303)
|+||||++++|+|||||||||+||+++|+.|++.|++..+ ++|+|+||||+++++.||+|+||++|+|+|.|+|+||++
T Consensus 610 lalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~-~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~ 688 (694)
T TIGR03375 610 VALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLA-GKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLE 688 (694)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhC-CCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHH
Confidence 9999999999999999999999999999999999998765 699999999999999999999999999999999999987
Q ss_pred c
Q 000751 1281 K 1281 (1303)
Q Consensus 1281 ~ 1281 (1303)
+
T Consensus 689 ~ 689 (694)
T TIGR03375 689 A 689 (694)
T ss_pred H
Confidence 5
No 36
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.5e-79 Score=770.83 Aligned_cols=567 Identities=24% Similarity=0.331 Sum_probs=470.1
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 716 FWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFY 795 (1303)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 795 (1303)
+++++.+..+.++.+++..++.++...+....+++++.+++......... ......++++++++.++..++.+++.++
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (592)
T PRK10790 11 LKRLLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLP--LGLVAGLAAAYVGLQLLAAGLHYAQSLL 88 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444445555555666666667777777888888887654322111 1111223344555556677778888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 796 FGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWR 875 (1303)
Q Consensus 796 ~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~ 875 (1303)
....+.+...++|.++|+++++.|.+||+. .+.|++++|+++|++.+++.+...+..++..+..+++.++++++++|.
T Consensus 89 ~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (592)
T PRK10790 89 FNRAAVGVVQQLRTDVMDAALRQPLSAFDT--QPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWR 166 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999975 678999999999999999999999998899998888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 876 LALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGM 955 (1303)
Q Consensus 876 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1303)
+++++++++|+.++.........+...++.++...+....+.|.+.|+++||+|+.++++.+++.+..++..+...+...
T Consensus 167 l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (592)
T PRK10790 167 MALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLR 246 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888776666666666666777777778888899999999999999999999999999888777766665554
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcC
Q 000751 956 AIGFA-FGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRV 1034 (1303)
Q Consensus 956 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 1034 (1303)
..+.. ..+..++..+...+++++++. +..|.++++.++....+......++.........+.+...+++++.++++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~ 325 (592)
T PRK10790 247 LDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGP 325 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 44332 223333333332333333333 5789999999887777777777777888788888889999999999998754
Q ss_pred CCCCCCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEE
Q 000751 1035 PKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVL 1114 (1303)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~ 1114 (1303)
++.. .. . ..+...+.|+|+||+|+|+++ .++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 326 ~~~~-~~-~--~~~~~~~~i~~~~v~f~y~~~--~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~ 399 (592)
T PRK10790 326 RQQY-GN-D--DRPLQSGRIDIDNVSFAYRDD--NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIR 399 (592)
T ss_pred CccC-CC-C--ccCCCCCeEEEEEEEEEeCCC--CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEE
Confidence 3211 11 1 112234689999999999753 3599999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCC
Q 000751 1115 LDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLT 1194 (1303)
Q Consensus 1115 idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1194 (1303)
+||+|+++++.+.+|++|+||||||++|+|||||||.+++ +++|++++++++.+|++++|+++|+|+||.+||+|.+||
T Consensus 400 idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LS 478 (592)
T PRK10790 400 LDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLS 478 (592)
T ss_pred ECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCC
Confidence 9999999999999999999999999999999999999998 589999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecC
Q 000751 1195 PGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1195 gGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt 1274 (1303)
|||||||+||||++++|+|||||||||+||++||+.|++.|++... +||+|+||||+++++.||+|++|++|+++|.|+
T Consensus 479 GGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~ 557 (592)
T PRK10790 479 VGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLSTIVEADTILVLHRGQAVEQGT 557 (592)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchHHHHhCCEEEEEECCEEEEEcC
Confidence 9999999999999999999999999999999999999999998765 599999999999999999999999999999999
Q ss_pred hHHHhhcCchhHHHHhhhhhc
Q 000751 1275 HDSLLAKNGLYVRLMQPHYGK 1295 (1303)
Q Consensus 1275 ~~eLl~~~g~y~~l~~~~~~~ 1295 (1303)
|+||+++++.|+++++.|...
T Consensus 558 ~~~L~~~~~~y~~l~~~~~~~ 578 (592)
T PRK10790 558 HQQLLAAQGRYWQMYQLQLAG 578 (592)
T ss_pred HHHHHhCCCHHHHHHHHHhhh
Confidence 999999999999999977543
No 37
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=6.6e-80 Score=775.82 Aligned_cols=505 Identities=30% Similarity=0.476 Sum_probs=463.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000751 39 IAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMAT 118 (1303)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~ 118 (1303)
++++..++.++..++....+.++..++|.+++++++++|..+|++. ++|++++|+++|++.+++.+.+.+..++.+++.
T Consensus 74 ~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~ 152 (582)
T PRK11176 74 LMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQ-STGTLLSRITYDSEQVASSSSGALITVVREGAS 152 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556667777777788999999999999999999999999985 889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHH
Q 000751 119 FFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYAT 198 (1303)
Q Consensus 119 ~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~ 198 (1303)
+++.++++++++|.+++++++++|+.+++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+
T Consensus 153 ~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~ 232 (582)
T PRK11176 153 IIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDK 232 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHH
Confidence 99999999999999999999998988888888888888888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 199 SLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGR 278 (1303)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 278 (1303)
..++..+...+......+...+..++..+..++++++|++.+.+|.+++|.+++++.+...+..|+..+...+..++.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~ 312 (582)
T PRK11176 233 VSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGM 312 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888777777777777777778888999999999999999999988888888999999999999999999
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHh
Q 000751 279 IAAYRLYEMISRSSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLME 358 (1303)
Q Consensus 279 ~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~ 358 (1303)
.+.+|+.++++.+++.... ....++..+.|+++||+|+|++. ++++|+|+||+|++||++||||+||||||||+++|+
T Consensus 313 ~~~~ri~~~~~~~~~~~~~-~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~ 390 (582)
T PRK11176 313 AACQTLFAILDLEQEKDEG-KRVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLT 390 (582)
T ss_pred HHHHHHHHHhcCCCcCCCC-CcCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHH
Confidence 9999999999765432211 11122234579999999999742 467999999999999999999999999999999999
Q ss_pred ccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC--CCCHHHHHHHHHHhcchHHHHhccccc
Q 000751 359 RFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR--DATLDQIEEAAKIAHAHTFISSLEKGY 436 (1303)
Q Consensus 359 ~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~ 436 (1303)
|+|+|++|+|++||+|+++++.+++|++|+||||||++|++||+|||.+|+ ++++++++++++.++++++++++|+|+
T Consensus 391 gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gl 470 (582)
T PRK11176 391 RFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGL 470 (582)
T ss_pred hccCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhccccc
Confidence 999999999999999999999999999999999999999999999999986 479999999999999999999999999
Q ss_pred CccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEE
Q 000751 437 ETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAV 516 (1303)
Q Consensus 437 ~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~ 516 (1303)
||.+||+|.+|||||||||+||||++++|+|||||||||+||+++++.+.+.|.++.+++|+|+||||++.++.||+|++
T Consensus 471 dt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~ 550 (582)
T PRK11176 471 DTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILV 550 (582)
T ss_pred CceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999998889999999999999999999999
Q ss_pred EeCceEeeccChHHHhhcChhHHHHHHHHH
Q 000751 517 MDEGRLFEMGTHDELLATGDLYAELLKCEE 546 (1303)
Q Consensus 517 l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 546 (1303)
|++|+|++.|+|++|+++++.|+++++.|.
T Consensus 551 l~~g~i~e~g~~~~l~~~~~~y~~l~~~~~ 580 (582)
T PRK11176 551 VEDGEIVERGTHAELLAQNGVYAQLHKMQF 580 (582)
T ss_pred EECCEEEEeCCHHHHHhCCChHHHHHHHHh
Confidence 999999999999999999999999998653
No 38
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3.8e-80 Score=790.69 Aligned_cols=492 Identities=26% Similarity=0.381 Sum_probs=454.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000751 39 IAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMAT 118 (1303)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~ 118 (1303)
+.++..++.+++.++....+.++..++|.++|+|++++|+.+ ++ .++|++++|+ +|++.+++++...+...+.++..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~-~~-~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~ 272 (694)
T TIGR03375 196 AIVFDFVLKTLRSYFLDVAGKKADLILSAKLFERVLGLRMEA-RP-ASVGSFANQL-REFESVRDFFTSATLTALIDLPF 272 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-CC-CChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHH
Confidence 344456777888888888999999999999999999999998 56 4889999998 89999999999988888888888
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHH
Q 000751 119 FFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYAT 198 (1303)
Q Consensus 119 ~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~ 198 (1303)
+++.++++++++|.+++++++.+|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+
T Consensus 273 ~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~ 352 (694)
T TIGR03375 273 ALLFLLVIAIIGGPLVWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQ 352 (694)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 199 SLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGR 278 (1303)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 278 (1303)
...+..+...+..........+..++..++.++++++|++++.+|.+|+|.+++++.+...+..|+..+...+..++.++
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~ 432 (694)
T TIGR03375 353 TVAALARSGLKSRFLSNLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAK 432 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888888888777777777777888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCCCCCC-CCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHH
Q 000751 279 IAAYRLYEMISRSSSTTNYDG-NTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLM 357 (1303)
Q Consensus 279 ~a~~ri~~~l~~~~~~~~~~~-~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll 357 (1303)
.+.+|+.++++.+++...... ...+...+.|+|+||+|+|++ .++++|+|+||+|++||++||||+||||||||+++|
T Consensus 433 ~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~I~~~~vsf~Y~~-~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL 511 (694)
T TIGR03375 433 TALQSLDELMQLPVERPEGTRFLHRPRLQGEIEFRNVSFAYPG-QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLL 511 (694)
T ss_pred HHHHHHHHHHcCCCCCCCCCCCCCCCCccceEEEEEEEEEeCC-CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHH
Confidence 999999999987654322111 111223467999999999974 245799999999999999999999999999999999
Q ss_pred hccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhccccc
Q 000751 358 ERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGY 436 (1303)
Q Consensus 358 ~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~ 436 (1303)
+|+|+|++|+|.+||+|+++++.+++|++|+||+|+|++|++||+|||.+++ ++++++++++++.+++++++.++|+||
T Consensus 512 ~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl 591 (694)
T TIGR03375 512 LGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGL 591 (694)
T ss_pred hcCCCCCCceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccc
Confidence 9999999999999999999999999999999999999999999999999998 699999999999999999999999999
Q ss_pred CccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEE
Q 000751 437 ETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAV 516 (1303)
Q Consensus 437 ~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~ 516 (1303)
||.+||+|.+|||||||||+||||++++|+|||||||||+||+++|+.+.+.+.+..+++|+|+||||+++++.||+|++
T Consensus 592 ~T~i~e~G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iiv 671 (694)
T TIGR03375 592 DMQIGERGRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIV 671 (694)
T ss_pred cceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999889999999999999999999999
Q ss_pred EeCceEeeccChHHHhhc
Q 000751 517 MDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 517 l~~G~i~~~g~~~~l~~~ 534 (1303)
|++|+|++.|+|+||+++
T Consensus 672 l~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 672 MDNGRIVADGPKDQVLEA 689 (694)
T ss_pred EeCCEEEeeCCHHHHHHH
Confidence 999999999999999764
No 39
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.2e-78 Score=776.19 Aligned_cols=565 Identities=26% Similarity=0.379 Sum_probs=487.4
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 718 RLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFG 797 (1303)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 797 (1303)
+++...++.+..+...++.+++...+..+.++++..+++....... ......++++++++.++..++.+++.++..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~----~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~ 204 (694)
T TIGR01846 129 WFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG----LSTLSVLALAMLAVAIFEPALGGLRTYLFA 204 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333344444444455555555556667777777776653221 123334455566666778888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 798 IMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLA 877 (1303)
Q Consensus 798 ~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~ 877 (1303)
..+.++..++|.++|++++++|+.||+. .++|++++|+ +|++.+++++...+...+.+++.+++.++++++++|.++
T Consensus 205 ~~~~~~~~~l~~~~~~~l~~l~~~~f~~--~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 281 (694)
T TIGR01846 205 HLTSRIDVELGARLYRHLLGLPLGYFES--RRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLT 281 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHcCC--CCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999975 6899999999 699999999988777777777777777888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 878 LVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAI 957 (1303)
Q Consensus 878 l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 957 (1303)
+++++++|++++.........++..++..+...+.+..+.|+++|+++||+++.|+.+.++|++...+..+...+.....
T Consensus 282 li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (694)
T TIGR01846 282 GVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLG 361 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888777776666666667777777888899999999999999999999999999999999888888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCC
Q 000751 958 GFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKI 1037 (1303)
Q Consensus 958 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 1037 (1303)
.....+..++..+..++++++|++++..|.+++|.+++...+......++.........+..+..+++|+.++++.+++.
T Consensus 362 ~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~ 441 (694)
T TIGR01846 362 NIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEP 441 (694)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 77777778888888889999999999999999999988888777788888888888888899999999999998765432
Q ss_pred CCCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECC
Q 000751 1038 DPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDG 1117 (1303)
Q Consensus 1038 ~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG 1117 (1303)
+.. .....+...|.|+|+||+|+|++.. +++|+|+||+|+|||++||||+||||||||+++|.|+|+|++|+|++||
T Consensus 442 ~~~--~~~~~~~~~~~i~~~~vsf~y~~~~-~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg 518 (694)
T TIGR01846 442 RSA--GLAALPELRGAITFENIRFRYAPDS-PEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDG 518 (694)
T ss_pred cCC--CCCCCCCCCCeEEEEEEEEEcCCCC-ccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 211 1111223357899999999997542 3599999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHH
Q 000751 1118 RDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQ 1197 (1303)
Q Consensus 1118 ~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1197 (1303)
+|+++++.+++|++|+||||||++|+|||||||.++.+++++++++++++.++++++++++|+|+||.+|++|.+|||||
T Consensus 519 ~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq 598 (694)
T TIGR01846 519 VDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQ 598 (694)
T ss_pred EehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHH
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHH
Q 000751 1198 KQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1198 rQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||||+||||++++|+|||||||||+||+++|+.+.+.|++..+ ++|+|+||||+++++.||+|++|++|+|+|.|+|+|
T Consensus 599 ~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~ 677 (694)
T TIGR01846 599 RQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICR-GRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEE 677 (694)
T ss_pred HHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhC-CCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999998754 699999999999999999999999999999999999
Q ss_pred HhhcCchhHHHHhhhh
Q 000751 1278 LLAKNGLYVRLMQPHY 1293 (1303)
Q Consensus 1278 Ll~~~g~y~~l~~~~~ 1293 (1303)
|++++|.|++|+++|.
T Consensus 678 l~~~~~~y~~l~~~~~ 693 (694)
T TIGR01846 678 LLALQGLYARLWQQQS 693 (694)
T ss_pred HHHcCChHHHHHHhhc
Confidence 9999999999998764
No 40
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=5.2e-79 Score=767.90 Aligned_cols=503 Identities=24% Similarity=0.318 Sum_probs=445.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 000751 40 AGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATF 119 (1303)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~ 119 (1303)
.++..++.++..+.....+.++..++|.++|+++++.|+++|++. ++|++++|+++|++.+++++.+.+..++.++..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~ 153 (592)
T PRK10790 75 QLLAAGLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSAFDTQ-PVGQLISRVTNDTEVIRDLYVTVVATVLRSAALI 153 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334556677777788888999999999999999999999999985 8899999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHH
Q 000751 120 FSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATS 199 (1303)
Q Consensus 120 ~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~ 199 (1303)
++.++++++++|.+++++++++|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+.
T Consensus 154 ~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~ 233 (592)
T PRK10790 154 GAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEA 233 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHH
Confidence 99999999999999999888888888777778888888888888888899999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 200 LQATLRYGILISLVQGLG-LGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGR 278 (1303)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 278 (1303)
.++..+...+.....++. ..+..++..+..++++++++. +.+|.+++|.+++++.+...+..|+..+...+..++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~ 312 (592)
T PRK10790 234 SRSHYMARMQTLRLDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAV 312 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887777666655554432 223333333222223333334 579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHh
Q 000751 279 IAAYRLYEMISRSSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLME 358 (1303)
Q Consensus 279 ~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~ 358 (1303)
.+++|+.++++.++++... ...+...+.|+|+||+|+|++ ++++|+|+||+|++||++||||+||||||||+++|+
T Consensus 313 ~s~~ri~~~l~~~~~~~~~--~~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~ 388 (592)
T PRK10790 313 VAGERVFELMDGPRQQYGN--DDRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLM 388 (592)
T ss_pred HHHHHHHHHhcCCCccCCC--CccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHh
Confidence 9999999999765432111 111223457999999999973 357999999999999999999999999999999999
Q ss_pred ccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcccccCc
Q 000751 359 RFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLEKGYET 438 (1303)
Q Consensus 359 ~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t 438 (1303)
|+|+|++|+|.+||+|+++++.+++|++|+||||+|++|++||+|||.+|+++++++++++++.++++++++++|+|+||
T Consensus 389 gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt 468 (592)
T PRK10790 389 GYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYT 468 (592)
T ss_pred cccCCCCceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEe
Q 000751 439 QVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMD 518 (1303)
Q Consensus 439 ~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~ 518 (1303)
.+||+|.+|||||||||+|||||+++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||++.++.||+|++|+
T Consensus 469 ~i~e~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~ 548 (592)
T PRK10790 469 PLGEQGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLH 548 (592)
T ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred CceEeeccChHHHhhcChhHHHHHHHHHhc
Q 000751 519 EGRLFEMGTHDELLATGDLYAELLKCEEAA 548 (1303)
Q Consensus 519 ~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 548 (1303)
+|++++.|+|+||+++++.|+++++.+...
T Consensus 549 ~G~i~~~G~~~~L~~~~~~y~~l~~~~~~~ 578 (592)
T PRK10790 549 RGQAVEQGTHQQLLAAQGRYWQMYQLQLAG 578 (592)
T ss_pred CCEEEEEcCHHHHHhCCCHHHHHHHHHhhh
Confidence 999999999999999999999999877543
No 41
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.7e-79 Score=780.76 Aligned_cols=528 Identities=29% Similarity=0.414 Sum_probs=474.3
Q ss_pred hHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHH
Q 000751 14 KFVDCLVVAFGVEVWLSELALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQ 93 (1303)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr 93 (1303)
.++|.++..... ..+..+++.++++.++.+++.+++.++....+.++..++|.++|+|++++|+.+|+++ ++|++++|
T Consensus 164 ~iid~v~~~~~~-~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~-~~g~~~~r 241 (694)
T TIGR01846 164 VVIDKVLVHRGL-STLSVLALAMLAVAIFEPALGGLRTYLFAHLTSRIDVELGARLYRHLLGLPLGYFESR-RVGDTVAR 241 (694)
T ss_pred HHHHHhhccCCh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHcCCC-CHHHHHHH
Confidence 445555433221 2222333334444555667788888888889999999999999999999999999985 89999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 94 VLSDVLLIQSALSEKVGNYIHNMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIA 173 (1303)
Q Consensus 94 ~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (1303)
+ +|++.+++++...+...+.++...++.++++++++|.+++++++.+|+++++..++.+..++..++.++..++.++.+
T Consensus 242 l-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (694)
T TIGR01846 242 V-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFL 320 (694)
T ss_pred h-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 799999999998888888888888888889999999999999999999988888888888888888889999999999
Q ss_pred HHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHH
Q 000751 174 EQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTA 253 (1303)
Q Consensus 174 ~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~ 253 (1303)
.|.++|+++||+||.|+.+.++|.+..++..+...+......+...+..++..+..++++|+|++++.+|.+|+|.++++
T Consensus 321 ~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~ 400 (694)
T TIGR01846 321 VESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAF 400 (694)
T ss_pred HHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHH
Confidence 99999999999999999999999999999988888888888777777777777788888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEE
Q 000751 254 LFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRSSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLT 333 (1303)
Q Consensus 254 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~ 333 (1303)
..+...+..|+..+...+..+++++.+.+|+.++++.+++.........+...+.|+|+||+|+|++. ++++|+|+||+
T Consensus 401 ~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~ 479 (694)
T TIGR01846 401 NMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSAGLAALPELRGAITFENIRFRYAPD-SPEVLSNLNLD 479 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCeEEEEEEEEEcCCC-CccccccceEE
Confidence 99999999999999999999999999999999999876543221111122335679999999999642 45799999999
Q ss_pred eeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCC
Q 000751 334 VPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DAT 412 (1303)
Q Consensus 334 i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~ 412 (1303)
|++||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++|+||+|+|++|++||+|||.+++ +++
T Consensus 480 i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~ 559 (694)
T TIGR01846 480 IKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAP 559 (694)
T ss_pred ECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987 789
Q ss_pred HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh
Q 000751 413 LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLL 492 (1303)
Q Consensus 413 ~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~ 492 (1303)
+++++++++.+++++++.++|+|+||.+|++|.+|||||||||+||||++++|+|||||||||+||+++++.+.+.|++.
T Consensus 560 ~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~ 639 (694)
T TIGR01846 560 FEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREI 639 (694)
T ss_pred HHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhcChhHHHHHHHH
Q 000751 493 MLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLATGDLYAELLKCE 545 (1303)
Q Consensus 493 ~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 545 (1303)
.+++|+|+||||+++++.||+|++|++|+|++.|+|++|+++++.|+++++.|
T Consensus 640 ~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 692 (694)
T TIGR01846 640 CRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLALQGLYARLWQQQ 692 (694)
T ss_pred hCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHcCChHHHHHHhh
Confidence 88999999999999999999999999999999999999999999999998754
No 42
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.2e-78 Score=754.21 Aligned_cols=506 Identities=25% Similarity=0.355 Sum_probs=457.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000751 39 IAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMAT 118 (1303)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~ 118 (1303)
+.++.+++.++..++....+.++..++|.++|++++++|+.+|+++ ++|++++|+++|++.++..+...+..++..++.
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~-~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~ 123 (569)
T PRK10789 45 IAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRH-RTGDLMARATNDVDRVVFAAGEGVLTLVDSLVM 123 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-CHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 3344556677777777888999999999999999999999999985 889999999999999998888888888877666
Q ss_pred HHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHH
Q 000751 119 FFSGLAIA-FVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYA 197 (1303)
Q Consensus 119 ~~~~~~~~-~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~ 197 (1303)
+++.++++ ++++|.+++++++++|+++++...+.++.++..++.++..+++.+.+.|.++|+++||+|++|+.+.++|.
T Consensus 124 ~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~ 203 (569)
T PRK10789 124 GCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFA 203 (569)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHH
Confidence 66666655 58999999999999999988888888888888888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 198 TSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQG 277 (1303)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 277 (1303)
+..++..+...+.....+....+...+..++.++++++|++++.+|.+|+|.++++..+...+..|+..+...+..++.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~ 283 (569)
T PRK10789 204 ADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERG 283 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888888777777766666666666677778899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHH
Q 000751 278 RIAAYRLYEMISRSSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLM 357 (1303)
Q Consensus 278 ~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll 357 (1303)
+.+.+|+.++++.+++.... ....+...+.|+++||+|+|+. +++++|+|+||++++|++++|+||||||||||+++|
T Consensus 284 ~~a~~ri~~ll~~~~~~~~~-~~~~~~~~~~I~~~~v~~~y~~-~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll 361 (569)
T PRK10789 284 SAAYSRIRAMLAEAPVVKDG-SEPVPEGRGELDVNIRQFTYPQ-TDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLI 361 (569)
T ss_pred HHHHHHHHHHHcCCCcccCC-CCCCCCCCCcEEEEEEEEECCC-CCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHH
Confidence 99999999999876432211 1112223457999999999974 245799999999999999999999999999999999
Q ss_pred hccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhccccc
Q 000751 358 ERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGY 436 (1303)
Q Consensus 358 ~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~ 436 (1303)
+|+|+|++|+|.+||+++++++.+++|++|+||+|+|++|++|++|||.+++ ++++++++++++.+++++++.++|+|+
T Consensus 362 ~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl 441 (569)
T PRK10789 362 QRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGY 441 (569)
T ss_pred hcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcc
Confidence 9999999999999999999999999999999999999999999999999996 789999999999999999999999999
Q ss_pred CccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEE
Q 000751 437 ETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAV 516 (1303)
Q Consensus 437 ~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~ 516 (1303)
||.+|++|.+|||||||||+||||++++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||+++++.||+|++
T Consensus 442 ~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~ 521 (569)
T PRK10789 442 DTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILV 521 (569)
T ss_pred cceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999998889999999999999999999999
Q ss_pred EeCceEeeccChHHHhhcChhHHHHHHHHHh
Q 000751 517 MDEGRLFEMGTHDELLATGDLYAELLKCEEA 547 (1303)
Q Consensus 517 l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 547 (1303)
|++|++++.|+|++++++++.|+++++.|..
T Consensus 522 l~~G~i~~~g~~~~l~~~~~~y~~l~~~~~~ 552 (569)
T PRK10789 522 MQHGHIAQRGNHDQLAQQSGWYRDMYRYQQL 552 (569)
T ss_pred EeCCEEEEecCHHHHHHcCChHHHHHHHhhh
Confidence 9999999999999999999999999987654
No 43
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.6e-77 Score=753.66 Aligned_cols=562 Identities=31% Similarity=0.462 Sum_probs=496.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 721 ELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMG 800 (1303)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 800 (1303)
...+..++.++++.+..++.+++.+..++++..+++..+... .......++++++++.++..++.+++.++..+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 82 (571)
T TIGR02203 7 SYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGR----DRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVS 82 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC----chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445556666667777777777778888887777654322 1122333344566677777888889999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 801 EKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVA 880 (1303)
Q Consensus 801 ~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~ 880 (1303)
.++...+|..+++++++.|.++|++ .+.|++.+|+++|++.+++.+...+..++.+++.+++.++++++++|.+++++
T Consensus 83 ~~~~~~lr~~l~~~~~~~~~~~~~~--~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~ 160 (571)
T TIGR02203 83 NKVVRDIRVRMFEKLLGLPVSFFDR--QPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIV 160 (571)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 9999999999999999999999975 67899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 881 LATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFA 960 (1303)
Q Consensus 881 l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 960 (1303)
+++.|+.++......+..+...++.++...+....+.|.++|+++||+++.++++.++|++..++..+...+.....+..
T Consensus 161 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (571)
T TIGR02203 161 VVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSIS 240 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888777777787888888889999999999999999999999999999999999999888888877777777
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 000751 961 FGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPD 1040 (1303)
Q Consensus 961 ~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 1040 (1303)
..+...+..++.++++++|+..+..|.+++|.+++...++.....++.........+.+...+.+|+.++++.+++.+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 320 (571)
T TIGR02203 241 SPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG 320 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 77778888888888999999999999999999998888888888888888888888999999999999988754432211
Q ss_pred CCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeC
Q 000751 1041 DSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDL 1120 (1303)
Q Consensus 1041 ~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di 1120 (1303)
. ...+...+.|+++||+|+|+++. .++|+|+||+|+|||+++|+|+||||||||+++|+|+|+|++|+|++||+|+
T Consensus 321 -~--~~~~~~~~~i~~~~v~f~y~~~~-~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i 396 (571)
T TIGR02203 321 -T--RAIERARGDVEFRNVTFRYPGRD-RPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDL 396 (571)
T ss_pred -C--CCCCCCCCeEEEEEEEEEcCCCC-CccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeH
Confidence 1 11112346799999999997643 4699999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHhhcceEEEccCCccCcccHHHHHHcCCC-CCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHH
Q 000751 1121 KLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARH-NASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQ 1199 (1303)
Q Consensus 1121 ~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~-~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1199 (1303)
++++.+++|++++||||+|++|+|||||||.++.+ +.++++++++++.+++++++.++|+|+||.+||+|.+|||||||
T Consensus 397 ~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQ 476 (571)
T TIGR02203 397 ADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQ 476 (571)
T ss_pred HhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHH
Confidence 99999999999999999999999999999999986 78999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHh
Q 000751 1200 RIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLL 1279 (1303)
Q Consensus 1200 RlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl 1279 (1303)
|||||||++++|+|||||||||+||+++++.+.+.|++..+ ++|+|+||||++.+..||+|++|++|++++.|+|++|+
T Consensus 477 RiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~-~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~ 555 (571)
T TIGR02203 477 RLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQ-GRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELL 555 (571)
T ss_pred HHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhC-CCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHH
Confidence 99999999999999999999999999999999999998755 69999999999999999999999999999999999999
Q ss_pred hcCchhHHHHhhhh
Q 000751 1280 AKNGLYVRLMQPHY 1293 (1303)
Q Consensus 1280 ~~~g~y~~l~~~~~ 1293 (1303)
++++.|++++..+.
T Consensus 556 ~~~~~~~~~~~~~~ 569 (571)
T TIGR02203 556 ARNGLYAQLHNMQF 569 (571)
T ss_pred HcCCHHHHHHHHhh
Confidence 99999999988664
No 44
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.1e-78 Score=683.21 Aligned_cols=506 Identities=24% Similarity=0.343 Sum_probs=424.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHH
Q 000751 777 IIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFI 856 (1303)
Q Consensus 777 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i 856 (1303)
..=++++...+..|......+.+..++...+|.++|+++...+..-..+ -.+|+++||+..|++.+|+.+-..+..++
T Consensus 63 ~VR~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r--~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~ 140 (573)
T COG4987 63 GVRGLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLR--YRSGDLLNRLVADVDALDNLYLRVIAPAV 140 (573)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHh--cChHhHHHHHHhhHHHHhhHHHHHHhhHH
Confidence 3335677888888999999999999999999999999999988876654 56899999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHH
Q 000751 857 QDSAAVIVAVIIGMLLEWRLALVALATLPIL-SLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKV 935 (1303)
Q Consensus 857 ~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~ 935 (1303)
..+...++..+...+++|.+++.+..++.+. ++.-.+..++-+++.+..........+.+.|.+.|....+.||+++.+
T Consensus 141 ~a~~~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~ 220 (573)
T COG4987 141 VALVLIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAY 220 (573)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHH
Confidence 8888888888877788888877665444333 333344455556677777888888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHH--hh
Q 000751 936 MELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPF--GL 1013 (1303)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 1013 (1303)
...+......+.+...+...+.++...+.+++..+..+..+.+.+-.+..|..+........ ...+..+....++ ..
T Consensus 221 ~~~l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~l-l~~f~~~eaf~~L~~~A 299 (573)
T COG4987 221 RTALEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALAL-LVIFAALEAFEPLAPGA 299 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHH-HHHHHHHHHHhhhcchh
Confidence 99999999888888888888877777777666666655333333344445554432222111 1212222222222 23
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCC
Q 000751 1014 APYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGS 1093 (1303)
Q Consensus 1014 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGS 1093 (1303)
..+..+...++.|+.++.+.+++...+.+ .. +.... .++++||+|+||+.+ +++|+|+||++++||||||+|||||
T Consensus 300 ~~~lgq~~~Sa~Rl~~i~~q~~e~~~~~~-~~-~~~~~-~l~~~~vsF~y~~~~-~~~L~~~~l~l~~GEkvAIlG~SGs 375 (573)
T COG4987 300 FQHLGQVIASARRLNDILDQKPEVTFPDE-QT-ATTGQ-ALELRNVSFTYPGQQ-TKALKNFNLTLAQGEKVAILGRSGS 375 (573)
T ss_pred HHHhhHHHHHHHHHhhhccCCcccCCCcc-cc-CCccc-eeeeccceeecCCCc-cchhhccceeecCCCeEEEECCCCC
Confidence 35566777889999888887665443311 11 11112 799999999999764 4799999999999999999999999
Q ss_pred ChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHH
Q 000751 1094 GKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHH 1173 (1303)
Q Consensus 1094 GKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~ 1173 (1303)
||||++++|.|.|+|++|+|+++|.+++.++.+++|+.|++++|.++||++|+||||.+++|++||||+|++++++|+++
T Consensus 376 GKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~ 455 (573)
T COG4987 376 GKSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEK 455 (573)
T ss_pred CHHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCch
Q 000751 1174 FISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAA 1253 (1303)
Q Consensus 1174 ~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ 1253 (1303)
++++.|+||+|.+||+|.+||||||||+||||+||++++++||||||.+||++||++|.+.+.+..+ |||+|+||||+.
T Consensus 456 l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~ 534 (573)
T COG4987 456 LLESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR 534 (573)
T ss_pred HHHhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999876 699999999999
Q ss_pred hHhhcCEEEEEeCCEEEEecChHHHhhcCchhHHHHh
Q 000751 1254 MMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQ 1290 (1303)
Q Consensus 1254 ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~g~y~~l~~ 1290 (1303)
.++.||||+|||+|+++|+|+|.+|++++|.|+++++
T Consensus 535 ~le~~drIivl~~Gkiie~G~~~~Ll~~~g~~~~l~q 571 (573)
T COG4987 535 GLERMDRIIVLDNGKIIEEGTHAELLANNGRYKRLYQ 571 (573)
T ss_pred cHhhcCEEEEEECCeeeecCCHHhhhccccHHHHHhc
Confidence 9999999999999999999999999999999999986
No 45
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-78 Score=687.04 Aligned_cols=501 Identities=24% Similarity=0.291 Sum_probs=435.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000751 39 IAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMAT 118 (1303)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~ 118 (1303)
+++...+..|..++..+....++..++|.++|+++...++.-...+ ++||+++|+..||+.+++.+...+.+.+..++.
T Consensus 67 ~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~-r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~ 145 (573)
T COG4987 67 LAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRY-RSGDLLNRLVADVDALDNLYLRVIAPAVVALVL 145 (573)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhc-ChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHH
Confidence 3455566677888888888999999999999999999999999886 889999999999999999999999999999988
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHH
Q 000751 119 FFSGLAIAFVNCWQIALITLCTG-PFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYA 197 (1303)
Q Consensus 119 ~~~~~~~~~~~~~~l~l~~l~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~ 197 (1303)
..+..+.+-+++|.+++.+...+ .+++++..++.++-++..++..+..+.+.+.+.|.++|...++.||+++.+.+.+.
T Consensus 146 ~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~ 225 (573)
T COG4987 146 IAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALE 225 (573)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHH
Confidence 88887777789999886554433 33444556677777777778888889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 000751 198 TSLQATLRYGILISLVQGLGLGFTYGLAICSCA-LQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAA-TNFYSFD 275 (1303)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~-~~~~~~~ 275 (1303)
+....+.+...+...+..+...+..++..+..+ .++|.+ ..+..|..+......+++.++....++..+. ..+....
T Consensus 226 ~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a-~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lg 304 (573)
T COG4987 226 ATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMA-AQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLG 304 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhh
Confidence 999999999999888888877777766665555 445544 3445666664444444444444445555555 6677889
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHH
Q 000751 276 QGRIAAYRLYEMISRSSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIP 355 (1303)
Q Consensus 276 ~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ 355 (1303)
+...|+.|+.++++.+++...++.. .+..+..++++||||+||+ .+.++|+|+||++++||++||+|+||||||||++
T Consensus 305 q~~~Sa~Rl~~i~~q~~e~~~~~~~-~~~~~~~l~~~~vsF~y~~-~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllq 382 (573)
T COG4987 305 QVIASARRLNDILDQKPEVTFPDEQ-TATTGQALELRNVSFTYPG-QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQ 382 (573)
T ss_pred HHHHHHHHHhhhccCCcccCCCccc-cCCccceeeeccceeecCC-CccchhhccceeecCCCeEEEECCCCCCHHHHHH
Confidence 9999999999999988765433111 1212227999999999985 3568999999999999999999999999999999
Q ss_pred HHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhccc
Q 000751 356 LMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEK 434 (1303)
Q Consensus 356 ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~ 434 (1303)
+|.|.|+|++|+|.++|.+++.++.+.+|+.|++++|.++||++|+|||+++++ +++||+++++++.+++++++++.|+
T Consensus 383 Ll~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~ 462 (573)
T COG4987 383 LLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPD 462 (573)
T ss_pred HHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChh
Confidence 999999999999999999999999999999999999999999999999999998 9999999999999999999999999
Q ss_pred ccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEE
Q 000751 435 GYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYI 514 (1303)
Q Consensus 435 g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i 514 (1303)
|++|.+||.|.+||||||||+||||+|++|+|++||||||.+||++||+++.+.+.+..+|||+|+||||+..++.+|+|
T Consensus 463 gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drI 542 (573)
T COG4987 463 GLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRI 542 (573)
T ss_pred hhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCceEeeccChHHHhhcChhHHHHHH
Q 000751 515 AVMDEGRLFEMGTHDELLATGDLYAELLK 543 (1303)
Q Consensus 515 ~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 543 (1303)
+|||+|+|+++|+|++|++++|.|+++++
T Consensus 543 ivl~~Gkiie~G~~~~Ll~~~g~~~~l~q 571 (573)
T COG4987 543 IVLDNGKIIEEGTHAELLANNGRYKRLYQ 571 (573)
T ss_pred EEEECCeeeecCCHHhhhccccHHHHHhc
Confidence 99999999999999999999999999875
No 46
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=4.1e-77 Score=749.40 Aligned_cols=569 Identities=25% Similarity=0.370 Sum_probs=474.4
Q ss_pred hHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 715 SFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHF 794 (1303)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 794 (1303)
.+|+++.+.++.+..+.+.++..++..++....++++..+++...... ....+.+.++++.++..+..++..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (588)
T PRK13657 6 LYARVLQYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKG-------DIFPLLAAWAGFGLFNIIAGVLVAR 78 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-------cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355555555555566666666667777777777888888887654321 1112223333333444444444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 795 YFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEW 874 (1303)
Q Consensus 795 ~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~ 874 (1303)
+..+...++..+++.++|+++++.|..+|++ .+.|++++|+++|++.+.+.+...+..++..++.+++.++++++++|
T Consensus 79 ~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (588)
T PRK13657 79 HADRLAHRRRLAVLTEYFERIIQLPLAWHSQ--RGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNW 156 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHCc--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556666666777789999999999999974 68899999999999999988887887777777888888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Q 000751 875 RLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHG 954 (1303)
Q Consensus 875 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1303)
.+++++++++|+..+......+..+...++..+...+....+.|.+.|+++||+|+.++.+.+++.+..++..+...+..
T Consensus 157 ~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (588)
T PRK13657 157 RLSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVL 236 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888877666655555565666667777888899999999999999999999999999999988888777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcC
Q 000751 955 MAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRV 1034 (1303)
Q Consensus 955 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 1034 (1303)
...+....+.+++..+...+++++|++.+.+|.++++.++....++.....++.........+..+..++.++.++.+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~ 316 (588)
T PRK13657 237 SWWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAV 316 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 66666667777777788888899999999999999999888777777777777777777777888888888888887754
Q ss_pred CCCCCCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEE
Q 000751 1035 PKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVL 1114 (1303)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~ 1114 (1303)
++.+.. ......+...+.|+++||+|+||++ .++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 317 ~~~~~~-~~~~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~ 393 (588)
T PRK13657 317 PDVRDP-PGAIDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRIL 393 (588)
T ss_pred cccCCC-CCCCCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEE
Confidence 332111 1111112234679999999999753 2599999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCC
Q 000751 1115 LDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLT 1194 (1303)
Q Consensus 1115 idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1194 (1303)
+||+|+++++.+.+|++|+||||||++|+|||||||.+++++.+|++++++++.+++++++.++|+|+||.+|++|.+||
T Consensus 394 i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LS 473 (588)
T PRK13657 394 IDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLS 473 (588)
T ss_pred ECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCC
Confidence 99999999999999999999999999999999999999988889999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecC
Q 000751 1195 PGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1195 gGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt 1274 (1303)
||||||||||||++++|+|||||||||+||+++|+.+.+.|++..+ ++|+|+||||+++++.||+|++|++|+++|.|+
T Consensus 474 gGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~-~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~ 552 (588)
T PRK13657 474 GGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMK-GRTTFIIAHRLSTVRNADRILVFDNGRVVESGS 552 (588)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEEecHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999999998754 699999999999999999999999999999999
Q ss_pred hHHHhhcCchhHHHHhhhhhcc
Q 000751 1275 HDSLLAKNGLYVRLMQPHYGKG 1296 (1303)
Q Consensus 1275 ~~eLl~~~g~y~~l~~~~~~~~ 1296 (1303)
|++|+++++.|++++.++..+.
T Consensus 553 ~~~l~~~~~~y~~l~~~~~~~~ 574 (588)
T PRK13657 553 FDELVARGGRFAALLRAQGMLQ 574 (588)
T ss_pred HHHHHHCCChHHHHHHHhhccc
Confidence 9999999999999998765443
No 47
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-78 Score=688.59 Aligned_cols=508 Identities=30% Similarity=0.380 Sum_probs=433.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHH
Q 000751 34 LYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYI 113 (1303)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~ 113 (1303)
+.+++..++..++..++.+.+..+.+++..+.-.++|+|+++++.++|.+. .+|++.+.+......|..++.-.+..++
T Consensus 78 ~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~-~tG~l~~~idRgsraI~~vl~~~V~~i~ 156 (591)
T KOG0057|consen 78 AGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSR-GTGALNRIIDRGSRAISFVLSAMVFNII 156 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCC-CcchHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 334445566778888888899999999999999999999999999999985 8899999999999999888776666666
Q ss_pred HHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHH
Q 000751 114 HNMATFFSGLAIA-FVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLA 192 (1303)
Q Consensus 114 ~~~~~~~~~~~~~-~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~ 192 (1303)
..++-.......+ .-.....+++.+.....+..+.+....+..+..+++.++...+...+-|.+.+-.+||+||.|+++
T Consensus 157 p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~E 236 (591)
T KOG0057|consen 157 PTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYE 236 (591)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHH
Confidence 5544333332222 234455566665555555555555666666777778888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 193 KYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFY 272 (1303)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~ 272 (1303)
.++|.....++.+.+.+.....++....-..+.....+.+.+.|..-+.+|++|.|+++........+..|+..+...+.
T Consensus 237 a~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr 316 (591)
T KOG0057|consen 237 ASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYR 316 (591)
T ss_pred HHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999998887776666555444444445556666677777889999999999998899999999999999998
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHH
Q 000751 273 SFDQGRIAAYRLYEMISRSSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSS 352 (1303)
Q Consensus 273 ~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKST 352 (1303)
.+.++..-+.-++...+...+..+. ..+....++.|+|+||+|+|+ +++++|+++||+|++||++||||+|||||||
T Consensus 317 ~~~q~l~Dm~~~~~l~~~~~~i~~~-~~~i~~~~~~I~F~dV~f~y~--~k~~iL~gvsf~I~kGekVaIvG~nGsGKST 393 (591)
T KOG0057|consen 317 ELRQALTDMRTLFILLEVDEDIQEA-ALPIELFGGSIEFDDVHFSYG--PKRKVLKGVSFTIPKGEKVAIVGSNGSGKST 393 (591)
T ss_pred HHHHHHHhHHHHHhhhhhhhhhhhc-cCCcccCCCcEEEEeeEEEeC--CCCceecceeEEecCCCEEEEECCCCCCHHH
Confidence 8888877766665544332222111 112223456799999999996 4567999999999999999999999999999
Q ss_pred HHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHh
Q 000751 353 IIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISS 431 (1303)
Q Consensus 353 l~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~ 431 (1303)
++++|+||++ ++|+|+|||+|+++++++++|+.|||||||..||++||.+||.+|+ ++++|++.++|+.+++||-+.+
T Consensus 394 ilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~ 472 (591)
T KOG0057|consen 394 ILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISR 472 (591)
T ss_pred HHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHh
Confidence 9999999999 9999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred cccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccccc
Q 000751 432 LEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNA 511 (1303)
Q Consensus 432 l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~ 511 (1303)
+|+||+|.|||+|..||||||||||||||++|||||++||||||+||.+||+.+.+.+.....+||+|+|.||+++++.+
T Consensus 473 l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~ 552 (591)
T KOG0057|consen 473 LPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDF 552 (591)
T ss_pred ccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred CEEEEEeCceEeeccChHHHhhcChhHHHHHHHHH
Q 000751 512 DYIAVMDEGRLFEMGTHDELLATGDLYAELLKCEE 546 (1303)
Q Consensus 512 d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 546 (1303)
|+|+++++|++.+.|+|+||++.++.|+++|..|.
T Consensus 553 DkI~~l~nG~v~e~gth~ell~~s~~~~~~w~~~~ 587 (591)
T KOG0057|consen 553 DKIIVLDNGTVKEYGTHSELLAPSELYADLWTTQT 587 (591)
T ss_pred CEEEEEECCeeEEeccHHHHhhhhhHHHHHhcccc
Confidence 99999999999999999999998899999998664
No 48
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.2e-77 Score=754.82 Aligned_cols=507 Identities=31% Similarity=0.475 Sum_probs=468.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000751 36 IVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHN 115 (1303)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~ 115 (1303)
++++.++.+++.++..++....+.++...+|..+++++++.|.+++++. +.|++++|+++|++.+++++.+.+..++.+
T Consensus 60 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~~~~~~~~~~~-~~g~~~~~l~~di~~i~~~~~~~~~~~i~~ 138 (571)
T TIGR02203 60 VIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLLGLPVSFFDRQ-PTGTLLSRITFDSEQVASAATDAFIVLVRE 138 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555667778888888889999999999999999999999999985 889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHH
Q 000751 116 MATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYS 195 (1303)
Q Consensus 116 ~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~ 195 (1303)
+..+++.++++++++|.+++++++..|+++++..++.++.++..++.++..++..+.+.|.++|+++||+++.++.+.++
T Consensus 139 ~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~ 218 (571)
T TIGR02203 139 TLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRR 218 (571)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHH
Confidence 99999999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 196 YATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFD 275 (1303)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~ 275 (1303)
|.+..++..+...+.....++...+..++..+..++++++|++++.+|.+|+|.++++..++..+..|+..+...+..++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~ 298 (571)
T TIGR02203 219 FDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQ 298 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888888887777777777777788889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHH
Q 000751 276 QGRIAAYRLYEMISRSSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIP 355 (1303)
Q Consensus 276 ~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ 355 (1303)
+++.+.+|+.++++.+++..... ...++..+.|+++||+|+|++. ++++|+|+||+|++||+++|+|+||||||||++
T Consensus 299 ~~~~~~~ri~~~l~~~~~~~~~~-~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~ 376 (571)
T TIGR02203 299 RGLAAAESLFTLLDSPPEKDTGT-RAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVN 376 (571)
T ss_pred HHHHHHHHHHHHHcCCCCCCCCC-CCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHH
Confidence 99999999999998664432111 1112234579999999999753 457999999999999999999999999999999
Q ss_pred HHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC--CCCHHHHHHHHHHhcchHHHHhcc
Q 000751 356 LMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR--DATLDQIEEAAKIAHAHTFISSLE 433 (1303)
Q Consensus 356 ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~--~~~~~~~~~~~~~~~~~~~i~~l~ 433 (1303)
+|+|+|+|++|+|.+||+|+++++.+++|++|+||||+|++|++||+|||.+++ +.++++++++++.|++++++.++|
T Consensus 377 lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp 456 (571)
T TIGR02203 377 LIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLP 456 (571)
T ss_pred HHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCc
Confidence 999999999999999999999999999999999999999999999999999995 689999999999999999999999
Q ss_pred cccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCE
Q 000751 434 KGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADY 513 (1303)
Q Consensus 434 ~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~ 513 (1303)
+|+||.+||+|.+|||||||||+||||++++|+|+|||||||+||+++++.+.+.|.+..+++|+|+||||++.++.||+
T Consensus 457 ~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ 536 (571)
T TIGR02203 457 LGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADR 536 (571)
T ss_pred CcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCE
Confidence 99999999999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred EEEEeCceEeeccChHHHhhcChhHHHHHHHH
Q 000751 514 IAVMDEGRLFEMGTHDELLATGDLYAELLKCE 545 (1303)
Q Consensus 514 i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 545 (1303)
|++|++|++++.|+|++++++++.|+++++.+
T Consensus 537 ii~l~~g~i~~~g~~~~l~~~~~~~~~~~~~~ 568 (571)
T TIGR02203 537 IVVMDDGRIVERGTHNELLARNGLYAQLHNMQ 568 (571)
T ss_pred EEEEeCCEEEeeCCHHHHHHcCCHHHHHHHHh
Confidence 99999999999999999999999999987754
No 49
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=4e-78 Score=750.39 Aligned_cols=462 Identities=22% Similarity=0.264 Sum_probs=416.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 000751 40 AGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATF 119 (1303)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~ 119 (1303)
.++..++.++..++....+.++..++|.++|+|++++|..+|+++ ++|++++|+++|++.+++.+...+..++.++..+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~-~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~ 141 (529)
T TIGR02868 63 GIGRAVFRYLERLVGHDAALRSLGRLRVRVYDRLARLALAGRRRF-QTGDLLGRLGADVDALQDLYVRVIVPLVVALVVG 141 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccC-ChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556677788888888999999999999999999999999985 8899999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHH
Q 000751 120 FSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIF-LHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYAT 198 (1303)
Q Consensus 120 ~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~ 198 (1303)
++.++++++++|.+++++++.+|++.++...+.++ .++..++.++..++..+.+.|.++|+++||+|++|+.+.++|++
T Consensus 142 ~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~ 221 (529)
T TIGR02868 142 SAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEA 221 (529)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHH
Confidence 99999999999999999988878776655444444 45556777788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 199 SLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGR 278 (1303)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 278 (1303)
..++..+...+.....+...++..++..+..++++++|++++.+|.+++|.+++++.+...+..|+..+...+..+++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 301 (529)
T TIGR02868 222 ADRELLAAERRAARATGLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVR 301 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888888888777777777777788888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCCCCCC---CCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHH
Q 000751 279 IAAYRLYEMISRSSSTTNYDG---NTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIP 355 (1303)
Q Consensus 279 ~a~~ri~~~l~~~~~~~~~~~---~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ 355 (1303)
.+.+|+.++++.+++..+... ...++..+.|+|+||+|+|++ ++++|+|+||+|++||++|||||||||||||++
T Consensus 302 ~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~--~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~ 379 (529)
T TIGR02868 302 AAAERIEEVTGAKGPRPEGVVPAAGALGLGKPTLELRDLSFGYPG--SPPVLDGVSLDLPPGERVAILGPSGSGKSTLLM 379 (529)
T ss_pred HHHHHHHHHhcCCCCcCCCCCCCCcccCCCCceEEEEEEEEecCC--CCceeecceEEEcCCCEEEEECCCCCCHHHHHH
Confidence 999999999987653221111 011123457999999999974 346999999999999999999999999999999
Q ss_pred HHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhccc
Q 000751 356 LMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEK 434 (1303)
Q Consensus 356 ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~ 434 (1303)
+|+|+|+|++|+|.+||+|++++ .+++|++|+||||+|+||++||+|||++|+ +++++++++|++.|++++|+.+||+
T Consensus 380 lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~ 458 (529)
T TIGR02868 380 LLTGLLDPLQGEVTLDGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPD 458 (529)
T ss_pred HHhcCCCCCCcEEEECCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcc
Confidence 99999999999999999999999 999999999999999999999999999997 7899999999999999999999999
Q ss_pred ccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 000751 435 GYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRL 505 (1303)
Q Consensus 435 g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~ 505 (1303)
||||.+||+|.+||||||||||||||++++|+|||||||||+||+++|+.|++.+.+..+++|+|+||||+
T Consensus 459 GldT~ige~G~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 459 GLDTVLGEGGARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred cccchhccccCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999988999999999996
No 50
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3.1e-76 Score=737.02 Aligned_cols=566 Identities=25% Similarity=0.360 Sum_probs=475.7
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 716 FWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFY 795 (1303)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 795 (1303)
+++++++.++.++.+.++++++++..++..+.+++++.+++....... ...+.++++++.++..+..++..++
T Consensus 7 ~~~l~~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (585)
T TIGR01192 7 YVRALSYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD-------VLPTLALWAGFGVFNTIAYVLVARE 79 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555666666677777778888888888999988887653220 1112222223344445555555556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 796 FGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWR 875 (1303)
Q Consensus 796 ~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~ 875 (1303)
......++..++|.++|++++++|++||++ +++|++++|+++|++.+.+.+...+..++..++++++.+++++.++|.
T Consensus 80 ~~~~~~~~~~~lr~~~~~~l~~l~~~~~~~--~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 157 (585)
T TIGR01192 80 ADRLAHGRRATLLTEAFGRIISMPLSWHQQ--RGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWR 157 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666667777778889999999999999975 678999999999999999998888888888888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 876 LALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGM 955 (1303)
Q Consensus 876 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1303)
+++++++++|++++.........+...++..+...+....+.|.++|+++||+|+.++.+.+++.+..++..+...+...
T Consensus 158 l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (585)
T TIGR01192 158 LSIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLD 237 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888777766665556656666667777888999999999999999999999999999988888777776666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCC
Q 000751 956 AIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVP 1035 (1303)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 1035 (1303)
..+....+...+..+..++++++|++++.+|.+++|.+++...+......++.........+..+..+..++.++.+.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~ 317 (585)
T TIGR01192 238 WWALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVF 317 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 66666666667777778888899999999999999998887777776777777777777777888889999988887543
Q ss_pred CCCCCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEE
Q 000751 1036 KIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLL 1115 (1303)
Q Consensus 1036 ~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~i 1115 (1303)
+.+... .....+...+.|+|+||+|+|++.. ++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|++
T Consensus 318 ~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~~--~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~ 394 (585)
T TIGR01192 318 QREEPA-DAPELPNVKGAVEFRHITFEFANSS--QGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILI 394 (585)
T ss_pred cccCCc-cCCCCCCCCCeEEEEEEEEECCCCC--ccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEE
Confidence 321111 1111122346799999999997532 4899999999999999999999999999999999999999999999
Q ss_pred CCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCCh
Q 000751 1116 DGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTP 1195 (1303)
Q Consensus 1116 dG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1195 (1303)
||.|+++++.+.+|++++||||||++|++||+|||.++.++.++++++++++.+++++++.++|+|+||.+|++|.+|||
T Consensus 395 ~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSg 474 (585)
T TIGR01192 395 DGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSG 474 (585)
T ss_pred CCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCH
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecCh
Q 000751 1196 GQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTH 1275 (1303)
Q Consensus 1196 GQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~ 1275 (1303)
||||||+|||||+++|+|||||||||+||+++++.+++.|++... ++|+|+||||++++..||+|++|++|+++|.|+|
T Consensus 475 Gq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~-~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~ 553 (585)
T TIGR01192 475 GERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRK-NRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSF 553 (585)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhC-CCEEEEEEcChHHHHcCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999999998754 6999999999999999999999999999999999
Q ss_pred HHHhhcCchhHHHHhhhhh
Q 000751 1276 DSLLAKNGLYVRLMQPHYG 1294 (1303)
Q Consensus 1276 ~eLl~~~g~y~~l~~~~~~ 1294 (1303)
++|++++|.|++++..|..
T Consensus 554 ~~l~~~~~~y~~l~~~~~~ 572 (585)
T TIGR01192 554 QELIQKDGRFYKLLRRSGL 572 (585)
T ss_pred HHHHHCCChHHHHHHhCcc
Confidence 9999999999999987754
No 51
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=5.3e-77 Score=748.34 Aligned_cols=489 Identities=27% Similarity=0.400 Sum_probs=443.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000751 55 ILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLAIAFVNCWQIA 134 (1303)
Q Consensus 55 ~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 134 (1303)
.....++...+|.++|+|++++|+.+|++. ++|++++|+++|++.+.+.+...+..++..++.+++.++++++++|.++
T Consensus 81 ~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 159 (588)
T PRK13657 81 DRLAHRRRLAVLTEYFERIIQLPLAWHSQR-GSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLS 159 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHCcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455555666799999999999999985 8899999999999999998888888888888888888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 135 LITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQ 214 (1303)
Q Consensus 135 l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (1303)
+++++++|+.+++..++.++.++..++.++..++..+.+.|.++|+++||.|+.++.+.++|.+..++..+...+.....
T Consensus 160 l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (588)
T PRK13657 160 LVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWW 239 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888888888888888888888899999999999999999999999999999999999998888877777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 000751 215 GLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRSSST 294 (1303)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~ 294 (1303)
.+...+..++..+..++++++|++++.+|.+|+|.+++++.++..+..|+..+...+..+..++.+.+|+.++++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~ 319 (588)
T PRK13657 240 ALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDV 319 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 66666666677777778889999999999999999999999999999999999999999999999999999998765432
Q ss_pred CCCCCC-CCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCe
Q 000751 295 TNYDGN-TLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGE 373 (1303)
Q Consensus 295 ~~~~~~-~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~ 373 (1303)
+..... ..+...+.|+++||+|+||+ ++++|+|+||+++|||+++|+|+||||||||+++|+|+|+|++|+|.+||+
T Consensus 320 ~~~~~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~ 397 (588)
T PRK13657 320 RDPPGAIDLGRVKGAVEFDDVSFSYDN--SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGT 397 (588)
T ss_pred CCCCCCCCcCCCCCeEEEEEEEEEeCC--CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCE
Confidence 211111 11223357999999999973 346999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 374 NIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 374 ~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
|+++++.+++|++|+||||+|++|++||+|||++++ ++++++++++++.+++++++.++|+|+||.+|++|.+||||||
T Consensus 398 ~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~ 477 (588)
T PRK13657 398 DIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGER 477 (588)
T ss_pred EhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHH
Confidence 999999999999999999999999999999999997 7899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHh
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELL 532 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~ 532 (1303)
|||+||||++++|+|||||||||+||+++++.+.+.|.+..+++|+|+||||++.++.||+|++|++|++++.|+|++++
T Consensus 478 QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~ 557 (588)
T PRK13657 478 QRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELV 557 (588)
T ss_pred HHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred hcChhHHHHHHHHH
Q 000751 533 ATGDLYAELLKCEE 546 (1303)
Q Consensus 533 ~~~~~~~~~~~~~~ 546 (1303)
++++.|+++++.+.
T Consensus 558 ~~~~~y~~l~~~~~ 571 (588)
T PRK13657 558 ARGGRFAALLRAQG 571 (588)
T ss_pred HCCChHHHHHHHhh
Confidence 99999999998654
No 52
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=7.6e-77 Score=738.92 Aligned_cols=520 Identities=22% Similarity=0.254 Sum_probs=432.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 723 SFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEK 802 (1303)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 802 (1303)
.++.++.+++.+++.++...+..+.+++++.+++...... . ......+...++++.++..++.++..++..+.+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (529)
T TIGR02868 8 LQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMP--P--VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALR 83 (529)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--h--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444455555556666666666777777777554221 0 00011111122234556677788888888999999
Q ss_pred HHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 803 MTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALA 882 (1303)
Q Consensus 803 ~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~ 882 (1303)
+..++|.++|++++++|..||++ +++|++++|+++|++.++..+...+..++..+..++++++++++++|.+++++++
T Consensus 84 ~~~~lr~~~~~~ll~~~~~~~~~--~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~ 161 (529)
T TIGR02868 84 SLGRLRVRVYDRLARLALAGRRR--FQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAA 161 (529)
T ss_pred HHHHHHHHHHHHhhccCcccccc--CChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 99999999999999999999975 6889999999999999999999999888999999999999999999999999888
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 883 TLPILSLSA-IAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAF 961 (1303)
Q Consensus 883 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1303)
.+|++.+.. .+..+..+...++.++...+....+.|.++|+++||+|+.++.+.++|++..++..+...+.....+...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (529)
T TIGR02868 162 GLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGA 241 (529)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877765544 3333334445566667778888999999999999999999999999999999988888888777777777
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 000751 962 GFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDD 1041 (1303)
Q Consensus 962 ~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 1041 (1303)
.+..++..+...+++++|++++..|.++++.+.....+......++.........+.+...+.+|+.++++.+++.+...
T Consensus 242 ~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~ 321 (529)
T TIGR02868 242 AAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGV 321 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCC
Confidence 77777788888888899999999999999987776666666666666666667778888899999999987654322111
Q ss_pred CC-CCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeC
Q 000751 1042 SS-AVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDL 1120 (1303)
Q Consensus 1042 ~~-~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di 1120 (1303)
.. ....+...+.|+|+||+|+|++++ ++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+|+
T Consensus 322 ~~~~~~~~~~~~~I~~~~vsf~Y~~~~--~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i 399 (529)
T TIGR02868 322 VPAAGALGLGKPTLELRDLSFGYPGSP--PVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSV 399 (529)
T ss_pred CCCCcccCCCCceEEEEEEEEecCCCC--ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEh
Confidence 11 111112346799999999998543 599999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHH
Q 000751 1121 KLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQR 1200 (1303)
Q Consensus 1121 ~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1200 (1303)
+++ .+++|++|+||||||+||+|||||||.+|.|+++|+++++|++.|+++|||.++|+||||.+||+|.+||||||||
T Consensus 400 ~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQR 478 (529)
T TIGR02868 400 SSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQR 478 (529)
T ss_pred hhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHH
Confidence 999 9999999999999999999999999999999899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCc
Q 000751 1201 IAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRA 1252 (1303)
Q Consensus 1201 laLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl 1252 (1303)
||||||++++|+|||||||||+||++||+.|++.+++..+ ++|+|+||||+
T Consensus 479 iaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~-~~TvIiItHrl 529 (529)
T TIGR02868 479 LALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALS-GKTVVVITHHL 529 (529)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEecCC
Confidence 9999999999999999999999999999999999998754 69999999996
No 53
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=3.5e-76 Score=741.67 Aligned_cols=562 Identities=31% Similarity=0.493 Sum_probs=478.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 724 FAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKM 803 (1303)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 803 (1303)
+..+..+.+.++..++...+....++++..+++..+.... ......++.+++++.++..+..+++.++...++.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (576)
T TIGR02204 14 RPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDS----SGLLNRYFAFLLVVALVLALGTAARFYLVTWLGERV 89 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444455555666666677777788887776443221 112223344444555556677778888899999999
Q ss_pred HHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 804 TERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALAT 883 (1303)
Q Consensus 804 ~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~~ 883 (1303)
...+|..+++++++.|.++|+. .+.|++++|+++|++.+++.+...+..++..++.+++.++++++++|.+++++++.
T Consensus 90 ~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 167 (576)
T TIGR02204 90 VADIRRAVFAHLISLSPSFFDK--NRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLA 167 (576)
T ss_pred HHHHHHHHHHHHHcCCHHHHcc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999999999975 56899999999999999999988888888999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 884 LPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGF 963 (1303)
Q Consensus 884 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 963 (1303)
+|+.++.........++..++..+...+....+.|.++|+++||+++.++++.++|++..++..+...+..........+
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (576)
T TIGR02204 168 VPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAI 247 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877777766666777777788888888999999999999999999999999999999888777766666555555555
Q ss_pred HHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 000751 964 SQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSS 1043 (1303)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 1043 (1303)
...+.+++.++++++|++.+..|.++++.++....+......++.........+.++..+++|+.++++.+++.+.....
T Consensus 248 ~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~ 327 (576)
T TIGR02204 248 VIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHP 327 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCC
Confidence 55666667777888899999999999999887777777777778888888888899999999999998754332211111
Q ss_pred CCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCC
Q 000751 1044 AVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLY 1123 (1303)
Q Consensus 1044 ~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~ 1123 (1303)
...+.+..+.|+|+||+|+||++.+.++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|++||+|++++
T Consensus 328 ~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~ 407 (576)
T TIGR02204 328 KTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQL 407 (576)
T ss_pred ccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhc
Confidence 11111224679999999999864334699999999999999999999999999999999999999999999999999999
Q ss_pred CHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHH
Q 000751 1124 NLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAI 1203 (1303)
Q Consensus 1124 ~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaL 1203 (1303)
+.+++|++|+||||||++|+|||||||.++.|+.++++++++++.+++.++++++|+|+||.+||+|.+|||||||||+|
T Consensus 408 ~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~l 487 (576)
T TIGR02204 408 DPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAI 487 (576)
T ss_pred CHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHH
Confidence 99999999999999999999999999999998889999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcCc
Q 000751 1204 ARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNG 1283 (1303)
Q Consensus 1204 ARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~g 1283 (1303)
|||++++|+|||||||||+||+++++.+.+.+++..+ ++|+|+||||++.+..||+|++|++|+++|.|+|++|+++++
T Consensus 488 aRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~-~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~~~ 566 (576)
T TIGR02204 488 ARAILKDAPILLLDEATSALDAESEQLVQQALETLMK-GRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAKGG 566 (576)
T ss_pred HHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhC-CCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHcCC
Confidence 9999999999999999999999999999999998755 699999999999999999999999999999999999999999
Q ss_pred hhHHHHhhh
Q 000751 1284 LYVRLMQPH 1292 (1303)
Q Consensus 1284 ~y~~l~~~~ 1292 (1303)
.|++|+..|
T Consensus 567 ~~~~l~~~~ 575 (576)
T TIGR02204 567 LYARLARLQ 575 (576)
T ss_pred hHHHHHhhc
Confidence 999999865
No 54
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.9e-76 Score=736.52 Aligned_cols=542 Identities=23% Similarity=0.337 Sum_probs=463.4
Q ss_pred HHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000751 744 NPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWF 823 (1303)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ff 823 (1303)
..+.+++++.+++....... .......|+++++++.++..++.++..++....+.++..++|.++|++++++|++||
T Consensus 11 ~~~~p~~~~~iid~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~ 87 (569)
T PRK10789 11 QLIPPKVVGIIVDGVTEQHM---TTGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFY 87 (569)
T ss_pred HHHHHHHHHHHHHHhccCCc---chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 34455667777775543210 011233455555556666777788888888889999999999999999999999999
Q ss_pred ccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 824 DEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIG-MLLEWRLALVALATLPILSLSAIAQKLWLAGFS 902 (1303)
Q Consensus 824 d~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~-~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~ 902 (1303)
++ .++|++++|+++|++.++..+...+..++..++..+++++++ +.++|.+++++++++|++++......+...+..
T Consensus 88 ~~--~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~ 165 (569)
T PRK10789 88 LR--HRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERF 165 (569)
T ss_pred cC--CCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 74 679999999999999999877777777777666666555554 589999999999888888777666666666666
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000751 903 RGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKS 982 (1303)
Q Consensus 903 ~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1303)
++.++...+....+.|.+.|+++||+|+.++.+.++|.+..++..+...+.....+....+...+..++..+++++|+++
T Consensus 166 ~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l 245 (569)
T PRK10789 166 KLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWM 245 (569)
T ss_pred HHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777778888999999999999999999999999999998888887777777666666666666677777888999999
Q ss_pred hhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccEEEEeeEEE
Q 000751 983 VRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFC 1062 (1303)
Q Consensus 983 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~ 1062 (1303)
+.+|.+++|.+++...+......++.........+.++..+.+|+.++++.+++.+... ...+...+.|+|+||+|+
T Consensus 246 v~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~~~~~~~~~I~~~~v~~~ 322 (569)
T PRK10789 246 VVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS---EPVPEGRGELDVNIRQFT 322 (569)
T ss_pred HHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC---CCCCCCCCcEEEEEEEEE
Confidence 99999999998888877777777777777777888888999999999987654322111 111223468999999999
Q ss_pred CCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceEEEccCCccC
Q 000751 1063 YPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIF 1142 (1303)
Q Consensus 1063 Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~VpQdp~LF 1142 (1303)
|++. +.++|+|+||+|+|||++|||||||||||||+++|.|+|+|++|+|++||+|+++++.+++|++++||||+|++|
T Consensus 323 y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf 401 (569)
T PRK10789 323 YPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLF 401 (569)
T ss_pred CCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeec
Confidence 9753 236999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCC
Q 000751 1143 STTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSS 1222 (1303)
Q Consensus 1143 ~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSa 1222 (1303)
++||||||.++.++.++++++++++.+++++++.++|+|+||.+|++|.+||||||||++||||++++|+|||||||||+
T Consensus 402 ~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~ 481 (569)
T PRK10789 402 SDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSA 481 (569)
T ss_pred cccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcccc
Confidence 99999999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcCchhHHHHhhhhhc
Q 000751 1223 IESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQPHYGK 1295 (1303)
Q Consensus 1223 LD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~g~y~~l~~~~~~~ 1295 (1303)
||+++++.+++.|++... ++|+|+||||++++..||+|++|++|+++|.|+|++|++++|.|++++..|..+
T Consensus 482 LD~~~~~~i~~~l~~~~~-~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~~~~ 553 (569)
T PRK10789 482 VDGRTEHQILHNLRQWGE-GRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQQLE 553 (569)
T ss_pred CCHHHHHHHHHHHHHHhC-CCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHhhhc
Confidence 999999999999998754 699999999999999999999999999999999999999999999999876543
No 55
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=2e-76 Score=738.73 Aligned_cols=489 Identities=26% Similarity=0.382 Sum_probs=443.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000751 55 ILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLAIAFVNCWQIA 134 (1303)
Q Consensus 55 ~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 134 (1303)
.....++..++|.++|+|++++|++||+++ ++|++++|+++|++.+++++.+.+...+..++.+++.++++++++|.++
T Consensus 81 ~~~~~~~~~~lr~~~~~~l~~l~~~~~~~~-~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 159 (585)
T TIGR01192 81 DRLAHGRRATLLTEAFGRIISMPLSWHQQR-GTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLS 159 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555666799999999999999985 8899999999999999999998888888888888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 135 LITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQ 214 (1303)
Q Consensus 135 l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (1303)
+++++++|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.+++.+..++..+...+.....
T Consensus 160 li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (585)
T TIGR01192 160 IVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWW 239 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888888888888899999999999999999999999999999999999988888777777766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 000751 215 GLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRSSST 294 (1303)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~ 294 (1303)
++...+..++..+..++++++|++++.+|.+++|.+++++.+...+..|+..+...+..+..++.+.+|+.++++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~ 319 (585)
T TIGR01192 240 ALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQR 319 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 66666666666777778889999999999999999999999999999999999999999999999999999999865432
Q ss_pred CCCCC-CCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCe
Q 000751 295 TNYDG-NTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGE 373 (1303)
Q Consensus 295 ~~~~~-~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~ 373 (1303)
.+... ...+...+.|+++||+|+|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+|+|++|+|.+||.
T Consensus 320 ~~~~~~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~ 397 (585)
T TIGR01192 320 EEPADAPELPNVKGAVEFRHITFEFAN--SSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGI 397 (585)
T ss_pred cCCccCCCCCCCCCeEEEEEEEEECCC--CCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCE
Confidence 21111 111223456999999999963 346999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 374 NIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 374 ~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
|+++++.+++|++++||+|+|++|++|++|||.++. ++++++++++++.+++++++.++|+|++|.+|++|.+||||||
T Consensus 398 ~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~ 477 (585)
T TIGR01192 398 DINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGER 477 (585)
T ss_pred EhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHH
Confidence 999999999999999999999999999999999996 7899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHh
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELL 532 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~ 532 (1303)
|||+|||||+++|+|||||||||+||+++++.+.+.|++..+++|+|+||||+++++.||+|++|++|++++.|+|++++
T Consensus 478 qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~ 557 (585)
T TIGR01192 478 QRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELI 557 (585)
T ss_pred HHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hcChhHHHHHHHHH
Q 000751 533 ATGDLYAELLKCEE 546 (1303)
Q Consensus 533 ~~~~~~~~~~~~~~ 546 (1303)
++++.|+++++.+.
T Consensus 558 ~~~~~y~~l~~~~~ 571 (585)
T TIGR01192 558 QKDGRFYKLLRRSG 571 (585)
T ss_pred HCCChHHHHHHhCc
Confidence 99999999998653
No 56
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.4e-79 Score=667.65 Aligned_cols=492 Identities=29% Similarity=0.424 Sum_probs=421.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q 000751 794 FYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVI-VAVIIGMLL 872 (1303)
Q Consensus 794 ~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i-~~~~~~~~~ 872 (1303)
.++...++.+...+--+.|.|+.++++.|.-+ ..+|.+..-+.....-+...+...+...+..++-+. ++++++..+
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~--r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~ 81 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLE--RRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVY 81 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhh--cccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 45667778888888899999999999999865 345666655555665666666665655555555444 344556677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Q 000751 873 EWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFL 952 (1303)
Q Consensus 873 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~ 952 (1303)
+|+.+++.++++.+++++.+...-+...+.|..+..+.+++....+++-+.+|+|.|+.|+++..+|.+.++.+.+...+
T Consensus 82 ~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k 161 (497)
T COG5265 82 GWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIK 161 (497)
T ss_pred ccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHH
Confidence 99999999999999988888877788888999999999999999999999999999999999999999999999888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHh
Q 000751 953 HGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIID 1032 (1303)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 1032 (1303)
.....++.......+.......+...++..+..|.+++|++.....++.....++...-.....+.++...+++++++.+
T Consensus 162 ~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~ 241 (497)
T COG5265 162 VHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLD 241 (497)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhc
Confidence 77666666666666666677777788888899999999998776666555555544444444566677788888888877
Q ss_pred cCCCCCCCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccE
Q 000751 1033 RVPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQ 1112 (1303)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~ 1112 (1303)
.+.+.........-.+...|.|.|+||+|.|..+ .|+|+|+||++++|+++||||+||+||||+.++|+||||+++|.
T Consensus 242 ~~~~v~d~pda~~L~~~~~g~v~F~~V~F~y~~~--r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~ 319 (497)
T COG5265 242 VEAEVSDAPDAPPLWPVRLGAVAFINVSFAYDPR--RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGS 319 (497)
T ss_pred cchhhccCCCCccccccccceEEEEEEEeecccc--chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCce
Confidence 6544332211111112446889999999999654 46999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCC
Q 000751 1113 VLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVD 1192 (1303)
Q Consensus 1113 I~idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~ 1192 (1303)
|.|||+||+++..+.+|+.||+||||.+||+.|+..||.||+|+++++|+++|++.+++++||+++|+||||.|||+|-.
T Consensus 320 I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerglk 399 (497)
T COG5265 320 ITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLK 399 (497)
T ss_pred EEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEe
Q 000751 1193 LTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEE 1272 (1303)
Q Consensus 1193 LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~ 1272 (1303)
||||||||+||||++|++|+||+|||||||||.+||++||.+|+.... ++|.++|||||+|+.+||.|+||++|+|+|.
T Consensus 400 lSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~-~rttlviahrlsti~~adeiivl~~g~i~er 478 (497)
T COG5265 400 LSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSA-GRTTLVIAHRLSTIIDADEIIVLDNGRIVER 478 (497)
T ss_pred ccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhC-CCeEEEEeehhhhccCCceEEEeeCCEEEec
Confidence 999999999999999999999999999999999999999999999875 6999999999999999999999999999999
Q ss_pred cChHHHhhcCchhHHHHh
Q 000751 1273 GTHDSLLAKNGLYVRLMQ 1290 (1303)
Q Consensus 1273 Gt~~eLl~~~g~y~~l~~ 1290 (1303)
|+|+||+.++|.|++||.
T Consensus 479 g~h~~ll~~~g~ya~mw~ 496 (497)
T COG5265 479 GTHEELLAAGGLYAEMWR 496 (497)
T ss_pred CcHHHHHHcCChHHHHhc
Confidence 999999999999999996
No 57
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=2.8e-76 Score=742.58 Aligned_cols=507 Identities=34% Similarity=0.517 Sum_probs=457.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000751 38 YIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMA 117 (1303)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~ 117 (1303)
++.+...++.++..+.....+.++...+|..++++++++|..+|++. +.|++++|+++|++.+++++.+.+..++.++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~ 144 (576)
T TIGR02204 66 VVALVLALGTAARFYLVTWLGERVVADIRRAVFAHLISLSPSFFDKN-RSGEVVSRLTTDTTLLQSVIGSSLSMALRNAL 144 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHccC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444556667777778888999999999999999999999999984 88999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHH
Q 000751 118 TFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYA 197 (1303)
Q Consensus 118 ~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~ 197 (1303)
.+++.++++++++|.+++++++..|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.
T Consensus 145 ~~~~~~~~~~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~ 224 (576)
T TIGR02204 145 MCIGGLIMMFITSPKLTSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFG 224 (576)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHH
Confidence 99999999999999999999998898888888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 198 TSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQG 277 (1303)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 277 (1303)
+..++..+...+......+...+..++..+..++++++|++++.+|.+|+|.++++..+...+..|+..++..+..+..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~ 304 (576)
T TIGR02204 225 GAVEKAYEAARQRIRTRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRA 304 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988877777666666655555555556666777889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCCCCCC-CCC-CCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHH
Q 000751 278 RIAAYRLYEMISRSSSTTNYD-GNT-LPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIP 355 (1303)
Q Consensus 278 ~~a~~ri~~~l~~~~~~~~~~-~~~-~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ 355 (1303)
+.+.+|+.++++.+++..... ... ..+..+.|+++||+|+||+++++++|+|+||+++|||+++|+|+||||||||++
T Consensus 305 ~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlk 384 (576)
T TIGR02204 305 AGAAERLIELLQAEPDIKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQ 384 (576)
T ss_pred HHHHHHHHHHhCCCCcCCCCCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHH
Confidence 999999999998654321111 111 112234699999999997533367999999999999999999999999999999
Q ss_pred HHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhccc
Q 000751 356 LMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEK 434 (1303)
Q Consensus 356 ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~ 434 (1303)
+|+|+|+|++|+|.+||.|+++++.+++|++|+||||+|++|++||+|||.+++ +.++++++++++.++++++++++|+
T Consensus 385 lL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~ 464 (576)
T TIGR02204 385 LLLRFYDPQSGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPE 464 (576)
T ss_pred HHHhccCCCCCEEEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999987 6789999999999999999999999
Q ss_pred ccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEE
Q 000751 435 GYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYI 514 (1303)
Q Consensus 435 g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i 514 (1303)
|++|.+||+|.+|||||||||+||||++++|+|||||||||+||+++++.+.+.+++..+++|+|+||||++.++.+|+|
T Consensus 465 gl~t~i~~~g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~v 544 (576)
T TIGR02204 465 GYDTYLGERGVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRI 544 (576)
T ss_pred CCCceeCCCCCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEE
Confidence 99999999999999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred EEEeCceEeeccChHHHhhcChhHHHHHHHH
Q 000751 515 AVMDEGRLFEMGTHDELLATGDLYAELLKCE 545 (1303)
Q Consensus 515 ~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 545 (1303)
++|++|++++.|+|++++++++.|++++..|
T Consensus 545 i~l~~g~~~~~g~~~~l~~~~~~~~~l~~~~ 575 (576)
T TIGR02204 545 VVMDQGRIVAQGTHAELIAKGGLYARLARLQ 575 (576)
T ss_pred EEEECCEEEeeecHHHHHHcCChHHHHHhhc
Confidence 9999999999999999999999999988654
No 58
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.8e-76 Score=797.34 Aligned_cols=501 Identities=20% Similarity=0.234 Sum_probs=431.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000751 39 IAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMAT 118 (1303)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~ 118 (1303)
++++..++.++..++....+.+...++|.++++++++.|+.||+++ ++|++++|+++|++.+++.+...+..++..++.
T Consensus 1014 l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~-~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~ 1092 (1522)
T TIGR00957 1014 LGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERT-PSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFN 1092 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666677777788999999999999999999999999995 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHH
Q 000751 119 FFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYAT 198 (1303)
Q Consensus 119 ~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~ 198 (1303)
+++.++++++.+|.++++++.+++++.++..++.+..+...+...+..+.+.+.+.|+++|+++||+|++|+.+.+++.+
T Consensus 1093 ~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~ 1172 (1522)
T TIGR00957 1093 VIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDL 1172 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHH
Confidence 99999999988887766655444444444444444444444445566678889999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 199 SLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVT-HNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQG 277 (1303)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~-~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 277 (1303)
..+...+..........+......++.. ++++++|.+.+. .|.+++|.+.+++.+...+..|+..+...+..++.+
T Consensus 1173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~ 1249 (1522)
T TIGR00957 1173 KVDENQKAYYPSIVANRWLAVRLECVGN---CIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETN 1249 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888777766655555554444333322 233444555554 578999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCCCCC-CC-CCCC--CCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHH
Q 000751 278 RIAAYRLYEMISRSSSTTNY-DG-NTLP--SVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSI 353 (1303)
Q Consensus 278 ~~a~~ri~~~l~~~~~~~~~-~~-~~~~--~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl 353 (1303)
.+|++|+.++++.+++.... .+ ..++ +.++.|+|+||+|+|+++ ..++|+||||+|++||++||||+||||||||
T Consensus 1250 ~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL 1328 (1522)
T TIGR00957 1250 IVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSL 1328 (1522)
T ss_pred HHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHH
Confidence 99999999999776543211 11 1111 245789999999999743 3479999999999999999999999999999
Q ss_pred HHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcc
Q 000751 354 IPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLE 433 (1303)
Q Consensus 354 ~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 433 (1303)
+++|.|+|+|++|+|.+||+|+++++.+++|++|++|||||+||+|||||||....+++++++++|++.|+++++|.++|
T Consensus 1329 ~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp 1408 (1522)
T TIGR00957 1329 TLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALP 1408 (1522)
T ss_pred HHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCc
Confidence 99999999999999999999999999999999999999999999999999999555899999999999999999999999
Q ss_pred cccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCE
Q 000751 434 KGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADY 513 (1303)
Q Consensus 434 ~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~ 513 (1303)
+||||.|||+|.+|||||||||||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++..||+
T Consensus 1409 ~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~Dr 1488 (1522)
T TIGR00957 1409 DKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTR 1488 (1522)
T ss_pred cCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCE
Confidence 99999999999999999999999999999999999999999999999999999999999899999999999999999999
Q ss_pred EEEEeCceEeeccChHHHhhcChhHHHHHHH
Q 000751 514 IAVMDEGRLFEMGTHDELLATGDLYAELLKC 544 (1303)
Q Consensus 514 i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 544 (1303)
|+|||+|+|+|.|+|+||+++++.|+++++.
T Consensus 1489 IlVld~G~IvE~G~~~eLl~~~~~f~~l~~~ 1519 (1522)
T TIGR00957 1489 VIVLDKGEVAEFGAPSNLLQQRGIFYSMAKD 1519 (1522)
T ss_pred EEEEECCEEEEECCHHHHHhCCCHHHHHHHH
Confidence 9999999999999999999999999999874
No 59
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-77 Score=658.84 Aligned_cols=488 Identities=30% Similarity=0.427 Sum_probs=427.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhH
Q 000751 53 CWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFS-GLAIAFVNCW 131 (1303)
Q Consensus 53 ~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 131 (1303)
++...++.....+--+.|.|+.++++.|+-++ ++|.+...+....+-|+..+...+...+..++-+.. +.++...++|
T Consensus 5 ~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r-~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~ 83 (497)
T COG5265 5 LFSPVGQIAVRVLAYVTFFHLHSLSLRFHLER-RTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGW 83 (497)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcchhhhhhc-ccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhccc
Confidence 34556777777788899999999999999884 889987766666656655555444444444443333 3344456899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHH
Q 000751 132 QIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILIS 211 (1303)
Q Consensus 132 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 211 (1303)
+.+++.++++.+++++......+.....++..++.+++++...+++-+..++|.|+.|+.+..+|.+.++.+.+...+..
T Consensus 84 ~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~ 163 (497)
T COG5265 84 WFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVH 163 (497)
T ss_pred HHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHH
Confidence 99999888888887777777777667777778888999999999999999999999999999999999999999888876
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 000751 212 LVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRS 291 (1303)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 291 (1303)
.-..+....-..+.......+...+...+..|++|.|+++....+++....|+..++..+..+.+++.-.++.+++++.+
T Consensus 164 ~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~ 243 (497)
T COG5265 164 VSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVE 243 (497)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccc
Confidence 66555544444555556666677788889999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCC-CCCCC-CCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEE
Q 000751 292 SSTTNYD-GNTLP-SVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVL 369 (1303)
Q Consensus 292 ~~~~~~~-~~~~~-~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 369 (1303)
.+..+.. ..+.. ...+.+.|+||+|.|. +.+++|+++||++++|+++|||||||+||||++++|.|||++++|.|.
T Consensus 244 ~~v~d~pda~~L~~~~~g~v~F~~V~F~y~--~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~ 321 (497)
T COG5265 244 AEVSDAPDAPPLWPVRLGAVAFINVSFAYD--PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSIT 321 (497)
T ss_pred hhhccCCCCccccccccceEEEEEEEeecc--ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEE
Confidence 5443221 11122 3356799999999996 567999999999999999999999999999999999999999999999
Q ss_pred ECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCC
Q 000751 370 LDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALT 448 (1303)
Q Consensus 370 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LS 448 (1303)
+||+|+++...+++|+.||.||||..||++|+..||.+|+ +++++|+.++++.+++++||+.+|+||+|.|||+|..||
T Consensus 322 id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklS 401 (497)
T COG5265 322 IDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLS 401 (497)
T ss_pred EcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeecc
Confidence 9999999999999999999999999999999999999998 899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeCceEeeccCh
Q 000751 449 EEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTH 528 (1303)
Q Consensus 449 gGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~ 528 (1303)
||||||+||||+++++|+||+|||+|||||.+||+.|+.+|++..+|+|+++|+|||+++-+||.|+||++|+|+|.|+|
T Consensus 402 ggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h 481 (497)
T COG5265 402 GGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTH 481 (497)
T ss_pred CchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcChhHHHHHH
Q 000751 529 DELLATGDLYAELLK 543 (1303)
Q Consensus 529 ~~l~~~~~~~~~~~~ 543 (1303)
+||++.+|.|++||.
T Consensus 482 ~~ll~~~g~ya~mw~ 496 (497)
T COG5265 482 EELLAAGGLYAEMWR 496 (497)
T ss_pred HHHHHcCChHHHHhc
Confidence 999999999999985
No 60
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.1e-75 Score=728.48 Aligned_cols=505 Identities=24% Similarity=0.280 Sum_probs=440.2
Q ss_pred CChhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchh
Q 000751 10 FPVPKFVDCLVVAFGVEVWLSELALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGD 89 (1303)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~ 89 (1303)
+....++|.+.........+..++..+++++++..++.++..+.....+.++..++|.++|++++++|..+|+++ ++|+
T Consensus 24 ~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~ 102 (529)
T TIGR02857 24 WLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAVAALGPGWLQGR-PSGE 102 (529)
T ss_pred HHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccC-ChHH
Confidence 334456676532211212222333444445566677888888889999999999999999999999999999985 8999
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 90 IVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEA 169 (1303)
Q Consensus 90 l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (1303)
+++|+++|++.+++++...+..++..++.+++.++++++++|.+++++++..|+++++..++.++.++..++.++..++.
T Consensus 103 ~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (529)
T TIGR02857 103 LATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWAAQAAARKQWAALSRL 182 (529)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999889888877888888888888889999999
Q ss_pred HHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHH
Q 000751 170 ASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGE 249 (1303)
Q Consensus 170 ~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~ 249 (1303)
.+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..+.......+..++..+..+++++++++.+.+|.+|+|.
T Consensus 183 ~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~g~ 262 (529)
T TIGR02857 183 SGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAVYIGFRLLAGDLDLAT 262 (529)
T ss_pred HHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 99999999999999999999999999999988888877777666666555555555555555555677777799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccc
Q 000751 250 IVTALFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRSSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSG 329 (1303)
Q Consensus 250 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~ 329 (1303)
+++++.+...+..|+..+...+..+++++.+.+|+.++++.+++..+.. .......+.|+|+||+|+||+. ++++|+|
T Consensus 263 ~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~-~~~~~~~~~i~~~~v~f~y~~~-~~~il~~ 340 (529)
T TIGR02857 263 GLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA-PVTAAPAPSLEFSGLSVAYPGR-RAPALRP 340 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc-CCCCCCCCeEEEEEEEEECCCC-Ccccccc
Confidence 9999999989999999999999999999999999999997543221111 1111123479999999999743 3579999
Q ss_pred eeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC
Q 000751 330 FYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR 409 (1303)
Q Consensus 330 i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~ 409 (1303)
+||+|++|+++|||||||||||||+++|+|+|+|++|+|.+||.|+++++.+++|++|+||+|+|++|++||+|||.++.
T Consensus 341 i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~ 420 (529)
T TIGR02857 341 VSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVPQHPFLFAGTIAENIRLAR 420 (529)
T ss_pred eeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEcCCCcccCcCHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred -CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHH
Q 000751 410 -DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEA 488 (1303)
Q Consensus 410 -~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~ 488 (1303)
++++++++++++.++++++++++|+|+||.+||+|.+|||||||||+||||++++|+|+|||||||+||+++++.+.+.
T Consensus 421 ~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~ 500 (529)
T TIGR02857 421 PDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEA 500 (529)
T ss_pred CCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCeEEEEecCCccccccCEEEEE
Q 000751 489 LDLLMLGRSTIIIARRLSLIRNADYIAVM 517 (1303)
Q Consensus 489 l~~~~~~~t~i~ith~~~~~~~~d~i~~l 517 (1303)
+++..+++|+|+||||+++++.||+|++|
T Consensus 501 l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 501 LRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 99988899999999999999999999986
No 61
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=4.3e-74 Score=714.21 Aligned_cols=525 Identities=23% Similarity=0.311 Sum_probs=446.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 730 AVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRR 809 (1303)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 809 (1303)
+.++++++++.+.+.+..+++++.+++....... .......+.+++++++++..++.+++.++..+.+.++..++|.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 5 LALLGLLGALGALLIIAQAWLLARVIDGLISAGE---PLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566667777777888888888886632110 1123344566666777778888999999999999999999999
Q ss_pred HHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 810 MMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSL 889 (1303)
Q Consensus 810 ~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~ 889 (1303)
++|+++++.|..||++ .++|++++|+++|++.+++.+...+..++..+..+++.+++++.++|.+++++++.+|+.++
T Consensus 82 ~l~~~l~~~~~~~~~~--~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 82 RLLAAVAALGPGWLQG--RPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHhCCchhhcc--CChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999999999974 78999999999999999999998888888888888888889999999999999988888776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 890 SAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLF 969 (1303)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 (1303)
......+..+...++.++...+....+.|.++|+++||+|+.++++.++|++..++..+...+..........+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666667777777888899999999999999999999999999998888877776666655555555555555
Q ss_pred HHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 000751 970 ACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPN 1049 (1303)
Q Consensus 970 ~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 1049 (1303)
+...+++.+++..+..|.++++.++....+......++.........+.++..+++|+.++++.+++.. ... . .++.
T Consensus 240 ~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~-~~~-~-~~~~ 316 (529)
T TIGR02857 240 LSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLA-GKA-P-VTAA 316 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccC-CCc-C-CCCC
Confidence 555555566677777899999988877666666666777777777888899999999999987432211 111 1 1111
Q ss_pred CcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhh
Q 000751 1050 VYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLR 1129 (1303)
Q Consensus 1050 ~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR 1129 (1303)
..+.|+|+||+|+||+.+ +++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||.|+++++.+++|
T Consensus 317 ~~~~i~~~~v~f~y~~~~-~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr 395 (529)
T TIGR02857 317 PAPSLEFSGLSVAYPGRR-APALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWR 395 (529)
T ss_pred CCCeEEEEEEEEECCCCC-cccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHH
Confidence 236799999999998643 3699999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhc
Q 000751 1130 NHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLK 1209 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr 1209 (1303)
++++||||||++|++||||||.++.++.+|++++++++.++++++++++|+|+||.+||+|.+||||||||++||||+++
T Consensus 396 ~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~ 475 (529)
T TIGR02857 396 DQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLR 475 (529)
T ss_pred hheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999988889999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEE
Q 000751 1210 NAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVL 1264 (1303)
Q Consensus 1210 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl 1264 (1303)
+|+|||||||||+||+++|+.+++.+++..+ ++|+|+||||+++++.||+|+||
T Consensus 476 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 476 DAPLLLLDEPTAHLDAETEALVTEALRALAQ-GRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCCEEEEeCcccccCHHHHHHHHHHHHHhcC-CCEEEEEecCHHHHHhCCEEEeC
Confidence 9999999999999999999999999998754 69999999999999999999986
No 62
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.6e-74 Score=779.88 Aligned_cols=504 Identities=21% Similarity=0.259 Sum_probs=401.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 000751 37 VYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNM 116 (1303)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~ 116 (1303)
++++++..++.+++.++....+.+...++|.+++++++++|+.||+++ ++|++++|+++|++.+++.+...+..++..+
T Consensus 960 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~-~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~ 1038 (1622)
T PLN03130 960 ALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTN-PLGRIINRFAKDLGDIDRNVAVFVNMFLGQI 1038 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445556677777788888999999999999999999999999995 8999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHH
Q 000751 117 ATFFSGLAIAFVNCWQIALITLCTGPFIVAAG-GISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYS 195 (1303)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~ 195 (1303)
+.+++.++++++++|.. ++++++++++++.. .++.+..++..+......+...+.+.|+++|+++||+|++++++.+.
T Consensus 1039 ~~~i~~~i~i~~~~~~~-~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~ 1117 (1622)
T PLN03130 1039 FQLLSTFVLIGIVSTIS-LWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEI 1117 (1622)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHH
Confidence 88888888888888733 32222222222111 12222222333333445567788999999999999999999877776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-cc-----HHHHHHHHHHHHHHHHHHHHHHH
Q 000751 196 YATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNK-AH-----GGEIVTALFAVILSGLGLNQAAT 269 (1303)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~-~~-----~g~l~~~~~~~~~~~~~l~~~~~ 269 (1303)
+.+..+...+..........+......++ ..+++++.|.+.+..+. .. .+.+..++.+...+..++..+..
T Consensus 1118 ~~~~~~~~~~~~~~~~~~~~wl~~~l~~~---~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~ 1194 (1622)
T PLN03130 1118 NGRSMDNNIRFTLVNMSSNRWLAIRLETL---GGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLR 1194 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 66655554444333222222222222211 12222333334344332 11 22232333444555566677777
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCC-C-CCCCC--CCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECC
Q 000751 270 NFYSFDQGRIAAYRLYEMISRSSSTTNY-D-GNTLP--SVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGR 345 (1303)
Q Consensus 270 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~-~-~~~~~--~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~ 345 (1303)
.+..++.+..|.+|+.++++.+++.... + ..+.+ +.++.|+|+||+|+|++ +.+++|+|+||+|+|||++||||+
T Consensus 1195 ~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~-~~~~VL~~is~~I~~GekVaIVGr 1273 (1622)
T PLN03130 1195 LASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRP-ELPPVLHGLSFEISPSEKVGIVGR 1273 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCC-CCCceecceeEEEcCCCEEEEECC
Confidence 7788899999999999999876543211 1 11111 24578999999999963 234799999999999999999999
Q ss_pred CCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcc
Q 000751 346 NGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHA 425 (1303)
Q Consensus 346 sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~ 425 (1303)
||||||||+++|.|+|+|++|+|.|||+|+++++.+++|++|++|||||.||+|||||||.++++++++++++|++.|++
T Consensus 1274 SGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~~Al~~a~l 1353 (1622)
T PLN03130 1274 TGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWESLERAHL 1353 (1622)
T ss_pred CCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHHHHHHHcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 000751 426 HTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRL 505 (1303)
Q Consensus 426 ~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~ 505 (1303)
+++|.++|+|+||.|||+|.+|||||||||||||||+++|+|||||||||+||++||+.|+++|++..+++|+|+||||+
T Consensus 1354 ~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL 1433 (1622)
T PLN03130 1354 KDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRL 1433 (1622)
T ss_pred HHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCEEEEEeCceEeeccChHHHhhc-ChhHHHHHHHHH
Q 000751 506 SLIRNADYIAVMDEGRLFEMGTHDELLAT-GDLYAELLKCEE 546 (1303)
Q Consensus 506 ~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 546 (1303)
+++.+||+|+||++|+|+|.|+|+||+++ ++.|+++++...
T Consensus 1434 ~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~ 1475 (1622)
T PLN03130 1434 NTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTG 1475 (1622)
T ss_pred HHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcC
Confidence 99999999999999999999999999987 689999987643
No 63
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.2e-74 Score=778.13 Aligned_cols=500 Identities=19% Similarity=0.219 Sum_probs=416.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 44 FAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGL 123 (1303)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~ 123 (1303)
+++.++..+.....+.+...++|.++++++++.|+.||+++ ++|++++|+++|++.+++.+...+..++..++.+++.+
T Consensus 1012 ~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~-~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~l 1090 (1560)
T PTZ00243 1012 TFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTT-PLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSI 1090 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCC-CccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444555677788999999999999999999995 89999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHH
Q 000751 124 AIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQAT 203 (1303)
Q Consensus 124 ~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~ 203 (1303)
+++++.+|.+.++++..+.++..+...+.+..+...+......+.+.+.+.|+++|+++||+|++++.+.++|.+..+..
T Consensus 1091 i~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~ 1170 (1560)
T PTZ00243 1091 LVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVV 1170 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHH
Confidence 99999888544332221111222222333333334444445667788999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 204 LRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFL--VTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGRIAA 281 (1303)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~ 281 (1303)
.+..+.......+......++..+..+++++++... ...+.+++|.+..++.+...+..|+..+...+..++.++.+.
T Consensus 1171 ~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~ 1250 (1560)
T PTZ00243 1171 YSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSV 1250 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877766555555555544444444433333444333 334557889888888888888899999999999999999999
Q ss_pred HHHHHHhccCCCCCCC--------------------------CCC-----CCCCCCccEEEEEEEEEcCCCCCCCcccce
Q 000751 282 YRLYEMISRSSSTTNY--------------------------DGN-----TLPSVHGNIEFRNVYFSYLSRPEIPILSGF 330 (1303)
Q Consensus 282 ~ri~~~l~~~~~~~~~--------------------------~~~-----~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i 330 (1303)
+|+.++++..+++... ... +..+..+.|+|+||+|+|++ +..++|+||
T Consensus 1251 eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~-~~~~vL~~v 1329 (1560)
T PTZ00243 1251 ERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYRE-GLPLVLRGV 1329 (1560)
T ss_pred HHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCC-CCCceeecc
Confidence 9999998643221100 000 00113467999999999964 234699999
Q ss_pred eEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCCC
Q 000751 331 YLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRD 410 (1303)
Q Consensus 331 ~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~ 410 (1303)
||+|++||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++|+||||||+||+|||||||..+.+
T Consensus 1330 sf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~ 1409 (1560)
T PTZ00243 1330 SFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLE 1409 (1560)
T ss_pred eEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccC-CCEEEEeCCCCCCCHHHHHHHHHHH
Q 000751 411 ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLN-PSILLLDEVTGGLDFEAERAVQEAL 489 (1303)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~-~~ililDe~ts~lD~~~~~~i~~~l 489 (1303)
++++++++|++.|+++++|.++|+||||.|||+|.+|||||||||||||||+++ |+|||||||||+||++|++.|++.|
T Consensus 1410 ~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L 1489 (1560)
T PTZ00243 1410 ASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATV 1489 (1560)
T ss_pred CCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999996 8999999999999999999999999
Q ss_pred HHhcCCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhc-ChhHHHHHHHH
Q 000751 490 DLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLAT-GDLYAELLKCE 545 (1303)
Q Consensus 490 ~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~~~ 545 (1303)
++..+++|+|+||||++++..||+|+||++|+|+|.|+|+||+++ ++.|+++++.+
T Consensus 1490 ~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1490 MSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred HHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 998899999999999999999999999999999999999999985 88999998765
No 64
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=6e-74 Score=713.42 Aligned_cols=513 Identities=23% Similarity=0.282 Sum_probs=440.1
Q ss_pred CChhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchh
Q 000751 10 FPVPKFVDCLVVAFGVEVWLSELALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGD 89 (1303)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~ 89 (1303)
+....++|.++.... ...+..++..++.+.++..++.+++.++....+.++..++|.++|+|++++|+. ..++
T Consensus 27 ~~~~~iid~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~------~~~~ 99 (544)
T TIGR01842 27 LYMLQVYDRVLTSGS-VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASFSATLR------RGKI 99 (544)
T ss_pred HHHHHHHHHhccCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc------Cccc
Confidence 334455665543221 112222233333344455677788888888899999999999999999999983 2256
Q ss_pred HHHHHHhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 90 IVSQVLSDVLLIQSALSEK-VGNYIHNMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAE 168 (1303)
Q Consensus 90 l~sr~~~Dv~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (1303)
..+++++|++.+++++... +..++..++ .++.++++++++|.+++++++.+|+++++..++.++.++..++.++..++
T Consensus 100 ~~~~~~~d~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~ 178 (544)
T TIGR01842 100 DGLQALRDLDQLRQFLTGPGLFAFFDAPW-MPIYLLVCFLLHPWIGILALGGAVVLVGLALLNNRATKKPLKEATEASIR 178 (544)
T ss_pred hHHHHHHHHHHHHHHHhhhHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 7888999999999988774 444444444 44455788999999999988888888777777788888888888999999
Q ss_pred HHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHH
Q 000751 169 AASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGG 248 (1303)
Q Consensus 169 ~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g 248 (1303)
..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+.....+....+..++..+..++++++|++++.+|.+|+|
T Consensus 179 ~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~it~g 258 (544)
T TIGR01842 179 ANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLGLGAYLAIDGEITPG 258 (544)
T ss_pred HhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999999999999999999999999988888777777776666666666666677788899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCccc
Q 000751 249 EIVTALFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRSSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILS 328 (1303)
Q Consensus 249 ~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~ 328 (1303)
.+++++.++..+..|+..+...+..+++++.+.+|+.++++.+++..+. ...+...+.|+++||+|+|++ +++++|+
T Consensus 259 ~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~--~~~~~~~~~i~~~~v~~~y~~-~~~~~l~ 335 (544)
T TIGR01842 259 MMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA--MPLPEPEGHLSVENVTIVPPG-GKKPTLR 335 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC--CCCCCCCCeEEEEEEEEEcCC-CCccccc
Confidence 9999999999999999999999999999999999999999765443211 111223457999999999974 2357999
Q ss_pred ceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcC
Q 000751 329 GFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYG 408 (1303)
Q Consensus 329 ~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~ 408 (1303)
|+||++++||+++||||||||||||+++|+|+|+|++|+|.+||+++++++.+++|++|+||+|+|++|++|++|||.++
T Consensus 336 ~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~ 415 (544)
T TIGR01842 336 GISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLPQDVELFPGTVAENIARF 415 (544)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEecCCcccccccHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999977
Q ss_pred C-CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHH
Q 000751 409 R-DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQE 487 (1303)
Q Consensus 409 ~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~ 487 (1303)
+ ++++++++++++.++++++++++|+|+||.+||+|.+|||||||||+||||++++|++||||||||+||+++++.+.+
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~ 495 (544)
T TIGR01842 416 GENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALAN 495 (544)
T ss_pred CCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHH
Confidence 6 689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhc-CCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhh
Q 000751 488 ALDLLM-LGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 488 ~l~~~~-~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
.++++. +++|+|+||||++.++.||+|++|++|++++.|+|+++++
T Consensus 496 ~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 496 AIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred HHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 998875 6899999999999999999999999999999999999865
No 65
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=7.4e-73 Score=703.62 Aligned_cols=534 Identities=23% Similarity=0.327 Sum_probs=449.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 731 VLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRM 810 (1303)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 810 (1303)
...++..++...+..+.++++..+++....... ......+.++++++.++..++.+++.++..+.+.++..++|.+
T Consensus 9 ~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 84 (544)
T TIGR01842 9 IIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS----VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQP 84 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555566667777888876542211 1223345555666666777888889999999999999999999
Q ss_pred HHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 811 MFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSN-RLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSL 889 (1303)
Q Consensus 811 l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~-~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~ 889 (1303)
+|+++++.|+..+ +...+++.+|++.++..+.. .+..++..+..++ .++++++++|++++++++.+|++++
T Consensus 85 ~~~~ll~~~~~~~-------~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~ 156 (544)
T TIGR01842 85 IFAASFSATLRRG-------KIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVG 156 (544)
T ss_pred HHHHHhcCcccCc-------cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999999998432 45678899999999988876 4444444444444 4467889999999988888777766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 890 SAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLF 969 (1303)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 (1303)
......+..++..++.++...+....+.|.++|+++||+|+.++.+.++|++..++..+...+.....+....+..++..
T Consensus 157 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (544)
T TIGR01842 157 LALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRI 236 (544)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555566666777778888899999999999999999999999999999988888777777777777777777777
Q ss_pred HHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 000751 970 ACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPN 1049 (1303)
Q Consensus 970 ~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 1049 (1303)
++.++++++|++++.+|.+++|.++....+......++.........+.++..+.+|+.++++.+++.++. ...+.
T Consensus 237 ~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~----~~~~~ 312 (544)
T TIGR01842 237 VLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA----MPLPE 312 (544)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC----CCCCC
Confidence 77888889999999999999999988887777777788888888888899999999999998764432211 11122
Q ss_pred CcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhh
Q 000751 1050 VYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLR 1129 (1303)
Q Consensus 1050 ~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR 1129 (1303)
..+.|+++||+|+|++.+ .++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+.+++.+.+|
T Consensus 313 ~~~~i~~~~v~~~y~~~~-~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~ 391 (544)
T TIGR01842 313 PEGHLSVENVTIVPPGGK-KPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFG 391 (544)
T ss_pred CCCeEEEEEEEEEcCCCC-ccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHh
Confidence 346799999999997542 3699999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhc
Q 000751 1130 NHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLK 1209 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr 1209 (1303)
++++||||||++|++|++|||.++.+++++++++++++.++++++++++|+|+||.+|++|.+||||||||++||||+++
T Consensus 392 ~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~ 471 (544)
T TIGR01842 392 KHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYG 471 (544)
T ss_pred hheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999998877789999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1210 NAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1210 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
+|+|||||||||+||+++++.+.+.+++...+++|+|+||||++++..||+|++|++|+++|.|+|++|+++
T Consensus 472 ~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 543 (544)
T TIGR01842 472 DPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLAK 543 (544)
T ss_pred CCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc
Confidence 999999999999999999999999999875346999999999999999999999999999999999999764
No 66
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=8.3e-74 Score=774.52 Aligned_cols=504 Identities=19% Similarity=0.235 Sum_probs=404.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 000751 37 VYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNM 116 (1303)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~ 116 (1303)
+.++++..++.+++.++....+.+...++|.+++++++++|+.||+++ ++|++++|+++|++.+++.+...+..++..+
T Consensus 957 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~-~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~ 1035 (1495)
T PLN03232 957 ALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTN-PTGRVINRFSKDIGDIDRNVANLMNMFMNQL 1035 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcC-CchHHHHHhHhhHHHHHHHHHHHHHHHHHHH
Confidence 334445566777778888888999999999999999999999999995 8999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHH
Q 000751 117 ATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISN-IFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYS 195 (1303)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~ 195 (1303)
+.+++.+++++++++... ++++++++++.+...+. +..++..+......+...+.+.|+++|+++||+|++++.+.++
T Consensus 1036 ~~~i~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~ 1114 (1495)
T PLN03232 1036 WQLLSTFALIGTVSTISL-WAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKI 1114 (1495)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHH
Confidence 888888888877775332 22222222222222222 2222334444556677789999999999999999999887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCcc-----HHHHHHHHHHHHHHHHHHHHHHH
Q 000751 196 YATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVT-HNKAH-----GGEIVTALFAVILSGLGLNQAAT 269 (1303)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~-~g~~~-----~g~l~~~~~~~~~~~~~l~~~~~ 269 (1303)
+.+..+...+..........+...... .+..+++++.|.+.+. .+.+. .+.+..++.+...+..|+..+..
T Consensus 1115 ~~~~~~~~~~~~~~~~~~~~wl~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~ 1191 (1495)
T PLN03232 1115 NGKSMDNNIRFTLANTSSNRWLTIRLE---TLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLR 1191 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 766655555444332222222211111 1122222333334443 23321 12222344555666778888899
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCC-CC-CCCC--CCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECC
Q 000751 270 NFYSFDQGRIAAYRLYEMISRSSSTTNY-DG-NTLP--SVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGR 345 (1303)
Q Consensus 270 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~-~~-~~~~--~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~ 345 (1303)
.+..++.+..|.+|+.++++.+++.... .. .+.+ +..+.|+|+||+|+|++ +.+++|+|+||+|++||++||||+
T Consensus 1192 ~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~-~~~~vL~~isl~I~~GekvaIVG~ 1270 (1495)
T PLN03232 1192 QASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRP-GLPPVLHGLSFFVSPSEKVGVVGR 1270 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECC-CCCcccccceEEEcCCCEEEEECC
Confidence 9999999999999999999876543221 11 1111 24568999999999953 235799999999999999999999
Q ss_pred CCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcc
Q 000751 346 NGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHA 425 (1303)
Q Consensus 346 sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~ 425 (1303)
||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||||+||+|||||||.++++++++++++|++.|++
T Consensus 1271 SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei~~al~~a~l 1350 (1495)
T PLN03232 1271 TGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHI 1350 (1495)
T ss_pred CCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999989999999999999999
Q ss_pred hHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 000751 426 HTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRL 505 (1303)
Q Consensus 426 ~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~ 505 (1303)
+++++++|+|+||.+||+|.+|||||||||||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||+
T Consensus 1351 ~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl 1430 (1495)
T PLN03232 1351 KDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRL 1430 (1495)
T ss_pred HHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998999999999999
Q ss_pred ccccccCEEEEEeCceEeeccChHHHhhcC-hhHHHHHHHHH
Q 000751 506 SLIRNADYIAVMDEGRLFEMGTHDELLATG-DLYAELLKCEE 546 (1303)
Q Consensus 506 ~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~~~~~~~~~~ 546 (1303)
+++..||+|+||++|+|+|.|+|+||++++ +.|+++++.+.
T Consensus 1431 ~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~ 1472 (1495)
T PLN03232 1431 NTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTG 1472 (1495)
T ss_pred HHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 999999999999999999999999999986 58999987653
No 67
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=5.9e-74 Score=668.51 Aligned_cols=478 Identities=27% Similarity=0.430 Sum_probs=370.0
Q ss_pred cEEEEEEEEEcCCCCC-CCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCC----CcEEEECCeecCCCCHHH
Q 000751 308 NIEFRNVYFSYLSRPE-IPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPT----LGEVLLDGENIKNLKLEW 382 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~-~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~----~G~i~~~g~~~~~~~~~~ 382 (1303)
-++++|++..|...++ ..+++||||++.+||++||||+|||||||+++.|+|+.++. +|+|.++|.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 4899999999975432 25999999999999999999999999999999999999988 899999999999998876
Q ss_pred Hh----cceEEEecccc-ccc--HhHHHHHh----cCCCC----CHHHHHHHHHHhcchHHHHhcccccCccccCCCCCC
Q 000751 383 LR----SQIGLVTQEPA-LLS--LSIRDNIA----YGRDA----TLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLAL 447 (1303)
Q Consensus 383 ~~----~~i~~v~Q~~~-l~~--~ti~~ni~----~~~~~----~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~L 447 (1303)
+| +.|+||+|+|+ .+| .||.+-|. ..... ..++..+.++.+++.+-... ..-...|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCccc
Confidence 54 47999999995 454 35554443 32222 22344555556655443322 3345689
Q ss_pred ChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccc-cCEEEEEeCceEee
Q 000751 448 TEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRN-ADYIAVMDEGRLFE 524 (1303)
Q Consensus 448 SgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~ 524 (1303)
|||||||+.||+||..+|++||+||||++||+.++.+|.+.|+++. .|.++|+|||++..+.. ||||+||.+|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999886 68999999999999875 99999999999999
Q ss_pred ccChHHHhhcCh-hH-HHHHHHHHhccCCCCCCccCcccccccccccCccCCCCCCCCCCcccCCCCccccccccCCCCC
Q 000751 525 MGTHDELLATGD-LY-AELLKCEEAAKLPRRMPVRNYKETSTFQIEKDSSASHSFQEPSSPKMLKSPSLQRVGIYRPTDG 602 (1303)
Q Consensus 525 ~g~~~~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (1303)
.|+.++++.+.. .| +.++.
T Consensus 236 ~G~~~~i~~~p~hpYT~~Ll~----------------------------------------------------------- 256 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGLLA----------------------------------------------------------- 256 (539)
T ss_pred ecCHHHHHhccCCcccHHHHh-----------------------------------------------------------
Confidence 999999875310 00 00000
Q ss_pred CCCCCCCCCCCCCchhhhhhcCCCCCccCCCccccccccccccCCCCCccccccccccCCCCCCCCCCCCCCCCCCCccc
Q 000751 603 AFDSQESPKVLSPPSEKMLENGMPMDAADKEPSIRRQDSFEMRLPELPKIDVHSSNRQTSNGSDPESPISPLLTSDPKNE 682 (1303)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1303)
T Consensus 257 -------------------------------------------------------------------------------- 256 (539)
T COG1123 257 -------------------------------------------------------------------------------- 256 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccCCCCCCCCCCcchhhhhhhccCcchHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 000751 683 RSHSQTFSRPHSHSDDFPTKVREEESKHQKAPSFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPE 762 (1303)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (1303)
. .
T Consensus 257 --------------------------------------------------------------------------a-~--- 258 (539)
T COG1123 257 --------------------------------------------------------------------------A-V--- 258 (539)
T ss_pred --------------------------------------------------------------------------h-C---
Confidence 0 0
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHH
Q 000751 763 ERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDAT 842 (1303)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~ 842 (1303)
|. .+.....
T Consensus 259 --------------------------------------------------------p~--~~~~~~~------------- 267 (539)
T COG1123 259 --------------------------------------------------------PR--LGDEKII------------- 267 (539)
T ss_pred --------------------------------------------------------CC--ccccccc-------------
Confidence 00 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000751 843 FVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRN 922 (1303)
Q Consensus 843 ~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g 922 (1303)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHH
Q 000751 923 IYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSF 1002 (1303)
Q Consensus 923 i~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~ 1002 (1303)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccEEEEeeEEECCCC--------CCcceeee
Q 000751 1003 ATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSR--------PEVLVLSN 1074 (1303)
Q Consensus 1003 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~--------~~~~vL~~ 1074 (1303)
. .+...+.. ...-++++|++.+|..+ ....+++|
T Consensus 268 -----------------------------~-~~~~~~~~--------~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~ 309 (539)
T COG1123 268 -----------------------------R-LPRRGPLR--------AEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDD 309 (539)
T ss_pred -----------------------------c-cccccccc--------cCceeEeeeeeeeeccccccccccccceeeeee
Confidence 0 00000000 01137889999999741 23468999
Q ss_pred eeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCee--CCCCCHHHhhcceEEEccCCccC---cccHHHH
Q 000751 1075 FSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRD--LKLYNLRWLRNHLGLVQQEPIIF---STTIREN 1149 (1303)
Q Consensus 1075 isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~d--i~~~~~~~lR~~i~~VpQdp~LF---~gTIreN 1149 (1303)
|||++++||++||||+||||||||.++|+|+++|++|+|.++|.| .+.-+...+|+++-+|+|||+-. ..||+++
T Consensus 310 VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~ 389 (539)
T COG1123 310 VSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDI 389 (539)
T ss_pred eeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHH
Confidence 999999999999999999999999999999999999999999977 33333567888999999999632 3699999
Q ss_pred HHcCCC---CC----CHHHHHHHHHHhchHH-HHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 000751 1150 IIYARH---NA----SEAEVKEAARIANAHH-FISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASS 1221 (1303)
Q Consensus 1150 l~~g~~---~~----~~~ei~~al~~a~l~~-~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTS 1221 (1303)
|.-... .. ..+.+.+.++.+++.+ +..+- ...||||||||+||||||..+|++|++|||||
T Consensus 390 i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ry-----------P~elSGGQrQRvaIARALa~~P~lli~DEp~S 458 (539)
T COG1123 390 LAEPLRIHGGGSGAERRARVAELLELVGLPPEFLDRY-----------PHELSGGQRQRVAIARALALEPKLLILDEPVS 458 (539)
T ss_pred HHhHHhhhcccchHHHHHHHHHHHHHcCCCHHHHhcC-----------chhcCcchhHHHHHHHHHhcCCCEEEecCCcc
Confidence 963211 11 1233566677777654 33333 44899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHHHhhc-CchhHHHHhh
Q 000751 1222 SIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDSLLAK-NGLYVRLMQP 1291 (1303)
Q Consensus 1222 aLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~eLl~~-~g~y~~l~~~ 1291 (1303)
+||+-+.+.|.+.|.++..+ |.|.|+|||+++.++. ||||+||++|+|||.|+.+++.+. +..|.+...+
T Consensus 459 aLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~~ 531 (539)
T COG1123 459 ALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLLA 531 (539)
T ss_pred ccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHHHH
Confidence 99999999999999876443 6899999999999876 999999999999999999999887 5677776543
No 68
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.1e-70 Score=742.53 Aligned_cols=497 Identities=17% Similarity=0.207 Sum_probs=409.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 43 VFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSG 122 (1303)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~ 122 (1303)
..++.+++.+++...+.+...++|.++++++++.|+.||++. ++|++++|+++|++.+++.+...+..++..++.+++.
T Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~-~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~ 1016 (1490)
T TIGR01271 938 VLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTM-KAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGA 1016 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556677777788999999999999999999999999995 8999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHH
Q 000751 123 LAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQA 202 (1303)
Q Consensus 123 ~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~ 202 (1303)
++++++++|.++++++..+.+++++..++.+..+...+......+.+.+.+.|+++|+.+||+|++++.+.+++.+..+.
T Consensus 1017 l~~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~ 1096 (1490)
T TIGR01271 1017 IFVVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNL 1096 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHH
Confidence 99999999987654333222222222233333333344445556778899999999999999999999999999988876
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 203 TLRYGILISLVQGLGLGFTYGLAICSC--ALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGRIA 280 (1303)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a 280 (1303)
..+..........+......++..+.. +++++++. ...+.|.+..++.+.+.+..++..+...+..+.....|
T Consensus 1097 ~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~-----~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s 1171 (1490)
T TIGR01271 1097 HTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGT-----NQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRS 1171 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555444333333333222222221111 11122222 23445555556666667777888888888899999999
Q ss_pred HHHHHHHhccCCCCCCCCC---------------CCCC---CCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEE
Q 000751 281 AYRLYEMISRSSSTTNYDG---------------NTLP---SVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVAL 342 (1303)
Q Consensus 281 ~~ri~~~l~~~~~~~~~~~---------------~~~~---~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~i 342 (1303)
.+||.++++.+++...... ...+ +..+.|+|+||+|+|++ +.+++|+||||+|++||++||
T Consensus 1172 ~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~-~~~~vL~~is~~I~~GekvaI 1250 (1490)
T TIGR01271 1172 VSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTE-AGRAVLQDLSFSVEGGQRVGL 1250 (1490)
T ss_pred HHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCC-CCcceeeccEEEEcCCCEEEE
Confidence 9999999976654321100 0001 23468999999999974 346899999999999999999
Q ss_pred ECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHH
Q 000751 343 VGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKI 422 (1303)
Q Consensus 343 vG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~ 422 (1303)
||+||||||||+++|+|+|+ ++|+|+|||+|+++++.+++|++|+||||+|+||+|||||||....+++++++++|++.
T Consensus 1251 vGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~ 1329 (1490)
T TIGR01271 1251 LGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEE 1329 (1490)
T ss_pred ECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHH
Confidence 99999999999999999997 79999999999999999999999999999999999999999998778899999999999
Q ss_pred hcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEe
Q 000751 423 AHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIA 502 (1303)
Q Consensus 423 ~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~it 502 (1303)
|++++++.++|+|+||.|||+|.+|||||||||||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||
T Consensus 1330 ~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~Ia 1409 (1490)
T TIGR01271 1330 VGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSE 1409 (1490)
T ss_pred CCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998999999999
Q ss_pred cCCccccccCEEEEEeCceEeeccChHHHhhcChhHHHHHHHHHh
Q 000751 503 RRLSLIRNADYIAVMDEGRLFEMGTHDELLATGDLYAELLKCEEA 547 (1303)
Q Consensus 503 h~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 547 (1303)
||++++..+|+|+||++|+|+|.|+|++|+++++.|+++++.+..
T Consensus 1410 HRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1410 HRVEALLECQQFLVIEGSSVKQYDSIQKLLNETSLFKQAMSAADR 1454 (1490)
T ss_pred cCHHHHHhCCEEEEEECCEEEEeCCHHHHHcCCcHHHHHHHHhCh
Confidence 999999999999999999999999999999988999999886544
No 69
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-71 Score=695.66 Aligned_cols=227 Identities=25% Similarity=0.387 Sum_probs=186.9
Q ss_pred cEEEEeeEEECCCCC--------CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCC
Q 000751 1053 SIELKNVDFCYPSRP--------EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYN 1124 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~--------~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~ 1124 (1303)
-|+++||+++|+.+. ...+|+||||+|++||++||+|+||||||||+++|.|+.+|++|+|.++|.++...+
T Consensus 313 ~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~ 392 (623)
T PRK10261 313 ILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLS 392 (623)
T ss_pred eEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCC
Confidence 489999999996311 135999999999999999999999999999999999999999999999999998776
Q ss_pred HH---HhhcceEEEccCCc--cCc-ccHHHHHHcCC--CCC-C----HHHHHHHHHHhchH-HHHHhCCCCcccccCCCC
Q 000751 1125 LR---WLRNHLGLVQQEPI--IFS-TTIRENIIYAR--HNA-S----EAEVKEAARIANAH-HFISSLPHGYDTHVGMRG 1190 (1303)
Q Consensus 1125 ~~---~lR~~i~~VpQdp~--LF~-gTIreNl~~g~--~~~-~----~~ei~~al~~a~l~-~~I~~lp~Gldt~vge~G 1190 (1303)
.. .+|++|+||||+|. +++ .||.+|+.++. ... + .+++.++++.+++. +...+. .
T Consensus 393 ~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----------~ 461 (623)
T PRK10261 393 PGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRY-----------P 461 (623)
T ss_pred HHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCC-----------c
Confidence 43 46788999999983 665 59999997531 111 1 13455666666663 333322 3
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhh-cCEEEEEeCCE
Q 000751 1191 VDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRH-VDNIVVLNGGR 1268 (1303)
Q Consensus 1191 ~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~-~D~Iivl~~G~ 1268 (1303)
.+||||||||++|||||+.+|+|||||||||+||+.+...+.+.|+++.++ +.|+|+|||+++.+.. ||+|++|++|+
T Consensus 462 ~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~ 541 (623)
T PRK10261 462 HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQ 541 (623)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 479999999999999999999999999999999999999999999887543 6899999999998764 99999999999
Q ss_pred EEEecChHHHhhc-CchhHH-HHh
Q 000751 1269 IVEEGTHDSLLAK-NGLYVR-LMQ 1290 (1303)
Q Consensus 1269 Ive~Gt~~eLl~~-~g~y~~-l~~ 1290 (1303)
|++.|+++++... ...|.+ ++.
T Consensus 542 iv~~g~~~~i~~~p~~~~~~~l~~ 565 (623)
T PRK10261 542 IVEIGPRRAVFENPQHPYTRKLMA 565 (623)
T ss_pred EEEecCHHHHhcCCCCHHHHHHHh
Confidence 9999999999865 334544 443
No 70
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=5e-70 Score=677.77 Aligned_cols=475 Identities=19% Similarity=0.155 Sum_probs=406.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000751 39 IAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMAT 118 (1303)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~ 118 (1303)
+.++.+++.++..++.+..+.++..++|.++|+|++++|+.+|+++ ++|++++|+++|++.+++++.. ++.++..+++
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~-~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~ 139 (555)
T TIGR01194 62 LCLLALLFRIGADIFPAYAGMHIIANLRIALCEKILGAPIEEIDRR-GAHNLIPLLTHDIDQINAFLFI-FPPIAIALAI 139 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHhc-CcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHH
Confidence 3445567778888888999999999999999999999999999985 8899999999999999998864 7788888888
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhH--HHHHHH
Q 000751 119 FFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNET--LAKYSY 196 (1303)
Q Consensus 119 ~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~--~~~~~~ 196 (1303)
+++.++++++++|.+++++++.+|+.+++..++.++.++...+.++..+++++.+.|.+.|++++|+|+.++ .+.++|
T Consensus 140 ~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~ 219 (555)
T TIGR01194 140 FFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAI 219 (555)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHh
Confidence 899999999999999999988888888777777777788888888999999999999999999999999954 557788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 197 ATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQ 276 (1303)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 276 (1303)
.+..++..+...+.........++..++..+..++.+++|++. |.+++|.+++++.+...+..|+..+...+..+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~ 296 (555)
T TIGR01194 220 QESANNIADLHIIEILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQ 296 (555)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877776665554444433444444444444445555543 7899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCC--CC-C-CCCC-----CCCCCCccEEEEEEEEEcCCCC--CCCcccceeEEeeCCCEEEEECC
Q 000751 277 GRIAAYRLYEMISRSSS--TT-N-YDGN-----TLPSVHGNIEFRNVYFSYLSRP--EIPILSGFYLTVPAKKAVALVGR 345 (1303)
Q Consensus 277 ~~~a~~ri~~~l~~~~~--~~-~-~~~~-----~~~~~~~~i~~~~v~f~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~ 345 (1303)
++++++|+.++++.+.+ .. + .+.. ......+.|+++||+|+|++.+ ++++|+|+||++++||++|||||
T Consensus 297 a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~ 376 (555)
T TIGR01194 297 AQIACQRLADFGERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGE 376 (555)
T ss_pred HHHHHHHHHHHHhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECC
Confidence 99999999999753211 11 0 1000 0111235799999999997431 23699999999999999999999
Q ss_pred CCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcc
Q 000751 346 NGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHA 425 (1303)
Q Consensus 346 sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~ 425 (1303)
||||||||+++|+|+|+|++|+|.+||.|+++++.+++|++|+||+||+++|++|+++|+ ..++++++++++++.+++
T Consensus 377 sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l 454 (555)
T TIGR01194 377 NGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEI 454 (555)
T ss_pred CCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999999999999999999999995 346788999999999999
Q ss_pred hHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHH-Hh-cCCCeEEEEec
Q 000751 426 HTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALD-LL-MLGRSTIIIAR 503 (1303)
Q Consensus 426 ~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~-~~-~~~~t~i~ith 503 (1303)
++++..+|+||||. .+|||||||||+||||++++|+|||||||||+||+++++.+.+.+. .. .+++|+|+|||
T Consensus 455 ~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH 529 (555)
T TIGR01194 455 ADKVKIEDGGFSTT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISH 529 (555)
T ss_pred chhhcccccccCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 99999999999995 7899999999999999999999999999999999999999988764 33 46899999999
Q ss_pred CCccccccCEEEEEeCceEeec
Q 000751 504 RLSLIRNADYIAVMDEGRLFEM 525 (1303)
Q Consensus 504 ~~~~~~~~d~i~~l~~G~i~~~ 525 (1303)
|+++++.||+|++|++|++++.
T Consensus 530 ~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 530 DDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred cHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999864
No 71
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-72 Score=687.60 Aligned_cols=462 Identities=21% Similarity=0.346 Sum_probs=353.3
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC--CCcEEEECCeecCCCCHHH-Hh
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP--TLGEVLLDGENIKNLKLEW-LR 384 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~--~~G~i~~~g~~~~~~~~~~-~~ 384 (1303)
-|+++|++++|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+... .|
T Consensus 5 ~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFG---GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeC---CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 489999999994 35799999999999999999999999999999999999996 8999999999998776543 46
Q ss_pred cceEEEeccccccc-HhHHHHHhcCCC------CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHH
Q 000751 385 SQIGLVTQEPALLS-LSIRDNIAYGRD------ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSI 457 (1303)
Q Consensus 385 ~~i~~v~Q~~~l~~-~ti~~ni~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrial 457 (1303)
+.|+||+|++.+|. .|++||+.++.. .+.++..+. +.+.++.+ |++........+||||||||++|
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~l 154 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLR-----AQKLLAQL--KLDINPATPVGNLGLGQQQLVEI 154 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHH-----HHHHHHHc--CCCCCcccchhhCCHHHHHHHHH
Confidence 78999999998875 699999998742 122222111 12233333 34334445567899999999999
Q ss_pred HHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhcC
Q 000751 458 ARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLATG 535 (1303)
Q Consensus 458 ARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 535 (1303)
||||+.+|+|||||||||+||+.+...+.+.|.++. +++|+|+|||+++.+. .||+|++|++|++++.|+.+++...
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~- 233 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTED- 233 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCHH-
Confidence 999999999999999999999999999999998874 5789999999999886 4999999999999876542111000
Q ss_pred hhHHHHHHHHHhccCCCCCCccCcccccccccccCccCCCCCCCCCCcccCCCCccccccccCCCCCCCCCCCCCCCCCC
Q 000751 536 DLYAELLKCEEAAKLPRRMPVRNYKETSTFQIEKDSSASHSFQEPSSPKMLKSPSLQRVGIYRPTDGAFDSQESPKVLSP 615 (1303)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (1303)
T Consensus 234 -------------------------------------------------------------------------------- 233 (506)
T PRK13549 234 -------------------------------------------------------------------------------- 233 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhhhcCCCCCccCCCccccccccccccCCCCCccccccccccCCCCCCCCCCCCCCCCCCCcccccccccccCCCCC
Q 000751 616 PSEKMLENGMPMDAADKEPSIRRQDSFEMRLPELPKIDVHSSNRQTSNGSDPESPISPLLTSDPKNERSHSQTFSRPHSH 695 (1303)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (1303)
T Consensus 234 -------------------------------------------------------------------------------- 233 (506)
T PRK13549 234 -------------------------------------------------------------------------------- 233 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcchhhhhhhccCcchHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHH
Q 000751 696 SDDFPTKVREEESKHQKAPSFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWC 775 (1303)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 775 (1303)
.. +..+
T Consensus 234 ----------------------~~-----------------------------------~~~~----------------- 239 (506)
T PRK13549 234 ----------------------DI-----------------------------------ITMM----------------- 239 (506)
T ss_pred ----------------------HH-----------------------------------HHHh-----------------
Confidence 00 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHH
Q 000751 776 LIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIF 855 (1303)
Q Consensus 776 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~ 855 (1303)
+.. +.
T Consensus 240 -----------------------------------------------~~~---~~------------------------- 244 (506)
T PRK13549 240 -----------------------------------------------VGR---EL------------------------- 244 (506)
T ss_pred -----------------------------------------------hCc---Cc-------------------------
Confidence 000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHH
Q 000751 856 IQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKV 935 (1303)
Q Consensus 856 i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~ 935 (1303)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHH
Q 000751 936 MELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAP 1015 (1303)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1303)
.
T Consensus 245 -----------------------------------------------------~-------------------------- 245 (506)
T PRK13549 245 -----------------------------------------------------T-------------------------- 245 (506)
T ss_pred -----------------------------------------------------c--------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCCh
Q 000751 1016 YILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGK 1095 (1303)
Q Consensus 1016 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGK 1095 (1303)
...+..... + ....|+++||+++|+.....++|+|+||+|++||++||+|+|||||
T Consensus 246 ----------------~~~~~~~~~------~--~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGK 301 (506)
T PRK13549 246 ----------------ALYPREPHT------I--GEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGR 301 (506)
T ss_pred ----------------ccccccccC------C--CCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCH
Confidence 000000000 0 0114899999999953212359999999999999999999999999
Q ss_pred HHHHHHHhcccc-CCccEEEECCeeCCCCCH-HHhhcceEEEccCC---ccCc-ccHHHHHHcCCC-C------CCHHHH
Q 000751 1096 STIISLIERFYD-PVAGQVLLDGRDLKLYNL-RWLRNHLGLVQQEP---IIFS-TTIRENIIYARH-N------ASEAEV 1162 (1303)
Q Consensus 1096 STL~~lL~rl~~-~~~G~I~idG~di~~~~~-~~lR~~i~~VpQdp---~LF~-gTIreNl~~g~~-~------~~~~ei 1162 (1303)
|||+++|.|+++ |++|+|.++|.++...+. +.+|++++||||+| .+|+ .|+.||+.++.. . .+.++.
T Consensus 302 STLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~ 381 (506)
T PRK13549 302 TELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAE 381 (506)
T ss_pred HHHHHHHhCCCCCCCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHH
Confidence 999999999999 599999999999875543 45677899999996 3564 699999986421 0 111111
Q ss_pred HHHHHHhchHHHHHhCCCCccc-ccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC
Q 000751 1163 KEAARIANAHHFISSLPHGYDT-HVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG 1241 (1303)
Q Consensus 1163 ~~al~~a~l~~~I~~lp~Gldt-~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~ 1241 (1303)
. ..+.+.++.+ |++. ........||||||||++||||++.+|+||||||||++||+.+.+.+.+.|+++.+.
T Consensus 382 ~-----~~~~~~l~~~--~l~~~~~~~~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~ 454 (506)
T PRK13549 382 L-----KTILESIQRL--KVKTASPELAIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQ 454 (506)
T ss_pred H-----HHHHHHHHhc--CccCCCcccccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHC
Confidence 1 1123334433 2321 123334589999999999999999999999999999999999999999999987655
Q ss_pred CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHh
Q 000751 1242 NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLL 1279 (1303)
Q Consensus 1242 ~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl 1279 (1303)
++|||+|||+++.+. .||++++|++|+++..|+++++.
T Consensus 455 g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 455 GVAIIVISSELPEVLGLSDRVLVMHEGKLKGDLINHNLT 493 (506)
T ss_pred CCEEEEECCCHHHHHHhCCEEEEEECCEEEEEeccccCC
Confidence 799999999999875 59999999999999999988764
No 72
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.8e-70 Score=615.42 Aligned_cols=512 Identities=23% Similarity=0.299 Sum_probs=446.9
Q ss_pred hHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHH
Q 000751 14 KFVDCLVVAFGVEVWLSELALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQ 93 (1303)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr 93 (1303)
.+-|++....+....+. +.++.+++.++..++.+++.....+++.++-..+...+|...++.+.... ..|+=..
T Consensus 48 QVyDRVL~S~s~~TLv~-Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~~----~~g~~~Q- 121 (580)
T COG4618 48 QVYDRVLPSRSVPTLVM-LTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLRR----GSGDGLQ- 121 (580)
T ss_pred HHHhhhccCCCcchHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhhc----CCCcccc-
Confidence 44455554433322222 22233333444556778888888899999999999999999987777643 2243333
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 94 VLSDVLLIQSALSEKVGNYIHNMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIA 173 (1303)
Q Consensus 94 ~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (1303)
..+|.++++.|++..-+..+.+.-.+.+.++++|.+.++++++.++...+++.+.++-.+..++-.++..+...+.+...
T Consensus 122 ~LrDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~ 201 (580)
T COG4618 122 PLRDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLA 201 (580)
T ss_pred chhhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 35899999999998766666666566777888999999999998888878777777777778888888888888999999
Q ss_pred HHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHH
Q 000751 174 EQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTA 253 (1303)
Q Consensus 174 ~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~ 253 (1303)
+-...+.++|++.|......++|.+.+..+...+.+.+-..+.+..+.-.+-+.....++.+|+|++++|++|+|.+++.
T Consensus 202 ~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~ 281 (580)
T COG4618 202 DATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAG 281 (580)
T ss_pred HHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHH
Confidence 99999999999999999999999999999998888888777777777777777778888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEE
Q 000751 254 LFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRSSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLT 333 (1303)
Q Consensus 254 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~ 333 (1303)
...+.....|+...+..|.++..++.|.+|+.+++...+...+ ..+.|..++.+.++++++.-|+ .++++|+||||+
T Consensus 282 SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~--~m~LP~P~g~L~Ve~l~~~PPg-~~~pil~~isF~ 358 (580)
T COG4618 282 SILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAE--RMPLPAPQGALSVERLTAAPPG-QKKPILKGISFA 358 (580)
T ss_pred HHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC--CCCCCCCCceeeEeeeeecCCC-CCCcceecceeE
Confidence 8888888999999999999999999999999999987665432 2345666789999999998765 467999999999
Q ss_pred eeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHh-cCCCCC
Q 000751 334 VPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIA-YGRDAT 412 (1303)
Q Consensus 334 i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~-~~~~~~ 412 (1303)
+++|+.++||||||||||||.++|.|.++|.+|.|++||-|+++++.+.+-++|||.||+..||+|||+|||+ |+++.+
T Consensus 359 l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d 438 (580)
T COG4618 359 LQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEAD 438 (580)
T ss_pred ecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 777999
Q ss_pred HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh
Q 000751 413 LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLL 492 (1303)
Q Consensus 413 ~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~ 492 (1303)
++.+.+|++.++.||.|.+||+||||.||+.|..|||||||||+||||+|.||.+++||||-|+||.+-|+.+.++|...
T Consensus 439 ~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~ 518 (580)
T COG4618 439 PEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAA 518 (580)
T ss_pred HHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred c-CCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhc
Q 000751 493 M-LGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 493 ~-~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
+ +|.|+|+||||++.+..+|+|.+|++|++...|+.+|.+++
T Consensus 519 k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 519 KARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred HHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 5 69999999999999999999999999999999999998764
No 73
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=8.5e-70 Score=610.06 Aligned_cols=528 Identities=22% Similarity=0.279 Sum_probs=461.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 000751 739 IFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRN 818 (1303)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~ 818 (1303)
+...+....+.++-++.|....+. ..+.+.....+.+++.++..++.+++...+.+++.++..+++..+|...++.
T Consensus 34 ~INiL~L~~~lyMLQVyDRVL~S~----s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~ 109 (580)
T COG4618 34 VINLLALTGPLYMLQVYDRVLPSR----SVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSA 109 (580)
T ss_pred HHHHHHHhhhHHHHHHHhhhccCC----CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhh
Confidence 333333344444555556555433 1233444555666667778888999999999999999999999999999876
Q ss_pred CccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 819 EVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWL 898 (1303)
Q Consensus 819 ~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~ 898 (1303)
+..-- ..|+= ...-+|.+.++.+++..-...+.+....-+.++++|.+++++++++++...+++.+.++.....
T Consensus 110 ~l~~~-----~~g~~-~Q~LrDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t 183 (580)
T COG4618 110 PLLRR-----GSGDG-LQPLRDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERAT 183 (580)
T ss_pred HHhhc-----CCCcc-ccchhhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 65421 22211 1234799999999998877888888888888999999999999999999988888888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 899 AGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWY 978 (1303)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 (1303)
++-.++..+....++..+..+.+|.++|+++|+.....++|.+....+.......+-..+...+++..+-++....++..
T Consensus 184 ~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~ 263 (580)
T COG4618 184 RKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGL 263 (580)
T ss_pred hccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77777777778888889999999999999999999999999998888888777777777888888999999999999999
Q ss_pred HhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccEEEEe
Q 000751 979 TGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKN 1058 (1303)
Q Consensus 979 ~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~ 1058 (1303)
|++++..|++|.|.+++..+...-+..++-..+..+..+..++.++.|+.+++...|...+ ..+.|.+.|.+.+++
T Consensus 264 GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~----~m~LP~P~g~L~Ve~ 339 (580)
T COG4618 264 GAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAE----RMPLPAPQGALSVER 339 (580)
T ss_pred ceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC----CCCCCCCCceeeEee
Confidence 9999999999999999888888888888888889999999999999999999987654332 244556789999999
Q ss_pred eEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceEEEccC
Q 000751 1059 VDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQE 1138 (1303)
Q Consensus 1059 Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~VpQd 1138 (1303)
+++.-|+.+ +|+|+|+||+++|||-+||+||||||||||.++|.|.++|.+|.|++||.|+++++.+++-++|||.|||
T Consensus 340 l~~~PPg~~-~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQd 418 (580)
T COG4618 340 LTAAPPGQK-KPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQD 418 (580)
T ss_pred eeecCCCCC-CcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCccc
Confidence 999877654 5899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeC
Q 000751 1139 PIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDE 1218 (1303)
Q Consensus 1139 p~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDE 1218 (1303)
..||+|||+|||+-+.++.+++.|.+|++.++.||.|.++|+||||.||++|..|||||||||+|||||+.+|++++|||
T Consensus 419 VeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDE 498 (580)
T COG4618 419 VELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDE 498 (580)
T ss_pred ceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecC
Confidence 99999999999987777889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1219 ASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1219 aTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
|-|+||.+-|+.+.++|.+.+++|+|+|+||||.+.+..+|+|+||++|++..+|+-+|.+++
T Consensus 499 PNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 499 PNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred CCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 999999999999999999988889999999999999999999999999999999999999876
No 74
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=8.6e-69 Score=666.68 Aligned_cols=534 Identities=17% Similarity=0.152 Sum_probs=423.5
Q ss_pred HHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 716 FWRLAELSF-AEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHF 794 (1303)
Q Consensus 716 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 794 (1303)
+++++.+.+ +.++.++++++...+.+......+++++.+++..... ... ....++++.++..++.++..+
T Consensus 5 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~------~~~---~~~~~~~~~~~~~~~~~~~~~ 75 (555)
T TIGR01194 5 IGEILALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFL------GQG---SLFSFGGLCLLALLFRIGADI 75 (555)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc------cch---HHHHHHHHHHHHHHHHHHHHH
Confidence 455666666 6666666666666666666666666666555421100 000 112233445556677888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 795 YFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEW 874 (1303)
Q Consensus 795 ~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~ 874 (1303)
+....+.++..++|.++|++++++|+.||++ .++|++++|+++|++.++..+.. +..++..++.++++++++++++|
T Consensus 76 ~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~ 152 (555)
T TIGR01194 76 FPAYAGMHIIANLRIALCEKILGAPIEEIDR--RGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSV 152 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHh--cCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH
Confidence 8999999999999999999999999999985 68999999999999999998864 66777778888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH--HHHHHHHHHHHHHHHHHHH
Q 000751 875 RLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGN--KVMELYRLQLKKIFTKSFL 952 (1303)
Q Consensus 875 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~--~~~~~~~~~~~~~~~~~~~ 952 (1303)
.+++++++.+|+.++.........++..++.++...+.+..+.|.+.|++++|+|+.++ ...+++.+..++..+....
T Consensus 153 ~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (555)
T TIGR01194 153 PMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHII 232 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999988888877666555555555566667777888899999999999999999843 5567777777776666555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHh
Q 000751 953 HGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIID 1032 (1303)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 1032 (1303)
..........+..++..+..++.+++++.. +.+++++++....+......++.........+.++..+++|+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~ 309 (555)
T TIGR01194 233 EILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGE 309 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444443333444444444444445555443 67899988877777777777888888888889999999999999875
Q ss_pred cCCC--CCCCCC--CCC---CCCCCcccEEEEeeEEECCCCC--CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHh
Q 000751 1033 RVPK--IDPDDS--SAV---KPPNVYGSIELKNVDFCYPSRP--EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIE 1103 (1303)
Q Consensus 1033 ~~~~--~~~~~~--~~~---~~~~~~g~I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~ 1103 (1303)
.... ..++.+ ... ++....+.|+|+||+|+|++.+ ..++|+|+||+|++||++|||||||||||||+++|.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~ 389 (555)
T TIGR01194 310 RFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFC 389 (555)
T ss_pred hhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHh
Confidence 3211 110001 000 1112346899999999997532 236999999999999999999999999999999999
Q ss_pred ccccCCccEEEECCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcc
Q 000751 1104 RFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYD 1183 (1303)
Q Consensus 1104 rl~~~~~G~I~idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gld 1183 (1303)
|+|+|++|+|.+||.|+++++.+++|++++||+|||++|++|+++|+ .++.++++++++++.++++++++.+|+|+|
T Consensus 390 g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~ 466 (555)
T TIGR01194 390 GLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGGFS 466 (555)
T ss_pred CCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhcccccccC
Confidence 99999999999999999999999999999999999999999999995 356789999999999999999999999999
Q ss_pred cccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHH-HhhcCCcEEEEEecCchhHhhcCEEE
Q 000751 1184 THVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALD-TLIMGNKTTILIAHRAAMMRHVDNIV 1262 (1303)
Q Consensus 1184 t~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~-~~~~~~~TvI~IaHrl~ti~~~D~Ii 1262 (1303)
|. .+|||||||||+||||++++|+|||||||||+||+++|+.+++.+. ....+++|+|+||||++++..||+|+
T Consensus 467 t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~ 541 (555)
T TIGR01194 467 TT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQII 541 (555)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEE
Confidence 95 6899999999999999999999999999999999999999998764 33334699999999999999999999
Q ss_pred EEeCCEEEEe
Q 000751 1263 VLNGGRIVEE 1272 (1303)
Q Consensus 1263 vl~~G~Ive~ 1272 (1303)
||++|+|+|.
T Consensus 542 ~l~~G~i~~~ 551 (555)
T TIGR01194 542 KLAAGCIVKD 551 (555)
T ss_pred EEECCEEEEe
Confidence 9999999974
No 75
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=6e-71 Score=683.57 Aligned_cols=217 Identities=26% Similarity=0.426 Sum_probs=179.7
Q ss_pred cEEEEeeEEECCCC--------CCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCC
Q 000751 1053 SIELKNVDFCYPSR--------PEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYN 1124 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~--------~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~ 1124 (1303)
.|+++||+++|+.. ...++|+|+||+|++||++||+|+||||||||+++|.|+++ ++|+|++||.++...+
T Consensus 275 ~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~-~~G~i~~~g~~i~~~~ 353 (529)
T PRK15134 275 LLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN-SQGEIWFDGQPLHNLN 353 (529)
T ss_pred cccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC-CCcEEEECCEEccccc
Confidence 48999999999621 12359999999999999999999999999999999999995 8999999999998776
Q ss_pred HHH---hhcceEEEccCC--ccCc-ccHHHHHHcCCC----CCC----HHHHHHHHHHhchH-HHHHhCCCCcccccCCC
Q 000751 1125 LRW---LRNHLGLVQQEP--IIFS-TTIRENIIYARH----NAS----EAEVKEAARIANAH-HFISSLPHGYDTHVGMR 1189 (1303)
Q Consensus 1125 ~~~---lR~~i~~VpQdp--~LF~-gTIreNl~~g~~----~~~----~~ei~~al~~a~l~-~~I~~lp~Gldt~vge~ 1189 (1303)
... +|++++||||+| .+|+ .|++||+.++.. ..+ ++++.++++..++. +.. ...
T Consensus 354 ~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~ 422 (529)
T PRK15134 354 RRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEVGLDPETR-----------HRY 422 (529)
T ss_pred hhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHcCCCHHHH-----------hcC
Confidence 543 578899999998 3665 599999986421 011 12344555555543 222 223
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCC
Q 000751 1190 GVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGG 1267 (1303)
Q Consensus 1190 G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G 1267 (1303)
..+||||||||++||||++.+|+||||||||++||+.+.+.+.+.|++..++ ++|+|+|||+++.+. .||+|++|++|
T Consensus 423 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G 502 (529)
T PRK15134 423 PAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQG 502 (529)
T ss_pred CccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeEEEEECC
Confidence 3489999999999999999999999999999999999999999999987543 689999999999876 59999999999
Q ss_pred EEEEecChHHHhhc
Q 000751 1268 RIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1268 ~Ive~Gt~~eLl~~ 1281 (1303)
+|++.|+++++++.
T Consensus 503 ~i~~~~~~~~~~~~ 516 (529)
T PRK15134 503 EVVEQGDCERVFAA 516 (529)
T ss_pred EEEEEcCHHHHhcC
Confidence 99999999999864
No 76
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2e-67 Score=697.88 Aligned_cols=215 Identities=23% Similarity=0.372 Sum_probs=186.7
Q ss_pred ccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcc
Q 000751 307 GNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQ 386 (1303)
Q Consensus 307 ~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 386 (1303)
..|+++|+++.|++ +++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....|+.
T Consensus 927 ~~L~I~nLsK~y~~-~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~ 1004 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQS 1004 (2272)
T ss_pred ceEEEEeEEEEecC-CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhc
Confidence 36999999999952 24579999999999999999999999999999999999999999999999999875 45667889
Q ss_pred eEEEeccccccc-HhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHH
Q 000751 387 IGLVTQEPALLS-LSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIA 458 (1303)
Q Consensus 387 i~~v~Q~~~l~~-~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialA 458 (1303)
||||+|++.+|. .|++|||.++. .... +++.+.++..+ ++........+||||||||++||
T Consensus 1005 IG~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~~v~~lL~~vg-----------L~~~~~~~~~~LSGGqKQRLsLA 1073 (2272)
T TIGR01257 1005 LGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTG-----------LHHKRNEEAQDLSGGMQRKLSVA 1073 (2272)
T ss_pred EEEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------CchhhcCChhhCCHHHHHHHHHH
Confidence 999999999886 69999998752 2222 23344444443 34444556678999999999999
Q ss_pred HhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhc
Q 000751 459 RAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 459 Ral~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
|||+.+|+|+|||||||+||+.+++.+.+.|+++.+|+|+|++||+++.+. .||||++|++|++++.|+.++|.++
T Consensus 1074 rALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~ 1150 (2272)
T TIGR01257 1074 IAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNC 1150 (2272)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHh
Confidence 999999999999999999999999999999999888999999999999986 4999999999999999999999765
No 77
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-70 Score=676.11 Aligned_cols=212 Identities=24% Similarity=0.378 Sum_probs=174.9
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHH-Hhcc
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW-LRSQ 386 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~~~~ 386 (1303)
-|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 5 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFG---PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 489999999994 346999999999999999999999999999999999999999999999999998877654 3467
Q ss_pred eEEEeccccccc-HhHHHHHhcCCC-C---------CHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHH
Q 000751 387 IGLVTQEPALLS-LSIRDNIAYGRD-A---------TLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKL 455 (1303)
Q Consensus 387 i~~v~Q~~~l~~-~ti~~ni~~~~~-~---------~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqri 455 (1303)
|+||+|++.++. .|++||+.++.. . +.++..+ .+.+.++.+ |+.........+||||||||+
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv 154 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRV-----RAAMMLLRV--GLKVDLDEKVANLSISHKQML 154 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHH-----HHHHHHHHc--CCCCCcccchhhCCHHHHHHH
Confidence 999999998876 599999987631 0 1111111 112222322 333334455568999999999
Q ss_pred HHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChH
Q 000751 456 SIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHD 529 (1303)
Q Consensus 456 alARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~ 529 (1303)
+|||||+.+|+||||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+. .||+|++|++|++++.|+++
T Consensus 155 ~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (510)
T PRK09700 155 EIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVS 230 (510)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchh
Confidence 99999999999999999999999999999999998874 4799999999999986 59999999999998766543
No 78
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=3.5e-70 Score=676.00 Aligned_cols=223 Identities=23% Similarity=0.389 Sum_probs=177.4
Q ss_pred cEEEEeeEEECCC--CCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEEC-Ce---eCCCCC--
Q 000751 1053 SIELKNVDFCYPS--RPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLD-GR---DLKLYN-- 1124 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~--~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~id-G~---di~~~~-- 1124 (1303)
.|+++||+++|++ ....++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++ |. ++...+
T Consensus 279 ~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~ 358 (520)
T TIGR03269 279 IIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPD 358 (520)
T ss_pred eEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchh
Confidence 4899999999963 112359999999999999999999999999999999999999999999996 64 334333
Q ss_pred -HHHhhcceEEEccCCccCc-ccHHHHHHcCCC-CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHH
Q 000751 1125 -LRWLRNHLGLVQQEPIIFS-TTIRENIIYARH-NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQ 1197 (1303)
Q Consensus 1125 -~~~lR~~i~~VpQdp~LF~-gTIreNl~~g~~-~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1197 (1303)
...+|++++||||++.+|+ .|++||+.++.. ... ++++.++++..++.+. ..+.........|||||
T Consensus 359 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~~~~~~~LSgGq 432 (520)
T TIGR03269 359 GRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELARMKAVITLKMVGFDEE------KAEEILDKYPDELSEGE 432 (520)
T ss_pred hHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCc------cchhhhhCChhhCCHHH
Confidence 2356778999999998887 499999975321 111 1234445555554210 00001222344799999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecCh
Q 000751 1198 KQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTH 1275 (1303)
Q Consensus 1198 rQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~ 1275 (1303)
|||++|||||+.+|+||||||||++||+.+.+.+.+.|++..++ ++|+|+|||+++.+. .||+|++|++|++++.|++
T Consensus 433 ~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~ 512 (520)
T TIGR03269 433 RHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDP 512 (520)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999999999999887543 689999999999876 4999999999999999999
Q ss_pred HHHhhc
Q 000751 1276 DSLLAK 1281 (1303)
Q Consensus 1276 ~eLl~~ 1281 (1303)
+++.++
T Consensus 513 ~~~~~~ 518 (520)
T TIGR03269 513 EEIVEE 518 (520)
T ss_pred HHHHhh
Confidence 988653
No 79
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=3.6e-70 Score=672.18 Aligned_cols=210 Identities=23% Similarity=0.377 Sum_probs=172.9
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHH-Hhcc
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW-LRSQ 386 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~~~~ 386 (1303)
-|+++|++++|+ +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.
T Consensus 4 ~i~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFP---GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeC---CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 389999999994 357999999999999999999999999999999999999999999999999987655443 4678
Q ss_pred eEEEeccccccc-HhHHHHHhcCCC-------CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHH
Q 000751 387 IGLVTQEPALLS-LSIRDNIAYGRD-------ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIA 458 (1303)
Q Consensus 387 i~~v~Q~~~l~~-~ti~~ni~~~~~-------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialA 458 (1303)
|+||+|++.++. .|++||+.++.. .+.++.++. +.+.++.+ |+.........+||||||||++||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 153 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAE-----ADKLLARL--NLRFSSDKLVGELSIGEQQMVEIA 153 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHH-----HHHHHHHc--CCCCCccCchhhCCHHHHHHHHHH
Confidence 999999998875 699999998642 112221111 12223332 333333445568999999999999
Q ss_pred HhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccC
Q 000751 459 RAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGT 527 (1303)
Q Consensus 459 Ral~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~ 527 (1303)
|||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 154 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~ 224 (501)
T PRK10762 154 KVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAERE 224 (501)
T ss_pred HHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecC
Confidence 99999999999999999999999999999998764 4789999999999886 599999999999987553
No 80
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-68 Score=680.94 Aligned_cols=500 Identities=22% Similarity=0.285 Sum_probs=421.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHH
Q 000751 35 YIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIH 114 (1303)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~ 114 (1303)
.+.+++++..++..++.+.+...+-+..+.|..++++++++.|+.|||. .++|.|+||++.|++.++.-+...+..++.
T Consensus 863 vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdt-TP~GRILNRFSkD~~~vD~~Lp~~~~~~~~ 941 (1381)
T KOG0054|consen 863 VYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDT-TPTGRILNRFSKDIDTVDVLLPFTLEFFLQ 941 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCC-CCccchhhhcccchHHHHHhhHHHHHHHHH
Confidence 3444555666667778888888899999999999999999999999999 599999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhhHHHHHHhchhH
Q 000751 115 NMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQD----AYAEAASIAEQAVSYIRTLYAFTNET 190 (1303)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~e~l~gi~~ik~~~~e~ 190 (1303)
.++.+++.++++.+..|++.++++ |+.+ +.+++.++..+.+++..+ ..+-..+++.|+++|+.+||+|+.++
T Consensus 942 ~~~~~l~~~~vi~~~~P~fli~~~---pl~v-~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~ 1017 (1381)
T KOG0054|consen 942 SLLNVLGILVVISYVTPWFLIAII---PLGV-IYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEE 1017 (1381)
T ss_pred HHHHHHHHHHHhhHHhHHHHHHHH---HHHH-HHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccH
Confidence 999999999999888887766554 3332 233344444444443332 33455689999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCC-ccHHHHHHHHHHHHHHHHHHHHHH
Q 000751 191 LAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVT-HNK-AHGGEIVTALFAVILSGLGLNQAA 268 (1303)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~-~g~-~~~g~l~~~~~~~~~~~~~l~~~~ 268 (1303)
++.+++....+...+..+.......|...-..++..+....+ +...+. .+. .++|.+-..+.|.+.+...+..+.
T Consensus 1018 rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~---al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~v 1094 (1381)
T KOG0054|consen 1018 RFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIA---ALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLV 1094 (1381)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 999999998888777766554444444333333333322222 222222 222 678888888889988888888889
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCC-CCCC-CCC--CCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEEC
Q 000751 269 TNFYSFDQGRIAAYRLYEMISRSSSTTN-YDGN-TLP--SVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVG 344 (1303)
Q Consensus 269 ~~~~~~~~~~~a~~ri~~~l~~~~~~~~-~~~~-~~~--~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG 344 (1303)
.....+.....|.+|+.+..+.+++.+. .+.. +++ |.+|.|+|+|++.+|.+ +.++|||||||+|+|||+++|||
T Consensus 1095 R~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp-~lp~VLk~is~~I~p~eKVGIVG 1173 (1381)
T KOG0054|consen 1095 RQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRP-NLPLVLKGISFTIKPGEKVGIVG 1173 (1381)
T ss_pred HHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCC-CCcchhcCceEEEcCCceEEEeC
Confidence 9999999999999999999986655111 1111 111 35789999999999964 34689999999999999999999
Q ss_pred CCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhc
Q 000751 345 RNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAH 424 (1303)
Q Consensus 345 ~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~ 424 (1303)
++|||||||++.|-|+.+|.+|+|.|||+|+.++.+.+||++++++||||.||+||+|.|+.--++++|+++|+|++.|+
T Consensus 1174 RTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~e~sD~~IW~ALe~~~ 1253 (1381)
T KOG0054|consen 1174 RTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFDEYSDDEIWEALERCQ 1253 (1381)
T ss_pred CCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCcccccCHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred chHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecC
Q 000751 425 AHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARR 504 (1303)
Q Consensus 425 ~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~ 504 (1303)
+.+++.++|.|+|+.|.|+|.|+|-||||-+||||||+|+++||+||||||++|++|...||+.|++..+++|||.|+||
T Consensus 1254 Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHR 1333 (1381)
T KOG0054|consen 1254 LKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHR 1333 (1381)
T ss_pred hHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCEEEEEeCceEeeccChHHHhhc-ChhHHHHHH
Q 000751 505 LSLIRNADYIAVMDEGRLFEMGTHDELLAT-GDLYAELLK 543 (1303)
Q Consensus 505 ~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~ 543 (1303)
++++-++|||+|||+|+|+|.|+|.+|+++ ++.|+++..
T Consensus 1334 l~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~ 1373 (1381)
T KOG0054|consen 1334 LNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLK 1373 (1381)
T ss_pred cchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHH
Confidence 999999999999999999999999999987 566665544
No 81
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.5e-69 Score=666.66 Aligned_cols=210 Identities=26% Similarity=0.401 Sum_probs=179.2
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHh-cc
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLR-SQ 386 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~-~~ 386 (1303)
.|+++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...++ ..
T Consensus 11 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYS---GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 499999999995 35699999999999999999999999999999999999999999999999999877766554 57
Q ss_pred eEEEeccccccc-HhHHHHHhcCCCCC---HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhc
Q 000751 387 IGLVTQEPALLS-LSIRDNIAYGRDAT---LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVL 462 (1303)
Q Consensus 387 i~~v~Q~~~l~~-~ti~~ni~~~~~~~---~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~ 462 (1303)
|+||+|++.++. .|++||+.++.... ++++.++++..++ +........+||||||||++|||||+
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgG~~qrv~la~aL~ 156 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGC-----------QLDLDSSAGSLEVADRQIVEILRGLM 156 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCC-----------CccccCChhhCCHHHHHHHHHHHHHH
Confidence 999999998886 59999999875211 2334444444443 22334455689999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 463 LNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 463 ~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (510)
T PRK15439 157 RDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADL 227 (510)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHc
Confidence 9999999999999999999999999998874 5799999999999886 5999999999999988876654
No 82
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.4e-69 Score=667.98 Aligned_cols=215 Identities=17% Similarity=0.317 Sum_probs=173.6
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-CccEEEECCeeCCCCCH-HHhhc
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-VAGQVLLDGRDLKLYNL-RWLRN 1130 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-~~G~I~idG~di~~~~~-~~lR~ 1130 (1303)
.|+++|++++|+......+|+|+||+|++||++||+|+||||||||+++|.|+++| .+|+|.++|.++...+. ..+|+
T Consensus 257 ~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~~ 336 (500)
T TIGR02633 257 ILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIRA 336 (500)
T ss_pred eEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 48999999999532123599999999999999999999999999999999999995 89999999999875443 56788
Q ss_pred ceEEEccCC---ccCc-ccHHHHHHcCCCC-------CCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCCh
Q 000751 1131 HLGLVQQEP---IIFS-TTIRENIIYARHN-------ASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTP 1195 (1303)
Q Consensus 1131 ~i~~VpQdp---~LF~-gTIreNl~~g~~~-------~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1195 (1303)
+++||||++ .+|+ .|+++|+.++... ... +++.++++..++.+ .-.+..+ ..|||
T Consensus 337 ~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~LSg 406 (500)
T TIGR02633 337 GIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKT------ASPFLPI----GRLSG 406 (500)
T ss_pred CCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccC------CCccCcc----ccCCH
Confidence 999999996 4665 5999999875210 111 12333343333210 0123333 47999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecC
Q 000751 1196 GQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1196 GQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt 1274 (1303)
|||||++||||++++|++|||||||++||+.+.+.+++.|+++...+.|+|+|||+++.+. .||+|++|++|+++..++
T Consensus 407 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~~ 486 (500)
T TIGR02633 407 GNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDFV 486 (500)
T ss_pred HHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEc
Confidence 9999999999999999999999999999999999999999887655789999999999876 599999999999998776
Q ss_pred hHH
Q 000751 1275 HDS 1277 (1303)
Q Consensus 1275 ~~e 1277 (1303)
..+
T Consensus 487 ~~~ 489 (500)
T TIGR02633 487 NHA 489 (500)
T ss_pred ccc
Confidence 544
No 83
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-69 Score=667.41 Aligned_cols=207 Identities=22% Similarity=0.371 Sum_probs=172.0
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCH-HHHhcc
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKL-EWLRSQ 386 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~~~~ 386 (1303)
.|+++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|++
T Consensus 4 ~l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFP---GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEEC---CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 489999999995 3469999999999999999999999999999999999999999999999999875543 456788
Q ss_pred eEEEeccccccc-HhHHHHHhcCCC------CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHH
Q 000751 387 IGLVTQEPALLS-LSIRDNIAYGRD------ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIAR 459 (1303)
Q Consensus 387 i~~v~Q~~~l~~-~ti~~ni~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialAR 459 (1303)
|+||+|++.+|. .|++||+.++.. .+..+..+. +.+.++.+ |++........+||||||||++|||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lar 153 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYE-----AREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAK 153 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHH-----HHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHH
Confidence 999999998886 599999998631 122221111 12233333 3333334456689999999999999
Q ss_pred hhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccccc-cCEEEEEeCceEee
Q 000751 460 AVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIRN-ADYIAVMDEGRLFE 524 (1303)
Q Consensus 460 al~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~ 524 (1303)
||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 154 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~ 220 (501)
T PRK11288 154 ALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVA 220 (501)
T ss_pred HHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999999999999998774 57999999999998864 99999999999875
No 84
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=4.4e-67 Score=701.35 Aligned_cols=213 Identities=23% Similarity=0.398 Sum_probs=182.4
Q ss_pred cEEEEeeEEECCCCC-CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc---CCccEEEECCeeCCCCCHHHh
Q 000751 1053 SIELKNVDFCYPSRP-EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD---PVAGQVLLDGRDLKLYNLRWL 1128 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~---~~~G~I~idG~di~~~~~~~l 1128 (1303)
.++++||+++|+.++ ..++|+|||++|+|||++||+||||||||||+++|.|+.+ |++|+|++||.++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~ 834 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSF 834 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhh
Confidence 378999999996322 3469999999999999999999999999999999999998 68899999999985 257
Q ss_pred hcceEEEccCCcc-CcccHHHHHHcCC----C-CCCHH----HHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1129 RNHLGLVQQEPII-FSTTIRENIIYAR----H-NASEA----EVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1129 R~~i~~VpQdp~L-F~gTIreNl~~g~----~-~~~~~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
|++++||||++.+ +..||||||.++. + ..+++ .+.++++..++. +-.|+.+|+.|.+||||||
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~-------~~~d~~v~~~~~~LSgGqr 907 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEME-------SYADAVVGVPGEGLNVEQR 907 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCh-------hhCCCeeCCCCCCCCHHHh
Confidence 8999999998764 5679999998742 1 22333 345566665553 3468999988889999999
Q ss_pred HHHHHHHHHhcCCC-EEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhH--hhcCEEEEEeCC-EEEEecC
Q 000751 1199 QRIAIARVVLKNAP-ILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMM--RHVDNIVVLNGG-RIVEEGT 1274 (1303)
Q Consensus 1199 QRlaLARAllr~p~-ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti--~~~D~Iivl~~G-~Ive~Gt 1274 (1303)
||++|||||+.+|+ ||+||||||+||+.+...|++.|++..++++|||+++|+++.. ..||+|++|++| ++++.|+
T Consensus 908 qRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~ 987 (1394)
T TIGR00956 908 KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGD 987 (1394)
T ss_pred hHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECC
Confidence 99999999999997 9999999999999999999999998866679999999999863 679999999997 9999999
Q ss_pred hH
Q 000751 1275 HD 1276 (1303)
Q Consensus 1275 ~~ 1276 (1303)
+.
T Consensus 988 ~~ 989 (1394)
T TIGR00956 988 LG 989 (1394)
T ss_pred cc
Confidence 74
No 85
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=2.6e-68 Score=579.63 Aligned_cols=469 Identities=27% Similarity=0.417 Sum_probs=365.2
Q ss_pred cEEEEEEEEEcCC-CCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecCCCCHH
Q 000751 308 NIEFRNVYFSYLS-RPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIKNLKLE 381 (1303)
Q Consensus 308 ~i~~~~v~f~y~~-~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~~~ 381 (1303)
-++++|+|..|.. .+...++++|||.|++||++||||+||||||--++.++|+++. -+|+|.++|.|+-..+..
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 4788998888852 2345799999999999999999999999999999999999865 379999999999999988
Q ss_pred HHhc----ceEEEeccccc-cc------HhHHHHHhcCC----CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCC
Q 000751 382 WLRS----QIGLVTQEPAL-LS------LSIRDNIAYGR----DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLA 446 (1303)
Q Consensus 382 ~~~~----~i~~v~Q~~~l-~~------~ti~~ni~~~~----~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~ 446 (1303)
.+|+ +|++++|||.- .| .-|.|-|.+-+ .+-.+++.+.++.+++.+--. .+..-...
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p~~--------rl~~yPHe 157 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEPEK--------RLDAYPHE 157 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCchhh--------hhhhCCcc
Confidence 8875 79999999952 12 24555565543 233456666677776643211 22333457
Q ss_pred CChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccc-cCEEEEEeCceEe
Q 000751 447 LTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRN-ADYIAVMDEGRLF 523 (1303)
Q Consensus 447 LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~ 523 (1303)
||||||||+.||-||..+|++||-||||.|||.....+|.+.|+++. .|..+++|||++..++. ||||+||.+|+++
T Consensus 158 LSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~iv 237 (534)
T COG4172 158 LSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIV 237 (534)
T ss_pred cCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEe
Confidence 99999999999999999999999999999999999999999998875 48999999999999986 9999999999999
Q ss_pred eccChHHHhhcCh-hHHHHHHHHHhccCCCCCCccCcccccccccccCccCCCCCCCCCCcccCCCCccccccccCCCCC
Q 000751 524 EMGTHDELLATGD-LYAELLKCEEAAKLPRRMPVRNYKETSTFQIEKDSSASHSFQEPSSPKMLKSPSLQRVGIYRPTDG 602 (1303)
Q Consensus 524 ~~g~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (1303)
|.|+.+++.+... .|.+..
T Consensus 238 E~~~t~~lF~~PqHpYTr~L------------------------------------------------------------ 257 (534)
T COG4172 238 ETGTTETLFAAPQHPYTRKL------------------------------------------------------------ 257 (534)
T ss_pred ecCcHHHHhhCCCChHHHHH------------------------------------------------------------
Confidence 9998777654310 010000
Q ss_pred CCCCCCCCCCCCCchhhhhhcCCCCCccCCCccccccccccccCCCCCccccccccccCCCCCCCCCCCCCCCCCCCccc
Q 000751 603 AFDSQESPKVLSPPSEKMLENGMPMDAADKEPSIRRQDSFEMRLPELPKIDVHSSNRQTSNGSDPESPISPLLTSDPKNE 682 (1303)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1303)
T Consensus 258 -------------------------------------------------------------------------------- 257 (534)
T COG4172 258 -------------------------------------------------------------------------------- 257 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccCCCCCCCCCCcchhhhhhhccCcchHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 000751 683 RSHSQTFSRPHSHSDDFPTKVREEESKHQKAPSFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPE 762 (1303)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (1303)
T Consensus 258 -------------------------------------------------------------------------------- 257 (534)
T COG4172 258 -------------------------------------------------------------------------------- 257 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHH
Q 000751 763 ERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDAT 842 (1303)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~ 842 (1303)
T Consensus 258 -------------------------------------------------------------------------------- 257 (534)
T COG4172 258 -------------------------------------------------------------------------------- 257 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000751 843 FVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRN 922 (1303)
Q Consensus 843 ~i~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g 922 (1303)
T Consensus 258 -------------------------------------------------------------------------------- 257 (534)
T COG4172 258 -------------------------------------------------------------------------------- 257 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHH
Q 000751 923 IYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSF 1002 (1303)
Q Consensus 923 i~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~ 1002 (1303)
T Consensus 258 -------------------------------------------------------------------------------- 257 (534)
T COG4172 258 -------------------------------------------------------------------------------- 257 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccEEEEeeEEECCCCC--------Ccceeee
Q 000751 1003 ATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRP--------EVLVLSN 1074 (1303)
Q Consensus 1003 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~--------~~~vL~~ 1074 (1303)
++.+|.-.+. ..+....--++.+||...||-++ ...++++
T Consensus 258 ----------------------------l~aeP~g~~~----p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~ 305 (534)
T COG4172 258 ----------------------------LAAEPSGDPP----PLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDG 305 (534)
T ss_pred ----------------------------HhcCCCCCCC----CCCCCCCceEEecceEEEEecCCccccccchheEEecc
Confidence 0000100000 00001112355666666664211 1358999
Q ss_pred eeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHH---hhcceEEEccCCc--cC-cccHHH
Q 000751 1075 FSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRW---LRNHLGLVQQEPI--IF-STTIRE 1148 (1303)
Q Consensus 1075 isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~---lR~~i~~VpQdp~--LF-~gTIre 1148 (1303)
|||+.++||++||||+|||||||+-.+|+|+.++. |+|.++|.||..++.+. +|+++-+|+|||+ |= ..||.+
T Consensus 306 isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~q 384 (534)
T COG4172 306 ISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQ 384 (534)
T ss_pred ceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHH
Confidence 99999999999999999999999999999999875 99999999999998764 6899999999996 22 247766
Q ss_pred HHHcC----CCCCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCC
Q 000751 1149 NIIYA----RHNAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEAS 1220 (1303)
Q Consensus 1149 Nl~~g----~~~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaT 1220 (1303)
-|.=| .|..+ ++.+.+|++.+|++.-... .-...+|||||||||||||++-+|++++|||||
T Consensus 385 II~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~r~----------RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPT 454 (534)
T COG4172 385 IIEEGLRVHEPKLSAAERDQRVIEALEEVGLDPATRN----------RYPHEFSGGQRQRIAIARALILKPELILLDEPT 454 (534)
T ss_pred HhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhHhh----------cCCcccCcchhhHHHHHHHHhcCCcEEEecCCc
Confidence 66433 23333 4568888998888654321 123479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHHHhhc-CchhHH
Q 000751 1221 SSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDSLLAK-NGLYVR 1287 (1303)
Q Consensus 1221 SaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~eLl~~-~g~y~~ 1287 (1303)
||||.-.+++|.+.++++.+ .+-+-++|+|+|..++. ||+|+||.+|+|||+|+-++++++ +..|.+
T Consensus 455 SALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~ 524 (534)
T COG4172 455 SALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTR 524 (534)
T ss_pred hHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHH
Confidence 99999999999999997643 25699999999999875 999999999999999999999987 445654
No 86
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.6e-68 Score=657.02 Aligned_cols=208 Identities=23% Similarity=0.266 Sum_probs=176.7
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
|+++|++|+|+ +.++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 4 l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 4 LQISQGTFRLS---DTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred EEEEeEEEEcC---CeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 88999999995 346999999999999999999999999999999999999999999999998887777677778899
Q ss_pred EEeccccc---------ccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHH
Q 000751 389 LVTQEPAL---------LSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIAR 459 (1303)
Q Consensus 389 ~v~Q~~~l---------~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialAR 459 (1303)
|++|++.+ +..|+++|+.++.. .++++.++++..++.+. .......||||||||++|||
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la~ 148 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITAL-----------LDRRFKYLSTGETRKTLLCQ 148 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHhh-----------hhCCcccCCHHHHHHHHHHH
Confidence 99998753 24689999876421 23445555655555433 33445689999999999999
Q ss_pred hhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHH
Q 000751 460 AVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 460 al~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||+.+|++|||||||++||+++.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|+++..|+.+++
T Consensus 149 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 222 (490)
T PRK10938 149 ALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEI 222 (490)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999998874 47899999999998865 999999999999988876654
No 87
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-68 Score=655.73 Aligned_cols=207 Identities=24% Similarity=0.341 Sum_probs=172.2
Q ss_pred EEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCH-HHHhcceEE
Q 000751 311 FRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKL-EWLRSQIGL 389 (1303)
Q Consensus 311 ~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~~~~i~~ 389 (1303)
++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. +.+++.++|
T Consensus 1 ~~nl~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 77 (491)
T PRK10982 1 MSNISKSFP---GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISM 77 (491)
T ss_pred CCceEEEeC---CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEE
Confidence 368999995 3469999999999999999999999999999999999999999999999999876554 446778999
Q ss_pred Eecccccc-cHhHHHHHhcCCC------CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhc
Q 000751 390 VTQEPALL-SLSIRDNIAYGRD------ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVL 462 (1303)
Q Consensus 390 v~Q~~~l~-~~ti~~ni~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~ 462 (1303)
|+|++.++ ..|++||+.++.. .+.++..+. +.+.++.+ |++........+||||||||++|||||+
T Consensus 78 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~ 150 (491)
T PRK10982 78 VHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRD-----TKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFS 150 (491)
T ss_pred EecccccccCCCHHHHhhcccccccccccCHHHHHHH-----HHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHH
Confidence 99999876 4699999997641 122222111 22333333 4444455667789999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccC
Q 000751 463 LNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGT 527 (1303)
Q Consensus 463 ~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~ 527 (1303)
++|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+. .||+|++|++|++++.|+
T Consensus 151 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~ 217 (491)
T PRK10982 151 YNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQP 217 (491)
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecC
Confidence 9999999999999999999999999998864 5799999999999886 599999999999987654
No 88
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-67 Score=646.29 Aligned_cols=203 Identities=20% Similarity=0.345 Sum_probs=173.3
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|. +++
T Consensus 319 ~l~~~~l~~~~~~~---~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~-----------~~i 384 (530)
T PRK15064 319 ALEVENLTKGFDNG---PLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSEN-----------ANI 384 (530)
T ss_pred eEEEEeeEEeeCCc---eeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCc-----------eEE
Confidence 59999999999643 4999999999999999999999999999999999999999999999983 579
Q ss_pred EEEccCCc--cCc-ccHHHHHHcCC-CCCCHHHHHHHHHHhchH-HHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHH
Q 000751 1133 GLVQQEPI--IFS-TTIRENIIYAR-HNASEAEVKEAARIANAH-HFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVV 1207 (1303)
Q Consensus 1133 ~~VpQdp~--LF~-gTIreNl~~g~-~~~~~~ei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAl 1207 (1303)
+||||++. +++ .|+++|+.+.. ....++++.++++..++. +.. + ....+||||||||++||||+
T Consensus 385 ~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~----~~~~~LSgGq~qrv~la~al 453 (530)
T PRK15064 385 GYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDDI-------K----KSVKVLSGGEKGRMLFGKLM 453 (530)
T ss_pred EEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhHh-------c----CcccccCHHHHHHHHHHHHH
Confidence 99999984 443 69999997532 222345667777777662 222 2 22348999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEEE-EecChHHHhhcCc
Q 000751 1208 LKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRIV-EEGTHDSLLAKNG 1283 (1303)
Q Consensus 1208 lr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Iv-e~Gt~~eLl~~~g 1283 (1303)
+++|+||||||||++||+.+...+.+.|++. +.|+|+|||+++.+.. ||+|++|++|+++ +.|+++++++.+|
T Consensus 454 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~~~ 528 (530)
T PRK15064 454 MQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRSQG 528 (530)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHHhC
Confidence 9999999999999999999999999999875 3699999999998764 9999999999998 7899999887655
No 89
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=3e-65 Score=635.23 Aligned_cols=471 Identities=18% Similarity=0.207 Sum_probs=380.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 44 FAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGL 123 (1303)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~ 123 (1303)
+++.+++.++....+.++..++|.+++++++++|+.+|+++ ++|++++|+++|++.+..++. .++.++.+++.+++.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~-~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~ 139 (547)
T PRK10522 62 MAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQL-GSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSA 139 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhcc-CccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 45667777888888999999999999999999999999995 889999999999999998776 4778888889999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchh---HHHHHHHHHHH
Q 000751 124 AIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNE---TLAKYSYATSL 200 (1303)
Q Consensus 124 ~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e---~~~~~~~~~~~ 200 (1303)
+++++++|.+++++++.+|+.+++..++.++.++..++.++..+++++.+.|.++|+++++ ++.+ +.+.++|.+..
T Consensus 140 ~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~ 218 (547)
T PRK10522 140 AYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDA 218 (547)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHH
Confidence 9999999999999999999988888888888888888889999999999999999999996 4443 34567777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 201 QATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGRIA 280 (1303)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a 280 (1303)
++..+...+..........+...+..+..++.+++++.. +..+.+.+..+.++...+..|+..+...+..++.++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a 295 (547)
T PRK10522 219 QEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVA 295 (547)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776665555444433322222222222222233333322 11233333333344444567999999999999999999
Q ss_pred HHHHHHHhccCCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhcc
Q 000751 281 AYRLYEMISRSSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERF 360 (1303)
Q Consensus 281 ~~ri~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~ 360 (1303)
.+|+.++++.+++.+...... .+..+.|+++||+|+|++ ++++|+|+||+|++||++||+||||||||||+++|+|+
T Consensus 296 ~~ri~~l~~~~~~~~~~~~~~-~~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~ 372 (547)
T PRK10522 296 FNKLNKLALAPYKAEFPRPQA-FPDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGL 372 (547)
T ss_pred HHHHHHHhccccccccccccc-cCcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 999999976543221111111 112347999999999973 34799999999999999999999999999999999999
Q ss_pred CCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcccccCccc
Q 000751 361 YDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLEKGYETQV 440 (1303)
Q Consensus 361 ~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v 440 (1303)
|+|++|+|.+||+|+++++.+++|++|+||+|||++|++|++|| +.+.++++++++++.+++.+++. .|+|.
T Consensus 373 ~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~-~~~~~---- 444 (547)
T PRK10522 373 YQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLE-LEDGR---- 444 (547)
T ss_pred CCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhh-ccccC----
Confidence 99999999999999999999999999999999999999999999 45677888888888887776654 24442
Q ss_pred cCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccccCEEEEEe
Q 000751 441 GRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRNADYIAVMD 518 (1303)
Q Consensus 441 g~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~~d~i~~l~ 518 (1303)
.+|.+|||||||||+||||++++|+|||||||||+||+++++.+.+.+.+.. +++|+|+||||++.++.||+|++|+
T Consensus 445 -~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~ 523 (547)
T PRK10522 445 -ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMR 523 (547)
T ss_pred -CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEE
Confidence 1488999999999999999999999999999999999999999999887553 4899999999999999999999999
Q ss_pred CceEeec-cChHHHh
Q 000751 519 EGRLFEM-GTHDELL 532 (1303)
Q Consensus 519 ~G~i~~~-g~~~~l~ 532 (1303)
+|++++. |++.+-.
T Consensus 524 ~G~i~e~~~~~~~~~ 538 (547)
T PRK10522 524 NGQLSELTGEERDAA 538 (547)
T ss_pred CCEEEEecCCchhhh
Confidence 9999986 5554433
No 90
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=6.8e-64 Score=623.07 Aligned_cols=475 Identities=17% Similarity=0.243 Sum_probs=367.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 786 VVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVA 865 (1303)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~ 865 (1303)
.++.++..++..+++.++..++|.++|++++++|++||++ +++|++++|+++|++.+...+. .+..++..++.++++
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~--~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~ 138 (547)
T PRK10522 62 MAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQ--LGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGS 138 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhc--cCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 4466778888889999999999999999999999999975 6789999999999999998765 466778888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcch---HHHHHHHHHH
Q 000751 866 VIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAG---NKVMELYRLQ 942 (1303)
Q Consensus 866 ~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~---~~~~~~~~~~ 942 (1303)
++++++++|.+++++++.+|+.++......+..++..++.++...+....+.|.++|+++++ ++.+ +.+.++|++.
T Consensus 139 ~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~ 217 (547)
T PRK10522 139 AAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPD 217 (547)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHH
Confidence 99999999999999998888877666555555565666777788888899999999999995 4433 4566777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q 000751 943 LKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRK 1022 (1303)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1022 (1303)
.++..+...+..........+...+..+..++.+++++... .+.++. .............++.........+..+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~ 294 (547)
T PRK10522 218 AQEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFYMANSLG-WADTNV--AATYSLTLLFLRTPLLSAVGALPTLLSAQV 294 (547)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCChHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66665554444333333222222222222333333433221 122222 211112222233456666677777888889
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHH
Q 000751 1023 SLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLI 1102 (1303)
Q Consensus 1023 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL 1102 (1303)
+++|+.++.+.+++.+. + .. .+.+..+.|+|+||+|+|+++ .++|+|+||+|+|||++|||||||||||||+++|
T Consensus 295 a~~ri~~l~~~~~~~~~-~-~~-~~~~~~~~i~~~~v~f~y~~~--~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll 369 (547)
T PRK10522 295 AFNKLNKLALAPYKAEF-P-RP-QAFPDWQTLELRNVTFAYQDN--GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLL 369 (547)
T ss_pred HHHHHHHHhcccccccc-c-cc-cccCcCceEEEEEEEEEeCCC--CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 99999888654321111 1 11 111123579999999999853 3599999999999999999999999999999999
Q ss_pred hccccCCccEEEECCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCc
Q 000751 1103 ERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGY 1182 (1303)
Q Consensus 1103 ~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gl 1182 (1303)
+|+|+|++|+|++||+|+++++.+.+|++++||||||++|++|+++| + ++.++++++++++.+++.+++.. |+|.
T Consensus 370 ~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 444 (547)
T PRK10522 370 TGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLEL-EDGR 444 (547)
T ss_pred hCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhhc-cccC
Confidence 99999999999999999999999999999999999999999999999 3 35678888888888887766642 4442
Q ss_pred ccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHhhcCEE
Q 000751 1183 DTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMRHVDNI 1261 (1303)
Q Consensus 1183 dt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~~~D~I 1261 (1303)
.+|.+||||||||++||||++++|+|||||||||+||+++|+.+.+.+.+..+ .++|+|+||||+++++.||+|
T Consensus 445 -----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i 519 (547)
T PRK10522 445 -----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRL 519 (547)
T ss_pred -----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEE
Confidence 24889999999999999999999999999999999999999999999876542 369999999999999999999
Q ss_pred EEEeCCEEEEe-cChHHHhhcC
Q 000751 1262 VVLNGGRIVEE-GTHDSLLAKN 1282 (1303)
Q Consensus 1262 ivl~~G~Ive~-Gt~~eLl~~~ 1282 (1303)
++|++|+++|. |++.+-..++
T Consensus 520 ~~l~~G~i~e~~~~~~~~~~~~ 541 (547)
T PRK10522 520 LEMRNGQLSELTGEERDAASRD 541 (547)
T ss_pred EEEECCEEEEecCCchhhhhhh
Confidence 99999999987 6666655444
No 91
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=6.7e-65 Score=631.23 Aligned_cols=202 Identities=22% Similarity=0.344 Sum_probs=165.5
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++. .+|
T Consensus 324 ~l~~~~l~~~~~~~---~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~-----------~~i 389 (556)
T PRK11819 324 VIEAENLSKSFGDR---LLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGET-----------VKL 389 (556)
T ss_pred EEEEEeEEEEECCe---eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCc-----------eEE
Confidence 59999999999643 4999999999999999999999999999999999999999999999642 169
Q ss_pred EEEccCC-ccCc-ccHHHHHHcCCCC----CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1133 GLVQQEP-IIFS-TTIRENIIYARHN----ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1133 ~~VpQdp-~LF~-gTIreNl~~g~~~----~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
+||||++ .++. .|++||+.++... ..+.+..++++..++.+. ..+.. ...||||||||++||||
T Consensus 390 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~----~~~LSgG~~qrv~la~a 459 (556)
T PRK11819 390 AYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGG------DQQKK----VGVLSGGERNRLHLAKT 459 (556)
T ss_pred EEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChh------HhcCc----hhhCCHHHHHHHHHHHH
Confidence 9999997 5665 5999999875321 112333444444443210 12233 34799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeC-CEEEE-ecChHHHhhc
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNG-GRIVE-EGTHDSLLAK 1281 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~-G~Ive-~Gt~~eLl~~ 1281 (1303)
++.+|++|||||||++||+.+...+.+.|++. . .|+|+|||+++.+. .||+|++|++ |++.+ .|+++++++.
T Consensus 460 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~ 534 (556)
T PRK11819 460 LKQGGNVLLLDEPTNDLDVETLRALEEALLEF--P-GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEED 534 (556)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--C-CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHH
Confidence 99999999999999999999999999999886 2 59999999999776 4999999986 88874 7898888765
No 92
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.2e-64 Score=629.07 Aligned_cols=208 Identities=23% Similarity=0.309 Sum_probs=170.2
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
-|+++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +..|
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 70 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-----------GIKV 70 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 4899999999951 35799999999999999999999999999999999999999999999975 2469
Q ss_pred EEEeccccccc-HhHHHHHhcCCC------------------CCH---------HHHHHHHHHhcchH-------HHHhc
Q 000751 388 GLVTQEPALLS-LSIRDNIAYGRD------------------ATL---------DQIEEAAKIAHAHT-------FISSL 432 (1303)
Q Consensus 388 ~~v~Q~~~l~~-~ti~~ni~~~~~------------------~~~---------~~~~~~~~~~~~~~-------~i~~l 432 (1303)
|||+|+|+++. .|++||+.++.. ..+ .++.++++.++.++ .++.+
T Consensus 71 ~~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 150 (552)
T TIGR03719 71 GYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL 150 (552)
T ss_pred EEEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC
Confidence 99999999885 699999987521 001 12444444444332 22222
Q ss_pred ccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccc-c
Q 000751 433 EKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRN-A 511 (1303)
Q Consensus 433 ~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~-~ 511 (1303)
|++ .......+||||||||++|||||+.+|++|||||||++||+++...+.+.|.+. ++|+|+|||+++.+.. |
T Consensus 151 --~l~-~~~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~--~~tvIiisHd~~~~~~~~ 225 (552)
T TIGR03719 151 --RCP-PWDADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY--PGTVVAVTHDRYFLDNVA 225 (552)
T ss_pred --CCC-cccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhc
Confidence 332 134556789999999999999999999999999999999999999999999876 3699999999999875 9
Q ss_pred CEEEEEeCceEe-eccChHHHhh
Q 000751 512 DYIAVMDEGRLF-EMGTHDELLA 533 (1303)
Q Consensus 512 d~i~~l~~G~i~-~~g~~~~l~~ 533 (1303)
|+|++|++|+++ ..|+++++.+
T Consensus 226 d~v~~l~~g~i~~~~g~~~~~~~ 248 (552)
T TIGR03719 226 GWILELDRGRGIPWEGNYSSWLE 248 (552)
T ss_pred CeEEEEECCEEEEecCCHHHHHH
Confidence 999999999976 6788877653
No 93
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=6e-63 Score=657.41 Aligned_cols=215 Identities=21% Similarity=0.406 Sum_probs=179.8
Q ss_pred ccEEEEeeEEECCCC----------CCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC--CccEEEECCee
Q 000751 1052 GSIELKNVDFCYPSR----------PEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP--VAGQVLLDGRD 1119 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~----------~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~--~~G~I~idG~d 1119 (1303)
..+.|+||++..+.. ....+|+|||++|+|||.+||+||||||||||+++|.|..++ .+|+|.+||.+
T Consensus 866 ~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~ 945 (1470)
T PLN03140 866 LAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFP 945 (1470)
T ss_pred ceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCcc
Confidence 369999999997521 123699999999999999999999999999999999999874 68999999988
Q ss_pred CCCCCHHHhhcceEEEccCCccCc-ccHHHHHHcCC----C-CCCHH----HHHHHHHHhchHHHHHhCCCCcccccCCC
Q 000751 1120 LKLYNLRWLRNHLGLVQQEPIIFS-TTIRENIIYAR----H-NASEA----EVKEAARIANAHHFISSLPHGYDTHVGMR 1189 (1303)
Q Consensus 1120 i~~~~~~~lR~~i~~VpQdp~LF~-gTIreNl~~g~----~-~~~~~----ei~~al~~a~l~~~I~~lp~Gldt~vge~ 1189 (1303)
+.+ ..+|+.++||+|++.+++ .||+|||.++. + ..+++ .+.++++..++.+. .|+.+|..
T Consensus 946 ~~~---~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~ 1015 (1470)
T PLN03140 946 KKQ---ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLP 1015 (1470)
T ss_pred CCh---HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCC
Confidence 643 456788999999998876 59999998642 1 22332 25566666666442 46777754
Q ss_pred C-CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchh--HhhcCEEEEEeC
Q 000751 1190 G-VDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAM--MRHVDNIVVLNG 1266 (1303)
Q Consensus 1190 G-~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~t--i~~~D~Iivl~~ 1266 (1303)
+ ..||||||||++|||||+.+|+||+||||||+||+.+...+.+.|++....++|||+++|+++. ...||++++|++
T Consensus 1016 ~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~ 1095 (1470)
T PLN03140 1016 GVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1095 (1470)
T ss_pred CCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcC
Confidence 4 5799999999999999999999999999999999999999999999987667999999999984 577999999996
Q ss_pred -CEEEEecChH
Q 000751 1267 -GRIVEEGTHD 1276 (1303)
Q Consensus 1267 -G~Ive~Gt~~ 1276 (1303)
|++++.|+..
T Consensus 1096 gG~~v~~G~~~ 1106 (1470)
T PLN03140 1096 GGQVIYSGPLG 1106 (1470)
T ss_pred CCEEEEECCcc
Confidence 8999999864
No 94
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-63 Score=618.46 Aligned_cols=201 Identities=20% Similarity=0.373 Sum_probs=166.3
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+++|++. ++|+|+||+|++|+++||+||||||||||+++|.|+++|++|+|.+++. .++
T Consensus 312 ~l~~~~l~~~y~~~---~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 312 LLKMEKVSAGYGDR---IILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred eEEEEeeEEEeCCe---eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 59999999999642 5999999999999999999999999999999999999999999999741 269
Q ss_pred EEEccCC--ccCc-ccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhc
Q 000751 1133 GLVQQEP--IIFS-TTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLK 1209 (1303)
Q Consensus 1133 ~~VpQdp--~LF~-gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr 1209 (1303)
+|++|++ .++. .|+.+++....+...++++.+.++..++.+. -.+.++ ..||||||||++||||+++
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~------~~~~~~----~~LSgGekqRl~La~~l~~ 447 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQGD------KVTEET----RRFSGGEKARLVLALIVWQ 447 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCChh------HhcCch----hhCCHHHHHHHHHHHHHhc
Confidence 9999985 3443 4888887522222234556666666655211 122333 4799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEE-EecChHHHhh
Q 000751 1210 NAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIV-EEGTHDSLLA 1280 (1303)
Q Consensus 1210 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Iv-e~Gt~~eLl~ 1280 (1303)
+|+||||||||++||+.+...+.+.|++. + .|||+|||++..+. .||+|++|++|+++ ..|++++..+
T Consensus 448 ~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 448 RPNLLLLDEPTNHLDLDMRQALTEALIDF--E-GALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 99999999999999999999999999886 3 59999999999886 49999999999997 6899998754
No 95
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=3.2e-61 Score=605.97 Aligned_cols=201 Identities=23% Similarity=0.401 Sum_probs=165.1
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+++|+++ ++|+|+||+|++|+++||+||||||||||+++|.|+++|++|+|.+ |.++ +|
T Consensus 319 ~l~~~~l~~~~~~~---~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i 384 (635)
T PRK11147 319 VFEMENVNYQIDGK---QLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EV 384 (635)
T ss_pred eEEEeeeEEEECCe---EEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EE
Confidence 48999999999643 4999999999999999999999999999999999999999999999 4332 59
Q ss_pred EEEccCC-ccCc-ccHHHHHHcCCCCC--C--HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1133 GLVQQEP-IIFS-TTIRENIIYARHNA--S--EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1133 ~~VpQdp-~LF~-gTIreNl~~g~~~~--~--~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
+|++|++ .+++ .|+.||+.++.+.. + +.++.+.++..++.+ +..+.++ ..||||||||++||||
T Consensus 385 ~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~LSgGekqRl~la~a 454 (635)
T PRK11147 385 AYFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHP------KRAMTPV----KALSGGERNRLLLARL 454 (635)
T ss_pred EEEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCH------HHHhChh----hhCCHHHHHHHHHHHH
Confidence 9999986 4665 49999998754321 1 233444444444311 1123334 3799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEe-CCEEEE-ecChHHHhh
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLN-GGRIVE-EGTHDSLLA 1280 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~-~G~Ive-~Gt~~eLl~ 1280 (1303)
++.+|++|||||||++||..+...+.+.+++. +.|+|+|||+.+.+. .||+|++|+ +|+|++ .|+|++.++
T Consensus 455 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 455 FLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 99999999999999999999999999999875 369999999999875 599999998 899987 588888754
No 96
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=1.2e-60 Score=600.64 Aligned_cols=460 Identities=14% Similarity=0.079 Sum_probs=392.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 41 GGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFF 120 (1303)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~~ 120 (1303)
+...+..++..++......++..++|.+++++....++.+||+ ++|++.+|+++|++.+.+.+...+..++..++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~--~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii 227 (659)
T TIGR00954 150 FINSAIKYLLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS--RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVI 227 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC--CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555566666666778888888888998888888889985 57999999999999999999999999999999999
Q ss_pred HHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHH
Q 000751 121 SGLAIAFV-NCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATS 199 (1303)
Q Consensus 121 ~~~~~~~~-~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~ 199 (1303)
+.+++++. ++|.+++++++..|+.+++..++.+++.+...+.++..++..+...|.++|+++||+|+.|+.+.++|++.
T Consensus 228 ~~~~~L~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~ 307 (659)
T TIGR00954 228 LYSFKLLTALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSS 307 (659)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHH
Confidence 88888886 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH-h----CCccHHHHHH-HHHH---HHHHHHHHHHHH
Q 000751 200 LQATLRYGILISLVQGLGLGFTYGLAIC--SCALQLWVGRFLVT-H----NKAHGGEIVT-ALFA---VILSGLGLNQAA 268 (1303)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~v~-~----g~~~~g~l~~-~~~~---~~~~~~~l~~~~ 268 (1303)
.++..+...+.....+...++..++... ..++.++.|...+. + |.+|.|.+++ ++.+ +..+..|+..+.
T Consensus 308 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~ 387 (659)
T TIGR00954 308 FYRLVEHLNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLM 387 (659)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888888888777777766542 23333344443332 2 7899888776 4443 445578999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCC--------CCC--C--------------CCCCCCCccEEEEEEEEEcCCCCCC
Q 000751 269 TNFYSFDQGRIAAYRLYEMISRSSSTT--------NYD--G--------------NTLPSVHGNIEFRNVYFSYLSRPEI 324 (1303)
Q Consensus 269 ~~~~~~~~~~~a~~ri~~~l~~~~~~~--------~~~--~--------------~~~~~~~~~i~~~~v~f~y~~~~~~ 324 (1303)
..+..++++.++.+|+.++++.+++.. ... + .......+.|+++||+|+|++ ++
T Consensus 388 ~~~~~i~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~ 465 (659)
T TIGR00954 388 LAGRDMTRLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GD 465 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CC
Confidence 999999999999999999997532210 000 0 001112346999999999963 34
Q ss_pred CcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHH
Q 000751 325 PILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDN 404 (1303)
Q Consensus 325 ~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~n 404 (1303)
++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+++ |++|+||+|+|++|++|++||
T Consensus 466 ~il~~isl~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~en 534 (659)
T TIGR00954 466 VLIESLSFEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQ 534 (659)
T ss_pred eeeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHH
Confidence 799999999999999999999999999999999999999999999874 568999999999999999999
Q ss_pred HhcCC--------CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCC
Q 000751 405 IAYGR--------DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGG 476 (1303)
Q Consensus 405 i~~~~--------~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~ 476 (1303)
|.++. +.+++++.++++.+++++++.+ |.|+||..+ .+.+||||||||++||||++++|+++|||||||+
T Consensus 535 i~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~ 612 (659)
T TIGR00954 535 IIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSA 612 (659)
T ss_pred HhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccC
Confidence 99873 3567889999999999999988 999999976 5679999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeC
Q 000751 477 LDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDE 519 (1303)
Q Consensus 477 lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~ 519 (1303)
||+++++.+.+.+++. ++|+|+||||++.++.||+|++|++
T Consensus 613 LD~~~~~~l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 613 VSVDVEGYMYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred CCHHHHHHHHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 9999999999998774 8999999999999999999999974
No 97
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=2e-61 Score=605.31 Aligned_cols=200 Identities=24% Similarity=0.406 Sum_probs=165.0
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+++|++.. ++|+|+||+|++|+++||+||||||||||+++|.|+.+|++|+|.+++ +.+|
T Consensus 508 ~L~~~~ls~~y~~~~--~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 508 IISFSDASFGYPGGP--LLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred eEEEEeeEEEeCCCC--eeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 599999999996432 499999999999999999999999999999999999999999999976 2479
Q ss_pred EEEccCCccCcccHHHHHHc----CCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHh
Q 000751 1133 GLVQQEPIIFSTTIRENIIY----ARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVL 1208 (1303)
Q Consensus 1133 ~~VpQdp~LF~gTIreNl~~----g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAll 1208 (1303)
+|+||++. ...++.+|..+ ..+..+++++.++++..++.+... + .....||||||||++||||++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~~------~----~~~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLA------L----QPMYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHHh------c----CCccccCHHHHHHHHHHHHHh
Confidence 99999973 23355555321 122345677888888877743211 1 223489999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEEE-EecChHHHh
Q 000751 1209 KNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRIV-EEGTHDSLL 1279 (1303)
Q Consensus 1209 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Iv-e~Gt~~eLl 1279 (1303)
++|++|||||||++||+.+...+.+.+.+. + .|+|+|||++..+.. ||+|++|++|+++ ..|++++..
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 999999999999999999999999998764 3 599999999998864 9999999999998 578887653
No 98
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=1.4e-59 Score=591.13 Aligned_cols=529 Identities=15% Similarity=0.130 Sum_probs=422.3
Q ss_pred HHHHhhhhHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 716 FWRLAELSFAEWL-----YAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANF 790 (1303)
Q Consensus 716 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 790 (1303)
+++++++.++.|. .+++.+++.++...+....+++.+.+++.....+. .........|+++++++.++..+..+
T Consensus 79 ~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~-~~f~~~l~~~~l~~~~~~~~~~~~~~ 157 (659)
T TIGR00954 79 LDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSP-RNFAWILFKWFLIAPPASFINSAIKY 157 (659)
T ss_pred HHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444433 45566666667777778888888888887654321 11111233455556666667777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 791 LQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGM 870 (1303)
Q Consensus 791 ~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~~~ 870 (1303)
+..++...+..++..++|++.+++....++.|||. ++|++.+|+++|++.+.+.+...+..++..++.++++++.++
T Consensus 158 ~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~---~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~ 234 (659)
T TIGR00954 158 LLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS---RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLL 234 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC---CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888999999999999888889999984 579999999999999999999999999999999998888777
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHH
Q 000751 871 L-LEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTK 949 (1303)
Q Consensus 871 ~-~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~ 949 (1303)
. ++|.+++++++.+|+..+......+.+.+..++.++..++.+..+.|.++|+++|++|+.++...+++++..++..+.
T Consensus 235 ~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~ 314 (659)
T TIGR00954 235 TALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEH 314 (659)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 5 999999999999999888888777778888888889999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhHHhh-c----CccCHHHHHHHHHHHH----HHHHHHHHHHhhHHHHH
Q 000751 950 SFLHGMAIGFAFGFSQFLLFA--CNALLLWYTGKSVR-D----GYMDLPTALKEYMVFS----FATFALVEPFGLAPYIL 1018 (1303)
Q Consensus 950 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~-~----g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 1018 (1303)
..+.....+....+..++... .....++.|...+. . |.++++..+..+.... ....++.........+.
T Consensus 315 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~ 394 (659)
T TIGR00954 315 LNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMT 394 (659)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777777766666666542 22222333332222 2 6788887666444432 23445555666677788
Q ss_pred HHHHHHHHHHHHHhcCCCCC------CC--C-CCC-------------CCCCCCcccEEEEeeEEECCCCCCcceeeeee
Q 000751 1019 KRRKSLISVFEIIDRVPKID------PD--D-SSA-------------VKPPNVYGSIELKNVDFCYPSRPEVLVLSNFS 1076 (1303)
Q Consensus 1019 ~~~~~~~~i~~~~~~~~~~~------~~--~-~~~-------------~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~is 1076 (1303)
+...+..|++++++..++.+ +. + ... .......+.|+++||+|+|+++ .++|+|+|
T Consensus 395 ~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~--~~il~~is 472 (659)
T TIGR00954 395 RLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG--DVLIESLS 472 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC--Ceeeecce
Confidence 88999999999887533211 00 0 000 0011134679999999999743 25999999
Q ss_pred EEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCC--
Q 000751 1077 LKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYAR-- 1154 (1303)
Q Consensus 1077 l~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~-- 1154 (1303)
|+|++||++||+||||||||||+++|.|+++|++|+|.+|+ |++++||||+|.+|++|++|||.++.
T Consensus 473 l~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~ 541 (659)
T TIGR00954 473 FEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSS 541 (659)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCCh
Confidence 99999999999999999999999999999999999999874 67899999999999999999999874
Q ss_pred -----CCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHH
Q 000751 1155 -----HNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSR 1229 (1303)
Q Consensus 1155 -----~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~ 1229 (1303)
++.++++++++++.+++++++.+ |.|+||..+ .+.+||||||||++||||++++|++||||||||+||+++++
T Consensus 542 ~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~ 619 (659)
T TIGR00954 542 EDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEG 619 (659)
T ss_pred hhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHH
Confidence 34578899999999999999988 999999986 56799999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeC
Q 000751 1230 VVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNG 1266 (1303)
Q Consensus 1230 ~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~ 1266 (1303)
.+.+.+++. ++|+|+||||+++++.||+|++|+.
T Consensus 620 ~l~~~l~~~---~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 620 YMYRLCREF---GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHHc---CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 999999873 6999999999999999999999973
No 99
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=3.5e-61 Score=593.72 Aligned_cols=194 Identities=21% Similarity=0.303 Sum_probs=163.6
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.++++|++++|++ ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++ .++
T Consensus 340 ~l~~~~ls~~~~~----~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i 402 (590)
T PRK13409 340 LVEYPDLTKKLGD----FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKI 402 (590)
T ss_pred EEEEcceEEEECC----EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeE
Confidence 4899999999953 25999999999999999999999999999999999999999999986 159
Q ss_pred EEEccCCcc-CcccHHHHHHcCCCCCC-HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcC
Q 000751 1133 GLVQQEPII-FSTTIRENIIYARHNAS-EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKN 1210 (1303)
Q Consensus 1133 ~~VpQdp~L-F~gTIreNl~~g~~~~~-~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~ 1210 (1303)
+|+||++.+ ++.|++||+.++..... +....++++..++.+...+ . ...||||||||++|||||+++
T Consensus 403 ~y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~-------~----~~~LSGGe~QRvaiAraL~~~ 471 (590)
T PRK13409 403 SYKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLLDK-------N----VKDLSGGELQRVAIAACLSRD 471 (590)
T ss_pred EEecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHHhC-------C----cccCCHHHHHHHHHHHHHhcC
Confidence 999999875 46799999987532222 3345667777777554332 2 237999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecCh
Q 000751 1211 APILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTH 1275 (1303)
Q Consensus 1211 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~ 1275 (1303)
|+||||||||++||+++...+.+.|+++..+ ++|+|+|||+++.+. .||+|++|++ ++...|+.
T Consensus 472 p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~~ 537 (590)
T PRK13409 472 ADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGHA 537 (590)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeeec
Confidence 9999999999999999999999999987542 689999999999775 5999999964 88777663
No 100
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-60 Score=550.02 Aligned_cols=455 Identities=25% Similarity=0.405 Sum_probs=353.4
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCH-HHHhcc
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKL-EWLRSQ 386 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~~~~ 386 (1303)
-++++|++++|+ ..++|+||||++.+||++|++|.||||||||+|.|+|.|+|++|+|.+||+...-.++ +.....
T Consensus 8 ll~~~~i~K~Fg---gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~G 84 (500)
T COG1129 8 LLELRGISKSFG---GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAG 84 (500)
T ss_pred eeeeecceEEcC---CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCC
Confidence 488999999995 4689999999999999999999999999999999999999999999999999986655 556678
Q ss_pred eEEEecccccc-cHhHHHHHhcCCCC-------CHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHH
Q 000751 387 IGLVTQEPALL-SLSIRDNIAYGRDA-------TLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIA 458 (1303)
Q Consensus 387 i~~v~Q~~~l~-~~ti~~ni~~~~~~-------~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialA 458 (1303)
|+.|+||..|+ +.||.|||.+|+.. +..++++.++.+ +..+ |.+........+||+||||-|+||
T Consensus 85 I~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~-----l~~l--g~~~~~~~~v~~LsiaqrQ~VeIA 157 (500)
T COG1129 85 IATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRAREL-----LARL--GLDIDPDTLVGDLSIAQRQMVEIA 157 (500)
T ss_pred cEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHH-----HHHc--CCCCChhhhhhhCCHHHHHHHHHH
Confidence 99999999998 57999999999743 334444444332 2322 211113334457999999999999
Q ss_pred HhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccCh-HHHhhcC
Q 000751 459 RAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTH-DELLATG 535 (1303)
Q Consensus 459 Ral~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~-~~l~~~~ 535 (1303)
||+..+++|+|||||||+|+....+.+.+.+++++ +|.++|+||||++.+. -||||.||.||+.+..++. .++-
T Consensus 158 rAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~--- 234 (500)
T COG1129 158 RALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETS--- 234 (500)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCC---
Confidence 99999999999999999999988888888888876 7999999999999886 4999999999998854320 0000
Q ss_pred hhHHHHHHHHHhccCCCCCCccCcccccccccccCccCCCCCCCCCCcccCCCCccccccccCCCCCCCCCCCCCCCCCC
Q 000751 536 DLYAELLKCEEAAKLPRRMPVRNYKETSTFQIEKDSSASHSFQEPSSPKMLKSPSLQRVGIYRPTDGAFDSQESPKVLSP 615 (1303)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (1303)
T Consensus 235 -------------------------------------------------------------------------------- 234 (500)
T COG1129 235 -------------------------------------------------------------------------------- 234 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhhhcCCCCCccCCCccccccccccccCCCCCccccccccccCCCCCCCCCCCCCCCCCCCcccccccccccCCCCC
Q 000751 616 PSEKMLENGMPMDAADKEPSIRRQDSFEMRLPELPKIDVHSSNRQTSNGSDPESPISPLLTSDPKNERSHSQTFSRPHSH 695 (1303)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (1303)
T Consensus 235 -------------------------------------------------------------------------------- 234 (500)
T COG1129 235 -------------------------------------------------------------------------------- 234 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcchhhhhhhccCcchHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHH
Q 000751 696 SDDFPTKVREEESKHQKAPSFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWC 775 (1303)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 775 (1303)
.+ .+ +..+
T Consensus 235 -------~~-------------~l-----------------------------------v~~M----------------- 242 (500)
T COG1129 235 -------ED-------------EL-----------------------------------VRLM----------------- 242 (500)
T ss_pred -------HH-------------HH-----------------------------------HHHh-----------------
Confidence 00 00 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHH
Q 000751 776 LIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIF 855 (1303)
Q Consensus 776 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~ 855 (1303)
.|+
T Consensus 243 ------------------------------------------------------vGr----------------------- 245 (500)
T COG1129 243 ------------------------------------------------------VGR----------------------- 245 (500)
T ss_pred ------------------------------------------------------hCc-----------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHH
Q 000751 856 IQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKV 935 (1303)
Q Consensus 856 i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~ 935 (1303)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHH
Q 000751 936 MELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAP 1015 (1303)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1303)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCCh
Q 000751 1016 YILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGK 1095 (1303)
Q Consensus 1016 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGK 1095 (1303)
++.+..+. .... . ...-.++++|++..- .++|+||++++||.+||.|--|||+
T Consensus 246 -------------~~~~~~~~-~~~~--~----~~~~~l~v~~l~~~~-------~~~dvSf~vr~GEIlGiaGLvGaGR 298 (500)
T COG1129 246 -------------ELEDLFPE-PPEE--G----IGEPVLEVRNLSGGG-------KVRDVSFTVRAGEILGIAGLVGAGR 298 (500)
T ss_pred -------------chhhhccc-cccc--C----CCCcEEEEecCCCCC-------ceeCceeEEeCCcEEEEeccccCCH
Confidence 00000010 0000 0 001136677776421 5889999999999999999999999
Q ss_pred HHHHHHHhccccCCccEEEECCeeCCCCCH-HHhhcceEEEccCC----ccCcccHHHHHHcCCC-CCCHH-HHHHHHHH
Q 000751 1096 STIISLIERFYDPVAGQVLLDGRDLKLYNL-RWLRNHLGLVQQEP----IIFSTTIRENIIYARH-NASEA-EVKEAARI 1168 (1303)
Q Consensus 1096 STL~~lL~rl~~~~~G~I~idG~di~~~~~-~~lR~~i~~VpQdp----~LF~gTIreNl~~g~~-~~~~~-ei~~al~~ 1168 (1303)
|-++++|+|..++.+|+|.+||.++.--++ +..+.-|+|||-|- .+...+|++|+.+..- ..+.. -+...-+.
T Consensus 299 TEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~ 378 (500)
T COG1129 299 TELARALFGARPASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKER 378 (500)
T ss_pred HHHHHHHhCCCcCCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHH
Confidence 999999999999999999999998887765 58888999999875 3556799999987621 11101 24445555
Q ss_pred hchHHHHHhC---CCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEE
Q 000751 1169 ANAHHFISSL---PHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTT 1245 (1303)
Q Consensus 1169 a~l~~~I~~l---p~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~Tv 1245 (1303)
....+++..| ..+.+.+++ +||||.+|+++|||+|..+|+||||||||.++|..+.+.|.+.|+++..+|++|
T Consensus 379 ~~~~~~~~~l~Ik~~s~~~~v~----~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ai 454 (500)
T COG1129 379 ALAERYIRRLRIKTPSPEQPIG----TLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAI 454 (500)
T ss_pred HHHHHHHHhcCcccCCccchhh----cCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEE
Confidence 5666777776 234455555 899999999999999999999999999999999999999999999998889999
Q ss_pred EEEecCchhH-hhcCEEEEEeCCEEEEecCh
Q 000751 1246 ILIAHRAAMM-RHVDNIVVLNGGRIVEEGTH 1275 (1303)
Q Consensus 1246 I~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~ 1275 (1303)
|+||-.+..+ ..||||+||.+|+|+..=+.
T Consensus 455 l~iSSElpEll~~~DRIlVm~~Gri~~e~~~ 485 (500)
T COG1129 455 LMISSELPELLGLSDRILVMREGRIVGELDR 485 (500)
T ss_pred EEEeCChHHHHhhCCEEEEEECCEEEEEecc
Confidence 9999999765 58999999999999874333
No 101
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.6e-58 Score=553.00 Aligned_cols=204 Identities=25% Similarity=0.414 Sum_probs=175.8
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcc
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNH 1131 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~ 1131 (1303)
-.++++|++++|++. .++++++||.|++|++||||||||+|||||+++|.|...|.+|+|.+.-. -+
T Consensus 320 ~vl~~~~~~~~y~~~--~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~~-----------v~ 386 (530)
T COG0488 320 LVLEFENVSKGYDGG--RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGET-----------VK 386 (530)
T ss_pred eeEEEeccccccCCC--ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCCc-----------eE
Confidence 358999999999754 36999999999999999999999999999999999999999999998742 26
Q ss_pred eEEEccCC-ccC-cccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhc
Q 000751 1132 LGLVQQEP-IIF-STTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLK 1209 (1303)
Q Consensus 1132 i~~VpQdp-~LF-~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr 1209 (1303)
+||.+|+- .++ +.|+-|++.-..|+..+.++...|...++... ...++|+ .||||||-|+.||+.++.
T Consensus 387 igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~------~~~~~v~----~LSGGEk~Rl~La~ll~~ 456 (530)
T COG0488 387 IGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGE------DQEKPVG----VLSGGEKARLLLAKLLLQ 456 (530)
T ss_pred EEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChH------HHhCchh----hcCHhHHHHHHHHHHhcc
Confidence 99999998 444 34999999877665557888888888776432 2344554 799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEEEEe-cChHHHhhcC
Q 000751 1210 NAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRIVEE-GTHDSLLAKN 1282 (1303)
Q Consensus 1210 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~-Gt~~eLl~~~ 1282 (1303)
+|.+|||||||.+||.+|-..+.++|.+. ..|||+|||+...+.. |++|+++++ ++.++ |+|++..+..
T Consensus 457 ~pNvLiLDEPTNhLDi~s~~aLe~aL~~f---~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~~ 527 (530)
T COG0488 457 PPNLLLLDEPTNHLDIESLEALEEALLDF---EGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLEQK 527 (530)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHhC---CCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHHhh
Confidence 99999999999999999999999999985 3699999999999875 899999999 88777 8998887654
No 102
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.6e-57 Score=514.05 Aligned_cols=462 Identities=23% Similarity=0.385 Sum_probs=357.6
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCC-CCHHHHhcc
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKN-LKLEWLRSQ 386 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~-~~~~~~~~~ 386 (1303)
.++++++++.|| ...+++||||++++||+.||.|+||+|||||+++|.|+|+|++|+|.+||+.++- -+.+..|..
T Consensus 4 ~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~G 80 (501)
T COG3845 4 ALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLG 80 (501)
T ss_pred eEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcC
Confidence 589999999996 4679999999999999999999999999999999999999999999999999984 456778999
Q ss_pred eEEEeccccccc-HhHHHHHhcCCCCCHH-HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccC
Q 000751 387 IGLVTQEPALLS-LSIRDNIAYGRDATLD-QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLN 464 (1303)
Q Consensus 387 i~~v~Q~~~l~~-~ti~~ni~~~~~~~~~-~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~ 464 (1303)
||+|+|++.|+. -||.|||.+|.+...- .+........+.+..+++ |++-...+....||-|||||+.|-+|||++
T Consensus 81 IGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~y--Gl~vdp~~~V~dLsVG~qQRVEIlKaLyr~ 158 (501)
T COG3845 81 IGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERY--GLPVDPDAKVADLSVGEQQRVEILKALYRG 158 (501)
T ss_pred CcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHh--CCCCCccceeecCCcchhHHHHHHHHHhcC
Confidence 999999999995 7999999999743210 111111111122222222 445555566678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHhhcChhHHHHH
Q 000751 465 PSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELLATGDLYAELL 542 (1303)
Q Consensus 465 ~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 542 (1303)
|++||||||||-|-|.-...+.+.++.+. .|+|+|+|||++..+.. ||++-||.+|+++..-. ..
T Consensus 159 a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~--~~----------- 225 (501)
T COG3845 159 ARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVD--PV----------- 225 (501)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeec--CC-----------
Confidence 99999999999999988888888888875 69999999999999875 99999999999864210 00
Q ss_pred HHHHhccCCCCCCccCcccccccccccCccCCCCCCCCCCcccCCCCccccccccCCCCCCCCCCCCCCCCCCchhhhhh
Q 000751 543 KCEEAAKLPRRMPVRNYKETSTFQIEKDSSASHSFQEPSSPKMLKSPSLQRVGIYRPTDGAFDSQESPKVLSPPSEKMLE 622 (1303)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (1303)
. .
T Consensus 226 ------------------------------------------------------------------~-----~------- 227 (501)
T COG3845 226 ------------------------------------------------------------------A-----E------- 227 (501)
T ss_pred ------------------------------------------------------------------C-----C-------
Confidence 0 0
Q ss_pred cCCCCCccCCCccccccccccccCCCCCccccccccccCCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCcc
Q 000751 623 NGMPMDAADKEPSIRRQDSFEMRLPELPKIDVHSSNRQTSNGSDPESPISPLLTSDPKNERSHSQTFSRPHSHSDDFPTK 702 (1303)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (1303)
T Consensus 228 -------------------------------------------------------------------------------- 227 (501)
T COG3845 228 -------------------------------------------------------------------------------- 227 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhccCcchHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHH
Q 000751 703 VREEESKHQKAPSFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMG 782 (1303)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 782 (1303)
T Consensus 228 -------------------------------------------------------------------------------- 227 (501)
T COG3845 228 -------------------------------------------------------------------------------- 227 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 000751 783 VVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAV 862 (1303)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~i~~~~~~ 862 (1303)
.+..++. +
T Consensus 228 ---------------------------------------------~t~~ela-~-------------------------- 235 (501)
T COG3845 228 ---------------------------------------------TTEEELA-E-------------------------- 235 (501)
T ss_pred ---------------------------------------------CCHHHHH-H--------------------------
Confidence 0000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHH
Q 000751 863 IVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQ 942 (1303)
Q Consensus 863 i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~~~~~~~~~~ 942 (1303)
T Consensus 236 -------------------------------------------------------------------------------- 235 (501)
T COG3845 236 -------------------------------------------------------------------------------- 235 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q 000751 943 LKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRK 1022 (1303)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1022 (1303)
+.....+.
T Consensus 236 ---------------------------------------lMvG~~v~--------------------------------- 243 (501)
T COG3845 236 ---------------------------------------LMVGREVV--------------------------------- 243 (501)
T ss_pred ---------------------------------------HhcCCccc---------------------------------
Confidence 00000000
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHH
Q 000751 1023 SLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLI 1102 (1303)
Q Consensus 1023 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL 1102 (1303)
...+. .+. .+ ..-.++++|++..-+. ..+.+++|||++++||.+||.|-.|-|-+-|+.+|
T Consensus 244 ---------~~~~~-~~~-----~p--g~~vL~V~~L~v~~~~--~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eai 304 (501)
T COG3845 244 ---------LRVVK-PPS-----TP--GEVVLEVEDLSVKDRR--GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAI 304 (501)
T ss_pred ---------ccccc-CCC-----CC--CCeEEEEeeeEeecCC--CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHH
Confidence 00000 000 00 1125789999986532 23589999999999999999999999999999999
Q ss_pred hccccCCccEEEECCeeC-CCCCHHHhhc-ceEEEccCCc----cCcccHHHHHHcCCCC---------CCHHHHHHHHH
Q 000751 1103 ERFYDPVAGQVLLDGRDL-KLYNLRWLRN-HLGLVQQEPI----IFSTTIRENIIYARHN---------ASEAEVKEAAR 1167 (1303)
Q Consensus 1103 ~rl~~~~~G~I~idG~di-~~~~~~~lR~-~i~~VpQdp~----LF~gTIreNl~~g~~~---------~~~~ei~~al~ 1167 (1303)
.|+.+|.+|+|+++|.|+ ...+...+|+ .++|||.|.+ ..+-|+.||+.++..+ .+..++.+.++
T Consensus 305 sGlr~~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~ 384 (501)
T COG3845 305 SGLRKPASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFAR 384 (501)
T ss_pred hCCCccCCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHH
Confidence 999999999999999997 6778777665 5999999984 6678999999876432 12234433332
Q ss_pred HhchHHHHHhC---CCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcE
Q 000751 1168 IANAHHFISSL---PHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKT 1244 (1303)
Q Consensus 1168 ~a~l~~~I~~l---p~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~T 1244 (1303)
+.++.+ +.+.++++. +||||+.||+-+||-|.++|++||..+||.+||..+.+.|++.|.+....|+.
T Consensus 385 -----~li~~fdVr~~~~~~~a~----~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~A 455 (501)
T COG3845 385 -----ELIEEFDVRAPSPDAPAR----SLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKA 455 (501)
T ss_pred -----HHHHHcCccCCCCCcchh----hcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCE
Confidence 333332 445566554 89999999999999999999999999999999999999999999998888899
Q ss_pred EEEEecCchhH-hhcCEEEEEeCCEEEEecChHH
Q 000751 1245 TILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1245 vI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
|++|+-.|+.+ .-||||.||.+|+|+...++++
T Consensus 456 VLLiS~dLDEil~lsDrIaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 456 VLLISEDLDEILELSDRIAVIYEGRIVGIVPPEE 489 (501)
T ss_pred EEEEehhHHHHHHhhheeeeeeCCceeccccccc
Confidence 99999999865 5699999999999998877765
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.6e-52 Score=468.52 Aligned_cols=238 Identities=28% Similarity=0.428 Sum_probs=223.3
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcc
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNH 1131 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~ 1131 (1303)
|.|+|+||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|+|+++ .+|+|++||.++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~~-~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEGG-NAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCCC-CcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 5799999999997432 359999999999999999999999999999999999998 78999999999999999999999
Q ss_pred eEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCC
Q 000751 1132 LGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNA 1211 (1303)
Q Consensus 1132 i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p 1211 (1303)
|+||||+|.+|++|+++|+++..+ .++++++++++.+++.+++.++|+|++|.++++|.+||||||||+|||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYGK-WSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhccC-CCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999985443 5788999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcCchhHHHHhh
Q 000751 1212 PILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQP 1291 (1303)
Q Consensus 1212 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~g~y~~l~~~ 1291 (1303)
+||||||||++||+.+++.+++.|++.+. ++|+|+||||++++..||||+||++|+|++.|+|++|++.++.|++++..
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~-~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~ 236 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFA-DCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISP 236 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcC-CCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhh
Confidence 99999999999999999999999998754 69999999999999999999999999999999999999988888888865
Q ss_pred hh
Q 000751 1292 HY 1293 (1303)
Q Consensus 1292 ~~ 1293 (1303)
..
T Consensus 237 ~~ 238 (275)
T cd03289 237 SD 238 (275)
T ss_pred cc
Confidence 54
No 104
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.4e-50 Score=407.97 Aligned_cols=216 Identities=29% Similarity=0.497 Sum_probs=193.6
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCC-CCCHHHhhcc
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLK-LYNLRWLRNH 1131 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~-~~~~~~lR~~ 1131 (1303)
-|+++||+.+|.+. .||+|||++|++||.++|+||||||||||+++|.++-+|++|+|.|||.++. ..+...+|++
T Consensus 2 mi~i~~l~K~fg~~---~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFGDK---EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeCCe---EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 48999999999643 4999999999999999999999999999999999999999999999998774 3388999999
Q ss_pred eEEEccCCccCc-ccHHHHHHcCCC---CCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHH
Q 000751 1132 LGLVQQEPIIFS-TTIRENIIYARH---NASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAI 1203 (1303)
Q Consensus 1132 i~~VpQdp~LF~-gTIreNl~~g~~---~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaL 1203 (1303)
+|+|+|+..||+ -|+.||+.++.- ..+. +.-.+.|+++|+.|-....|. +|||||+||+||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~-----------qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPA-----------QLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCcc-----------ccCcHHHHHHHH
Confidence 999999999997 599999987631 1222 233556788888888777774 899999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1204 ARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1204 ARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
||||..+|+|+|+|||||||||+.-..|.+.++++..+|.|.|+|||.+...++ ||||+.||+|+|+|+|+|+++..+.
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 999999999999999999999999999999999998888999999999998876 8999999999999999999999763
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.6e-50 Score=405.82 Aligned_cols=214 Identities=27% Similarity=0.454 Sum_probs=189.3
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecC-CCCHHHHhcc
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIK-NLKLEWLRSQ 386 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~-~~~~~~~~~~ 386 (1303)
-|+++|++++|. +..||+|||++|++||.++|+||||||||||+++|+|+-+|++|+|.+||.++. ..+...+|++
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 389999999994 567999999999999999999999999999999999999999999999998774 3378899999
Q ss_pred eEEEecccccc-cHhHHHHHhcCC----CCCHHH----HHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHH
Q 000751 387 IGLVTQEPALL-SLSIRDNIAYGR----DATLDQ----IEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSI 457 (1303)
Q Consensus 387 i~~v~Q~~~l~-~~ti~~ni~~~~----~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrial 457 (1303)
+|+|+|+..|| +.|+.||+.++. ..+.++ -.+.+++.++.+-....| .+||||||||+||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHHHHH
Confidence 99999999999 589999999884 333333 233445666666665555 4799999999999
Q ss_pred HHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHhhcC
Q 000751 458 ARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELLATG 535 (1303)
Q Consensus 458 ARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 535 (1303)
||||.-+|+++++|||||||||+....+.+.++++. .|.|.|+|||.+.+.+. ||||+.||+|+|+++|+++++..+.
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 999999999999999999999999999999998875 68999999999999986 9999999999999999999998764
No 106
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=5.3e-49 Score=441.77 Aligned_cols=237 Identities=21% Similarity=0.341 Sum_probs=222.5
Q ss_pred ccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcc
Q 000751 307 GNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQ 386 (1303)
Q Consensus 307 ~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 386 (1303)
+.|+|+|++|+|+. ++.++|+|+||+|++||+++|+|+||||||||+++|.|+++ ++|+|.+||.++..++...+|+.
T Consensus 1 g~i~~~nls~~~~~-~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTE-GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCC-CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 36899999999963 24579999999999999999999999999999999999998 78999999999999999999999
Q ss_pred eEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCC
Q 000751 387 IGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPS 466 (1303)
Q Consensus 387 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ 466 (1303)
|+||||+|.+|++|+++|+.+....++++++++++.+++.+++..+|+|++|.++++|.+||||||||++||||++++|+
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~ 158 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAK 158 (275)
T ss_pred EEEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999997544567889999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhcChhHHHHHHHH
Q 000751 467 ILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLATGDLYAELLKCE 545 (1303)
Q Consensus 467 ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 545 (1303)
||||||||++||+++.+.+++.|++..+++|+|+||||++.+..||+|++|++|++++.|+++++++..+.|++++...
T Consensus 159 illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 237 (275)
T cd03289 159 ILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISPS 237 (275)
T ss_pred EEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhhc
Confidence 9999999999999999999999998878999999999999998999999999999999999999999888888877643
No 107
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-48 Score=414.22 Aligned_cols=226 Identities=33% Similarity=0.541 Sum_probs=194.2
Q ss_pred EEEEeeEEECCCC--CCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCH---HHh
Q 000751 1054 IELKNVDFCYPSR--PEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNL---RWL 1128 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~--~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~---~~l 1128 (1303)
|+|+||++.|+.. +...+|+||||+|++||+.||+|+||+|||||++++.++-.|++|+|.+||.|+..++. ..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999862 23469999999999999999999999999999999999999999999999998887765 566
Q ss_pred hcceEEEccCCccCc-ccHHHHHHcCCC--CCCHH----HHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHH
Q 000751 1129 RNHLGLVQQEPIIFS-TTIRENIIYARH--NASEA----EVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRI 1201 (1303)
Q Consensus 1129 R~~i~~VpQdp~LF~-gTIreNl~~g~~--~~~~~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1201 (1303)
|++|++|+|++.|++ .|+.+|+.|+.. ..+.+ .+.+.|+.+|+.|.-.+-| .+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhHH
Confidence 889999999999998 799999998743 22333 4556777777776655554 48999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHHHh
Q 000751 1202 AIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDSLL 1279 (1303)
Q Consensus 1202 aLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~eLl 1279 (1303)
+|||||..+|+|||.|||||||||+|-+.|.+.|++.-++ |-|+++|||.++.+++ ||||.||++|+|+|+|+..++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 9999999999999999999999999999999999875332 6899999999999976 9999999999999999999998
Q ss_pred hcC--chhHHHHh
Q 000751 1280 AKN--GLYVRLMQ 1290 (1303)
Q Consensus 1280 ~~~--g~y~~l~~ 1290 (1303)
.+. ..-.++..
T Consensus 231 ~~Pk~~~t~~fi~ 243 (339)
T COG1135 231 ANPKHAITQEFIG 243 (339)
T ss_pred cCcchHHHHHHHH
Confidence 763 33444443
No 108
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-47 Score=441.15 Aligned_cols=224 Identities=25% Similarity=0.428 Sum_probs=198.2
Q ss_pred CcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEECCeeCC--C
Q 000751 1050 VYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD-----PVAGQVLLDGRDLK--L 1122 (1303)
Q Consensus 1050 ~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~--~ 1122 (1303)
..+.|+|+||+++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++ |.+|+|.|||+|+. .
T Consensus 77 ~~~~i~~~nls~~y~~~~-~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~ 155 (329)
T PRK14257 77 HANVFEIRNFNFWYMNRT-KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKK 155 (329)
T ss_pred cCceEEEEeeEEEecCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 347899999999997432 369999999999999999999999999999999999997 57999999999997 4
Q ss_pred CCHHHhhcceEEEccCCccCcccHHHHHHcCCC--CCCHHH-----HHHHHHHhchHHHHHhCCCCcccccCCCCCCCCh
Q 000751 1123 YNLRWLRNHLGLVQQEPIIFSTTIRENIIYARH--NASEAE-----VKEAARIANAHHFISSLPHGYDTHVGMRGVDLTP 1195 (1303)
Q Consensus 1123 ~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~~~~e-----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1195 (1303)
++...+|++++||||+|++|++||+|||.++.. ..++++ +.++++.+++ ++++++.++++|.+|||
T Consensus 156 ~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L-------~~~l~~~~~~~~~~LSg 228 (329)
T PRK14257 156 ISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAAL-------WDEVKDDLDKAGNALSG 228 (329)
T ss_pred cchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCC-------cchhhhhhhCCcccCCH
Confidence 566789999999999999999999999997632 234444 3455666665 34567889999999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEEEEecC
Q 000751 1196 GQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1196 GQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt 1274 (1303)
|||||+|||||++++|+|||||||||+||+++.+.+++.|++..+ ++|+|+|||+++++.. ||||+||++|+|+|.|+
T Consensus 229 GqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~ 307 (329)
T PRK14257 229 GQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGE 307 (329)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999998866 5999999999999987 99999999999999999
Q ss_pred hHHHhhcC
Q 000751 1275 HDSLLAKN 1282 (1303)
Q Consensus 1275 ~~eLl~~~ 1282 (1303)
++++....
T Consensus 308 ~~~l~~~~ 315 (329)
T PRK14257 308 TKTIFIHP 315 (329)
T ss_pred HHHHhcCC
Confidence 99998753
No 109
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-48 Score=392.06 Aligned_cols=218 Identities=32% Similarity=0.509 Sum_probs=198.8
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCC-----cEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTL-----GEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~-----G~i~~~g~~~~~--~~~ 380 (1303)
.++++|+++.|. ++.+|+|||+.|++++++|++||||||||||++++.|+.+... |+|.++|+|+.+ ++.
T Consensus 7 ~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 7 AIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred eeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 589999999994 5679999999999999999999999999999999999998875 999999999975 689
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCC---C----CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGR---D----ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKI 453 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkq 453 (1303)
..+|++||+|+|.|--|..||+||++||. . .-++.++++++.|+|++.+.. .+.+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHHH
Confidence 99999999999999999999999999993 1 224568889999999987753 245678889999999
Q ss_pred HHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHh
Q 000751 454 KLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELL 532 (1303)
Q Consensus 454 rialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 532 (1303)
|+||||||.-+|+||+||||||||||.+..+|.+.|.+++++-|+|+|||.+....+ +|+..++-.|+++|.|+.+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999999999999999988755 9999999999999999999987
Q ss_pred hcC
Q 000751 533 ATG 535 (1303)
Q Consensus 533 ~~~ 535 (1303)
.+.
T Consensus 237 ~~P 239 (253)
T COG1117 237 TNP 239 (253)
T ss_pred cCc
Confidence 653
No 110
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-48 Score=400.17 Aligned_cols=213 Identities=32% Similarity=0.513 Sum_probs=192.5
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
|+|+|||++|. +..+++|+||+|++||+++++|||||||||++++|.|+++|++|+|++||.++++++...+|++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 79999999994 568999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecccccc-cHhHHHHHhcCC---CCCHH----HHHHHHHHhcch--HHHHhcccccCccccCCCCCCChHHHHHHHHH
Q 000751 389 LVTQEPALL-SLSIRDNIAYGR---DATLD----QIEEAAKIAHAH--TFISSLEKGYETQVGRAGLALTEEQKIKLSIA 458 (1303)
Q Consensus 389 ~v~Q~~~l~-~~ti~~ni~~~~---~~~~~----~~~~~~~~~~~~--~~i~~l~~g~~t~vg~~g~~LSgGqkqrialA 458 (1303)
||-|..-|| +.||.|||++-. ..+++ ++.+.++..+++ +|..+.| ..|||||+|||.+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv~ 147 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGVA 147 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHHH
Confidence 999999999 589999999753 34444 455666677775 3555555 47999999999999
Q ss_pred HhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcc-ccccCEEEEEeCceEeeccChHHHhhcC
Q 000751 459 RAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSL-IRNADYIAVMDEGRLFEMGTHDELLATG 535 (1303)
Q Consensus 459 Ral~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~-~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 535 (1303)
|||..+|+|++||||++||||.++..+++-+.++.+ ++|+|+|||+++. ++.+|||.+|++|+|+..+++++++++.
T Consensus 148 RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 148 RALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred HHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999877653 8999999999987 4679999999999999999999999875
No 111
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-47 Score=384.10 Aligned_cols=219 Identities=26% Similarity=0.461 Sum_probs=196.5
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCc-----cEEEECCeeCCC--CC
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVA-----GQVLLDGRDLKL--YN 1124 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~-----G~I~idG~di~~--~~ 1124 (1303)
..++++|+++.|.+. .+|+|||++|++++.+|++|||||||||+++.|.|+.+... |+|.+||.||-+ ++
T Consensus 6 ~~~~~~~l~~yYg~~---~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYGDK---HALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEECch---hhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 358999999999743 49999999999999999999999999999999999999876 999999999976 57
Q ss_pred HHHhhcceEEEccCCccCcccHHHHHHcCCCC------CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1125 LRWLRNHLGLVQQEPIIFSTTIRENIIYARHN------ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1125 ~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~------~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
.-.||+++|+|+|.|.-|+.||+||+.||..- .-|+-++++|+.|.|||.+.. . +.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD---r----L~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD---R----LHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH---H----hhCCccCCChhHH
Confidence 89999999999999999999999999998421 124557889999999998853 2 3445678999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCch-hHhhcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAA-MMRHVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~-ti~~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
|||||||||.-+|+|||||||||||||-+-..|.+.|.++.+ +.|+|+|||.+. ..+-+|+...|..|+++|+|+-++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~-~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~ 234 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK-KYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDK 234 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh-ccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHh
Confidence 999999999999999999999999999999999999999864 699999999997 566799999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+..+
T Consensus 235 iF~~ 238 (253)
T COG1117 235 IFTN 238 (253)
T ss_pred hhcC
Confidence 8865
No 112
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-47 Score=406.99 Aligned_cols=216 Identities=31% Similarity=0.493 Sum_probs=188.6
Q ss_pred EEEEEEEEEcCCC--CCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHH---H
Q 000751 309 IEFRNVYFSYLSR--PEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW---L 383 (1303)
Q Consensus 309 i~~~~v~f~y~~~--~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~ 383 (1303)
|++++||+.|+.. +...+|+||||+|++||+.+|+|+||+|||||++++.++-.|++|+|.+||+|+..++... +
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7999999999742 1346999999999999999999999999999999999999999999999999998877554 5
Q ss_pred hcceEEEeccccccc-HhHHHHHhcCC---CCCHH----HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHH
Q 000751 384 RSQIGLVTQEPALLS-LSIRDNIAYGR---DATLD----QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKL 455 (1303)
Q Consensus 384 ~~~i~~v~Q~~~l~~-~ti~~ni~~~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqri 455 (1303)
|++||+++|++.|++ .||.+|++|.. ..+.+ ++.+.++..++.|... ....+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~-----------~yP~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKAD-----------RYPAQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhc-----------cCchhcCcchhhHH
Confidence 679999999999997 89999999974 33333 3445555555555544 44568999999999
Q ss_pred HHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHh
Q 000751 456 SIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELL 532 (1303)
Q Consensus 456 alARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 532 (1303)
+|||||..+|+||+.|||||||||+|.+.|.+.|++.. -|-|+++|||.++.++. |||+.||++|+++|+|+..++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999998764 48999999999999987 9999999999999999999998
Q ss_pred hcC
Q 000751 533 ATG 535 (1303)
Q Consensus 533 ~~~ 535 (1303)
.++
T Consensus 231 ~~P 233 (339)
T COG1135 231 ANP 233 (339)
T ss_pred cCc
Confidence 764
No 113
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-46 Score=388.77 Aligned_cols=220 Identities=30% Similarity=0.533 Sum_probs=194.0
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+|+|||++|.+. .+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++...||++||
T Consensus 2 I~~~nvsk~y~~~---~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYGNK---KAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcCCc---eeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 7999999999743 5999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCccCc-ccHHHHHHcCC--CCCC----HHHHHHHHHHhchH--HHHHhCCCCcccccCCCCCCCChHHHHHHHHH
Q 000751 1134 LVQQEPIIFS-TTIRENIIYAR--HNAS----EAEVKEAARIANAH--HFISSLPHGYDTHVGMRGVDLTPGQKQRIAIA 1204 (1303)
Q Consensus 1134 ~VpQdp~LF~-gTIreNl~~g~--~~~~----~~ei~~al~~a~l~--~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLA 1204 (1303)
||-|.--||+ .||.|||.+-. ..-+ ++++.+.++.++|. +|..+.|. .|||||+||+.+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~-----------eLSGGQQQRVGv~ 147 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPH-----------ELSGGQQQRVGVA 147 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCch-----------hcCcchhhHHHHH
Confidence 9999999997 59999997531 1123 34566777778875 46666664 7999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCch-hHhhcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1205 RVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAA-MMRHVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1205 RAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~-ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
|||..+|+|||+|||.+|||+-+...+|+-+.+..++ ++|+|+|||+++ .++-+|||+||++|+|+.+|+|++++++.
T Consensus 148 RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 148 RALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred HHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 9999999999999999999999999999998865433 699999999997 57889999999999999999999999873
Q ss_pred -chhHH
Q 000751 1283 -GLYVR 1287 (1303)
Q Consensus 1283 -g~y~~ 1287 (1303)
..|-+
T Consensus 228 an~FV~ 233 (309)
T COG1125 228 ANDFVE 233 (309)
T ss_pred cHHHHH
Confidence 34433
No 114
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.2e-45 Score=411.00 Aligned_cols=235 Identities=47% Similarity=0.794 Sum_probs=218.3
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPDG-PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCCC-ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 57999999996432 35999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000751 1134 LVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPI 1213 (1303)
Q Consensus 1134 ~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~I 1213 (1303)
|+||++.+|+.|++|||.++.+..+.+++.++++..++.+++..+|.|+++.....+.+||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999986554556678888888999999999999999998888999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcCchhHHHHh
Q 000751 1214 LLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQ 1290 (1303)
Q Consensus 1214 LlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~g~y~~l~~ 1290 (1303)
|||||||++||+.+...+.+.|++... ++|+|++||+++.+..||+|++|++|++++.|++++++++.+.|+.++.
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~~~ 235 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICA-GRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAYLYQ 235 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHHHHh
Confidence 999999999999999999999998754 6999999999999988999999999999999999999998899988775
No 115
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=3.4e-45 Score=414.18 Aligned_cols=199 Identities=23% Similarity=0.392 Sum_probs=166.5
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|.++||+|.|++.+ ..++++||-|.++++||+|||+|+|||||++++.+...|..|.|.-.-.. ++
T Consensus 389 vi~~~nv~F~y~~~~--~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~-----------~~ 455 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP--MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHN-----------KL 455 (614)
T ss_pred eEEEeccccCCCCcc--hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccc-----------cc
Confidence 589999999998665 68999999999999999999999999999999999999999998765432 34
Q ss_pred EEEcc---CCccCcccHHHHHHcCCCC-CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHh
Q 000751 1133 GLVQQ---EPIIFSTTIRENIIYARHN-ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVL 1208 (1303)
Q Consensus 1133 ~~VpQ---dp~LF~gTIreNl~~g~~~-~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAll 1208 (1303)
++-.| +-.-++.|.-|++..-.++ -+.+++...+..+|+..... +.+++ +||+|||.|++.||.++
T Consensus 456 ~~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q------~~p~~----~LS~Gqr~rVlFa~l~~ 525 (614)
T KOG0927|consen 456 PRYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQ------VVPMS----QLSDGQRRRVLFARLAV 525 (614)
T ss_pred hhhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCcccc------ccchh----hcccccchhHHHHHHHh
Confidence 44444 3345677888998765553 56788899999999864433 33343 89999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEEEE-ecChHH
Q 000751 1209 KNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRIVE-EGTHDS 1277 (1303)
Q Consensus 1209 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive-~Gt~~e 1277 (1303)
++|.||||||||++||.++-..+.++|.+. ..+||+|+|+...|.+ +++|.+.++|.+.. .|++..
T Consensus 526 kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~~ 593 (614)
T KOG0927|consen 526 KQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIEI 593 (614)
T ss_pred cCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhHHHHHHHHhHhhccCceeecCccHHH
Confidence 999999999999999999999999999885 4699999999998865 89999999998865 455543
No 116
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-46 Score=427.40 Aligned_cols=223 Identities=29% Similarity=0.439 Sum_probs=197.5
Q ss_pred CCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC-----CCCcEEEECCeecC--C
Q 000751 305 VHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD-----PTLGEVLLDGENIK--N 377 (1303)
Q Consensus 305 ~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~--~ 377 (1303)
..+.|+|+|++|+|++ +..++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.+||+++. .
T Consensus 77 ~~~~i~~~nls~~y~~-~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~ 155 (329)
T PRK14257 77 HANVFEIRNFNFWYMN-RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKK 155 (329)
T ss_pred cCceEEEEeeEEEecC-CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 3457999999999963 23579999999999999999999999999999999999997 57999999999997 3
Q ss_pred CCHHHHhcceEEEecccccccHhHHHHHhcCC---CCCHHH-----HHHHHHHhcchHHHHhcccccCccccCCCCCCCh
Q 000751 378 LKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR---DATLDQ-----IEEAAKIAHAHTFISSLEKGYETQVGRAGLALTE 449 (1303)
Q Consensus 378 ~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~~~~~-----~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSg 449 (1303)
.+...+|+.++||||+|++|++|++|||.|+. ..++++ +.++++.|+++ +++++.++++|.+|||
T Consensus 156 ~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~-------~~l~~~~~~~~~~LSg 228 (329)
T PRK14257 156 ISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALW-------DEVKDDLDKAGNALSG 228 (329)
T ss_pred cchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCc-------chhhhhhhCCcccCCH
Confidence 45677899999999999999999999999874 233332 45566666654 3456788999999999
Q ss_pred HHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccc-cCEEEEEeCceEeeccCh
Q 000751 450 EQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTH 528 (1303)
Q Consensus 450 GqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~ 528 (1303)
|||||++||||++++|+|||||||||+||+++...+.+.|+++.+++|+|+|||+++++.. ||+|++|++|+|++.|++
T Consensus 229 GqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~ 308 (329)
T PRK14257 229 GQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGET 308 (329)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998889999999999999887 999999999999999999
Q ss_pred HHHhhcC
Q 000751 529 DELLATG 535 (1303)
Q Consensus 529 ~~l~~~~ 535 (1303)
+++....
T Consensus 309 ~~l~~~~ 315 (329)
T PRK14257 309 KTIFIHP 315 (329)
T ss_pred HHHhcCC
Confidence 9997643
No 117
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=7.2e-45 Score=408.58 Aligned_cols=240 Identities=31% Similarity=0.515 Sum_probs=221.1
Q ss_pred CcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhh
Q 000751 1050 VYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLR 1129 (1303)
Q Consensus 1050 ~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR 1129 (1303)
..|.|+++|++++|++. ..++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|
T Consensus 16 ~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 16 LGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 45789999999999753 23599999999999999999999999999999999999999999999999999999988999
Q ss_pred cceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhc
Q 000751 1130 NHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLK 1209 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr 1209 (1303)
++++||+|+|.+|++|++||+.+... ..+++++++++.+++.+++..+|.|+++.+++.+.+||||||||++||||+++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 173 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVR 173 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999986532 34667888999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhc-CchhHHH
Q 000751 1210 NAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAK-NGLYVRL 1288 (1303)
Q Consensus 1210 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~-~g~y~~l 1288 (1303)
+|++|||||||++||+++...+.+.+++... ++|+|++||+++.+..||+|++|++|++++.|+++++++. ++.|+++
T Consensus 174 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~ 252 (257)
T cd03288 174 KSSILIMDEATASIDMATENILQKVVMTAFA-DRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASL 252 (257)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhcC-CCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHH
Confidence 9999999999999999999999999998644 6999999999999999999999999999999999999976 5678888
Q ss_pred Hhhh
Q 000751 1289 MQPH 1292 (1303)
Q Consensus 1289 ~~~~ 1292 (1303)
+..+
T Consensus 253 ~~~~ 256 (257)
T cd03288 253 VRTD 256 (257)
T ss_pred Hhcc
Confidence 7643
No 118
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-42 Score=377.68 Aligned_cols=464 Identities=19% Similarity=0.201 Sum_probs=350.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 43 VFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSG 122 (1303)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~l~sr~~~Dv~~i~~~~~~~~~~~~~~~~~~~~~ 122 (1303)
.++.+.+........++.+..++|+++.++++..|+..+++. .++.++.++++|+..|. +-...++.+..+....+++
T Consensus 61 f~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~-~~~rlla~L~~Dvr~IS-f~~s~lp~~~qa~il~l~s 138 (546)
T COG4615 61 FMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERL-GSARLLAGLTSDVRNIS-FAFSRLPELVQAIILTLGS 138 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHh-cccchhhhhccccccee-ehHhhhHHHHHHHHHHHHH
Confidence 334445555556678999999999999999999999999996 78999999999999998 4455678899999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHH--HHHHHHHH
Q 000751 123 LAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLA--KYSYATSL 200 (1303)
Q Consensus 123 ~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~--~~~~~~~~ 200 (1303)
++.+.|+|+++.+++.+.+.+.++...+...+..+.....++..+++....+..++|-+.++....-.+. .+.|....
T Consensus 139 ~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a 218 (546)
T COG4615 139 AAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDA 218 (546)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcch
Confidence 9999999999988887777777777777777777888888899999999999999999999987643221 12222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 201 QATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGRIA 280 (1303)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a 280 (1303)
+...+..............+.+.+.+....+++|+.... +.-+.....++.+..+.+..|+.++...+..+.++.+|
T Consensus 219 ~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~---~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA 295 (546)
T COG4615 219 QEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSL---GWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVA 295 (546)
T ss_pred HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHH
Confidence 222221111111111112233333333334445543222 22222334445555566678999999999999999999
Q ss_pred HHHHHHHhccCCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhcc
Q 000751 281 AYRLYEMISRSSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERF 360 (1303)
Q Consensus 281 ~~ri~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~ 360 (1303)
.++|.++-..|+...-......|. -..|+++||.|+|+. ...-+.-||++|++||++.|+|.|||||||++++|.|+
T Consensus 296 ~~kiakle~~~~~a~~~~~q~~p~-~~~lelrnvrfay~~--~~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL 372 (546)
T COG4615 296 FNKIAKLELAPYKADFPRPQAFPD-WKTLELRNVRFAYQD--NAFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGL 372 (546)
T ss_pred HHHHHHhhcCCccccCCCCCcCCc-ccceeeeeeeeccCc--ccceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcc
Confidence 999998755433221111122232 236999999999963 33668899999999999999999999999999999999
Q ss_pred CCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhcccccCcc
Q 000751 361 YDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGYETQ 439 (1303)
Q Consensus 361 ~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ 439 (1303)
|.|++|+|++||.++..-++++.|+-++-|+-|-|||+.++ -++ .++++.+..-++.-.+....+ +.+|-=+
T Consensus 373 ~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll-----~~e~~as~q~i~~~LqrLel~~kts-l~d~~fs- 445 (546)
T COG4615 373 YQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL-----GPEGKASPQLIEKWLQRLELAHKTS-LNDGRFS- 445 (546)
T ss_pred cCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh-----CCccCCChHHHHHHHHHHHHhhhhc-ccCCccc-
Confidence 99999999999999999999999999999999999998764 122 367776666665554433222 2122111
Q ss_pred ccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh--cCCCeEEEEecCCccccccCEEEEE
Q 000751 440 VGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLL--MLGRSTIIIARRLSLIRNADYIAVM 517 (1303)
Q Consensus 440 vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~--~~~~t~i~ith~~~~~~~~d~i~~l 517 (1303)
...||-|||.|+|+--|++-+.||++|||=-+--||.=++.+.+.+.-. ..|||++.|||+-.+...|||++.+
T Consensus 446 ----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~ 521 (546)
T COG4615 446 ----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEM 521 (546)
T ss_pred ----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHH
Confidence 2469999999999999999999999999999999999999998776443 3599999999999999999999999
Q ss_pred eCceEeec
Q 000751 518 DEGRLFEM 525 (1303)
Q Consensus 518 ~~G~i~~~ 525 (1303)
++|+++|.
T Consensus 522 ~~G~~~e~ 529 (546)
T COG4615 522 RNGQLSEL 529 (546)
T ss_pred hcCceeec
Confidence 99999874
No 119
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=8e-45 Score=404.32 Aligned_cols=234 Identities=46% Similarity=0.747 Sum_probs=216.2
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
|+++|++++|++ ...++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.|+
T Consensus 1 i~~~~l~~~~~~-~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKP-DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCC-CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 578999999963 2357999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCE
Q 000751 389 LVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSI 467 (1303)
Q Consensus 389 ~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~i 467 (1303)
|++|++++|+.|++||+.++. ..+.+++.+.++..++.+++..+|.|+++.....+.+||||||||++||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 999999999999999999875 4456677778888889999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhcChhHHHHHH
Q 000751 468 LLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLATGDLYAELLK 543 (1303)
Q Consensus 468 lilDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 543 (1303)
+||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+++++..+.+.|+.++.
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~~~ 235 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAYLYQ 235 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHHHHh
Confidence 9999999999999999999999988778999999999999988999999999999999999999988888877654
No 120
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-44 Score=400.73 Aligned_cols=235 Identities=49% Similarity=0.786 Sum_probs=218.7
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++|++++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDPG--RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCCC--CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5799999999642 24999999999999999999999999999999999999999999999999999998888999999
Q ss_pred EEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000751 1134 LVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPI 1213 (1303)
Q Consensus 1134 ~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~I 1213 (1303)
|++|+|.+|++|++||+.++....+++++.++++.+++.+.+..+|.|+++.+..+..+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655667778888999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcCchhHHHHhh
Q 000751 1214 LLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQP 1291 (1303)
Q Consensus 1214 LlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~g~y~~l~~~ 1291 (1303)
|||||||++||+++...+.+.|.+..+ ++|+|++||+++.+..||++++|++|++++.|+++++.++.+.|..++.+
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~~~~~~~~ 235 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSK-GRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLYAEMWKA 235 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccHHHHHHhc
Confidence 999999999999999999999998755 68999999999999899999999999999999999999887778777654
No 121
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3.9e-44 Score=399.06 Aligned_cols=236 Identities=57% Similarity=0.949 Sum_probs=216.3
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++|++++|++....++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 57899999997533346999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000751 1134 LVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPI 1213 (1303)
Q Consensus 1134 ~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~I 1213 (1303)
|+||+|.+|+.|++||+.++......+++.+.++..++.+++..+|.|+++.+.....+||||||||++||||++++|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655556777888888899999999999999999888899999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcCchhHHHHh
Q 000751 1214 LLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQ 1290 (1303)
Q Consensus 1214 LlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~g~y~~l~~ 1290 (1303)
|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++++.|+.+++.+..+.++.++.
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~~~ 236 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQKGVYAKLVK 236 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcChhHHHHhh
Confidence 99999999999999999999999875 56999999999999889999999999999999999999887776666653
No 122
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.5e-44 Score=389.77 Aligned_cols=215 Identities=31% Similarity=0.536 Sum_probs=193.2
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.++++|++|+|+++ ++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.+||.|+.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~~~---~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYGGK---PILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEECCe---eEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 37899999999743 599999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCC-ccCcccHHHHHHcCCCC----------CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHH
Q 000751 1133 GLVQQEP-IIFSTTIRENIIYARHN----------ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRI 1201 (1303)
Q Consensus 1133 ~~VpQdp-~LF~gTIreNl~~g~~~----------~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1201 (1303)
+||||++ .-|.-||+|=+.+|+.. .+.+.+.+|++.+++.++..+. + ..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-------~----~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-------V----DELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-------c----cccChhHHHHH
Confidence 9999996 45667999999988532 1223578899999998886542 2 36999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCch-hHhhcCEEEEEeCCEEEEecChHHHh
Q 000751 1202 AIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLI-MGNKTTILIAHRAA-MMRHVDNIVVLNGGRIVEEGTHDSLL 1279 (1303)
Q Consensus 1202 aLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~~TvI~IaHrl~-ti~~~D~Iivl~~G~Ive~Gt~~eLl 1279 (1303)
.|||||.++|+||+||||||+||...+-.|++.++++. .+++|+|+|.|+++ ..+.||++++|++|+|+.+|+|+|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999886 33799999999997 56789999999999999999999988
Q ss_pred hc
Q 000751 1280 AK 1281 (1303)
Q Consensus 1280 ~~ 1281 (1303)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 64
No 123
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.9e-44 Score=396.00 Aligned_cols=228 Identities=48% Similarity=0.816 Sum_probs=212.5
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcc
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNH 1131 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~ 1131 (1303)
|.|+++|++++|++. .++|+|+||+|++||+++|+||||||||||+++|.|+++|.+|+|.+||.++.+.+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~--~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDEK--KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCCC--CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 468999999999742 249999999999999999999999999999999999999999999999999998888889999
Q ss_pred eEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCC
Q 000751 1132 LGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNA 1211 (1303)
Q Consensus 1132 i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p 1211 (1303)
++|+||+|.+|++|++||+.++.+....+++.++++.+++.++++.+|.|+++.++....+||||||||++|||||+++|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876555667888899999999999999999999999889999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1212 PILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1212 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|+++++.++.
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~~ 228 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMK-GRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAKK 228 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcC-CCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhhC
Confidence 99999999999999999999999998754 69999999999998899999999999999999999887654
No 124
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-44 Score=396.88 Aligned_cols=233 Identities=54% Similarity=0.884 Sum_probs=215.4
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++|++++|++.. .++|+|+||++++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~~-~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGDG-PPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCCC-ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 57999999997542 25999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000751 1134 LVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPI 1213 (1303)
Q Consensus 1134 ~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~I 1213 (1303)
|+||+|.+|+.|++||+.++....+.+++.+.++.+++.+++..+|.|+++.++.....||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655566778888888999999999999999999988999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcCchhHHH
Q 000751 1214 LLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRL 1288 (1303)
Q Consensus 1214 LlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~g~y~~l 1288 (1303)
|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++....+.|+.+
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~ 233 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMK-NRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGGVYAKL 233 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcC-CCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcCcchhhh
Confidence 999999999999999999999998754 69999999999999899999999999999999999998887777654
No 125
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=7.1e-44 Score=400.53 Aligned_cols=238 Identities=32% Similarity=0.472 Sum_probs=218.7
Q ss_pred CCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHh
Q 000751 305 VHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLR 384 (1303)
Q Consensus 305 ~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~ 384 (1303)
..+.|+++|++++|+. .+..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+.+...++
T Consensus 16 ~~~~i~~~~l~~~~~~-~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 16 LGGEIKIHDLCVRYEN-NLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CCceEEEEEEEEEeCC-CCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 4568999999999963 235699999999999999999999999999999999999999999999999999988888899
Q ss_pred cceEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccC
Q 000751 385 SQIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLN 464 (1303)
Q Consensus 385 ~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~ 464 (1303)
+.|+||+|++++|++|++||+.+......+++.++++.+++.+++..+|.|+++.+++.+.+||||||||++||||++++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~ 174 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRK 174 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999976544456678888888899999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhc-ChhHHHHHH
Q 000751 465 PSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLAT-GDLYAELLK 543 (1303)
Q Consensus 465 ~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~ 543 (1303)
|++|||||||++||++++..+.+.++++.+++|+|++||+++.+..||+|++|++|++++.|+++++.+. .+.|++++.
T Consensus 175 p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~ 254 (257)
T cd03288 175 SSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVR 254 (257)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHh
Confidence 9999999999999999999999999888779999999999999988999999999999999999999875 356776654
No 126
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=5.1e-44 Score=411.99 Aligned_cols=226 Identities=30% Similarity=0.489 Sum_probs=193.2
Q ss_pred EEEEeeEEECCCCC-CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHH---hh
Q 000751 1054 IELKNVDFCYPSRP-EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRW---LR 1129 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~---lR 1129 (1303)
|+++||+++|++.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996421 236999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cceEEEccCCccCc-ccHHHHHHcCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHH
Q 000751 1130 NHLGLVQQEPIIFS-TTIRENIIYARH--NASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIA 1202 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~-gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1202 (1303)
++|+||||++.+|+ .|++||+.++.. ..+. +++.++++.+++.++....| ..||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----------~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP-----------SNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 89999999999996 799999987532 1222 34567777777766554443 489999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHHHhh
Q 000751 1203 IARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDSLLA 1280 (1303)
Q Consensus 1203 LARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~eLl~ 1280 (1303)
|||||+.+|+|||||||||+||+.+...+.+.|++..++ +.|+|+|||+++.+.. ||+|++|++|+|+|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 999999999999999999999999999999999987543 6899999999999854 99999999999999999999986
Q ss_pred cC--chhHHHHh
Q 000751 1281 KN--GLYVRLMQ 1290 (1303)
Q Consensus 1281 ~~--g~y~~l~~ 1290 (1303)
.. ...+.++.
T Consensus 231 ~p~~~~~~~~~~ 242 (343)
T TIGR02314 231 HPKTPLAQKFIR 242 (343)
T ss_pred CCCcHHHHHHHh
Confidence 52 33444444
No 127
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-44 Score=403.80 Aligned_cols=212 Identities=29% Similarity=0.462 Sum_probs=191.6
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.|+++||+++|+ +..+|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.|||.++.+++++. +.|
T Consensus 3 ~i~l~~v~K~yg---~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFG---SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcC---CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 589999999994 222999999999999999999999999999999999999999999999999999998875 789
Q ss_pred EEEeccccccc-HhHHHHHhcCCC-------CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHH
Q 000751 388 GLVTQEPALLS-LSIRDNIAYGRD-------ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIAR 459 (1303)
Q Consensus 388 ~~v~Q~~~l~~-~ti~~ni~~~~~-------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialAR 459 (1303)
|+|+|+..||. .||+|||.|+.. ..++++.++++..++.+.+++.|. .||||||||+||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~-----------~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPL-----------QLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcc-----------cCChhhHHHHHHHH
Confidence 99999999995 799999999952 235678888888888888877764 79999999999999
Q ss_pred hhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhcC
Q 000751 460 AVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLATG 535 (1303)
Q Consensus 460 al~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 535 (1303)
||.++|++++||||+|+||++....+...|+++.+ +.|+|.|||+...+. .||||+||++|+|.+.|++.|+..+.
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 99999999999999999999999999888877653 789999999997765 69999999999999999999998764
No 128
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.1e-43 Score=390.96 Aligned_cols=221 Identities=35% Similarity=0.572 Sum_probs=206.5
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcc
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNH 1131 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~ 1131 (1303)
|.|+++|++++|+... .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~~-~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPNL-PPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCCC-cccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 4689999999997432 359999999999999999999999999999999999999999999999999999998899999
Q ss_pred eEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCC
Q 000751 1132 LGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNA 1211 (1303)
Q Consensus 1132 i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p 1211 (1303)
++|+||+|.+|++|++||+.+... .+.+++.++++..++.+++..+|.|+++.++..+.+||||||||++||||++++|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999987643 5677899999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecCh
Q 000751 1212 PILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTH 1275 (1303)
Q Consensus 1212 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~ 1275 (1303)
+++||||||++||+.+.+.+.+.|++... ++|+|++||+++.+..||+|++|++|++++.|++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFK-DCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 99999999999999999999999998754 5899999999999999999999999999998863
No 129
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.7e-43 Score=434.62 Aligned_cols=199 Identities=26% Similarity=0.432 Sum_probs=168.3
Q ss_pred cceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC--CccEEEECCeeCCCCCHHHhhcceEEEccCCc-cCccc
Q 000751 1069 VLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP--VAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPI-IFSTT 1145 (1303)
Q Consensus 1069 ~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~--~~G~I~idG~di~~~~~~~lR~~i~~VpQdp~-LF~gT 1145 (1303)
...|+||+=-++||...|++|+||||||||++.|.+-..- .+|+|+|||.+..+ +..++.+|||.|++. +=.-|
T Consensus 804 ~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~~T 880 (1391)
T KOG0065|consen 804 RQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPELT 880 (1391)
T ss_pred eEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcccc
Confidence 3589999999999999999999999999999999987543 57999999998766 789999999999875 44569
Q ss_pred HHHHHHcCC----C-CCCHHH----HHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCC-CEEE
Q 000751 1146 IRENIIYAR----H-NASEAE----VKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNA-PILL 1215 (1303)
Q Consensus 1146 IreNl~~g~----~-~~~~~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p-~ILl 1215 (1303)
|||-|.|.. | +.+++| ++++.+..++.+. =|..||.-|..||..||.|+.||--|+.|| .||+
T Consensus 881 VrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~-------~daiVG~~G~GLs~eQRKrLTIgVELvA~P~~ilF 953 (1391)
T KOG0065|consen 881 VRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEY-------ADALVGLPGSGLSTEQRKRLTIGVELVANPSSILF 953 (1391)
T ss_pred hHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhh-------hhhhccCCCCCCCHHHhceeeEEEEEecCCceeEE
Confidence 999997652 1 234333 4555555555443 356788888999999999999999999999 8999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCch--hHhhcCEEEEEe-CCEEEEecChHH
Q 000751 1216 LDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAA--MMRHVDNIVVLN-GGRIVEEGTHDS 1277 (1303)
Q Consensus 1216 LDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~--ti~~~D~Iivl~-~G~Ive~Gt~~e 1277 (1303)
||||||+||+++...|.+.++++...|+||++.=|.++ ..+..|+++.|+ +|+.|..|+..+
T Consensus 954 LDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 954 LDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred ecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 99999999999999999999999888999999999987 467899999996 589999998644
No 130
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2e-44 Score=354.06 Aligned_cols=209 Identities=28% Similarity=0.455 Sum_probs=186.9
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
|.+++|.|+|...+ =..+++|++||++||+||||||||||++++.||..|.+|+|.|+|+|....++. ++-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 56789999995321 258899999999999999999999999999999999999999999999877665 46799
Q ss_pred EEeccccccc-HhHHHHHhcCC-------CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHh
Q 000751 389 LVTQEPALLS-LSIRDNIAYGR-------DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARA 460 (1303)
Q Consensus 389 ~v~Q~~~l~~-~ti~~ni~~~~-------~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARa 460 (1303)
+++||.-||. -||++||.+|. ..+.+++..++...++..+.++||. .||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 9999999995 79999999994 2345678999999999999999986 699999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHhhcC
Q 000751 461 VLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELLATG 535 (1303)
Q Consensus 461 l~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 535 (1303)
|+++-|||+||||+|+|||.-+..+...+.++. ++.|+++|||+++.+.. +|+++++++|||.+.|+.+++....
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~ 221 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGK 221 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccC
Confidence 999999999999999999999888888877664 57899999999998764 9999999999999999999988754
No 131
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-43 Score=394.78 Aligned_cols=233 Identities=51% Similarity=0.773 Sum_probs=215.0
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
++++|++++|++ +..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 478999999952 346999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCE
Q 000751 389 LVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSI 467 (1303)
Q Consensus 389 ~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~i 467 (1303)
|++|++.+|+.|++||+.++. ..+++++.++++.+++.+.+..+|.|+++.+..+..+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999875 5566677888888899999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhcChhHHHHHH
Q 000751 468 LLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLATGDLYAELLK 543 (1303)
Q Consensus 468 lilDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 543 (1303)
|||||||++||+++...+.+.|.++.+++|+|++||+++.+..||++++|++|++++.|+.+++....+.|+..+.
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~~~~~~~ 234 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLYAEMWK 234 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccHHHHHHh
Confidence 9999999999999999999999888778999999999999988999999999999999999998877666665543
No 132
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.4e-44 Score=368.30 Aligned_cols=221 Identities=32% Similarity=0.513 Sum_probs=192.6
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHH---HHh
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLE---WLR 384 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~~ 384 (1303)
.|++++|+|+| +++.+|+||||+|++||+++|+||||||||||+++|.|+..|++|+|.++|.|+.+++.+ .+|
T Consensus 8 ~I~vr~v~~~f---G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 8 LIEVRGVTKSF---GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred eEEEeeeeeec---CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 59999999999 356899999999999999999999999999999999999999999999999999998764 468
Q ss_pred cceEEEeccccccc-HhHHHHHhcCC----CCCHHHHHH----HHHHhcchHH-HHhcccccCccccCCCCCCChHHHHH
Q 000751 385 SQIGLVTQEPALLS-LSIRDNIAYGR----DATLDQIEE----AAKIAHAHTF-ISSLEKGYETQVGRAGLALTEEQKIK 454 (1303)
Q Consensus 385 ~~i~~v~Q~~~l~~-~ti~~ni~~~~----~~~~~~~~~----~~~~~~~~~~-i~~l~~g~~t~vg~~g~~LSgGqkqr 454 (1303)
+++|+++|.-.||+ .||+||+.|.- ..+++.+++ .++.++|... .+.+| ..||||.+.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHHH
Confidence 99999999999995 69999999962 445555444 3456666655 44444 4799999999
Q ss_pred HHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHH
Q 000751 455 LSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 455 ialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 531 (1303)
+|||||+..||+|+++|||||+|||.+...+.+.|+++.+ +.|+|+|||+++++.. ||+|+++.+|+|+..|+++|+
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999999999999999999888877753 8999999999998865 999999999999999999999
Q ss_pred hhcChhH-HHHH
Q 000751 532 LATGDLY-AELL 542 (1303)
Q Consensus 532 ~~~~~~~-~~~~ 542 (1303)
.+.+..| ++++
T Consensus 234 ~~sd~P~v~qf~ 245 (263)
T COG1127 234 LASDDPWVRQFF 245 (263)
T ss_pred HhCCCHHHHHHh
Confidence 8875443 4433
No 133
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-43 Score=391.93 Aligned_cols=225 Identities=48% Similarity=0.767 Sum_probs=209.7
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.|+++|++|+|++ .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+|+.+
T Consensus 2 ~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 2 EIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred eEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 5899999999952 34699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCC
Q 000751 388 GLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPS 466 (1303)
Q Consensus 388 ~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ 466 (1303)
+|++|++.+|.+|++||+.++. ....+++.++++.+++.++++.+|.|+++.++.....||||||||++|||||+.+|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999876 455677888888899999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhc
Q 000751 467 ILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 467 ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
+|||||||++||+.+.+.+.+.+.++.+++|+|++||+++.+..||++++|++|++++.|+.+++.++
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 99999999999999999999999988778999999999999888999999999999999998887654
No 134
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-44 Score=385.44 Aligned_cols=217 Identities=34% Similarity=0.588 Sum_probs=197.9
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCC-CCCHHHhhcc
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLK-LYNLRWLRNH 1131 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~-~~~~~~lR~~ 1131 (1303)
.|+++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|++.|++|+|.+||.++. ..+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48999999999876 46999999999999999999999999999999999999999999999999999 4889999999
Q ss_pred eEEEccCC--ccCcccHHHHHHcCCCC--CCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHH
Q 000751 1132 LGLVQQEP--IIFSTTIRENIIYARHN--ASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAI 1203 (1303)
Q Consensus 1132 i~~VpQdp--~LF~gTIreNl~~g~~~--~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaL 1203 (1303)
++||.|+| .+|..||.|.+.||..+ .+. +.+.++++.+++.++.++.|. +||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p~-----------~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPPF-----------NLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCcc-----------ccCCcceeeHHh
Confidence 99999999 89999999999998543 343 346778889998887655553 899999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHHHhhc
Q 000751 1204 ARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1204 ARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
|.+|..+|+|||||||||+||+...+.+.+.++++..+ ++|+|+|||+++.+.. ||+++||++|+++.+|+|+++.++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 99999999999999999999999999999999998665 5799999999998877 999999999999999999999876
Q ss_pred C
Q 000751 1282 N 1282 (1303)
Q Consensus 1282 ~ 1282 (1303)
.
T Consensus 230 ~ 230 (235)
T COG1122 230 A 230 (235)
T ss_pred h
Confidence 4
No 135
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-44 Score=378.02 Aligned_cols=197 Identities=30% Similarity=0.463 Sum_probs=174.0
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.+++++|+++|+ ...+|+||||+|++||+++|+||||||||||+++|.|+..|++|+|.++|.++..- ...+
T Consensus 3 ~l~i~~v~~~f~---~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFG---GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeC---ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 488999999995 36799999999999999999999999999999999999999999999999987443 3479
Q ss_pred EEEeccccccc-HhHHHHHhcCCCC-------CHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHH
Q 000751 388 GLVTQEPALLS-LSIRDNIAYGRDA-------TLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIAR 459 (1303)
Q Consensus 388 ~~v~Q~~~l~~-~ti~~ni~~~~~~-------~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialAR 459 (1303)
+||+|++.||. -||+||+.+|.+. ..++..+.++.+++.+|-...|. .||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHHH
Confidence 99999999997 7999999998532 23457778888888888777764 79999999999999
Q ss_pred hhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccc-cccCEEEEEeC--ceEe
Q 000751 460 AVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLI-RNADYIAVMDE--GRLF 523 (1303)
Q Consensus 460 al~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~-~~~d~i~~l~~--G~i~ 523 (1303)
||+.+|+||+||||++|||+.|...+++.+.++. .++|+++|||+.+.. ..+|||++|.+ |+|.
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 9999999999999999999999999999887764 469999999999875 56999999998 4553
No 136
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.8e-44 Score=398.07 Aligned_cols=213 Identities=32% Similarity=0.534 Sum_probs=194.1
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+.+|.+.. +|+|+||+|+.||.++|+|||||||||++++|.||.+|++|+|.|||.|++++++++ +.|
T Consensus 3 ~i~l~~v~K~yg~~~---~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSFE---VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCce---eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 589999999996432 999999999999999999999999999999999999999999999999999999876 899
Q ss_pred EEEccCCccCcc-cHHHHHHcCCCCC------CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHH
Q 000751 1133 GLVQQEPIIFST-TIRENIIYARHNA------SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIAR 1205 (1303)
Q Consensus 1133 ~~VpQdp~LF~g-TIreNl~~g~~~~------~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLAR 1205 (1303)
++|+|+..||+- ||+|||.|+.... -++++.++++..++.+.+++.|. +||||||||+||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~-----------~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPL-----------QLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcc-----------cCChhhHHHHHHHH
Confidence 999999999975 9999999985421 25678899999999999988875 79999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCch-hHhhcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1206 VVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAA-MMRHVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1206 Allr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~-ti~~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
||+++|+++|||||.|+||++....+...|+++.++ +.|+|.|||+.. ...-+|||+||++|+|.+.|+|.|+.++
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~ 224 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYER 224 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhC
Confidence 999999999999999999999999999998876432 579999999875 5567999999999999999999999976
No 137
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-43 Score=403.22 Aligned_cols=222 Identities=24% Similarity=0.443 Sum_probs=187.6
Q ss_pred cEEEEeeEEECCCCC--CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCC-------
Q 000751 1053 SIELKNVDFCYPSRP--EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLY------- 1123 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~------- 1123 (1303)
.|+++||+|+|++.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++.+.
T Consensus 21 ~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~ 100 (320)
T PRK13631 21 ILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELI 100 (320)
T ss_pred eEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccccc
Confidence 599999999997431 23599999999999999999999999999999999999999999999999998753
Q ss_pred ---------CHHHhhcceEEEccCC--ccCcccHHHHHHcCCC--CCCHHHHHHHHHHhchHHHHHhCCCCcc-cccCCC
Q 000751 1124 ---------NLRWLRNHLGLVQQEP--IIFSTTIRENIIYARH--NASEAEVKEAARIANAHHFISSLPHGYD-THVGMR 1189 (1303)
Q Consensus 1124 ---------~~~~lR~~i~~VpQdp--~LF~gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~I~~lp~Gld-t~vge~ 1189 (1303)
+...+|++++||+|+| .+|+.|++|||.++.. ..+.++..+ . ..++++.+ |++ ......
T Consensus 101 ~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~---~--~~~~l~~~--gL~~~~~~~~ 173 (320)
T PRK13631 101 TNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK---L--AKFYLNKM--GLDDSYLERS 173 (320)
T ss_pred ccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH---H--HHHHHHHc--CCChhHhcCC
Confidence 3567899999999998 7999999999987632 223333322 1 12334443 453 345667
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhH-hhcCEEEEEeCCE
Q 000751 1190 GVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMM-RHVDNIVVLNGGR 1268 (1303)
Q Consensus 1190 G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti-~~~D~Iivl~~G~ 1268 (1303)
+.+||||||||++|||||+++|+|||||||||+||+.+++.+.+.|.+...+++|+|+|||+++.+ ..||+|++|++|+
T Consensus 174 ~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~ 253 (320)
T PRK13631 174 PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGK 253 (320)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 789999999999999999999999999999999999999999999988755579999999999976 5799999999999
Q ss_pred EEEecChHHHhhc
Q 000751 1269 IVEEGTHDSLLAK 1281 (1303)
Q Consensus 1269 Ive~Gt~~eLl~~ 1281 (1303)
|++.|+|+++.+.
T Consensus 254 i~~~g~~~~~~~~ 266 (320)
T PRK13631 254 ILKTGTPYEIFTD 266 (320)
T ss_pred EEEeCCHHHHhcC
Confidence 9999999987543
No 138
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.2e-43 Score=388.58 Aligned_cols=219 Identities=33% Similarity=0.512 Sum_probs=206.2
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.|+++|++|+|+. .++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.|
T Consensus 2 ~l~~~~l~~~~~~-~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 2 DIEFKNVSLRYRP-NLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred cEEEEEEEEecCC-CCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 5899999999963 235799999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCE
Q 000751 388 GLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSI 467 (1303)
Q Consensus 388 ~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~i 467 (1303)
+|++|++.+|++|++||+.+......+++.++++..++.+++..+|.|+++..++.+.+||||||||++|||||+++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987766677888999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeCceEeeccC
Q 000751 468 LLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGT 527 (1303)
Q Consensus 468 lilDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~ 527 (1303)
+||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 999999999999999999999998877899999999999998899999999999998875
No 139
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.5e-43 Score=392.59 Aligned_cols=233 Identities=60% Similarity=0.941 Sum_probs=211.9
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
++++|++++|++..+.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+....++.++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999996433357999999999999999999999999999999999999999999999999998877777788899
Q ss_pred EEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCE
Q 000751 389 LVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSI 467 (1303)
Q Consensus 389 ~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~i 467 (1303)
|++|++.+|+.|++||+.++. ....+++.+.++.+++.+++..+|.|+++.......+||||||||++||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999875 4455667777888889999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhcChhHHHH
Q 000751 468 LLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLATGDLYAEL 541 (1303)
Q Consensus 468 lilDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 541 (1303)
|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||+|++|++|++++.|+.+++......++.+
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~ 234 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQKGVYAKL 234 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcChhHHHH
Confidence 99999999999999999999998877789999999999998899999999999999999998887765555444
No 140
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=4.6e-44 Score=385.97 Aligned_cols=213 Identities=31% Similarity=0.492 Sum_probs=192.2
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.++++|++|+|+ ++++|+|+||+|++||+++|+||||||||||+|+|+|+..|.+|+|.+||+++.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 378999999994 56899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccc-ccccHhHHHHHhcCC-C----------CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHH
Q 000751 388 GLVTQEP-ALLSLSIRDNIAYGR-D----------ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKL 455 (1303)
Q Consensus 388 ~~v~Q~~-~l~~~ti~~ni~~~~-~----------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqri 455 (1303)
|||||++ .-|.-||+|-+.+|+ + .+.+.+.++++.+++.++..+ .-..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r-----------~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADR-----------PVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcC-----------cccccChhHHHHH
Confidence 9999996 456789999999995 2 123357788898888777543 2347999999999
Q ss_pred HHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccc-cccCEEEEEeCceEeeccChHHHh
Q 000751 456 SIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLI-RNADYIAVMDEGRLFEMGTHDELL 532 (1303)
Q Consensus 456 alARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~ 532 (1303)
.|||||.++|+||+||||||+||......+++.++++. +|+|+|+|.|+++.. +.||++++|++|+|+..|+++|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999998876 479999999999875 579999999999999999999887
Q ss_pred hc
Q 000751 533 AT 534 (1303)
Q Consensus 533 ~~ 534 (1303)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 64
No 141
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-43 Score=391.99 Aligned_cols=231 Identities=49% Similarity=0.812 Sum_probs=212.7
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
|+++|++++|++. +.++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.|+
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999632 236999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCE
Q 000751 389 LVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSI 467 (1303)
Q Consensus 389 ~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~i 467 (1303)
|++|++.+|..|++||+.++. ....+++.+.++.+++.++++.+|.|+++..+.....||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999875 4566677888888899999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhcChhHHH
Q 000751 468 LLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLATGDLYAE 540 (1303)
Q Consensus 468 lilDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 540 (1303)
+||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+.+++....+.|+.
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~ 232 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGGVYAK 232 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcCcchhh
Confidence 9999999999999999999999988889999999999999988999999999999999999998777655543
No 142
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-44 Score=403.51 Aligned_cols=212 Identities=30% Similarity=0.522 Sum_probs=192.3
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.++++||+++|. +..+++|+||+|++||+++++|||||||||++++|+||..|++|+|.+||+|+.+++++ ++.|
T Consensus 5 ~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 5 ALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred eEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 599999999994 56899999999999999999999999999999999999999999999999999998887 6789
Q ss_pred EEEecccccc-cHhHHHHHhcCCC----CCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHH
Q 000751 388 GLVTQEPALL-SLSIRDNIAYGRD----ATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIA 458 (1303)
Q Consensus 388 ~~v~Q~~~l~-~~ti~~ni~~~~~----~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialA 458 (1303)
|+|+|+..|| +.||+|||.||.. ..+ +++.++++..++.++-.+.|. .|||||+||+|||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~-----------qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPH-----------QLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChh-----------hhChHHHHHHHHH
Confidence 9999999999 5899999999953 222 378888888888887766654 7999999999999
Q ss_pred HhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcc-ccccCEEEEEeCceEeeccChHHHhhcC
Q 000751 459 RAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSL-IRNADYIAVMDEGRLFEMGTHDELLATG 535 (1303)
Q Consensus 459 Ral~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~-~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 535 (1303)
|||..+|++|+||||.|+||.+-+..++..++++. .|.|.|+|||+.+. +..+|||+||++|+|...|+++|+..+.
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999999999988887764 48999999999976 5679999999999999999999998764
No 143
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.1e-43 Score=348.78 Aligned_cols=212 Identities=32% Similarity=0.536 Sum_probs=189.7
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|.+++|.|+|...+ =.++++|++||+|||+||||||||||++++.||..|.+|+|+|||+|....++. ++-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 57899999996543 278999999999999999999999999999999999999999999999887764 46799
Q ss_pred EEccCCccCc-ccHHHHHHcCCCC------CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1134 LVQQEPIIFS-TTIRENIIYARHN------ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1134 ~VpQdp~LF~-gTIreNl~~g~~~------~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
+++||..||. -||++|+.+|... ...+.+..++..+|+.+|.++||. .||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 9999999997 5999999998642 234678999999999999999996 799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHhhcCc
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLLAKNG 1283 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl~~~g 1283 (1303)
|+|+.+||+||||.||||+.-...+...+.+++.+ +.|+++|||.++-+ +.+|+++++++|||.++|+-+++++..+
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~ 222 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKA 222 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCC
Confidence 99999999999999999999999998888776433 57999999999865 5699999999999999999999998754
No 144
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.3e-44 Score=355.32 Aligned_cols=206 Identities=27% Similarity=0.450 Sum_probs=185.4
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCH---HHHhc
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKL---EWLRS 385 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~~~ 385 (1303)
|+|+||+++|++ ..++|+||||+|++||++.|+||||||||||+|+|.+...|+.|+|.++|+|+..++. ..+|+
T Consensus 2 I~f~~V~k~Y~~--g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPG--GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCC--CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 799999999974 3679999999999999999999999999999999999999999999999999987754 45899
Q ss_pred ceEEEecccccc-cHhHHHHHhcCC---CCC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHH
Q 000751 386 QIGLVTQEPALL-SLSIRDNIAYGR---DAT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSI 457 (1303)
Q Consensus 386 ~i~~v~Q~~~l~-~~ti~~ni~~~~---~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrial 457 (1303)
+||+|+||..|. +-||.||++|.- ... .+++.++++.++|.+-...||. .|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHH
Confidence 999999999877 579999999873 222 3567788899999988888885 699999999999
Q ss_pred HHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCCeEEEEecCCccccc-cCEEEEEeCceEeeccC
Q 000751 458 ARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLL-MLGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGT 527 (1303)
Q Consensus 458 ARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~-~~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~ 527 (1303)
|||+..+|++||-||||.+|||.+...|++.+.++ +.|.||++.||+.+.+.. --+++.+++|+++....
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 99999999999999999999999999999999887 469999999999999875 67899999999987543
No 145
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-43 Score=367.53 Aligned_cols=227 Identities=30% Similarity=0.490 Sum_probs=188.8
Q ss_pred cEEEEeeEEECCCCC-CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCC-HHHhhc
Q 000751 1053 SIELKNVDFCYPSRP-EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYN-LRWLRN 1130 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~-~~~lR~ 1130 (1303)
.++++|+++.|+... -.++|+||||+|.+||++||||+||||||||.++|.|+.+|++|+|.+||.++.... .+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 478999999997542 125999999999999999999999999999999999999999999999998766543 347788
Q ss_pred ceEEEccCCcc-Cc--ccHHHHHH----cCCCCCCHHHHHHHHHHhchHH-HHHhCCCCcccccCCCCCCCChHHHHHHH
Q 000751 1131 HLGLVQQEPII-FS--TTIRENII----YARHNASEAEVKEAARIANAHH-FISSLPHGYDTHVGMRGVDLTPGQKQRIA 1202 (1303)
Q Consensus 1131 ~i~~VpQdp~L-F~--gTIreNl~----~g~~~~~~~ei~~al~~a~l~~-~I~~lp~Gldt~vge~G~~LSgGQrQRla 1202 (1303)
.+.+|+|||.- +| -||++-|. ...-+-.+.+++++++.+|+.+ |..+.|. .||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~-----------eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRPH-----------ELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCch-----------hcChhHHHHHH
Confidence 99999999952 22 36666663 2111224566899999999865 4444553 79999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHHHhh
Q 000751 1203 IARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDSLLA 1280 (1303)
Q Consensus 1203 LARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~eLl~ 1280 (1303)
|||||.-+|++||||||||+||+-.+++|++.+.+..++ +-|.|+|||+++.+.. ||||+||++|+++|.++-+++.+
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 999999999999999999999999999999999887553 3499999999999875 99999999999999999999998
Q ss_pred c-CchhHHHHh
Q 000751 1281 K-NGLYVRLMQ 1290 (1303)
Q Consensus 1281 ~-~g~y~~l~~ 1290 (1303)
. ...|.+...
T Consensus 232 ~~~h~ytr~Ll 242 (252)
T COG1124 232 HPSHPYTRELL 242 (252)
T ss_pred CCccHHHHHHH
Confidence 7 445555443
No 146
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-43 Score=390.80 Aligned_cols=219 Identities=32% Similarity=0.479 Sum_probs=186.7
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCH---HHhhc
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNL---RWLRN 1130 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~---~~lR~ 1130 (1303)
|+++||+++|++. ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGGR---TVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECCE---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 5789999999643 59999999999999999999999999999999999999999999999999988764 56789
Q ss_pred ceEEEccCCccCcc-cHHHHHHcCCC---CCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHH
Q 000751 1131 HLGLVQQEPIIFST-TIRENIIYARH---NASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIA 1202 (1303)
Q Consensus 1131 ~i~~VpQdp~LF~g-TIreNl~~g~~---~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1202 (1303)
+++||||+|.+|+. |++||+.++.. ..+. +++.++++..++.++..+ ...+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDL-----------YPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHHH
Confidence 99999999999986 99999987521 1232 234555666655443322 23479999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHHHhh
Q 000751 1203 IARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDSLLA 1280 (1303)
Q Consensus 1203 LARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~eLl~ 1280 (1303)
|||||+++|+||||||||++||+.+.+.+.+.|++..+ .++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999999999998754 26899999999998764 99999999999999999999886
Q ss_pred cCchhH
Q 000751 1281 KNGLYV 1286 (1303)
Q Consensus 1281 ~~g~y~ 1286 (1303)
....|.
T Consensus 227 ~~~~~~ 232 (235)
T cd03261 227 SDDPLV 232 (235)
T ss_pred CCChhh
Confidence 654443
No 147
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.9e-43 Score=370.56 Aligned_cols=207 Identities=33% Similarity=0.534 Sum_probs=176.7
Q ss_pred EEEEeeEEECCCCC-CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHH---h-
Q 000751 1054 IELKNVDFCYPSRP-EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRW---L- 1128 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~---l- 1128 (1303)
++++||+..|.... ...+|+++||+|++||.|||+||||||||||+++|-++..|++|+|.++|.|+..++.+. +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67999999996432 246999999999999999999999999999999999999999999999999999998543 3
Q ss_pred hcceEEEccCCccCcc-cHHHHHHcC----CCCC--CHHHHHHHHHHhchHHHHH-hCCCCcccccCCCCCCCChHHHHH
Q 000751 1129 RNHLGLVQQEPIIFST-TIRENIIYA----RHNA--SEAEVKEAARIANAHHFIS-SLPHGYDTHVGMRGVDLTPGQKQR 1200 (1303)
Q Consensus 1129 R~~i~~VpQdp~LF~g-TIreNl~~g----~~~~--~~~ei~~al~~a~l~~~I~-~lp~Gldt~vge~G~~LSgGQrQR 1200 (1303)
|++||||+|+..|++. |++||+.++ .... ..+...+.++..|+.+... ..| .+||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p-----------~eLSGGqqQR 150 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKP-----------SELSGGQQQR 150 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCc-----------hhcCHHHHHH
Confidence 5679999999999875 999999853 2111 1344566666667765544 333 4899999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhhcCEEEEEeCCEEEE
Q 000751 1201 IAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRHVDNIVVLNGGRIVE 1271 (1303)
Q Consensus 1201 laLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive 1271 (1303)
+||||||+.+|+|++.||||.+||.++.+.|.+.+++..++ ++|+|+|||+......|||++.|.+|++.+
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999999987543 689999999999999999999999999543
No 148
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-43 Score=383.05 Aligned_cols=214 Identities=34% Similarity=0.555 Sum_probs=192.9
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecC-CCCHHHHhcc
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIK-NLKLEWLRSQ 386 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~-~~~~~~~~~~ 386 (1303)
.++++|++|+|+++ .++|+|+||+|++|+.++|+|+||||||||+++|.|++.|++|+|.++|.++. ..+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48899999999743 68999999999999999999999999999999999999999999999999998 4788999999
Q ss_pred eEEEeccc--ccccHhHHHHHhcCC---CCCHH----HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHH
Q 000751 387 IGLVTQEP--ALLSLSIRDNIAYGR---DATLD----QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSI 457 (1303)
Q Consensus 387 i~~v~Q~~--~l~~~ti~~ni~~~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrial 457 (1303)
||||+|+| .+|..||.|.++||. ..+.+ ++.++++.+++.++.++- ..+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----------p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRP-----------PFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCC-----------ccccCCcceeeHHh
Confidence 99999999 799999999999995 34444 466777777777664443 45899999999999
Q ss_pred HHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHhhc
Q 000751 458 ARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 458 ARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
|.+|..+|++||||||||+||+...+.+.+.++++.+ ++|+|++||+++.+.. ||++++|++|+++.+|+++++.+.
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999999999999864 5799999999999876 999999999999999999888764
No 149
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=8.5e-43 Score=383.61 Aligned_cols=220 Identities=40% Similarity=0.729 Sum_probs=202.9
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcc
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNH 1131 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~ 1131 (1303)
|.|+++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 468999999999643 2359999999999999999999999999999999999999999999999999988888788899
Q ss_pred eEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCC
Q 000751 1132 LGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNA 1211 (1303)
Q Consensus 1132 i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p 1211 (1303)
++|+||+|.+|+.|++||+.++....+.+++.++++..++.+.+..+|.|++|.+.....+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998875444566788899999999999999999999999888999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEec
Q 000751 1212 PILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1212 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~G 1273 (1303)
++|||||||++||+.+...+.+.|++... ++|+|++||+++.+..||+|++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLG-DKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 99999999999999999999999998755 48999999999988899999999999998765
No 150
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.1e-43 Score=370.44 Aligned_cols=206 Identities=32% Similarity=0.467 Sum_probs=173.8
Q ss_pred EEEEEEEEEcCCCC-CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHH---H-
Q 000751 309 IEFRNVYFSYLSRP-EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW---L- 383 (1303)
Q Consensus 309 i~~~~v~f~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~- 383 (1303)
++++||++.|.... ..++|+++||+|++||++||+||||||||||+++|.|+-.|++|+|.++|.|+..++.+. +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996322 246999999999999999999999999999999999999999999999999999987543 3
Q ss_pred hcceEEEecccccc-cHhHHHHHhcC----C-CC--CHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHH
Q 000751 384 RSQIGLVTQEPALL-SLSIRDNIAYG----R-DA--TLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKL 455 (1303)
Q Consensus 384 ~~~i~~v~Q~~~l~-~~ti~~ni~~~----~-~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqri 455 (1303)
|++||||+|+..|+ +.|++|||.+. . .. ..++..+.++..++.+... ......||||||||+
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHHH
Confidence 45799999999988 57999999953 2 11 1334444555555544333 133458999999999
Q ss_pred HHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccccCEEEEEeCceEee
Q 000751 456 SIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRNADYIAVMDEGRLFE 524 (1303)
Q Consensus 456 alARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~ 524 (1303)
||||||+.+|+|++.||||++||.++.+.+.+.+.++. .|+|+|+|||+......|||++.|.||++..
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999998884 4889999999999999999999999999543
No 151
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-43 Score=374.86 Aligned_cols=211 Identities=27% Similarity=0.500 Sum_probs=188.2
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++|++|+|.++ +||+||||+|++|+++||+||||||||||+++++|+.+|.+|+|.++|.+++.... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 58999999999744 39999999999999999999999999999999999999999999999998776543 5789
Q ss_pred EEEccCC---ccCcccHHHHHHcCCCC----------CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHH
Q 000751 1133 GLVQQEP---IIFSTTIRENIIYARHN----------ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQ 1199 (1303)
Q Consensus 1133 ~~VpQdp---~LF~gTIreNl~~g~~~----------~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1199 (1303)
|||||.. +-|+-||+|=+.+|... .+.+++.+||+.+++.++.. -++| .|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~-------r~i~----~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRD-------RQIG----ELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhC-------Cccc----ccCcHHHH
Confidence 9999954 67899999999887432 12478999999999998754 3555 69999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHH
Q 000751 1200 RIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSL 1278 (1303)
Q Consensus 1200 RlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eL 1278 (1303)
|+.|||||+++|++|+|||||+++|+.++..+.+.|.++..+||||++|+|+++.+. .||+|+.| |++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhc
Confidence 999999999999999999999999999999999999998877899999999999775 59999999 5678999999999
Q ss_pred hhc
Q 000751 1279 LAK 1281 (1303)
Q Consensus 1279 l~~ 1281 (1303)
+..
T Consensus 226 ~~~ 228 (254)
T COG1121 226 LTE 228 (254)
T ss_pred cCH
Confidence 865
No 152
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-40 Score=357.68 Aligned_cols=475 Identities=18% Similarity=0.248 Sum_probs=349.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChhhHHHHHHhhHHHHHHHHHHHHHH
Q 000751 775 CLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSI 854 (1303)
Q Consensus 775 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~ 854 (1303)
...+.++.++..+.+.+........+++...++|.++.++++..|+.-+.+ -+.++++.++.+|+..|. +-...++.
T Consensus 51 l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier--~~~~rlla~L~~Dvr~IS-f~~s~lp~ 127 (546)
T COG4615 51 LPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIER--LGSARLLAGLTSDVRNIS-FAFSRLPE 127 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH--hcccchhhhhccccccee-ehHhhhHH
Confidence 334444444555566667778888999999999999999999999998865 678999999999999988 44455667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH-
Q 000751 855 FIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGN- 933 (1303)
Q Consensus 855 ~i~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI~a~~~~~- 933 (1303)
+.+.....+++.+...++++++.+++++.+.+..+..++......+.-+..++.+.+.....+..++|.+..+...-..
T Consensus 128 ~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~ 207 (546)
T COG4615 128 LVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAE 207 (546)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHH
Confidence 7888888888888889999998888777666655544443333333345567777788888888899999887654322
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHh
Q 000751 934 -KVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFG 1012 (1303)
Q Consensus 934 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1303)
...+.|...-....+...+...+......+++.+.+....+.+|..-.. +.-+.....+..+.+.+.-.++.+..+
T Consensus 208 ~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~---~w~st~~a~tivlvlLflr~pL~s~vg 284 (546)
T COG4615 208 YVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSL---GWASTNVAATIVLVLLFLRTPLLSAVG 284 (546)
T ss_pred HHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccchhhHHHHHHHHHHHHhhHHHHHHh
Confidence 2222232222222221111122222233445555555556665554332 222222334444555666778888899
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCC
Q 000751 1013 LAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSG 1092 (1303)
Q Consensus 1013 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sG 1092 (1303)
.+|.+..+..++.++.++...++..+-. ..... +.+..||++||.|+|++.. --+..||++|++||.|-|+|.+|
T Consensus 285 ilP~l~~AqvA~~kiakle~~~~~a~~~--~~q~~-p~~~~lelrnvrfay~~~~--FhvgPiNl~ikrGelvFliG~NG 359 (546)
T COG4615 285 ILPTLLTAQVAFNKIAKLELAPYKADFP--RPQAF-PDWKTLELRNVRFAYQDNA--FHVGPINLTIKRGELVFLIGGNG 359 (546)
T ss_pred hhhHHHHHHHHHHHHHHhhcCCccccCC--CCCcC-CcccceeeeeeeeccCccc--ceecceeeEEecCcEEEEECCCC
Confidence 9999999999999998776533322111 11111 2366899999999997542 35788999999999999999999
Q ss_pred CChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceEEEccCCccCcccHHHHHHcCCCC-CCHHHHHHHHHHhch
Q 000751 1093 SGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHN-ASEAEVKEAARIANA 1171 (1303)
Q Consensus 1093 SGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~-~~~~ei~~al~~a~l 1171 (1303)
|||||++++|.|+|.|++|+|++||.+++.-+++++|+-++-|.-|-+||+.++ |.+. ++++.+..-++...+
T Consensus 360 sGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel 433 (546)
T COG4615 360 SGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLEL 433 (546)
T ss_pred CcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998754 3333 677777777766555
Q ss_pred HHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHH-hhcCCcEEEEEec
Q 000751 1172 HHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDT-LIMGNKTTILIAH 1250 (1303)
Q Consensus 1172 ~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~-~~~~~~TvI~IaH 1250 (1303)
....+ +.+|-=+. ..||-|||.|+|+--|++-+.+|++|||=-+--||.=.+...+.+-- +...|||++.|||
T Consensus 434 ~~kts-l~d~~fs~-----~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsH 507 (546)
T COG4615 434 AHKTS-LNDGRFSN-----LKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISH 507 (546)
T ss_pred hhhhc-ccCCcccc-----cccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEec
Confidence 44332 22332222 36999999999999999999999999999999999999998887653 3334899999999
Q ss_pred CchhHhhcCEEEEEeCCEEEEe
Q 000751 1251 RAAMMRHVDNIVVLNGGRIVEE 1272 (1303)
Q Consensus 1251 rl~ti~~~D~Iivl~~G~Ive~ 1272 (1303)
+-.....|||++.|++|+++|.
T Consensus 508 Dd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 508 DDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred CchhhhhHHHHHHHhcCceeec
Confidence 9999999999999999999985
No 153
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-43 Score=370.52 Aligned_cols=198 Identities=33% Similarity=0.513 Sum_probs=176.8
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.+++++|+.+|++ ..||+||||+|++||+|+|+||||||||||++++.|+.+|++|+|.++|.++.... ..+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~-----~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPG-----PDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCC-----CCE
Confidence 4889999999975 35999999999999999999999999999999999999999999999999886554 469
Q ss_pred EEEccCCccCc-ccHHHHHHcCCCCC------CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHH
Q 000751 1133 GLVQQEPIIFS-TTIRENIIYARHNA------SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIAR 1205 (1303)
Q Consensus 1133 ~~VpQdp~LF~-gTIreNl~~g~~~~------~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLAR 1205 (1303)
+||+|++.||+ -||+||+.++.... ..+...+.++.+||.+|-+..|. +||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHHH
Confidence 99999999999 59999999875421 23467888999999999888875 89999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCch-hHhhcCEEEEEeC--CEE
Q 000751 1206 VVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAA-MMRHVDNIVVLNG--GRI 1269 (1303)
Q Consensus 1206 Allr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~-ti~~~D~Iivl~~--G~I 1269 (1303)
||+.+|+|||||||.+|||+.|...+|+.+.+..++ ++||++|||+++ .+.-+|||+||.+ |+|
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 999999999999999999999999999998876433 689999999997 4677999999999 555
No 154
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.9e-43 Score=350.75 Aligned_cols=209 Identities=27% Similarity=0.481 Sum_probs=188.7
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCH---HHhhc
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNL---RWLRN 1130 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~---~~lR~ 1130 (1303)
|+|+||+.+|++. .++|+||||+|++||.+-++|||||||||++++|++...|++|+|.++|.|+..+.- -.||+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 8999999999876 359999999999999999999999999999999999999999999999999988765 46899
Q ss_pred ceEEEccCCccCc-ccHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHH
Q 000751 1131 HLGLVQQEPIIFS-TTIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAI 1203 (1303)
Q Consensus 1131 ~i~~VpQdp~LF~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaL 1203 (1303)
+||+|+||.-|+. -|+.||+.|.-. ..+ .+++.++++.+||.+-...+|. .|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHH
Confidence 9999999998875 599999988632 122 3567889999999999999986 799999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhc-CEEEEEeCCEEEEecCh
Q 000751 1204 ARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHV-DNIVVLNGGRIVEEGTH 1275 (1303)
Q Consensus 1204 ARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~-D~Iivl~~G~Ive~Gt~ 1275 (1303)
|||++.+|++||-||||-+||+++...|++.+.+.-..|.|||+.||+.+.+..+ -|++.+++|+++....+
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 9999999999999999999999999999999998766689999999999999875 68999999999976554
No 155
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-43 Score=363.66 Aligned_cols=213 Identities=30% Similarity=0.428 Sum_probs=185.6
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCC---HHHHh
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLK---LEWLR 384 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 384 (1303)
.|+++||+..|| +++.+|+||||+|++||++||+||||||||||++.|.|+.+|++|+|.++|.++...+ ...+|
T Consensus 3 ~i~~~nl~k~yp--~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYP--GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecC--CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 489999999998 3568999999999999999999999999999999999999999999999999998887 55678
Q ss_pred cceEEEeccccccc-HhHHHHHhcCC-C-----------CCHHHH---HHHHHHhcchHHHHhcccccCccccCCCCCCC
Q 000751 385 SQIGLVTQEPALLS-LSIRDNIAYGR-D-----------ATLDQI---EEAAKIAHAHTFISSLEKGYETQVGRAGLALT 448 (1303)
Q Consensus 385 ~~i~~v~Q~~~l~~-~ti~~ni~~~~-~-----------~~~~~~---~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LS 448 (1303)
++||+++|++-|.. .||.+|++.|+ . .+.++- .++++..++.+. .-.+..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~-----------A~qra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDK-----------AYQRASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHH-----------HHHHhccCC
Confidence 89999999999885 79999999885 2 233333 333344444333 345667899
Q ss_pred hHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEeCceEeec
Q 000751 449 EEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEM 525 (1303)
Q Consensus 449 gGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~ 525 (1303)
|||+||++|||||+++|+|++-|||+|+|||.+.+.+++.|++.. .|.|+|+.-|.++.++ .||||+-|++|+|+.+
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 999999999999999999999999999999999999999998764 6899999999999986 4999999999999999
Q ss_pred cChHHHhh
Q 000751 526 GTHDELLA 533 (1303)
Q Consensus 526 g~~~~l~~ 533 (1303)
|+.+|+-+
T Consensus 230 g~~~el~~ 237 (258)
T COG3638 230 GPASELTD 237 (258)
T ss_pred CChhhhhH
Confidence 99999643
No 156
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=5.2e-43 Score=403.64 Aligned_cols=223 Identities=28% Similarity=0.431 Sum_probs=189.9
Q ss_pred EEEEEEEEEcCCCC-CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHH---Hh
Q 000751 309 IEFRNVYFSYLSRP-EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW---LR 384 (1303)
Q Consensus 309 i~~~~v~f~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~~ 384 (1303)
|+++||+++|++.+ ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++... +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 247999999999999999999999999999999999999999999999999999887654 57
Q ss_pred cceEEEeccccccc-HhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHH
Q 000751 385 SQIGLVTQEPALLS-LSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLS 456 (1303)
Q Consensus 385 ~~i~~v~Q~~~l~~-~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqria 456 (1303)
++|+||+|++.+|. .|++||+.++. ..+. +++.++++..++.+... .....||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~-----------~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHD-----------SYPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHH
Confidence 89999999999995 79999999863 2232 33455566666554433 344689999999999
Q ss_pred HHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHhh
Q 000751 457 IARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 457 lARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
|||||+.+|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+++++..
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999988753 7999999999999865 99999999999999999999976
Q ss_pred cC--hhHHHHH
Q 000751 534 TG--DLYAELL 542 (1303)
Q Consensus 534 ~~--~~~~~~~ 542 (1303)
.. ..++++.
T Consensus 231 ~p~~~~~~~~~ 241 (343)
T TIGR02314 231 HPKTPLAQKFI 241 (343)
T ss_pred CCCcHHHHHHH
Confidence 42 3344444
No 157
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-42 Score=393.51 Aligned_cols=219 Identities=29% Similarity=0.490 Sum_probs=193.1
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+++|++....++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999743223599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEccCC--ccCcccHHHHHHcCCCC--CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHH
Q 000751 1133 GLVQQEP--IIFSTTIRENIIYARHN--AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIA 1204 (1303)
Q Consensus 1133 ~~VpQdp--~LF~gTIreNl~~g~~~--~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLA 1204 (1303)
+||+|+| .++..||+|||.++... .+ ++.+.++++.+++.++.+..| .+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 35678999999876321 22 245677888888877665544 48999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1205 RVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1205 RAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
|||+++|+||||||||++||+.+.+.+.+.|++..++ ++|+|+|||+++.+..||+|++|++|++++.|+++++....
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 231 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSRG 231 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcCh
Confidence 9999999999999999999999999999999987543 69999999999988889999999999999999999987653
No 158
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-43 Score=360.73 Aligned_cols=216 Identities=31% Similarity=0.507 Sum_probs=190.0
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCC---HHHhh
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYN---LRWLR 1129 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~---~~~lR 1129 (1303)
.|+++||+.+||+.. .+|+||||+|++||.|||+|+||||||||++.|.|+.+|++|+|.++|.++..+. ++.+|
T Consensus 3 ~i~~~nl~k~yp~~~--~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPGGH--QALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCCCc--eeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 489999999998543 5999999999999999999999999999999999999999999999999999887 67788
Q ss_pred cceEEEccCCccCc-ccHHHHHHcCCCC-----------CCH---HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCC
Q 000751 1130 NHLGLVQQEPIIFS-TTIRENIIYARHN-----------ASE---AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLT 1194 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~-gTIreNl~~g~~~-----------~~~---~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1194 (1303)
++||+|+|+|.|-+ -|+.+|+..|+-. .+. ....+|++.+|+.+..- .+..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~-----------qra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAY-----------QRASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHH-----------HHhccCC
Confidence 99999999999886 5999999876432 233 34567788888877653 2345899
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHh-hcCEEEEEeCCEEEEe
Q 000751 1195 PGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEE 1272 (1303)
Q Consensus 1195 gGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~ 1272 (1303)
|||+||++|||||.++|+|+|-|||+|+|||.+.+.|++.|++..+ +|.|+|+.-|.++..+ .||||+-|++|+|+-.
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 9999999999999999999999999999999999999999997643 3689999999999875 5999999999999999
Q ss_pred cChHHHhhc
Q 000751 1273 GTHDSLLAK 1281 (1303)
Q Consensus 1273 Gt~~eLl~~ 1281 (1303)
|++.||-+.
T Consensus 230 g~~~el~~~ 238 (258)
T COG3638 230 GPASELTDE 238 (258)
T ss_pred CChhhhhHH
Confidence 999996543
No 159
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-42 Score=359.71 Aligned_cols=224 Identities=29% Similarity=0.512 Sum_probs=192.2
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHH---Hhh
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLR---WLR 1129 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~---~lR 1129 (1303)
.|++++|+++|.++ .||+||||+|++||.+||+|+||||||||++++.|+..|++|+|.|+|.|+.+++.+ .+|
T Consensus 8 ~I~vr~v~~~fG~~---~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 8 LIEVRGVTKSFGDR---VILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred eEEEeeeeeecCCE---EEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 69999999999654 499999999999999999999999999999999999999999999999999999874 569
Q ss_pred cceEEEccCCccCcc-cHHHHHHcCCC---CCCHHHHHH----HHHHhchHHH-HHhCCCCcccccCCCCCCCChHHHHH
Q 000751 1130 NHLGLVQQEPIIFST-TIRENIIYARH---NASEAEVKE----AARIANAHHF-ISSLPHGYDTHVGMRGVDLTPGQKQR 1200 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~g-TIreNl~~g~~---~~~~~ei~~----al~~a~l~~~-I~~lp~Gldt~vge~G~~LSgGQrQR 1200 (1303)
+++|+++|+--||+. ||+||+.|.-. ..+++++.+ .++.+||... .+.+| ..||||.+.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHHH
Confidence 999999999999975 99999998632 234444443 4566666655 33344 4799999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHH
Q 000751 1201 IAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSL 1278 (1303)
Q Consensus 1201 laLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eL 1278 (1303)
.|||||+.-+|+|+++|||||+|||-+...+-+.|+++... +.|+|+|||+++++. .||||+++.+|+|+..|+++||
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 99999999999999999999999999999988888766332 689999999998765 5899999999999999999999
Q ss_pred hhcCc-hhHHHHh
Q 000751 1279 LAKNG-LYVRLMQ 1290 (1303)
Q Consensus 1279 l~~~g-~y~~l~~ 1290 (1303)
.+.+. ..++.++
T Consensus 234 ~~sd~P~v~qf~~ 246 (263)
T COG1127 234 LASDDPWVRQFFN 246 (263)
T ss_pred HhCCCHHHHHHhc
Confidence 98744 4455444
No 160
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=7e-43 Score=386.03 Aligned_cols=212 Identities=32% Similarity=0.526 Sum_probs=184.9
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccc-----cCCccEEEECCeeCCCCC--HH
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFY-----DPVAGQVLLDGRDLKLYN--LR 1126 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~-----~~~~G~I~idG~di~~~~--~~ 1126 (1303)
|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|++ +|.+|+|.++|.++.+.+ ..
T Consensus 1 i~~~~l~~~~~~~---~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGDK---HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCCc---eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 5789999999753 4999999999999999999999999999999999999 999999999999998877 66
Q ss_pred HhhcceEEEccCCccCcccHHHHHHcCCCC---CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHH
Q 000751 1127 WLRNHLGLVQQEPIIFSTTIRENIIYARHN---AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQ 1199 (1303)
Q Consensus 1127 ~lR~~i~~VpQdp~LF~gTIreNl~~g~~~---~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1199 (1303)
.+|++++|+||++.+|+.|++||+.++... .. ++++.++++..++.+.....++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 788999999999999988999999875321 11 2456677777777655443321 3589999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHH
Q 000751 1200 RIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSL 1278 (1303)
Q Consensus 1200 RlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eL 1278 (1303)
|++||||++++|++|||||||++||+.+.+.+.+.|++...+ +|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 999999999999999999999999999999999999988665 89999999999875 5999999999999999998764
No 161
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-42 Score=397.17 Aligned_cols=221 Identities=23% Similarity=0.428 Sum_probs=188.3
Q ss_pred cEEEEEEEEEcCCCC--CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCC-------
Q 000751 308 NIEFRNVYFSYLSRP--EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNL------- 378 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~------- 378 (1303)
.|+++|++|+|++.. +.++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+.
T Consensus 21 ~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~ 100 (320)
T PRK13631 21 ILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELI 100 (320)
T ss_pred eEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccccc
Confidence 599999999996321 24699999999999999999999999999999999999999999999999998653
Q ss_pred ---------CHHHHhcceEEEeccc--ccccHhHHHHHhcCC---CCCHHHHHHHHHHhcchHHHHhcccccC-ccccCC
Q 000751 379 ---------KLEWLRSQIGLVTQEP--ALLSLSIRDNIAYGR---DATLDQIEEAAKIAHAHTFISSLEKGYE-TQVGRA 443 (1303)
Q Consensus 379 ---------~~~~~~~~i~~v~Q~~--~l~~~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~vg~~ 443 (1303)
+...+|++|+||+|+| .+|+.||+|||.++. ..+.++..+. +.+.++.+ |++ ...++.
T Consensus 101 ~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~ 173 (320)
T PRK13631 101 TNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKL-----AKFYLNKM--GLDDSYLERS 173 (320)
T ss_pred ccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHH-----HHHHHHHc--CCChhHhcCC
Confidence 3467889999999998 799999999999874 2343333221 12334444 554 456778
Q ss_pred CCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccc-cccCEEEEEeCce
Q 000751 444 GLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLI-RNADYIAVMDEGR 521 (1303)
Q Consensus 444 g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~-~~~d~i~~l~~G~ 521 (1303)
+.+||||||||++|||||+++|+||||||||++||+.+++.+.+.|.++. +++|+|+|||+++.+ ..||+|++|++|+
T Consensus 174 ~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~ 253 (320)
T PRK13631 174 PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGK 253 (320)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 88999999999999999999999999999999999999999999998764 589999999999987 5699999999999
Q ss_pred EeeccChHHHhhcC
Q 000751 522 LFEMGTHDELLATG 535 (1303)
Q Consensus 522 i~~~g~~~~l~~~~ 535 (1303)
+++.|+++++....
T Consensus 254 i~~~g~~~~~~~~~ 267 (320)
T PRK13631 254 ILKTGTPYEIFTDQ 267 (320)
T ss_pred EEEeCCHHHHhcCH
Confidence 99999999987643
No 162
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=6.2e-39 Score=379.67 Aligned_cols=475 Identities=16% Similarity=0.153 Sum_probs=343.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccc---CChhhHHHHHHhhHHHHHHHHH
Q 000751 773 KWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEE---NSADTLSMRLANDATFVRAAFS 849 (1303)
Q Consensus 773 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~---~~~g~l~~rl~~D~~~i~~~~~ 849 (1303)
..+.+|.+++.+..+....+.|+......++..-+-+.+.++-+...-.|+.... +.....-+|+..|+...-+...
T Consensus 87 ~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~ 166 (604)
T COG4178 87 QQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTL 166 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHH
Confidence 3456666667777777777888888889999999999999998887755543322 2234566899999988777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 850 NRLSIFIQDSAAVIVAVIIGML---------------LEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASL 914 (1303)
Q Consensus 850 ~~l~~~i~~~~~~i~~~~~~~~---------------~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (1303)
.....++.++.+++.-..++.- +...+.++++..+++-.+......+.+.+..-+..+.++..+.
T Consensus 167 ~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~ 246 (604)
T COG4178 167 DLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRY 246 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHH
Confidence 6555666666655544444331 2222333333334443444444444454555566667777777
Q ss_pred HHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCccCHHHHH
Q 000751 915 VLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTAL 994 (1303)
Q Consensus 915 ~~~e~l~gi~tI~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~ 994 (1303)
.+...-++.+.|-.|+-|+...++.+...........+..........+.....++...+-+..++.....|.+++|+++
T Consensus 247 ~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lm 326 (604)
T COG4178 247 SLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLM 326 (604)
T ss_pred HHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHH
Confidence 78888889999999998887766666555554443332222222222233333333333444445556678999999998
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcCC--CCCCCCCCC--CC---CCCCcccEEEEeeEEECCCCC
Q 000751 995 KEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVP--KIDPDDSSA--VK---PPNVYGSIELKNVDFCYPSRP 1067 (1303)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~--~~---~~~~~g~I~~~~Vsf~Y~~~~ 1067 (1303)
..-.++.....+++......+.+..-.+...|+.++.+... +.++..... .. .......|+|+|++..-|+..
T Consensus 327 qa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~~ 406 (604)
T COG4178 327 QAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDGQ 406 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCCC
Confidence 88888888777777777777777777777777766653321 111111101 00 000146799999999988654
Q ss_pred CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceEEEccCCccCcccHH
Q 000751 1068 EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIR 1147 (1303)
Q Consensus 1068 ~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~VpQdp~LF~gTIr 1147 (1303)
+.|+++||+|+|||.+-|.|+||||||||+++|.|+++-.+|+|..-.. +.+-|+||.|++-.||+|
T Consensus 407 --~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~-----------~~~lflpQ~PY~p~GtLr 473 (604)
T COG4178 407 --TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPAD-----------SALLFLPQRPYLPQGTLR 473 (604)
T ss_pred --eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCCC-----------CceEEecCCCCCCCccHH
Confidence 5899999999999999999999999999999999999999999866511 358999999999999999
Q ss_pred HHHHcCCCC--CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCH
Q 000751 1148 ENIIYARHN--ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIES 1225 (1303)
Q Consensus 1148 eNl~~g~~~--~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~ 1225 (1303)
|-|+|++.. .+|+++.++|.+|+|.++++++.+-- .-..-||+|||||||+||.++++|++++|||||||||+
T Consensus 474 e~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~~-----~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe 548 (604)
T COG4178 474 EALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEED-----RWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDE 548 (604)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhccC-----cHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccCh
Confidence 999998764 78999999999999999999975322 24557999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeC
Q 000751 1226 ESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNG 1266 (1303)
Q Consensus 1226 ~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~ 1266 (1303)
++|..+.+.+++... +.|+|.|+||.....-.++.+-+++
T Consensus 549 ~~e~~l~q~l~~~lp-~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 549 ETEDRLYQLLKEELP-DATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred HHHHHHHHHHHhhCC-CCEEEEeccchhhHHHHhhheeecc
Confidence 999999999998765 5999999999988877777666543
No 163
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=3e-42 Score=379.28 Aligned_cols=218 Identities=42% Similarity=0.648 Sum_probs=200.9
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
+|+++|++++|++ .+.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+....++.+
T Consensus 2 ~l~~~~l~~~~~~-~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 2 RIEFRNVSFSYPN-QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred eEEEEEEEEEcCC-CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 5899999999953 235699999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCC
Q 000751 388 GLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPS 466 (1303)
Q Consensus 388 ~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ 466 (1303)
+|++|++.+|..|++||+.++. ..+.+++.+.++..++.+.+..+|.|++|.+......||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999899999999875 445667888889999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeCceEeecc
Q 000751 467 ILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMG 526 (1303)
Q Consensus 467 ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g 526 (1303)
+|||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999887678999999999988889999999999998754
No 164
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.8e-42 Score=385.45 Aligned_cols=210 Identities=20% Similarity=0.334 Sum_probs=169.0
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.+++.+|+|.|+.... +.++++++.+..-.++++||++|+||||+++++.+-..|..|.+-+.+ |.+|
T Consensus 362 ~l~i~~V~f~y~p~~y-~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~ri 429 (582)
T KOG0062|consen 362 NLRISYVAFEYTPSEY-QWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLRI 429 (582)
T ss_pred eeEEEeeeccCCCcch-hhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------ccee
Confidence 5899999999975543 689999999999999999999999999999999999999999998876 4789
Q ss_pred EEEccCCccC-cccH--HHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhc
Q 000751 1133 GLVQQEPIIF-STTI--RENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLK 1209 (1303)
Q Consensus 1133 ~~VpQdp~LF-~gTI--reNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr 1209 (1303)
+|-.|..+=| +-.+ -|-+.-..|..+++|+++.|...|+...+..-+ + ..||||||-|+++|-....
T Consensus 430 ~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~s------i----~~LSGGQKsrvafA~~~~~ 499 (582)
T KOG0062|consen 430 KYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQS------I----ASLSGGQKSRVAFAACTWN 499 (582)
T ss_pred cchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhcc------c----cccCCcchhHHHHHHHhcC
Confidence 9999976533 2222 111111233458999999998887755443221 1 3699999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEEEEe-cChHHHhhcCchhHH
Q 000751 1210 NAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRIVEE-GTHDSLLAKNGLYVR 1287 (1303)
Q Consensus 1210 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~-Gt~~eLl~~~g~y~~ 1287 (1303)
+|.+|+|||||..||.++-..+-++|+.. +.-||+|||+.+.+.. |+.++|.++|+|.-. |+ ...|.+
T Consensus 500 ~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~ieg~-------~~~yKk 569 (582)
T KOG0062|consen 500 NPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEEFISSLCKELWVVEDGKVTPIEGG-------IDKYKK 569 (582)
T ss_pred CCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHHHHhhcCceeEEEcCCcEEeeecc-------HHHHHH
Confidence 99999999999999999999999999875 3589999999999875 999999999999762 22 124666
Q ss_pred HHhhhhh
Q 000751 1288 LMQPHYG 1294 (1303)
Q Consensus 1288 l~~~~~~ 1294 (1303)
+...+..
T Consensus 570 l~~~e~~ 576 (582)
T KOG0062|consen 570 LLGAELR 576 (582)
T ss_pred HHHHHHh
Confidence 6665543
No 165
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=2.4e-42 Score=381.55 Aligned_cols=219 Identities=47% Similarity=0.807 Sum_probs=199.6
Q ss_pred CcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhh
Q 000751 1050 VYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLR 1129 (1303)
Q Consensus 1050 ~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR 1129 (1303)
..+.|+++|++++|+++...++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++...+...+|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 45789999999999754223599999999999999999999999999999999999999999999999999888888888
Q ss_pred cceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhc
Q 000751 1130 NHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLK 1209 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr 1209 (1303)
++++|+||+|.+|++|++||+.++.......++.+..+..+++++++.+|.|+++.+.....+||||||||++||||+++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999998754444556666677778899999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEE
Q 000751 1210 NAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRI 1269 (1303)
Q Consensus 1210 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~I 1269 (1303)
+|++|||||||++||+++.+.+.+.|++... ++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPE-RRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcC-CCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999999998754 5899999999999989999999999974
No 166
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=3e-39 Score=382.39 Aligned_cols=464 Identities=15% Similarity=0.124 Sum_probs=352.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCchh------HHHHHHhhHHHHHHHHHHHH
Q 000751 36 IVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGD------IVSQVLSDVLLIQSALSEKV 109 (1303)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~G~------l~sr~~~Dv~~i~~~~~~~~ 109 (1303)
+..+++....+...+.++......+.-..+-+.+.++.+.....|+.. ..|. .=.|+..|+..+-+.-....
T Consensus 92 f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~--~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~ 169 (604)
T COG4178 92 FAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLA--QAGGIGLIDNPDQRIQEDIRNFTETTLDLS 169 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH--hcccccCCCChHHhHHHHHHHHHhhHHHHH
Confidence 333444444555556666555555555666667777777777444443 3332 23799999998888777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHh---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000751 110 GNYIHNMATFFSGLAIAFVNC---------------WQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAE 174 (1303)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~---------------~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (1303)
..++.++++.+...+++.-++ ..+..++++.+++..++..++++.+.+.+-+.++..+.......
T Consensus 170 ~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lv 249 (604)
T COG4178 170 FGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLV 249 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHH
Confidence 667776666555555554211 12223333344444455557777777888888888888888888
Q ss_pred HHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHH
Q 000751 175 QAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTAL 254 (1303)
Q Consensus 175 e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~~~g~l~~~~ 254 (1303)
..-++...|-.|+.|+.++++.++......+...+..........+......++.++-+.++......|+++.|.++...
T Consensus 250 rv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmqa~ 329 (604)
T COG4178 250 RVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQAV 329 (604)
T ss_pred HHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHHHH
Confidence 89999999999999999999888777766665544444443344444444555555555667777889999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC------CCCCCCCCCC---CCCCCccEEEEEEEEEcCCCCCCC
Q 000751 255 FAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRS------SSTTNYDGNT---LPSVHGNIEFRNVYFSYLSRPEIP 325 (1303)
Q Consensus 255 ~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~------~~~~~~~~~~---~~~~~~~i~~~~v~f~y~~~~~~~ 325 (1303)
..+......+..+...+..+..-++...|+.++.+.- .+........ ....+..|+++|++..-|+ +..
T Consensus 330 ~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~--~~~ 407 (604)
T COG4178 330 GAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPD--GQT 407 (604)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCC--CCe
Confidence 8888888889999999999999999999999886321 1111110000 0111467999999999874 347
Q ss_pred cccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHH
Q 000751 326 ILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNI 405 (1303)
Q Consensus 326 ~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni 405 (1303)
.|++.||++++|+.+.|.||||||||||++.|+|+++--+|+|..-.. ..+-|+||.|++-.||.||-|
T Consensus 408 ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~-----------~~~lflpQ~PY~p~GtLre~l 476 (604)
T COG4178 408 LLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPAD-----------SALLFLPQRPYLPQGTLREAL 476 (604)
T ss_pred eeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCCC-----------CceEEecCCCCCCCccHHHHH
Confidence 999999999999999999999999999999999999999999876521 358999999999999999999
Q ss_pred hcCC---CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHH
Q 000751 406 AYGR---DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAE 482 (1303)
Q Consensus 406 ~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~ 482 (1303)
+|.+ +++++++.+++.+|+|.++++++.+-. .-..-||+|||||+|+||.++++|++++|||+|||||+++|
T Consensus 477 ~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~~-----~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e 551 (604)
T COG4178 477 CYPNAAPDFSDAELVAVLHKVGLGDLAERLDEED-----RWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETE 551 (604)
T ss_pred hCCCCCCCCChHHHHHHHHHcCcHHHHHHHhccC-----cHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHH
Confidence 9986 388999999999999999999975422 24457999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeC
Q 000751 483 RAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDE 519 (1303)
Q Consensus 483 ~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~ 519 (1303)
..+.+.+++...+.|+|-|.||.......++.+-+++
T Consensus 552 ~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 552 DRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred HHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeecc
Confidence 9999999999899999999999998877777665543
No 167
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-42 Score=371.60 Aligned_cols=209 Identities=27% Similarity=0.480 Sum_probs=183.3
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.|+++|++|+|.+ + ++|+||||++++|++++|+||||||||||+|+|+|+..|.+|+|.+.|.+.+.... +.+|
T Consensus 4 ~i~v~nl~v~y~~--~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGN--R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECC--E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 5899999999952 3 69999999999999999999999999999999999999999999999988765432 4689
Q ss_pred EEEeccc---ccccHhHHHHHhcCCC-----------CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHH
Q 000751 388 GLVTQEP---ALLSLSIRDNIAYGRD-----------ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKI 453 (1303)
Q Consensus 388 ~~v~Q~~---~l~~~ti~~ni~~~~~-----------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkq 453 (1303)
|||||.. |-|..||+|-+.+|+- .+.+++.+|++.+++.++..+ .+ ..|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-------~i----~~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-------QI----GELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-------cc----cccCcHHHH
Confidence 9999965 5688999999999841 134789999999998876532 33 369999999
Q ss_pred HHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 454 KLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML-GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 454 rialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~-~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
|+.|||||+++|++|+|||||+++|+.++..+.+.|.++++ |+||++|||+++.+. .+|+|+.|+ ++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 99999999999999999999999999999999999998864 899999999999876 599999995 567889999998
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
...
T Consensus 226 ~~~ 228 (254)
T COG1121 226 LTE 228 (254)
T ss_pred cCH
Confidence 764
No 168
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-42 Score=361.53 Aligned_cols=216 Identities=26% Similarity=0.426 Sum_probs=182.9
Q ss_pred cEEEEEEEEEcCCCC-CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCC-CHHHHhc
Q 000751 308 NIEFRNVYFSYLSRP-EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNL-KLEWLRS 385 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~-~~~~~~~ 385 (1303)
.++++|+++.|+... -.++|+||||+|.+||+++|||+||||||||+++|+|+.+|++|+|.++|.++... .....++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 478999999996321 01499999999999999999999999999999999999999999999999776543 3446788
Q ss_pred ceEEEeccccc-cc--HhHHHHHh----cC-CCCCHHHHHHHHHHhcchH-HHHhcccccCccccCCCCCCChHHHHHHH
Q 000751 386 QIGLVTQEPAL-LS--LSIRDNIA----YG-RDATLDQIEEAAKIAHAHT-FISSLEKGYETQVGRAGLALTEEQKIKLS 456 (1303)
Q Consensus 386 ~i~~v~Q~~~l-~~--~ti~~ni~----~~-~~~~~~~~~~~~~~~~~~~-~i~~l~~g~~t~vg~~g~~LSgGqkqria 456 (1303)
.|-+|+|||.- +| -||++-|. .. .+-.+.++.++++..++.+ +..+.| ..||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 99999999962 22 46655554 32 2344566888888888854 445555 479999999999
Q ss_pred HHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCC--CeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHhh
Q 000751 457 IARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLG--RSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 457 lARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~--~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
|||||.-+|++||||||||+||+.....|.+.+.+++++ -|.|+|||+++.+.+ ||||+||++|+|+|.++.+++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 999999999999999999999999999999999888764 599999999999986 99999999999999999999887
Q ss_pred c
Q 000751 534 T 534 (1303)
Q Consensus 534 ~ 534 (1303)
.
T Consensus 232 ~ 232 (252)
T COG1124 232 H 232 (252)
T ss_pred C
Confidence 6
No 169
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-42 Score=381.18 Aligned_cols=222 Identities=32% Similarity=0.508 Sum_probs=190.7
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++|++++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~~---~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFGK---EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCCe---eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 48999999999643 499999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCCccCcccHHHHHHcCCCC--CCHHHHHHHHHHhchH-HHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhc
Q 000751 1133 GLVQQEPIIFSTTIRENIIYARHN--ASEAEVKEAARIANAH-HFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLK 1209 (1303)
Q Consensus 1133 ~~VpQdp~LF~gTIreNl~~g~~~--~~~~ei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr 1209 (1303)
+|+||+|.+|+.|++||+.++... ..++++.+.++..++. +.. ......||||||||++||||+++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~~LS~G~~qrl~la~al~~ 148 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYA-----------TRDVKNLSGGEAQRVSIARTLAN 148 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHh-----------hCCcccCCHHHHHHHHHHHHHhc
Confidence 999999999999999999875321 1234555666665553 222 23455899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhcCc-hhH
Q 000751 1210 NAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAKNG-LYV 1286 (1303)
Q Consensus 1210 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~~g-~y~ 1286 (1303)
+|++|||||||++||+.+.+.+.+.|++..+ .++|+|++||+++.+. .||+|++|++|++++.|+++++..... .|.
T Consensus 149 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~ 228 (241)
T PRK14250 149 NPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVT 228 (241)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHH
Confidence 9999999999999999999999999998754 2689999999999876 599999999999999999999986532 344
Q ss_pred HH
Q 000751 1287 RL 1288 (1303)
Q Consensus 1287 ~l 1288 (1303)
+.
T Consensus 229 ~~ 230 (241)
T PRK14250 229 KL 230 (241)
T ss_pred HH
Confidence 43
No 170
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-42 Score=388.54 Aligned_cols=214 Identities=31% Similarity=0.549 Sum_probs=189.9
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKDG--TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCCC--CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 48999999999632 2599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEccCC--ccCcccHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHH
Q 000751 1133 GLVQQEP--IIFSTTIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIA 1204 (1303)
Q Consensus 1133 ~~VpQdp--~LF~gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLA 1204 (1303)
+||||+| .+|..|++||+.++.. ..+ ++++.++++.+++.++..+.|. .||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~-----------~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPPY-----------HLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCChh-----------hCCHHHHHHHHHH
Confidence 9999998 6888999999987632 122 2456778888888776655542 7999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHh
Q 000751 1205 RVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLL 1279 (1303)
Q Consensus 1205 RAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl 1279 (1303)
|||+++|++|||||||++||+.+...+.+.|++...+++|+|++||+++.+ ..||+|++|++|++++.|+++++.
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 999999999999999999999999999999998755469999999999987 569999999999999999987653
No 171
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-42 Score=391.58 Aligned_cols=214 Identities=29% Similarity=0.538 Sum_probs=193.8
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+.+|.+ ..+++|+||+|++||.++++|||||||||++++|.||..|++|+|.+||.|+..++++ ++.|
T Consensus 5 ~l~i~~v~k~yg~---~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 5 ALEIRNVSKSFGD---FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred eEEEEeeeeecCC---eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 6999999999972 3699999999999999999999999999999999999999999999999999999886 4799
Q ss_pred EEEccCCccCc-ccHHHHHHcCCC---CCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHH
Q 000751 1133 GLVQQEPIIFS-TTIRENIIYARH---NASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIA 1204 (1303)
Q Consensus 1133 ~~VpQdp~LF~-gTIreNl~~g~~---~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLA 1204 (1303)
++|+|+..||+ .||+|||.||.. ...+ +.+.++++.+++.++-.+.|. +|||||+||+|||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~-----------qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPH-----------QLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChh-----------hhChHHHHHHHHH
Confidence 99999999997 699999999965 1122 367889999999888777664 8999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCch-hHhhcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1205 RVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAA-MMRHVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1205 RAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~-ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
|||..+|++||||||.||||.+-...++..+++..++ +.|.|+|||+-+ .+..+|||+||++|+|...|+|+|+..+.
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 9999999999999999999999999999999876433 689999999875 67889999999999999999999999874
No 172
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-42 Score=398.38 Aligned_cols=217 Identities=32% Similarity=0.531 Sum_probs=185.9
Q ss_pred EEEEeeEEECCCCC-CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHH---hh
Q 000751 1054 IELKNVDFCYPSRP-EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRW---LR 1129 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~---lR 1129 (1303)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997311 246999999999999999999999999999999999999999999999999999887654 57
Q ss_pred cceEEEccCCccCc-ccHHHHHHcCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHH
Q 000751 1130 NHLGLVQQEPIIFS-TTIRENIIYARH--NASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIA 1202 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~-gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1202 (1303)
++|+||||++.+|+ .|++||+.++.. ..+. +++.++++..++.++.. ....+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKAD-----------RYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHH
Confidence 89999999999986 699999987532 1222 23455555555544433 233589999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHHHhh
Q 000751 1203 IARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDSLLA 1280 (1303)
Q Consensus 1203 LARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~eLl~ 1280 (1303)
|||||+++|+|||||||||+||+.+.+.+.+.|++..++ ++|+|++||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999999999999987543 6899999999998765 99999999999999999999986
Q ss_pred c
Q 000751 1281 K 1281 (1303)
Q Consensus 1281 ~ 1281 (1303)
.
T Consensus 231 ~ 231 (343)
T PRK11153 231 H 231 (343)
T ss_pred C
Confidence 5
No 173
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-42 Score=390.30 Aligned_cols=219 Identities=31% Similarity=0.516 Sum_probs=186.0
Q ss_pred EEEEeeEEECCCCC--CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCC--HHHhh
Q 000751 1054 IELKNVDFCYPSRP--EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYN--LRWLR 1129 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~--~~~lR 1129 (1303)
|+++||+++|++.. ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997422 135999999999999999999999999999999999999999999999999998754 45788
Q ss_pred cceEEEccCC--ccCcccHHHHHHcCCC--CCCHH----HHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHH
Q 000751 1130 NHLGLVQQEP--IIFSTTIRENIIYARH--NASEA----EVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRI 1201 (1303)
Q Consensus 1130 ~~i~~VpQdp--~LF~gTIreNl~~g~~--~~~~~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1201 (1303)
++|+||||+| .+|+.|++|||.++.. ..+.+ ++.++++.+++. +.+........||||||||+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qrv 153 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRRV 153 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHHH
Confidence 9999999998 5789999999987532 23333 345566665553 00223344568999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHh
Q 000751 1202 AIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLL 1279 (1303)
Q Consensus 1202 aLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl 1279 (1303)
+|||||+.+|+||||||||++||+.+...+.+.|+++.++ ++|+|+|||+++.+ ..||+|++|++|++++.|++++++
T Consensus 154 ~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 154 AIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999987543 68999999999987 469999999999999999999987
Q ss_pred hc
Q 000751 1280 AK 1281 (1303)
Q Consensus 1280 ~~ 1281 (1303)
+.
T Consensus 234 ~~ 235 (287)
T PRK13637 234 KE 235 (287)
T ss_pred hC
Confidence 53
No 174
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-42 Score=389.44 Aligned_cols=217 Identities=22% Similarity=0.428 Sum_probs=184.9
Q ss_pred EEEEeeEEECCCCCC--cceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCC----CCHHH
Q 000751 1054 IELKNVDFCYPSRPE--VLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKL----YNLRW 1127 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~--~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~----~~~~~ 1127 (1303)
|+++||+|+|+.... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 789999999974321 259999999999999999999999999999999999999999999999999863 34567
Q ss_pred hhcceEEEccCC--ccCcccHHHHHHcCCCC--CCHH----HHHHHHHHhchH-HHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1128 LRNHLGLVQQEP--IIFSTTIRENIIYARHN--ASEA----EVKEAARIANAH-HFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1128 lR~~i~~VpQdp--~LF~gTIreNl~~g~~~--~~~~----ei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
+|++++||+|+| .+|+.|+.||+.++... .+.+ ++.++++.+++. ++. .....+||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~~LSgGqk 150 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFW-----------EKSPFELSGGQM 150 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhc-----------cCCcccCCHHHH
Confidence 899999999998 79999999999876421 2232 344555555552 222 233458999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++|||||+.+|+||||||||++||+.+.+.+.+.|+++.+.++|+|+|||+++.+ ..||+|++|++|++++.|++++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999988755568999999999977 5699999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+..+
T Consensus 231 ~~~~ 234 (288)
T PRK13643 231 VFQE 234 (288)
T ss_pred HHcC
Confidence 8754
No 175
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-42 Score=397.50 Aligned_cols=215 Identities=26% Similarity=0.469 Sum_probs=190.2
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+++|++. .++|+|+||+|++||.+||+||||||||||+++|.|+.+|++|+|.+||.++.+++.. +++|
T Consensus 3 ~l~i~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDGK--TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCCC--CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 38999999999422 3599999999999999999999999999999999999999999999999999987764 4789
Q ss_pred EEEccCCccCc-ccHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHH
Q 000751 1133 GLVQQEPIIFS-TTIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIAR 1205 (1303)
Q Consensus 1133 ~~VpQdp~LF~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLAR 1205 (1303)
+||+|++.+|+ .|++|||.|+.. ..+ .+++.++++..++.++..+.|. +||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----------~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKPR-----------ELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCChh-----------hCCHHHHHHHHHHH
Confidence 99999999996 599999998743 122 2456788888888877766653 89999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1206 VVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1206 Allr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
||+++|+|||||||||+||+.+...+.+.|++..++ +.|+|+|||+++.+ ..||+|++|++|++++.|++++++++.
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p 226 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKP 226 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCC
Confidence 999999999999999999999999999999987543 68999999999865 569999999999999999999998763
No 176
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-42 Score=382.87 Aligned_cols=218 Identities=28% Similarity=0.464 Sum_probs=190.5
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc---CCccEEEECCeeCCCCCHHHhh
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD---PVAGQVLLDGRDLKLYNLRWLR 1129 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~---~~~G~I~idG~di~~~~~~~lR 1129 (1303)
.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.+.+...+|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999974 259999999999999999999999999999999999985 6899999999999988888889
Q ss_pred cceEEEccCCccCcccHHHHHHcCCC--------CCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHH
Q 000751 1130 NHLGLVQQEPIIFSTTIRENIIYARH--------NASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRI 1201 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~gTIreNl~~g~~--------~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1201 (1303)
++++|+||+|.+|+.|++||+.++.. ...++++.++++.+++.+++.. .....+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHH
Confidence 99999999999999999999987521 1112346677777777555432 23445678999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhh
Q 000751 1202 AIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLA 1280 (1303)
Q Consensus 1202 aLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~ 1280 (1303)
+||||++++|+||||||||++||+.+...+.+.|++... ++|+|+|||+++.+. .||+|++|++|++++.|+++++..
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 999999999999999999999999999999999998754 699999999999775 699999999999999999999986
Q ss_pred c
Q 000751 1281 K 1281 (1303)
Q Consensus 1281 ~ 1281 (1303)
.
T Consensus 231 ~ 231 (246)
T PRK14269 231 N 231 (246)
T ss_pred C
Confidence 4
No 177
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-42 Score=370.33 Aligned_cols=212 Identities=27% Similarity=0.476 Sum_probs=184.7
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCe---ecCCCCHHHHh
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGE---NIKNLKLEWLR 384 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~---~~~~~~~~~~~ 384 (1303)
.|+++|+++.|+ ..++++||||.|+.||.+|+.||||||||||+++|+|+..|++|+|.+||. |.++.. .-.
T Consensus 2 ~i~i~~~~~~~~---~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~--~~~ 76 (345)
T COG1118 2 SIRINNVKKRFG---AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLA--VRD 76 (345)
T ss_pred ceeehhhhhhcc---cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccc--hhh
Confidence 478899999995 457999999999999999999999999999999999999999999999999 555533 334
Q ss_pred cceEEEecccccc-cHhHHHHHhcCCC---------CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHH
Q 000751 385 SQIGLVTQEPALL-SLSIRDNIAYGRD---------ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIK 454 (1303)
Q Consensus 385 ~~i~~v~Q~~~l~-~~ti~~ni~~~~~---------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqr 454 (1303)
++||+|+|+.-|| +.||++||+||.. ....++.+.++.++|...-++.| .+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHH
Confidence 6899999999998 6999999999951 22345667777888776655555 4799999999
Q ss_pred HHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccc-cccCEEEEEeCceEeeccChHHH
Q 000751 455 LSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLI-RNADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 455 ialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~-~~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
+||||||..+|++|+||||+++||++..+.+.+.|++.. -|.|+++|||+.+.+ +.||||++|++|+|...|+++|.
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 999999999999999999999999999999998887764 389999999999876 56999999999999999999999
Q ss_pred hhcC
Q 000751 532 LATG 535 (1303)
Q Consensus 532 ~~~~ 535 (1303)
....
T Consensus 226 ~~~P 229 (345)
T COG1118 226 YDHP 229 (345)
T ss_pred hcCC
Confidence 7654
No 178
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-42 Score=382.17 Aligned_cols=213 Identities=31% Similarity=0.455 Sum_probs=182.3
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCH---HHHhc
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKL---EWLRS 385 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~~~ 385 (1303)
|+++|++++|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFG---GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 47899999995 3469999999999999999999999999999999999999999999999999987664 56788
Q ss_pred ceEEEecccccccH-hHHHHHhcCC----CCCHH----HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHH
Q 000751 386 QIGLVTQEPALLSL-SIRDNIAYGR----DATLD----QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLS 456 (1303)
Q Consensus 386 ~i~~v~Q~~~l~~~-ti~~ni~~~~----~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqria 456 (1303)
.|+||+|++.+|.. |++||+.++. ..+.+ ++.++++..++.++ .......||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGA-----------EDLYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHH
Confidence 99999999999875 9999998763 12332 23444444444332 33444689999999999
Q ss_pred HHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHhh
Q 000751 457 IARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 457 lARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
|||||+.+|+||||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999999999988753 7999999999998764 99999999999999999998865
Q ss_pred cC
Q 000751 534 TG 535 (1303)
Q Consensus 534 ~~ 535 (1303)
..
T Consensus 227 ~~ 228 (235)
T cd03261 227 SD 228 (235)
T ss_pred CC
Confidence 43
No 179
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-42 Score=396.54 Aligned_cols=214 Identities=27% Similarity=0.489 Sum_probs=188.9
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.+.+ +++|
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5999999999964 3599999999999999999999999999999999999999999999999999887653 5789
Q ss_pred EEEccCCccCcc-cHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHH
Q 000751 1133 GLVQQEPIIFST-TIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIAR 1205 (1303)
Q Consensus 1133 ~~VpQdp~LF~g-TIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLAR 1205 (1303)
+||+|++.+|+. |++|||.|+.. ..+ ++++.++++..++.++..+.| ..||||||||+||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----------~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYV-----------DQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999975 99999998742 122 345677788888766654444 479999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1206 VVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1206 Allr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
||+++|+|||||||||+||+.+...+.+.|+++.++ ++|+|+|||+++.+ ..||+|+||++|+|++.|+++++.++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p 228 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQP 228 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 999999999999999999999999999999987543 68999999999876 569999999999999999999998763
No 180
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=7e-42 Score=396.13 Aligned_cols=201 Identities=29% Similarity=0.480 Sum_probs=179.2
Q ss_pred ceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHh----hcceEEEccCCccCc-c
Q 000751 1070 LVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWL----RNHLGLVQQEPIIFS-T 1144 (1303)
Q Consensus 1070 ~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~l----R~~i~~VpQdp~LF~-g 1144 (1303)
.+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|++||.|+..++...+ |++++||+|++.+|+ .
T Consensus 7 ~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~ 86 (363)
T TIGR01186 7 KGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHM 86 (363)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCC
Confidence 59999999999999999999999999999999999999999999999999999998887 789999999999997 5
Q ss_pred cHHHHHHcCCCC--CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeC
Q 000751 1145 TIRENIIYARHN--AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDE 1218 (1303)
Q Consensus 1145 TIreNl~~g~~~--~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDE 1218 (1303)
||+|||.++... .+ .+++.++++.+++.++..+.| .+||||||||++|||||+++|+||||||
T Consensus 87 TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----------~~LSGGq~QRV~lARAL~~~p~iLLlDE 155 (363)
T TIGR01186 87 TILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYP-----------DELSGGMQQRVGLARALAAEPDILLMDE 155 (363)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCCh-----------hhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 999999876321 12 345667777777766655444 4899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1219 ASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1219 aTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
|||+||+.+.+.+++.+.++.+. ++|+|+|||+++.+ +.||+|++|++|++++.|++++++++
T Consensus 156 P~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 156 AFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 99999999999999999876432 68999999999865 66999999999999999999999876
No 181
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-41 Score=386.56 Aligned_cols=218 Identities=31% Similarity=0.507 Sum_probs=193.0
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+++|++. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 48999999999643 23599999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEccCC--ccCcccHHHHHHcCCCC--CCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHH
Q 000751 1133 GLVQQEP--IIFSTTIRENIIYARHN--ASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIA 1204 (1303)
Q Consensus 1133 ~~VpQdp--~LF~gTIreNl~~g~~~--~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLA 1204 (1303)
+|+||+| .+++.|++|||.++... .+. +++.++++.+++.+++...| ..||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 46678999999875321 222 34677788888877776655 37999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1205 RVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1205 RAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
|||+.+|+||||||||++||+.+...+.+.|++..++ ++|+|++||+++.+..||+|++|++|++++.|+++++.+..
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKSG 231 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcCH
Confidence 9999999999999999999999999999999987643 68999999999998899999999999999999999987653
No 182
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-41 Score=385.81 Aligned_cols=220 Identities=27% Similarity=0.462 Sum_probs=192.2
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+++|++....++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999753334599999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCC--ccCcccHHHHHHcCCC--CCCHH----HHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHH
Q 000751 1133 GLVQQEP--IIFSTTIRENIIYARH--NASEA----EVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIA 1204 (1303)
Q Consensus 1133 ~~VpQdp--~LF~gTIreNl~~g~~--~~~~~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLA 1204 (1303)
+||||+| .+++.|+.|||.++.. ..+++ .+.++++.+++.++.... ...||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTRE-----------PARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 9999998 4778899999986532 22333 346677777776655443 347999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcCc
Q 000751 1205 RVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNG 1283 (1303)
Q Consensus 1205 RAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~g 1283 (1303)
|||+++|+||||||||++||+.+.+.+.+.|++..++ ++|+|+|||+++.+..||+|++|++|++++.|+++++++..+
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 232 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFATSE 232 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHH
Confidence 9999999999999999999999999999999987553 689999999999988899999999999999999999986543
No 183
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=8.3e-42 Score=377.21 Aligned_cols=217 Identities=45% Similarity=0.743 Sum_probs=196.9
Q ss_pred CccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhc
Q 000751 306 HGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRS 385 (1303)
Q Consensus 306 ~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 385 (1303)
.+.++++|++++|++..+.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+....++
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 45799999999996432346999999999999999999999999999999999999999999999999988777777888
Q ss_pred ceEEEecccccccHhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccC
Q 000751 386 QIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLN 464 (1303)
Q Consensus 386 ~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~ 464 (1303)
.|+||+|++.+|..|++||+.++. .....++.+......+.++++.+|.|+++.+.+...+||||||||++||||++++
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~~ 168 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRN 168 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999875 3444455555566778899999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeCceE
Q 000751 465 PSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRL 522 (1303)
Q Consensus 465 ~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i 522 (1303)
|++|||||||++||+++...+.+.++++.+++|+|++||+++.+..||+|++|++|++
T Consensus 169 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 169 PQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999999988778999999999999988999999999974
No 184
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.7e-42 Score=380.88 Aligned_cols=214 Identities=32% Similarity=0.499 Sum_probs=183.3
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCC---HHHhhc
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYN---LRWLRN 1130 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~---~~~lR~ 1130 (1303)
|+++||+++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPNG--KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCCc--cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 4789999999742 35999999999999999999999999999999999999999999999999998876 567888
Q ss_pred ceEEEccCCccCc-ccHHHHHHcCCCC--------------CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCCh
Q 000751 1131 HLGLVQQEPIIFS-TTIRENIIYARHN--------------ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTP 1195 (1303)
Q Consensus 1131 ~i~~VpQdp~LF~-gTIreNl~~g~~~--------------~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1195 (1303)
+++|+||++.+|+ .|++||+.++... ..++++.++++..++.+. ......+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDK-----------AYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhh-----------hCCCcccCCH
Confidence 9999999999887 6999999864321 112334455555555433 3344568999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHh-hcCEEEEEeCCEEEEec
Q 000751 1196 GQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1196 GQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~G 1273 (1303)
|||||++||||++++|+|||||||||+||+.+...+.+.|++..+ .++|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 999999999999999999999999999999999999999998754 2689999999999887 69999999999999999
Q ss_pred ChHHHhh
Q 000751 1274 THDSLLA 1280 (1303)
Q Consensus 1274 t~~eLl~ 1280 (1303)
+++++.+
T Consensus 228 ~~~~~~~ 234 (241)
T cd03256 228 PPAELTD 234 (241)
T ss_pred CHHHhhH
Confidence 9998743
No 185
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=9e-42 Score=399.87 Aligned_cols=222 Identities=26% Similarity=0.429 Sum_probs=195.3
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++.+++...+|++|
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 4899999999974 3599999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCcc-CcccHHHHHHcCCCC----------CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHH
Q 000751 1133 GLVQQEPII-FSTTIRENIIYARHN----------ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRI 1201 (1303)
Q Consensus 1133 ~~VpQdp~L-F~gTIreNl~~g~~~----------~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1201 (1303)
+||||++.+ |+.|++||+.++... .+.+.+.++++.+++.++..+. ..+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~-----------~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRP-----------VTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHH
Confidence 999999987 678999999876421 1234578888888887665432 347999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHhh
Q 000751 1202 AIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLLA 1280 (1303)
Q Consensus 1202 aLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl~ 1280 (1303)
+|||||+++|+||||||||++||+.+...+++.|+++.++++|+|+++|+++.+ +.||||++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 999999999999999999999999999999999998765568999999999988 5699999999999999999999875
Q ss_pred cCchhHHHH
Q 000751 1281 KNGLYVRLM 1289 (1303)
Q Consensus 1281 ~~g~y~~l~ 1289 (1303)
. ....+++
T Consensus 229 ~-~~l~~~~ 236 (402)
T PRK09536 229 A-DTLRAAF 236 (402)
T ss_pred c-HHHHHHh
Confidence 4 2344443
No 186
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=7.9e-42 Score=380.15 Aligned_cols=218 Identities=28% Similarity=0.494 Sum_probs=183.5
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHh-hcce
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWL-RNHL 1132 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~l-R~~i 1132 (1303)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 478999999964 259999999999999999999999999999999999999999999999999988877554 6789
Q ss_pred EEEccCCccCcc-cHHHHHHcCCCCC------------CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHH
Q 000751 1133 GLVQQEPIIFST-TIRENIIYARHNA------------SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQ 1199 (1303)
Q Consensus 1133 ~~VpQdp~LF~g-TIreNl~~g~~~~------------~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1199 (1303)
+||||+|.+|++ |++||+.++.... ..++.. ..+.+.++.+ |++.........|||||||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~q 150 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREAR-----ERAEELLERV--GLADLADRPAGELSYGQQR 150 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHH-----HHHHHHHHHc--CccchhhCChhhCCHHHHH
Confidence 999999999986 9999998753211 011111 1123334433 4444445556689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHHH
Q 000751 1200 RIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDSL 1278 (1303)
Q Consensus 1200 RlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~eL 1278 (1303)
|++||||++++|++|||||||++||+.+.+.+.+.|++..+.++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (236)
T cd03219 151 RLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEV 230 (236)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHh
Confidence 9999999999999999999999999999999999999875456899999999998855 999999999999999999998
Q ss_pred hhc
Q 000751 1279 LAK 1281 (1303)
Q Consensus 1279 l~~ 1281 (1303)
.+.
T Consensus 231 ~~~ 233 (236)
T cd03219 231 RNN 233 (236)
T ss_pred ccC
Confidence 653
No 187
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-42 Score=388.66 Aligned_cols=223 Identities=30% Similarity=0.515 Sum_probs=185.9
Q ss_pred cEEEEeeEEECCCCC--CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCC----CHH
Q 000751 1053 SIELKNVDFCYPSRP--EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLY----NLR 1126 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~----~~~ 1126 (1303)
.|+++||+++|++.. ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997432 13599999999999999999999999999999999999999999999999999754 346
Q ss_pred HhhcceEEEccCC--ccCcccHHHHHHcCCC--CCCHHHHHHHHHHhchHHHHHhCCCCccc-ccCCCCCCCChHHHHHH
Q 000751 1127 WLRNHLGLVQQEP--IIFSTTIRENIIYARH--NASEAEVKEAARIANAHHFISSLPHGYDT-HVGMRGVDLTPGQKQRI 1201 (1303)
Q Consensus 1127 ~lR~~i~~VpQdp--~LF~gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~I~~lp~Gldt-~vge~G~~LSgGQrQRl 1201 (1303)
.+|++|+||||+| .+|+.|++|||.++.. ..+.++..+.+ .+.+..+ |+++ .......+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~-----~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv 154 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYA-----HRLLMDL--GFSRDVMSQSPFQMSGGQMRKI 154 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHH-----HHHHHHc--CCChhhhhCCcccCCHHHHHHH
Confidence 7899999999998 6888999999987632 12333332211 2233332 5543 23445678999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHh
Q 000751 1202 AIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLL 1279 (1303)
Q Consensus 1202 aLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl 1279 (1303)
+|||||+.+|+||||||||++||+.+...+.+.|+++.. .++|+|+|||+++.+ ..||+|++|++|+|++.|+++++.
T Consensus 155 ~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 155 AIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred HHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999998743 368999999999987 469999999999999999999987
Q ss_pred hcC
Q 000751 1280 AKN 1282 (1303)
Q Consensus 1280 ~~~ 1282 (1303)
++.
T Consensus 235 ~~~ 237 (286)
T PRK13646 235 KDK 237 (286)
T ss_pred hCH
Confidence 653
No 188
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-41 Score=378.13 Aligned_cols=212 Identities=29% Similarity=0.464 Sum_probs=181.9
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++||+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 3 l~~~~l~~~~~~~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGDF---VALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECCE---EeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 7899999999742 59999999999999999999999999999999999999999999999999876653 367899
Q ss_pred EEccCCccCc-ccHHHHHHcCCCC--C----C----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHH
Q 000751 1134 LVQQEPIIFS-TTIRENIIYARHN--A----S----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIA 1202 (1303)
Q Consensus 1134 ~VpQdp~LF~-gTIreNl~~g~~~--~----~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1202 (1303)
||||+|.+|+ .|++||+.++... . + ++++.++++..++.++... ...+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADR-----------YPAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhc-----------ChhhCCHHHHHHHH
Confidence 9999999986 5999999875321 1 1 1234555666665444333 33589999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhh
Q 000751 1203 IARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLA 1280 (1303)
Q Consensus 1203 LARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~ 1280 (1303)
|||||+++|++|||||||++||+++.+.+.+.|++..++ ++|+|++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 999999999999999999999999999999999987543 689999999999765 599999999999999999999976
Q ss_pred c
Q 000751 1281 K 1281 (1303)
Q Consensus 1281 ~ 1281 (1303)
.
T Consensus 227 ~ 227 (239)
T cd03296 227 H 227 (239)
T ss_pred C
Confidence 5
No 189
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=9e-42 Score=396.60 Aligned_cols=214 Identities=27% Similarity=0.417 Sum_probs=187.0
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.+.. ++.+
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999974 2489999999999999999999999999999999999999999999999999887764 6789
Q ss_pred EEEccCCccCc-ccHHHHHHcCCCC--CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHH
Q 000751 1133 GLVQQEPIIFS-TTIRENIIYARHN--AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIAR 1205 (1303)
Q Consensus 1133 ~~VpQdp~LF~-gTIreNl~~g~~~--~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLAR 1205 (1303)
+||+|++.+|+ .|++||+.|+... .+ ++++.++++..++.++.++ ...+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~-----------~~~~LSgGq~QRvaLAR 147 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERK-----------YPGQLSGGQQQRVALAR 147 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhC-----------ChhhCCHHHHHHHHHHH
Confidence 99999999996 6999999987421 12 2345666666666555443 34589999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1206 VVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1206 Allr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
||+++|++||||||||+||..+...+.+.|++..++ +.|+|+|||+++.+ ..||+|++|++|++++.|+++++.++.
T Consensus 148 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p 226 (353)
T TIGR03265 148 ALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHP 226 (353)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 999999999999999999999999999999987543 68999999999976 569999999999999999999999763
No 190
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-42 Score=387.33 Aligned_cols=216 Identities=26% Similarity=0.432 Sum_probs=189.0
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.++++||+++|++....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+|++|
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999632234699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEecccc--cccHhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHH
Q 000751 388 GLVTQEPA--LLSLSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIA 458 (1303)
Q Consensus 388 ~~v~Q~~~--l~~~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialA 458 (1303)
+||+|+|. ++..||+|||.++. ..+. +++.++++..++.++.... ..+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKERE-----------PARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 99999983 56789999999873 2333 3456666666666554433 358999999999999
Q ss_pred HhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhc
Q 000751 459 RAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 459 Ral~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
|||+.+|++|||||||++||+.+.+.+.+.++++.+ |+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999988753 8999999999999888999999999999999999888665
No 191
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=7e-42 Score=375.06 Aligned_cols=204 Identities=28% Similarity=0.510 Sum_probs=176.9
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHH---Hhhc
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLR---WLRN 1130 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~---~lR~ 1130 (1303)
|+++||+++|++.. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+.. .+|+
T Consensus 2 l~~~~l~~~~~~~~-~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGGH-QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCCC-eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 78999999996431 3599999999999999999999999999999999999999999999999999876543 4788
Q ss_pred ceEEEccCCccCc-ccHHHHHHcCCC--C----CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHH
Q 000751 1131 HLGLVQQEPIIFS-TTIRENIIYARH--N----ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAI 1203 (1303)
Q Consensus 1131 ~i~~VpQdp~LF~-gTIreNl~~g~~--~----~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaL 1203 (1303)
+++|+||+|.+|. .|++||+.++.. . ..++++.++++..++.++....| .+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999987 599999986421 1 12345777888888766655444 3799999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEE
Q 000751 1204 ARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRI 1269 (1303)
Q Consensus 1204 ARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~I 1269 (1303)
||||+++|+||||||||++||+.+.+.+.+.|++..+.++|+|+|||+++.+. .||+|++|++|+|
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999987555689999999999886 5899999999975
No 192
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.4e-41 Score=374.64 Aligned_cols=214 Identities=29% Similarity=0.430 Sum_probs=180.1
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHh-hcce
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWL-RNHL 1132 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~l-R~~i 1132 (1303)
|+++||+++|++. ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGKS---QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCCe---eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 5799999999643 59999999999999999999999999999999999999999999999999988877654 6789
Q ss_pred EEEccCCccCcc-cHHHHHHcCCCCCCHH----HHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHH
Q 000751 1133 GLVQQEPIIFST-TIRENIIYARHNASEA----EVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVV 1207 (1303)
Q Consensus 1133 ~~VpQdp~LF~g-TIreNl~~g~~~~~~~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAl 1207 (1303)
+|+||++.+|++ |++||+.++....... ++.++++.. ..+++.++ .....||||||||++||||+
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~------~~l~~~~~----~~~~~LS~G~~qrv~laral 147 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELF------PRLKERRK----QLAGTLSGGEQQMLAIARAL 147 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHH------Hhhhhhhh----CchhhCCHHHHHHHHHHHHH
Confidence 999999999986 9999998764322111 122222222 11222233 34558999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhh
Q 000751 1208 LKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLA 1280 (1303)
Q Consensus 1208 lr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~ 1280 (1303)
+++|++|||||||++||+.+...+.+.|++....++|+|++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 148 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 148 MSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred hcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999999987545689999999999865 599999999999999999988764
No 193
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-41 Score=376.91 Aligned_cols=217 Identities=33% Similarity=0.504 Sum_probs=185.3
Q ss_pred EEEEeeEEECCCCC-CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHH---Hhh
Q 000751 1054 IELKNVDFCYPSRP-EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLR---WLR 1129 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~---~lR 1129 (1303)
|+++|++++|+++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. .+|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999997531 12599999999999999999999999999999999999999999999999999877654 357
Q ss_pred cceEEEccCCccCc-ccHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHH
Q 000751 1130 NHLGLVQQEPIIFS-TTIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIA 1202 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1202 (1303)
++++|+||+|.+|. .|++||+.++.. ..+ .+++.++++..++.+...+ ...+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADA-----------YPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhc-----------ChhhCCHHHHHHHH
Confidence 89999999999997 699999986421 112 2345666666666554433 33589999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhh
Q 000751 1203 IARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLA 1280 (1303)
Q Consensus 1203 LARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~ 1280 (1303)
||||++++|++|||||||++||+.+.+.+.+.|++..++ ++|+|++||+++.+. .||++++|++|++++.|+++++.+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999999999999987543 689999999999876 499999999999999999998865
Q ss_pred c
Q 000751 1281 K 1281 (1303)
Q Consensus 1281 ~ 1281 (1303)
.
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 3
No 194
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-41 Score=385.59 Aligned_cols=217 Identities=24% Similarity=0.471 Sum_probs=187.2
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCC--CCCHHHhhc
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLK--LYNLRWLRN 1130 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~--~~~~~~lR~ 1130 (1303)
.|+++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSDG--THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCCC--CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 48999999999632 35999999999999999999999999999999999999999999999999984 345667899
Q ss_pred ceEEEccCC--ccCcccHHHHHHcCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHH
Q 000751 1131 HLGLVQQEP--IIFSTTIRENIIYARH--NASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIA 1202 (1303)
Q Consensus 1131 ~i~~VpQdp--~LF~gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1202 (1303)
+++|+||+| .+|+.|++||+.++.. ..+. +.+.++++..++.++. .....+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLK-----------DKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhh-----------hCCcccCCHHHHHHHH
Confidence 999999998 5789999999987532 1222 3456666777765443 2335589999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhh
Q 000751 1203 IARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLA 1280 (1303)
Q Consensus 1203 LARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~ 1280 (1303)
|||||+.+|+||||||||++||+.+...+.+.|++..++ ++|+|++||+++.+. .||+|++|++|++++.|+++++++
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999987553 689999999999886 699999999999999999999876
Q ss_pred cC
Q 000751 1281 KN 1282 (1303)
Q Consensus 1281 ~~ 1282 (1303)
..
T Consensus 232 ~~ 233 (283)
T PRK13636 232 EK 233 (283)
T ss_pred CH
Confidence 43
No 195
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-41 Score=396.05 Aligned_cols=213 Identities=24% Similarity=0.404 Sum_probs=187.2
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.|+++|++++|++ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.++. ++.|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 3899999999942 35799999999999999999999999999999999999999999999999999887764 4789
Q ss_pred EEEeccccccc-HhHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHH
Q 000751 388 GLVTQEPALLS-LSIRDNIAYGRD---ATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIAR 459 (1303)
Q Consensus 388 ~~v~Q~~~l~~-~ti~~ni~~~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialAR 459 (1303)
|||+|++.+|. .||+|||.|+.. .+. +++.++++..++.++..+.| .+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999995 799999998742 232 34566677777766655544 489999999999999
Q ss_pred hhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhcC
Q 000751 460 AVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLATG 535 (1303)
Q Consensus 460 al~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 535 (1303)
||+++|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+. .||+|++|++|++++.|+++++..+.
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p 226 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKP 226 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCC
Confidence 99999999999999999999999999999988753 799999999998775 59999999999999999999997754
No 196
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.1e-40 Score=376.01 Aligned_cols=220 Identities=27% Similarity=0.420 Sum_probs=197.0
Q ss_pred CcccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhh
Q 000751 1050 VYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLR 1129 (1303)
Q Consensus 1050 ~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR 1129 (1303)
..+.|+++|+++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|.+|+|.+||
T Consensus 36 ~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g------------ 98 (282)
T cd03291 36 DDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG------------ 98 (282)
T ss_pred CCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC------------
Confidence 34579999999952 2499999999999999999999999999999999999999999999998
Q ss_pred cceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhc
Q 000751 1130 NHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLK 1209 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr 1209 (1303)
+++|+||++.+|++|++||+.++.. ..+.++.++++.+++.+.+..+|.++++.+++.+.+||||||||++|||||++
T Consensus 99 -~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~ 176 (282)
T cd03291 99 -RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYK 176 (282)
T ss_pred -EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhc
Confidence 3999999999999999999997643 24456677888889999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHH-HHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcCchhHHH
Q 000751 1210 NAPILLLDEASSSIESESSRVVQEAL-DTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRL 1288 (1303)
Q Consensus 1210 ~p~ILlLDEaTSaLD~~te~~I~~~l-~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~g~y~~l 1288 (1303)
+|+||||||||++||+.+...+.+.+ +.... ++|+|+|||+++.+..||+|++|++|++++.|+++++.+....|.+.
T Consensus 177 ~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~-~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~ 255 (282)
T cd03291 177 DADLYLLDSPFGYLDVFTEKEIFESCVCKLMA-NKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSLRPDFSSK 255 (282)
T ss_pred CCCEEEEECCCccCCHHHHHHHHHHHHHHhhC-CCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhcchHHHHH
Confidence 99999999999999999999888754 44433 68999999999999999999999999999999999998765666655
Q ss_pred H
Q 000751 1289 M 1289 (1303)
Q Consensus 1289 ~ 1289 (1303)
+
T Consensus 256 ~ 256 (282)
T cd03291 256 L 256 (282)
T ss_pred H
Confidence 5
No 197
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=8e-42 Score=377.60 Aligned_cols=210 Identities=33% Similarity=0.502 Sum_probs=181.3
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccC-----CCCCcEEEECCeecCCCC--HH
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFY-----DPTLGEVLLDGENIKNLK--LE 381 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~-----~~~~G~i~~~g~~~~~~~--~~ 381 (1303)
|+++||+|+|+ ++++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|.++.+.+ ..
T Consensus 1 i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYG---DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 57899999995 347999999999999999999999999999999999999 999999999999998776 56
Q ss_pred HHhcceEEEecccccccHhHHHHHhcCCC---C-C----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHH
Q 000751 382 WLRSQIGLVTQEPALLSLSIRDNIAYGRD---A-T----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKI 453 (1303)
Q Consensus 382 ~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~---~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkq 453 (1303)
.++++|+|++|++.+|..|++||+.++.. . . ++++.++++..++.+.+...++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 67889999999999998899999987631 1 1 2345556666665544333211 4689999999
Q ss_pred HHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHH
Q 000751 454 KLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDE 530 (1303)
Q Consensus 454 rialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 530 (1303)
|++|||||+++|++|||||||++||+.+.+.+.+.|+++.+.+|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 99999999999999999999999999999999999998865589999999999876 599999999999999998765
No 198
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.9e-41 Score=378.80 Aligned_cols=213 Identities=31% Similarity=0.477 Sum_probs=182.0
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCH---HHhhc
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNL---RWLRN 1130 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~---~~lR~ 1130 (1303)
|+++||+++|+.. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++..++. ..+|+
T Consensus 2 l~~~~l~~~~~~~--~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPNG--KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCCC--cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 6899999999622 359999999999999999999999999999999999999999999999999987654 45788
Q ss_pred ceEEEccCCccCc-ccHHHHHHcCCCC--------------CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCCh
Q 000751 1131 HLGLVQQEPIIFS-TTIRENIIYARHN--------------ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTP 1195 (1303)
Q Consensus 1131 ~i~~VpQdp~LF~-gTIreNl~~g~~~--------------~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1195 (1303)
+++||||++.+|+ .|++||+.++... ..++++.++++..++.++. .....+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKA-----------YQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhh-----------cCCcccCCH
Confidence 9999999999886 6999999865321 0123455556665554433 334558999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHh-hcCEEEEEeCCEEEEec
Q 000751 1196 GQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1196 GQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~G 1273 (1303)
|||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+ .++|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999999999999998754 2689999999999875 59999999999999999
Q ss_pred ChHHHh
Q 000751 1274 THDSLL 1279 (1303)
Q Consensus 1274 t~~eLl 1279 (1303)
+++++.
T Consensus 229 ~~~~~~ 234 (243)
T TIGR02315 229 APSELD 234 (243)
T ss_pred CHHHhC
Confidence 999874
No 199
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.3e-41 Score=367.34 Aligned_cols=201 Identities=35% Similarity=0.591 Sum_probs=182.8
Q ss_pred EEEEeeEEECCCCCC--cceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcc
Q 000751 1054 IELKNVDFCYPSRPE--VLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNH 1131 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~--~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~ 1131 (1303)
|+++||+++|++... .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 579999999975421 2599999999999999999999999999999999999999999999999 6
Q ss_pred eEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCC
Q 000751 1132 LGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNA 1211 (1303)
Q Consensus 1132 i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p 1211 (1303)
|+||||+|.+|++|++||+.++.. .++++..++++.+++.+++..+|.|+++.+.....+||+|||||++||||++.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999998643 4566788889999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHH-HHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCE
Q 000751 1212 PILLLDEASSSIESESSRVVQE-ALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGR 1268 (1303)
Q Consensus 1212 ~ILlLDEaTSaLD~~te~~I~~-~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~ 1268 (1303)
+++||||||++||+++.+.+.+ .++...++++|+|++||+++.+..||+|++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 45555444689999999999998899999999985
No 200
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-41 Score=385.88 Aligned_cols=218 Identities=27% Similarity=0.458 Sum_probs=184.2
Q ss_pred EEEEeeEEECCCCC--CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCC----CCHHH
Q 000751 1054 IELKNVDFCYPSRP--EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKL----YNLRW 1127 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~----~~~~~ 1127 (1303)
|+++||+++|++.. ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997422 1359999999999999999999999999999999999999999999999999863 34567
Q ss_pred hhcceEEEccCC--ccCcccHHHHHHcCCC--CCCHH----HHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHH
Q 000751 1128 LRNHLGLVQQEP--IIFSTTIRENIIYARH--NASEA----EVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQ 1199 (1303)
Q Consensus 1128 lR~~i~~VpQdp--~LF~gTIreNl~~g~~--~~~~~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1199 (1303)
+|++++||||+| .+|+.|++|||.++.. ..+.+ .+.++++.+++.+.+ .......|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEEL----------LARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhh----------hhCCcccCCHHHHH
Confidence 888999999998 6888999999987632 12333 344555555553211 12334589999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHH
Q 000751 1200 RIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1200 RlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
|++|||||+.+|+||||||||++||+.+...+.+.|++...+ +.|||+|||+++.+. .||||++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999987543 689999999999874 699999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+.+.
T Consensus 233 ~~~~ 236 (290)
T PRK13634 233 IFAD 236 (290)
T ss_pred HhcC
Confidence 8754
No 201
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.9e-41 Score=393.90 Aligned_cols=213 Identities=29% Similarity=0.482 Sum_probs=186.3
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++|++++|++. .+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|++||.++.+.+. .|++|
T Consensus 2 ~L~i~~l~~~~~~~---~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGRT---QVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCCe---EEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 38899999999743 49999999999999999999999999999999999999999999999999987654 46789
Q ss_pred EEEccCCccCc-ccHHHHHHcCCC------CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHH
Q 000751 1133 GLVQQEPIIFS-TTIRENIIYARH------NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRI 1201 (1303)
Q Consensus 1133 ~~VpQdp~LF~-gTIreNl~~g~~------~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1201 (1303)
+||+|++.+|+ .|++||+.++.. ..+ ++++.++++..++.++..+.| ..||||||||+
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgGq~QRv 145 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----------AQLSGGQKQRV 145 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHH
Confidence 99999999997 599999998642 112 235566777777765554433 48999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHh
Q 000751 1202 AIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLL 1279 (1303)
Q Consensus 1202 aLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl 1279 (1303)
+|||||+++|++||||||||+||+.+...+.+.|+++.++ ++|+|+|||+++.+ ..||+|++|++|+|++.|++++++
T Consensus 146 alArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 146 ALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999999999987554 68999999999875 459999999999999999999998
Q ss_pred hc
Q 000751 1280 AK 1281 (1303)
Q Consensus 1280 ~~ 1281 (1303)
++
T Consensus 226 ~~ 227 (353)
T PRK10851 226 RE 227 (353)
T ss_pred hC
Confidence 76
No 202
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.8e-41 Score=366.48 Aligned_cols=204 Identities=35% Similarity=0.553 Sum_probs=182.4
Q ss_pred cccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhc
Q 000751 1051 YGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRN 1130 (1303)
Q Consensus 1051 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~ 1130 (1303)
.+.|+++|++++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|.+|+|.+||.++.+.+...+|+
T Consensus 4 ~~~l~~~~l~~~~~~~~-~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (207)
T cd03369 4 HGEIEVENLSVRYAPDL-PPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRS 82 (207)
T ss_pred CCeEEEEEEEEEeCCCC-cccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHh
Confidence 36799999999997432 25999999999999999999999999999999999999999999999999999888888999
Q ss_pred ceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcC
Q 000751 1131 HLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKN 1210 (1303)
Q Consensus 1131 ~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~ 1210 (1303)
+++||||+|.+|++|++||+.+... .+++++.++++ +......|||||+||++||||++++
T Consensus 83 ~i~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~ 143 (207)
T cd03369 83 SLTIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKR 143 (207)
T ss_pred hEEEEecCCcccCccHHHHhcccCC-CCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhC
Confidence 9999999999999999999986543 34555544443 2345678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecCh
Q 000751 1211 APILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTH 1275 (1303)
Q Consensus 1211 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~ 1275 (1303)
|++|||||||++||+++.+.+.+.|++... ++|+|++||+++.+..||++++|++|++++.|++
T Consensus 144 p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 144 PRVLVLDEATASIDYATDALIQKTIREEFT-NSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999998754 6999999999999888999999999999998874
No 203
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-41 Score=383.24 Aligned_cols=219 Identities=30% Similarity=0.463 Sum_probs=191.3
Q ss_pred cEEEEeeEEECCCCC---CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCC-HHHh
Q 000751 1053 SIELKNVDFCYPSRP---EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYN-LRWL 1128 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~---~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~-~~~l 1128 (1303)
-|+++|++++|++.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997431 236999999999999999999999999999999999999999999999999997654 4567
Q ss_pred hcceEEEccCCc--cCcccHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHH
Q 000751 1129 RNHLGLVQQEPI--IFSTTIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQR 1200 (1303)
Q Consensus 1129 R~~i~~VpQdp~--LF~gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1200 (1303)
|++++||||+|. +|..|+.+|+.++.. ..+ ++++.++++.+++.++..+.| .+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 899999999984 777799999987532 112 345777888888877766554 3899999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHh
Q 000751 1201 IAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLL 1279 (1303)
Q Consensus 1201 laLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl 1279 (1303)
++|||||+++|++|||||||++||+.+...+.+.|+++.+ .++|+|+|||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999999999998754 268999999999999889999999999999999999997
Q ss_pred hcC
Q 000751 1280 AKN 1282 (1303)
Q Consensus 1280 ~~~ 1282 (1303)
.+.
T Consensus 233 ~~~ 235 (280)
T PRK13633 233 KEV 235 (280)
T ss_pred cCh
Confidence 653
No 204
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-41 Score=378.29 Aligned_cols=218 Identities=27% Similarity=0.443 Sum_probs=187.3
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-----CccEEEECCeeCCC--CCH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-----VAGQVLLDGRDLKL--YNL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~--~~~ 1125 (1303)
.|+++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 7 ~l~~~~l~~~~~~~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYTDF---KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeCCc---eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 59999999999642 499999999999999999999999999999999999997 48999999999863 345
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCCC---CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARHN---AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~---~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
..+|++++||||+|.+|+.|++|||.++... .+ ++.+.++++.+++.+.+ ++.+++ ...+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~----~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLNT----NALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHhC----CcccCCHHHH
Confidence 6788999999999999999999999875321 11 34456677777764433 233444 3458999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++|||||+++|++|||||||++||+.+...+.+.|++... ++|+|+|||+++.+. .||+|++|++|++++.|++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 235 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE-SYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDE 235 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999998854 589999999999875 599999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+.++
T Consensus 236 ~~~~ 239 (254)
T PRK14273 236 LFFN 239 (254)
T ss_pred HHhC
Confidence 9865
No 205
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-41 Score=370.71 Aligned_cols=204 Identities=33% Similarity=0.519 Sum_probs=174.9
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+. .+++++
T Consensus 1 l~~~~l~~~~~~~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGSV---RALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCCe---eeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 5789999999642 59999999999999999999999999999999999999999999999999986543 567899
Q ss_pred EEccCCccCc-ccHHHHHHcCCCC--CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1134 LVQQEPIIFS-TTIRENIIYARHN--AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1134 ~VpQdp~LF~-gTIreNl~~g~~~--~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
||||+|.+|. .|++||+.++... .+ ++++.++++..++.++.... ..+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRY-----------PHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcC-----------hhhCCHHHHHHHHHHHH
Confidence 9999999886 6999999865321 11 23456666666665554433 34799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHh-hcCEEEEEeCCEEEEec
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~G 1273 (1303)
|+++|++|||||||++||+.+.+.+.+.|++..+ .++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998754 3689999999999765 59999999999999876
No 206
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.6e-41 Score=376.99 Aligned_cols=217 Identities=29% Similarity=0.485 Sum_probs=186.0
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCC-----ccEEEECCeeCCCC--CHH
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPV-----AGQVLLDGRDLKLY--NLR 1126 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~-----~G~I~idG~di~~~--~~~ 1126 (1303)
|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|++||.++... +..
T Consensus 2 l~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGEK---EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECCe---eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 7899999999743 4999999999999999999999999999999999999998 99999999998763 456
Q ss_pred HhhcceEEEccCCccCcccHHHHHHcCCC--C-CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHH
Q 000751 1127 WLRNHLGLVQQEPIIFSTTIRENIIYARH--N-AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQ 1199 (1303)
Q Consensus 1127 ~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~-~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1199 (1303)
.+|++++||||++.+|+.|++||+.++.. . .+ ++++.++++..++.+++. ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 77899999999999999999999986421 1 12 234566666666653321 1223344589999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHH
Q 000751 1200 RIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSL 1278 (1303)
Q Consensus 1200 RlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eL 1278 (1303)
|++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQI 230 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999998765 489999999999875 5999999999999999999999
Q ss_pred hhc
Q 000751 1279 LAK 1281 (1303)
Q Consensus 1279 l~~ 1281 (1303)
.+.
T Consensus 231 ~~~ 233 (247)
T TIGR00972 231 FTN 233 (247)
T ss_pred HhC
Confidence 764
No 207
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1e-40 Score=376.13 Aligned_cols=240 Identities=25% Similarity=0.407 Sum_probs=206.0
Q ss_pred HHHHHhccCCCCCCCCCCCCCCCCccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC
Q 000751 283 RLYEMISRSSSTTNYDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD 362 (1303)
Q Consensus 283 ri~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~ 362 (1303)
.+.+++..++++.+ ..+.+.....|+++|+++.. +++|+|+||+|++||+++|+|+||||||||+++|+|+++
T Consensus 16 ~~~~~~~~~~~~~~--~~~~~~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~ 88 (282)
T cd03291 16 GFGELLEKAKQENN--DRKHSSDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELE 88 (282)
T ss_pred HHHHHHhccccccc--ccccCCCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 45566655543222 22333445579999999952 369999999999999999999999999999999999999
Q ss_pred CCCcEEEECCeecCCCCHHHHhcceEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcccccCccccC
Q 000751 363 PTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLEKGYETQVGR 442 (1303)
Q Consensus 363 ~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~ 442 (1303)
|++|+|.++| .|+|++|++++|+.|++||+.++....+.++.++++.+++.+.+..+|.++++.+++
T Consensus 89 p~~G~I~i~g-------------~i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~ 155 (282)
T cd03291 89 PSEGKIKHSG-------------RISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGE 155 (282)
T ss_pred CCCcEEEECC-------------EEEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecC
Confidence 9999999998 399999999999999999999876444556777788888999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHH-HHHhcCCCeEEEEecCCccccccCEEEEEeCce
Q 000751 443 AGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEA-LDLLMLGRSTIIIARRLSLIRNADYIAVMDEGR 521 (1303)
Q Consensus 443 ~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~-l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~ 521 (1303)
.+..||||||||++|||||+++|++|||||||++||+.+...+.+. ++.+.+++|+|++||+++.+..||++++|++|+
T Consensus 156 ~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~ 235 (282)
T cd03291 156 GGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGS 235 (282)
T ss_pred CCCcCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999988775 455666899999999999998899999999999
Q ss_pred EeeccChHHHhhcChhHHHHH
Q 000751 522 LFEMGTHDELLATGDLYAELL 542 (1303)
Q Consensus 522 i~~~g~~~~l~~~~~~~~~~~ 542 (1303)
+++.|+++++.+....|.+.+
T Consensus 236 i~~~g~~~~~~~~~~~~~~~~ 256 (282)
T cd03291 236 SYFYGTFSELQSLRPDFSSKL 256 (282)
T ss_pred EEEECCHHHHHhcchHHHHHH
Confidence 999999999886554454333
No 208
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-41 Score=385.03 Aligned_cols=218 Identities=24% Similarity=0.435 Sum_probs=184.0
Q ss_pred cEEEEeeEEECCCCCC--cceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCC--------
Q 000751 1053 SIELKNVDFCYPSRPE--VLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKL-------- 1122 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~--~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~-------- 1122 (1303)
.|+++||+++|++... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 3899999999975321 259999999999999999999999999999999999999999999999987632
Q ss_pred ----------------CCHHHhhcceEEEccCC--ccCcccHHHHHHcCCC--CCCHH----HHHHHHHHhchH-HHHHh
Q 000751 1123 ----------------YNLRWLRNHLGLVQQEP--IIFSTTIRENIIYARH--NASEA----EVKEAARIANAH-HFISS 1177 (1303)
Q Consensus 1123 ----------------~~~~~lR~~i~~VpQdp--~LF~gTIreNl~~g~~--~~~~~----ei~~al~~a~l~-~~I~~ 1177 (1303)
.+...+|++|+||||+| .+|..|++|||.++.. ..+.+ ++.++++.+++. ++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-- 159 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYL-- 159 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhh--
Confidence 13467889999999986 6888999999987642 22332 345556655553 232
Q ss_pred CCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhH-h
Q 000751 1178 LPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMM-R 1256 (1303)
Q Consensus 1178 lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti-~ 1256 (1303)
.....+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++...++|+|+|||+++.+ .
T Consensus 160 ---------~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 160 ---------QRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLE 230 (305)
T ss_pred ---------hCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHH
Confidence 234458999999999999999999999999999999999999999999998755579999999999866 5
Q ss_pred hcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1257 HVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1257 ~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
.||||++|++|+|++.|+++++.++
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHhcC
Confidence 6999999999999999999998765
No 209
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.4e-41 Score=393.22 Aligned_cols=215 Identities=25% Similarity=0.454 Sum_probs=188.6
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCc--cEEEECCeeCCCCCHHHhh
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVA--GQVLLDGRDLKLYNLRWLR 1129 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~--G~I~idG~di~~~~~~~lR 1129 (1303)
|.|+++||+++|++. .+|+|+||+|++||+++|+||||||||||+++|.|+++|++ |+|.+||.++.+.+. .+
T Consensus 4 ~~l~~~~l~~~~~~~---~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 4 GGIRIDHLRVAYGAN---TVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred eEEEEEEEEEEECCe---EEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 679999999999642 49999999999999999999999999999999999999999 999999999987665 36
Q ss_pred cceEEEccCCccCcc-cHHHHHHcCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHH
Q 000751 1130 NHLGLVQQEPIIFST-TIRENIIYARH--NASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIA 1202 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~g-TIreNl~~g~~--~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1202 (1303)
++|+||+|++.+|+. |++|||.|+.. ..+. +++.++++..++.++..+.| .+||||||||+|
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP-----------AQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh-----------hhCCHHHHHHHH
Confidence 789999999999975 99999987632 1222 34666777777766655544 389999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC--CcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHh
Q 000751 1203 IARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG--NKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLL 1279 (1303)
Q Consensus 1203 LARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~--~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl 1279 (1303)
|||||+++|++||||||||+||+.+...+.+.|++..++ +.|+|+|||+++.+ ..||+|+||++|++++.|+++++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999999987554 58999999999876 569999999999999999999998
Q ss_pred hcC
Q 000751 1280 AKN 1282 (1303)
Q Consensus 1280 ~~~ 1282 (1303)
++.
T Consensus 228 ~~p 230 (362)
T TIGR03258 228 DAP 230 (362)
T ss_pred hCc
Confidence 763
No 210
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-41 Score=378.67 Aligned_cols=220 Identities=29% Similarity=0.484 Sum_probs=189.1
Q ss_pred cccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEECCeeCCC--C
Q 000751 1051 YGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD-----PVAGQVLLDGRDLKL--Y 1123 (1303)
Q Consensus 1051 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~ 1123 (1303)
.+.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .
T Consensus 11 ~~~l~~~~l~~~~~~~---~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGKF---HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCCe---EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 3579999999999643 59999999999999999999999999999999999986 579999999999863 4
Q ss_pred CHHHhhcceEEEccCCccCcccHHHHHHcCCC---CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChH
Q 000751 1124 NLRWLRNHLGLVQQEPIIFSTTIRENIIYARH---NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPG 1196 (1303)
Q Consensus 1124 ~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~---~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1196 (1303)
+...+|++++|+||+|.+|+.|++||+.++.. ..+ +++++++++.+++.+.+. ........+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCHH
Confidence 56778999999999999999999999987532 122 234666777776643322 2334556689999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecCh
Q 000751 1197 QKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTH 1275 (1303)
Q Consensus 1197 QrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~ 1275 (1303)
||||++||||++++|+||||||||++||+.+.+.+.+.|++... ++|+|+|||+++.+. .||+|++|++|++++.|++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 239 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ-DYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNT 239 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999998754 589999999999875 5999999999999999999
Q ss_pred HHHhhc
Q 000751 1276 DSLLAK 1281 (1303)
Q Consensus 1276 ~eLl~~ 1281 (1303)
+++.+.
T Consensus 240 ~~~~~~ 245 (260)
T PRK10744 240 DTIFTK 245 (260)
T ss_pred HHHHhC
Confidence 999865
No 211
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-41 Score=393.31 Aligned_cols=212 Identities=25% Similarity=0.466 Sum_probs=185.5
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.|+++|++++|+ +..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.+.. +++|
T Consensus 6 ~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFG---SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred EEEEEeEEEEEC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 589999999994 35699999999999999999999999999999999999999999999999999877653 5789
Q ss_pred EEEeccccccc-HhHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHH
Q 000751 388 GLVTQEPALLS-LSIRDNIAYGRD---AT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIAR 459 (1303)
Q Consensus 388 ~~v~Q~~~l~~-~ti~~ni~~~~~---~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialAR 459 (1303)
+||+|++.+|. .||+|||.|+.. .+ .+++.++++..++.++.. .....||||||||+||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~-----------r~~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFED-----------RYVDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHHHHH
Confidence 99999999995 699999998741 22 234556666666654443 334589999999999999
Q ss_pred hhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccc-cccCEEEEEeCceEeeccChHHHhhcC
Q 000751 460 AVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLI-RNADYIAVMDEGRLFEMGTHDELLATG 535 (1303)
Q Consensus 460 al~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~~ 535 (1303)
||+++|++||||||||+||+.+...+.+.|+++.+ ++|+|+|||+++.+ ..||+|++|++|+|++.|+++++..+.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p 228 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQP 228 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999999988754 79999999999987 459999999999999999999997753
No 212
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-41 Score=382.06 Aligned_cols=219 Identities=29% Similarity=0.471 Sum_probs=185.6
Q ss_pred EEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHh----hc
Q 000751 1055 ELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWL----RN 1130 (1303)
Q Consensus 1055 ~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~l----R~ 1130 (1303)
.++||+++|.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 45677777753 258999999999999999999999999999999999999999999999999988776543 46
Q ss_pred ceEEEccCCccCc-ccHHHHHHcCCC--CC----CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHH
Q 000751 1131 HLGLVQQEPIIFS-TTIRENIIYARH--NA----SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAI 1203 (1303)
Q Consensus 1131 ~i~~VpQdp~LF~-gTIreNl~~g~~--~~----~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaL 1203 (1303)
+++|+||+|.+|+ .|++||+.++.. .. .++++.++++.+++.+++.+.| .+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHH
Confidence 8999999999985 699999986421 11 1345677788888877666554 3799999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1204 ARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1204 ARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
|||++++|+||||||||++||+.+.+.+.+.|++.... ++|+|++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 99999999999999999999999999999999987532 689999999999874 5999999999999999999999865
Q ss_pred -CchhHH
Q 000751 1282 -NGLYVR 1287 (1303)
Q Consensus 1282 -~g~y~~ 1287 (1303)
...|.+
T Consensus 252 ~~~~~~~ 258 (269)
T cd03294 252 PANDYVR 258 (269)
T ss_pred cCcHHHH
Confidence 334443
No 213
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.6e-41 Score=370.13 Aligned_cols=208 Identities=26% Similarity=0.438 Sum_probs=177.8
Q ss_pred EEEEeeEEECCCCCC-cceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1054 IELKNVDFCYPSRPE-VLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
|+++||+++|++... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999975321 159999999999999999999999999999999999999999999999999975 456778999
Q ss_pred EEEccCCccCcc-cHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHH
Q 000751 1133 GLVQQEPIIFST-TIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIAR 1205 (1303)
Q Consensus 1133 ~~VpQdp~LF~g-TIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLAR 1205 (1303)
+|+||+|.+|++ |++||+.+... ..+ ++++.++++..++.+... ....+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLD-----------RRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHh-----------hhhhhcCHHHHHHHHHHH
Confidence 999999999985 99999975421 112 234556666666655443 344589999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEec
Q 000751 1206 VVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1206 Allr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~G 1273 (1303)
|++++|++|||||||++||+.+.+.+.+.|++...+++|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999999999999987555689999999999765 59999999999998865
No 214
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.5e-41 Score=392.24 Aligned_cols=214 Identities=31% Similarity=0.530 Sum_probs=190.2
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++|++++|++. ++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.+.+ ++++
T Consensus 14 ~L~l~~l~~~~~~~---~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 14 LVELRGISKSFDGK---EVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred eEEEEEEEEEECCe---EEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 58999999999642 499999999999999999999999999999999999999999999999999887764 5789
Q ss_pred EEEccCCccCcc-cHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHH
Q 000751 1133 GLVQQEPIIFST-TIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIAR 1205 (1303)
Q Consensus 1133 ~~VpQdp~LF~g-TIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLAR 1205 (1303)
+||+|++.+|+. ||+|||.|+.. ..+ ++++.++++..++.++..+.| .+||||||||+||||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999975 99999998642 112 235677888888887777666 379999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1206 VVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1206 Allr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
||+++|++||||||||+||..+...+.+.|++..++ +.|+|+|||+++.+ ..||+|++|++|+|++.|++++++++.
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p 236 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEP 236 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 999999999999999999999999999999987543 68999999999875 569999999999999999999998763
No 215
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.6e-41 Score=371.83 Aligned_cols=211 Identities=21% Similarity=0.404 Sum_probs=180.7
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++||+++|++. ..++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.... ..+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEE
Confidence 5799999999742 135999999999999999999999999999999999999999999999999987643 66788999
Q ss_pred EEccCCccC-cccHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1134 LVQQEPIIF-STTIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1134 ~VpQdp~LF-~gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
||+|+|.+| ..|++||+.++.. ..+ ++++.++++..++.+.. ++. ..+||||||||++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~----~~~LS~G~~qrv~la~a 147 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-------NKR----ARTLSGGMKRKLSLAIA 147 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-------hCh----hhhCCHHHHHHHHHHHH
Confidence 999999999 5799999976421 112 23455666666664433 232 34799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHH
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSL 1278 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eL 1278 (1303)
++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999998765 599999999999886 5999999999999999999875
No 216
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-41 Score=381.04 Aligned_cols=217 Identities=28% Similarity=0.493 Sum_probs=190.3
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
++++||+++|++.. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 4 l~~~~l~~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 4 IETRDLCYSYSGSK--EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred EEEEEEEEEeCCCC--ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 78999999996432 4999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccCC--ccCcccHHHHHHcCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHH
Q 000751 1134 LVQQEP--IIFSTTIRENIIYARH--NASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIAR 1205 (1303)
Q Consensus 1134 ~VpQdp--~LF~gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLAR 1205 (1303)
||||+| .+|+.|++||+.++.. ..+. +.+.++++.+++.++..+.| ..||||||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP-----------HHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 4788999999986432 1232 34667777777776655443 379999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHhhcCc
Q 000751 1206 VVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLLAKNG 1283 (1303)
Q Consensus 1206 Allr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl~~~g 1283 (1303)
||+.+|++|||||||++||+.+.+.+.+.+++...+ ++|+|++||+++.+ ..||+|++|++|++++.|+++++++...
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~~~ 230 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQPD 230 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcCHH
Confidence 999999999999999999999999999999987543 68999999999988 5799999999999999999999986543
No 217
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-41 Score=378.80 Aligned_cols=218 Identities=27% Similarity=0.463 Sum_probs=187.4
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEECCeeCCC--CCH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD-----PVAGQVLLDGRDLKL--YNL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~~~ 1125 (1303)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 6 ~l~~~~l~~~~~~~---~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGDF---QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECCe---eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 58999999999642 49999999999999999999999999999999999975 589999999999875 345
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCC--CC-----CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARH--NA-----SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-----~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
..+|++++||||++.+|+.|++||+.++.. .. .++++.++++.+++.+.+.. .......+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHH
Confidence 678899999999999999999999987521 11 13456667777777544321 23344568999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++||||++++|+||||||||++||+.+...+.+.|++... ++|+|++||+++.+. .||+|++|++|+|++.|++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 234 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQ 234 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999998754 589999999999875 599999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+.+.
T Consensus 235 ~~~~ 238 (253)
T PRK14242 235 IFTR 238 (253)
T ss_pred HHcC
Confidence 9865
No 218
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-41 Score=373.19 Aligned_cols=211 Identities=24% Similarity=0.410 Sum_probs=179.1
Q ss_pred cEEEEeeEEECCCCC-CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHH---h
Q 000751 1053 SIELKNVDFCYPSRP-EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRW---L 1128 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~---l 1128 (1303)
.|+++||+++|+++. ..++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||.++..++... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997432 136999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-cceEEEccCCccCcc-cHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHH
Q 000751 1129 R-NHLGLVQQEPIIFST-TIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQR 1200 (1303)
Q Consensus 1129 R-~~i~~VpQdp~LF~g-TIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1200 (1303)
| +.++|+||+|.+|+. |++||+.++.. ..+ ++++.++++..++.+. ......+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHR-----------ANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHH
Confidence 3 679999999999975 99999986321 112 2345555665555433 333445899999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHhhcCEEEEEeCCEEEEecC
Q 000751 1201 IAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1201 laLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt 1274 (1303)
++||||++++|+||||||||++||+.+...+.+.|++... +++|+|+|||+++.+..+|++++|++|+|++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 9999999999999999999999999999999999998743 3689999999999999999999999999998775
No 219
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.8e-41 Score=368.47 Aligned_cols=200 Identities=26% Similarity=0.504 Sum_probs=174.9
Q ss_pred EEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceEE
Q 000751 1055 ELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGL 1134 (1303)
Q Consensus 1055 ~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~ 1134 (1303)
+++||+++|++. .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.. ...|++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 468999999642 249999999999999999999999999999999999999999999999998864 456788999
Q ss_pred EccCC--ccCcccHHHHHHcCCCCC--CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcC
Q 000751 1135 VQQEP--IIFSTTIRENIIYARHNA--SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKN 1210 (1303)
Q Consensus 1135 VpQdp--~LF~gTIreNl~~g~~~~--~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~ 1210 (1303)
+||+| .+|+.|++||+.++.+.. .++++.++++..++.++..+.| ..||||||||++||||++++
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhC
Confidence 99998 467899999998764322 2356788888888876655444 37999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEE
Q 000751 1211 APILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIV 1270 (1303)
Q Consensus 1211 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Iv 1270 (1303)
|++|||||||++||+.+.+.+.+.|++..++++|+|++||+++.+. .||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999987555789999999999886 59999999999985
No 220
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-41 Score=377.26 Aligned_cols=217 Identities=28% Similarity=0.423 Sum_probs=189.9
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC---CCCcEEEECCeecCCCCHHHHh
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD---PTLGEVLLDGENIKNLKLEWLR 384 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~---~~~G~i~~~g~~~~~~~~~~~~ 384 (1303)
.|+++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.+.+....|
T Consensus 2 ~~~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYG---KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEEC---CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 378999999995 3479999999999999999999999999999999999985 6999999999999888888889
Q ss_pred cceEEEecccccccHhHHHHHhcCC---CC------CHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHH
Q 000751 385 SQIGLVTQEPALLSLSIRDNIAYGR---DA------TLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKL 455 (1303)
Q Consensus 385 ~~i~~v~Q~~~l~~~ti~~ni~~~~---~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqri 455 (1303)
+.|+|++|++.+|..|++||+.++. .. .++++.++++.+++.+++.. ...+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHH
Confidence 9999999999999999999998763 11 12245566666666554432 24456778999999999
Q ss_pred HHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhc
Q 000751 456 SIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 456 alARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
+||||++++|+++||||||++||+.+...+.+.|.++.+++|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999999999999999999988877999999999999875 5999999999999999999998653
No 221
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.9e-41 Score=365.01 Aligned_cols=203 Identities=33% Similarity=0.523 Sum_probs=181.9
Q ss_pred ccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcc
Q 000751 307 GNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQ 386 (1303)
Q Consensus 307 ~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 386 (1303)
+.++++|++++|+. .+.++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+.
T Consensus 5 ~~l~~~~l~~~~~~-~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAP-DLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCC-CCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 46999999999963 22479999999999999999999999999999999999999999999999999988888888999
Q ss_pred eEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCC
Q 000751 387 IGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPS 466 (1303)
Q Consensus 387 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ 466 (1303)
|+||+|+|.+|++|++||+.+....+++++.++++ +......||||||||++||||++.+|+
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~p~ 145 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKRPR 145 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999998765445444444332 345677899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeCceEeeccCh
Q 000751 467 ILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTH 528 (1303)
Q Consensus 467 ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~ 528 (1303)
++||||||++||+++...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 146 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 146 VLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 99999999999999999999999988778999999999999888999999999999988763
No 222
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-41 Score=379.55 Aligned_cols=218 Identities=28% Similarity=0.525 Sum_probs=189.1
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 58999999999632 23599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCC--ccCcccHHHHHHcCCC--CCCHH----HHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHH
Q 000751 1133 GLVQQEP--IIFSTTIRENIIYARH--NASEA----EVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIA 1204 (1303)
Q Consensus 1133 ~~VpQdp--~LF~gTIreNl~~g~~--~~~~~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLA 1204 (1303)
+||||+| .+++.|++|||.++.. ..+.+ .+.++++..++.++..+. ..+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKE-----------PQNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------cccCCHHHHHHHHHH
Confidence 9999998 4567899999987532 12333 345566667776655443 358999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1205 RVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1205 RAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
|||+++|++|||||||++||+.+.+.+.+.|++..++ ++|+|++||+++.+..||+|++|++|++++.|+++++.+..
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 233 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNNK 233 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcCH
Confidence 9999999999999999999999999999999987543 48999999999988899999999999999999999887643
No 223
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-41 Score=369.75 Aligned_cols=210 Identities=24% Similarity=0.390 Sum_probs=181.7
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGDF---EAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECCE---EeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 5799999999643 599999999999999999999999999999999999999999999999998763 356788999
Q ss_pred EEccCCccCcc-cHHHHHHcCCC--CC----CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1134 LVQQEPIIFST-TIRENIIYARH--NA----SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1134 ~VpQdp~LF~g-TIreNl~~g~~--~~----~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
|+||++.+|+. |++||+.++.. .. .++++.++++..++.++..+.| .+||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLV-----------KTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999998875 99999976421 11 1345677777777766554332 3799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHH
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSL 1278 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eL 1278 (1303)
++.+|++|||||||++||+++.+.+.+.|++..++ ++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 99999999999999999999999999999987554 689999999999876 5999999999999999998875
No 224
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=7.1e-41 Score=371.99 Aligned_cols=217 Identities=28% Similarity=0.488 Sum_probs=182.1
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+... +++++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 789999999964 35999999999999999999999999999999999999999999999999998776544 45899
Q ss_pred EEccCCcc-CcccHHHHHHcCCC--CCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcC
Q 000751 1134 LVQQEPII-FSTTIRENIIYARH--NASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKN 1210 (1303)
Q Consensus 1134 ~VpQdp~L-F~gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~ 1210 (1303)
|+||++.+ +..|++||+.++.. ..+.++..+ .+.++++.+ |++........+||||||||++||||++++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARE-----RIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999987 46799999986532 122222111 112233332 444444555568999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1211 APILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1211 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
|+||||||||++||+.+.+.+.+.|++..+ .++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 999999999999999999999999998753 36899999999998888999999999999999999999875
No 225
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-41 Score=379.04 Aligned_cols=215 Identities=28% Similarity=0.490 Sum_probs=186.7
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCC-HHHhhcce
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYN-LRWLRNHL 1132 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~-~~~lR~~i 1132 (1303)
|+++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+++.+
T Consensus 2 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPDG--TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCCC--CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 7899999999643 24999999999999999999999999999999999999999999999999998775 46788899
Q ss_pred EEEccCCc--cCcccHHHHHHcCCCC--CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHH
Q 000751 1133 GLVQQEPI--IFSTTIRENIIYARHN--AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIA 1204 (1303)
Q Consensus 1133 ~~VpQdp~--LF~gTIreNl~~g~~~--~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLA 1204 (1303)
+||||+|. +++.|++|||.++... .+ ++++.++++..++.++... ....||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHR-----------SPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcC-----------CcccCCHHHHHHHHHH
Confidence 99999985 5678999999875321 22 2345566666666555433 2348999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1205 RVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1205 RAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
|||+.+|+||||||||++||+.+...+.+.|+++..+++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999999875557999999999999999999999999999999999998654
No 226
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4.2e-41 Score=366.59 Aligned_cols=204 Identities=23% Similarity=0.400 Sum_probs=179.6
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++... ..+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 578999999964 2599999999999999999999999999999999999999999999999988764 56788999
Q ss_pred EEccCCccCc-ccHHHHHHcCCC--CCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcC
Q 000751 1134 LVQQEPIIFS-TTIRENIIYARH--NASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKN 1210 (1303)
Q Consensus 1134 ~VpQdp~LF~-gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~ 1210 (1303)
||||++.+|+ .|++||+.++.. ..+++++.++++..++.+...+. ...||||||||++||||++++
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKKK-----------VKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhhh-----------HhhCCHHHHHHHHHHHHHhcC
Confidence 9999998884 799999976531 23466788888888887665432 347999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEec
Q 000751 1211 APILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1211 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~G 1273 (1303)
|++|||||||++||+.+.+.+.+.|++..+.++|+|++||+++.+. .||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999987555689999999999885 59999999999999875
No 227
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-41 Score=393.33 Aligned_cols=213 Identities=26% Similarity=0.448 Sum_probs=185.9
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++|++++|++. .+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+.. +++|
T Consensus 3 ~l~i~~l~~~~~~~---~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGDV---VISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCCe---EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 48999999999642 499999999999999999999999999999999999999999999999999877653 5789
Q ss_pred EEEccCCccCcc-cHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHH
Q 000751 1133 GLVQQEPIIFST-TIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIAR 1205 (1303)
Q Consensus 1133 ~~VpQdp~LF~g-TIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLAR 1205 (1303)
+||+|++.+|+. |++||+.++.. ..+ ++++.++++..++.++..+.| .+||||||||++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----------~~LSgGq~QRvaLAr 146 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP-----------KALSGGQRQRVAIGR 146 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999975 99999987642 122 234667777777765554443 479999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1206 VVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1206 Allr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
||+++|++||||||||+||+.+.+.+.+.|++..++ ++|+|+|||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 147 aL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 147 TLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999999999887543 689999999998764 6999999999999999999999875
No 228
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-41 Score=375.26 Aligned_cols=217 Identities=28% Similarity=0.488 Sum_probs=184.0
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
++++||+++|++. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4789999999752 35999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEccCCccCc-ccHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1134 LVQQEPIIFS-TTIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1134 ~VpQdp~LF~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
|+||+|.+|+ .|++||+.++.. ..+ ++++.++++..++.+ +........+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~lara 149 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVARA 149 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHHHH
Confidence 9999999996 699999986521 112 123344444444321 012334456899999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
++++|++|||||||++||+.+.+.+.+.|++..++ ++|+|++||+++.+ ..||+|++|++|++++.|+++++.+.
T Consensus 150 l~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 150 LAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 99999999999999999999999999999987543 68999999999975 56999999999999999999999765
No 229
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=5.8e-41 Score=372.22 Aligned_cols=217 Identities=26% Similarity=0.426 Sum_probs=181.4
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHh-hcce
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWL-RNHL 1132 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~l-R~~i 1132 (1303)
|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGKR---KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCCE---EeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 5789999999643 49999999999999999999999999999999999999999999999999988776554 5789
Q ss_pred EEEccCCccCcc-cHHHHHHcCCCC--CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhc
Q 000751 1133 GLVQQEPIIFST-TIRENIIYARHN--ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLK 1209 (1303)
Q Consensus 1133 ~~VpQdp~LF~g-TIreNl~~g~~~--~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr 1209 (1303)
+|+||++.+|++ |++||+.++.+. ...++..+ .+.+.++.+ |++........+||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREE-----KLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999986 999999865321 12221111 112333333 44444445556899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHhh
Q 000751 1210 NAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLLA 1280 (1303)
Q Consensus 1210 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl~ 1280 (1303)
+|++|||||||++||+++.+.+.+.|++....++|+|++||+++.+ ..||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 9999999999999999999999999998755568999999999765 5599999999999999999999865
No 230
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.1e-41 Score=384.90 Aligned_cols=215 Identities=27% Similarity=0.469 Sum_probs=184.8
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcc
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNH 1131 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~ 1131 (1303)
..|+++||+++|++ ..+|+||||+|++||++||+||||||||||+++|.|+++|++|+|.++|.|+...+ ...|++
T Consensus 6 ~~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQR 81 (306)
T ss_pred ceEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhc
Confidence 36999999999964 35999999999999999999999999999999999999999999999999997754 457899
Q ss_pred eEEEccCCccCc-ccHHHHHHcCCC--CCCHH----HHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHH
Q 000751 1132 LGLVQQEPIIFS-TTIRENIIYARH--NASEA----EVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIA 1204 (1303)
Q Consensus 1132 i~~VpQdp~LF~-gTIreNl~~g~~--~~~~~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLA 1204 (1303)
|+||||+|.+|. .|++||+.+... ..+.. .+.++++.+++ ++..++.++ +||||||||++||
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~~----~LS~G~~qrl~la 150 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKL-------ENKADAKVG----ELSGGMKRRLTLA 150 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-------chHhcCchh----hCCHHHHHHHHHH
Confidence 999999999986 699999985321 12322 23344444443 334555554 7999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHHHhhc
Q 000751 1205 RVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1205 RAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
|||+.+|++|+|||||++||+.+.+.+++.|+++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 151 ~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 151 RALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 99999999999999999999999999999999876557999999999998864 999999999999999999999765
No 231
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.6e-41 Score=393.19 Aligned_cols=202 Identities=29% Similarity=0.442 Sum_probs=177.9
Q ss_pred CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHH----hcceEEEeccccccc
Q 000751 323 EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWL----RSQIGLVTQEPALLS 398 (1303)
Q Consensus 323 ~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----~~~i~~v~Q~~~l~~ 398 (1303)
++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ |++|+||+|++++|+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 4569999999999999999999999999999999999999999999999999999988887 789999999999996
Q ss_pred -HhHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEE
Q 000751 399 -LSIRDNIAYGRD---ATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLL 470 (1303)
Q Consensus 399 -~ti~~ni~~~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ilil 470 (1303)
.||+|||.++.. .+. +++.++++.+++..++ .....+||||||||++|||||+++|+||||
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~-----------~~~p~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYE-----------HRYPDELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhh-----------hCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 699999998741 222 3455556666554444 444558999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccc-cccCEEEEEeCceEeeccChHHHhhcC
Q 000751 471 DEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLI-RNADYIAVMDEGRLFEMGTHDELLATG 535 (1303)
Q Consensus 471 De~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~~ 535 (1303)
|||||+||+.+.+.+++.+.++. .++|+|+|||+++.+ +.||+|++|++|++++.|++++++.+.
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p 221 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNP 221 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCc
Confidence 99999999999999999998774 389999999999986 559999999999999999999998753
No 232
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-41 Score=381.47 Aligned_cols=211 Identities=30% Similarity=0.522 Sum_probs=185.6
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
-|+++|++|+|++ ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+..+++++|
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4899999999962 34699999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEEeccc--ccccHhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHH
Q 000751 388 GLVTQEP--ALLSLSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIA 458 (1303)
Q Consensus 388 ~~v~Q~~--~l~~~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialA 458 (1303)
+||+|+| .++..|++||+.|+. ..+. +++.++++..++.++..+.| ..||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999998 578899999999873 2222 34566666667665554443 47999999999999
Q ss_pred HhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 459 RAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 459 Ral~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
|||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 99999999999999999999999999999998874 4899999999999985 6999999999999999998654
No 233
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-41 Score=378.29 Aligned_cols=222 Identities=27% Similarity=0.430 Sum_probs=192.2
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.+
T Consensus 11 ~l~i~~l~~~~~~~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPGR---TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECCE---EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 58999999999742 599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCCccCcc-cHHHHHHcCCC----------CCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHH
Q 000751 1133 GLVQQEPIIFST-TIRENIIYARH----------NASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRI 1201 (1303)
Q Consensus 1133 ~~VpQdp~LF~g-TIreNl~~g~~----------~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1201 (1303)
+|+||++.+|.+ |++||+.++.. ...++++.++++.+++.+++...| .+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----------DSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----------ccCCHHHHHHH
Confidence 999999877665 99999987531 012345777888888766554443 37999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHh
Q 000751 1202 AIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLL 1279 (1303)
Q Consensus 1202 aLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl 1279 (1303)
+||||++.+|+||||||||++||+.+.+.+.+.|.+..+. ++|+|+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 9999999999999999999999999999999999987543 689999999999885 69999999999999999999987
Q ss_pred hcCchhHHHH
Q 000751 1280 AKNGLYVRLM 1289 (1303)
Q Consensus 1280 ~~~g~y~~l~ 1289 (1303)
+. .....++
T Consensus 237 ~~-~~~~~~~ 245 (265)
T PRK10575 237 RG-ETLEQIY 245 (265)
T ss_pred CH-HHHHHHh
Confidence 54 2334444
No 234
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-41 Score=380.68 Aligned_cols=217 Identities=29% Similarity=0.491 Sum_probs=184.9
Q ss_pred EEEEEEEEEcCCCC--CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCC--HHHHh
Q 000751 309 IEFRNVYFSYLSRP--EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLK--LEWLR 384 (1303)
Q Consensus 309 i~~~~v~f~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~--~~~~~ 384 (1303)
|+++||+|+|++.. .+++|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...++
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999996321 246999999999999999999999999999999999999999999999999998753 45678
Q ss_pred cceEEEeccc--ccccHhHHHHHhcCC---CCCHHH----HHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHH
Q 000751 385 SQIGLVTQEP--ALLSLSIRDNIAYGR---DATLDQ----IEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKL 455 (1303)
Q Consensus 385 ~~i~~v~Q~~--~l~~~ti~~ni~~~~---~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqri 455 (1303)
++||||+|+| .+|+.|++|||.++. ..+.++ +.++++.+++. +.+........||||||||+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qrv 153 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRRV 153 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHHH
Confidence 8999999998 578899999999864 234433 34444444442 11334556678999999999
Q ss_pred HHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHh
Q 000751 456 SIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELL 532 (1303)
Q Consensus 456 alARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 532 (1303)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+. .||+|++|++|++++.|+.+++.
T Consensus 154 ~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 154 AIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999988753 799999999999875 69999999999999999999886
Q ss_pred hc
Q 000751 533 AT 534 (1303)
Q Consensus 533 ~~ 534 (1303)
+.
T Consensus 234 ~~ 235 (287)
T PRK13637 234 KE 235 (287)
T ss_pred hC
Confidence 54
No 235
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-41 Score=376.11 Aligned_cols=223 Identities=26% Similarity=0.467 Sum_probs=192.3
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++|.++..++...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999964 35999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEccCCccCcc-cHHHHHHcCCCC----------CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHH
Q 000751 1134 LVQQEPIIFST-TIRENIIYARHN----------ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIA 1202 (1303)
Q Consensus 1134 ~VpQdp~LF~g-TIreNl~~g~~~----------~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1202 (1303)
|+||++.+|++ |++||+.++... ..++++.++++..++.+.... ....||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADR-----------RLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcC-----------CcccCCHHHHHHHH
Confidence 99999998876 999999875310 113346667777776554433 23589999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1203 IARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1203 LARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
||||++++|++|||||||++||+++.+.+.+.|++...+++|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 228 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMTP 228 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcCH
Confidence 999999999999999999999999999999999987544689999999999875 6999999999999999999998753
Q ss_pred CchhHHHHhh
Q 000751 1282 NGLYVRLMQP 1291 (1303)
Q Consensus 1282 ~g~y~~l~~~ 1291 (1303)
..+.+.+..
T Consensus 229 -~~~~~~~~~ 237 (255)
T PRK11231 229 -GLLRTVFDV 237 (255)
T ss_pred -HHHHHHhCC
Confidence 345555543
No 236
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=8.8e-41 Score=377.79 Aligned_cols=224 Identities=20% Similarity=0.360 Sum_probs=187.1
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHH---Hhh
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLR---WLR 1129 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~---~lR 1129 (1303)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++.. .+|
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 4899999999964 3599999999999999999999999999999999999999999999999999877653 457
Q ss_pred cceEEEccCCccCcc-cHHHHHHcCCC---CCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHH
Q 000751 1130 NHLGLVQQEPIIFST-TIRENIIYARH---NASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRI 1201 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~g-TIreNl~~g~~---~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1201 (1303)
++++|+||++.+|++ |++||+.++.. ..+. +.+.++++..++.+... ....+||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAK-----------LMPSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHHH
Confidence 889999999999986 99999976421 1122 23444555555543322 23348999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHHHh
Q 000751 1202 AIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDSLL 1279 (1303)
Q Consensus 1202 aLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~eLl 1279 (1303)
+||||++++|++|||||||++||+.+.+.+.+.|++..++ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999987543 6899999999988755 9999999999999999999998
Q ss_pred hcC-chhHHHHh
Q 000751 1280 AKN-GLYVRLMQ 1290 (1303)
Q Consensus 1280 ~~~-g~y~~l~~ 1290 (1303)
++. ..+..++.
T Consensus 233 ~~~~~~~~~~~~ 244 (269)
T PRK11831 233 ANPDPRVRQFLD 244 (269)
T ss_pred cCCcHHHHHHHH
Confidence 753 34455544
No 237
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.1e-41 Score=392.05 Aligned_cols=212 Identities=25% Similarity=0.393 Sum_probs=184.6
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.|+++|++++|+ +..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++.+.++. ++.|
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFG---AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeC---CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 489999999995 34699999999999999999999999999999999999999999999999999887654 6789
Q ss_pred EEEeccccccc-HhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHH
Q 000751 388 GLVTQEPALLS-LSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIAR 459 (1303)
Q Consensus 388 ~~v~Q~~~l~~-~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialAR 459 (1303)
+||+|++.+|. .||+|||.|+. ..+. +++.++++..++.+ .......+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~-----------~~~~~~~~LSgGq~QRvaLAR 147 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPG-----------SERKYPGQLSGGQQQRVALAR 147 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCc-----------hhhCChhhCCHHHHHHHHHHH
Confidence 99999999995 79999999874 2222 33444555554443 344555689999999999999
Q ss_pred hhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhcC
Q 000751 460 AVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLATG 535 (1303)
Q Consensus 460 al~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 535 (1303)
||+++|++|+||||||+||+.+.+.+.+.|+++.+ +.|+|+|||+++.+. .||+|++|++|++++.|+++++..+.
T Consensus 148 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p 226 (353)
T TIGR03265 148 ALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHP 226 (353)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999999988753 799999999999875 59999999999999999999998764
No 238
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6e-41 Score=364.05 Aligned_cols=200 Identities=32% Similarity=0.468 Sum_probs=182.6
Q ss_pred EEEEEEEEEcCCCCC--CCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcc
Q 000751 309 IEFRNVYFSYLSRPE--IPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQ 386 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~--~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 386 (1303)
|+++||+++|++..+ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 578999999964211 3699999999999999999999999999999999999999999999998 5
Q ss_pred eEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCC
Q 000751 387 IGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPS 466 (1303)
Q Consensus 387 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ 466 (1303)
|+||+|+|.+|+.|++||+.++...+++++.++++.+++.+++..+|.|++|.+++.+..||||||||++||||++.+|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999986666677888888889999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHH-HHHHh-cCCCeEEEEecCCccccccCEEEEEeCce
Q 000751 467 ILLLDEVTGGLDFEAERAVQE-ALDLL-MLGRSTIIIARRLSLIRNADYIAVMDEGR 521 (1303)
Q Consensus 467 ililDe~ts~lD~~~~~~i~~-~l~~~-~~~~t~i~ith~~~~~~~~d~i~~l~~G~ 521 (1303)
++||||||++||+++.+.+.+ .++.. .+++|+|++||+++.+..||++++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999888877 45555 34799999999999988899999999985
No 239
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.8e-41 Score=369.93 Aligned_cols=205 Identities=31% Similarity=0.457 Sum_probs=173.4
Q ss_pred EEEEeeEEECCCCC-CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHH----h
Q 000751 1054 IELKNVDFCYPSRP-EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRW----L 1128 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~----l 1128 (1303)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999997421 135999999999999999999999999999999999999999999999999998876432 4
Q ss_pred hcceEEEccCCccCcc-cHHHHHHcCCCC--CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHH
Q 000751 1129 RNHLGLVQQEPIIFST-TIRENIIYARHN--AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRI 1201 (1303)
Q Consensus 1129 R~~i~~VpQdp~LF~g-TIreNl~~g~~~--~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1201 (1303)
|++++|+||+|.+|.+ |++||+.++... .. ++++.++++..++.+.. .....+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRL-----------NHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhh-----------hcChhhcCHHHHHHH
Confidence 6789999999999986 999999875321 11 23455555555554433 333458999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHhhcCEEEEEeCCEE
Q 000751 1202 AIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMRHVDNIVVLNGGRI 1269 (1303)
Q Consensus 1202 aLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~~~D~Iivl~~G~I 1269 (1303)
+|||||+++|+||||||||++||+.+.+.+.+.|++..+ .++|+|+|||+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998755 36899999999998889999999999974
No 240
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.1e-40 Score=384.73 Aligned_cols=225 Identities=26% Similarity=0.350 Sum_probs=187.0
Q ss_pred cEEEEeeEEECCCCC----------CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCC
Q 000751 1053 SIELKNVDFCYPSRP----------EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKL 1122 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~----------~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~ 1122 (1303)
-|+++|++++|+.+. ...+++||||+|++||++||+|+||||||||+++|+|+++|++|+|++||.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999998
Q ss_pred CCHH---HhhcceEEEccCC--ccCc-ccHHHHHHcCC----CCCCHHH----HHHHHHHhchHHHHHhCCCCcccccCC
Q 000751 1123 YNLR---WLRNHLGLVQQEP--IIFS-TTIRENIIYAR----HNASEAE----VKEAARIANAHHFISSLPHGYDTHVGM 1188 (1303)
Q Consensus 1123 ~~~~---~lR~~i~~VpQdp--~LF~-gTIreNl~~g~----~~~~~~e----i~~al~~a~l~~~I~~lp~Gldt~vge 1188 (1303)
++.+ .+|++|+||+|+| .+|+ .||.|||.++. +..+.++ +.++++.+++.+. ....
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~----------~~~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPN----------LINR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChH----------HhcC
Confidence 8754 4678999999999 4774 79999996531 1234333 3445555555211 1223
Q ss_pred CCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhh-cCEEEEEeC
Q 000751 1189 RGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRH-VDNIVVLNG 1266 (1303)
Q Consensus 1189 ~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~-~D~Iivl~~ 1266 (1303)
...+||||||||++|||||+.+|++||+||||++||..+...|.+.|+++.++ +.|+|+|||+++.+.. ||+|+||++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 34589999999999999999999999999999999999999999999987543 6899999999999875 999999999
Q ss_pred CEEEEecChHHHhhcC-chhHH
Q 000751 1267 GRIVEEGTHDSLLAKN-GLYVR 1287 (1303)
Q Consensus 1267 G~Ive~Gt~~eLl~~~-g~y~~ 1287 (1303)
|+|+|.|++++++++. ..|.+
T Consensus 238 G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 238 GHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred CEEEEEcCHHHHHcCCCCHHHH
Confidence 9999999999998763 34554
No 241
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=7.3e-41 Score=375.73 Aligned_cols=214 Identities=29% Similarity=0.453 Sum_probs=184.1
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCC---------
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYN--------- 1124 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~--------- 1124 (1303)
|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGIL---TVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCCe---eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 5799999999743 5999999999999999999999999999999999999999999999999987653
Q ss_pred ----HHHhhcceEEEccCCccCc-ccHHHHHHcCCC---CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCC
Q 000751 1125 ----LRWLRNHLGLVQQEPIIFS-TTIRENIIYARH---NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVD 1192 (1303)
Q Consensus 1125 ----~~~lR~~i~~VpQdp~LF~-gTIreNl~~g~~---~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~ 1192 (1303)
...+|++++||+|++.+|+ .|++||+.++.. ... ++++.++++..++.++..+ ....
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADH-----------MPAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhc-----------Chhh
Confidence 2467889999999999885 799999987421 112 2345566666666554443 3458
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEE
Q 000751 1193 LTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIV 1270 (1303)
Q Consensus 1193 LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Iv 1270 (1303)
||||||||++||||++++|++|||||||++||+.+...+.+.|++..++ ++|+|+|||+++.+. .||++++|++|+++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV 226 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999987543 689999999999885 59999999999999
Q ss_pred EecChHHHhhc
Q 000751 1271 EEGTHDSLLAK 1281 (1303)
Q Consensus 1271 e~Gt~~eLl~~ 1281 (1303)
+.|+++++.+.
T Consensus 227 ~~g~~~~~~~~ 237 (252)
T TIGR03005 227 EQGKPDEIFRQ 237 (252)
T ss_pred EeCCHHHHhcC
Confidence 99999999865
No 242
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=379.04 Aligned_cols=218 Identities=28% Similarity=0.471 Sum_probs=191.7
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCc---cEEEECCeeCCCCCHHHh
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVA---GQVLLDGRDLKLYNLRWL 1128 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~---G~I~idG~di~~~~~~~l 1128 (1303)
+.|+++|++++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++ |+|.+||.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~~-~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDSK-KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCCC-ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 3589999999997432 359999999999999999999999999999999999999987 899999999988888888
Q ss_pred hcceEEEccCC--ccCcccHHHHHHcCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHH
Q 000751 1129 RNHLGLVQQEP--IIFSTTIRENIIYARH--NASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQR 1200 (1303)
Q Consensus 1129 R~~i~~VpQdp--~LF~gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1200 (1303)
|++++||||+| .+++.|++|||.++.. ..+. +++.++++.+++.++....| .+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHH
Confidence 99999999998 4668899999987532 2233 34677788888877665554 4899999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHh
Q 000751 1201 IAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLL 1279 (1303)
Q Consensus 1201 laLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl 1279 (1303)
++|||||+++|++|||||||++||+.+...+.+.|++...+ ++|||++||+++.+..||+|++|++|++++.|+++++.
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999999987543 68999999999999899999999999999999999886
Q ss_pred hc
Q 000751 1280 AK 1281 (1303)
Q Consensus 1280 ~~ 1281 (1303)
..
T Consensus 232 ~~ 233 (282)
T PRK13640 232 SK 233 (282)
T ss_pred cC
Confidence 53
No 243
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-41 Score=389.83 Aligned_cols=215 Identities=31% Similarity=0.486 Sum_probs=184.1
Q ss_pred EEEEEEEEEcCCCC-CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHH---Hh
Q 000751 309 IEFRNVYFSYLSRP-EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW---LR 384 (1303)
Q Consensus 309 i~~~~v~f~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~~ 384 (1303)
|+++|++|+|++.. +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996211 357999999999999999999999999999999999999999999999999998877654 47
Q ss_pred cceEEEeccccccc-HhHHHHHhcCC---CCCHH----HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHH
Q 000751 385 SQIGLVTQEPALLS-LSIRDNIAYGR---DATLD----QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLS 456 (1303)
Q Consensus 385 ~~i~~v~Q~~~l~~-~ti~~ni~~~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqria 456 (1303)
++|+||+|++.+|. .|++||+.++. ..+.+ ++.+.++..++ +........+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL-----------~~~~~~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGL-----------SDKADRYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-----------chhhhCChhhCCHHHHHHHH
Confidence 89999999999885 79999999763 22332 23334444443 33334455689999999999
Q ss_pred HHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHhh
Q 000751 457 IARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 457 lARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999988753 7999999999999865 99999999999999999999976
Q ss_pred c
Q 000751 534 T 534 (1303)
Q Consensus 534 ~ 534 (1303)
.
T Consensus 231 ~ 231 (343)
T PRK11153 231 H 231 (343)
T ss_pred C
Confidence 5
No 244
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=9.4e-41 Score=372.19 Aligned_cols=214 Identities=28% Similarity=0.471 Sum_probs=182.8
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCC--CHHHhhcc
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLY--NLRWLRNH 1131 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~--~~~~lR~~ 1131 (1303)
|+++|++++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...+|++
T Consensus 2 l~~~~l~~~~~~~---~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGPT---QVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECCe---EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 6899999999642 599999999999999999999999999999999999999999999999999864 34577889
Q ss_pred eEEEccCCccCc-ccHHHHHHcCCC---CCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHH
Q 000751 1132 LGLVQQEPIIFS-TTIRENIIYARH---NASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAI 1203 (1303)
Q Consensus 1132 i~~VpQdp~LF~-gTIreNl~~g~~---~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaL 1203 (1303)
++|+||++.+|. .|++||+.++.. ..+. +++.++++..++.+. .......||||||||++|
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrv~l 147 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAER-----------AHHYPSELSGGQQQRVAI 147 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHH-----------HhcChhhcCHHHHHHHHH
Confidence 999999999886 599999987531 1122 233444554444333 333445899999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1204 ARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1204 ARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
|||++++|++|||||||++||+++...+.+.|++..++++|+|++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 148 ARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999999999987555699999999999885 5999999999999999999998764
No 245
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-41 Score=377.43 Aligned_cols=220 Identities=27% Similarity=0.435 Sum_probs=188.8
Q ss_pred cccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-----CccEEEECCeeCCC--C
Q 000751 1051 YGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-----VAGQVLLDGRDLKL--Y 1123 (1303)
Q Consensus 1051 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~--~ 1123 (1303)
.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|++||.++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 457999999999964 2599999999999999999999999999999999999975 89999999999875 3
Q ss_pred CHHHhhcceEEEccCCccCcccHHHHHHcCCC--CC--C----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCCh
Q 000751 1124 NLRWLRNHLGLVQQEPIIFSTTIRENIIYARH--NA--S----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTP 1195 (1303)
Q Consensus 1124 ~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~--~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1195 (1303)
+...+|++++||||+|.+|+.|++||+.++.. .. + ++++.++++.+++.+++. ........+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCH
Confidence 56678899999999999999999999986521 11 1 234567777777754432 122344568999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecC
Q 000751 1196 GQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1196 GQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt 1274 (1303)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|++... ++|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~ 245 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGD 245 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999998755 589999999999884 589999999999999999
Q ss_pred hHHHhhc
Q 000751 1275 HDSLLAK 1281 (1303)
Q Consensus 1275 ~~eLl~~ 1281 (1303)
++++...
T Consensus 246 ~~~~~~~ 252 (267)
T PRK14235 246 TEKMFTN 252 (267)
T ss_pred HHHHHhC
Confidence 9999854
No 246
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-41 Score=380.72 Aligned_cols=221 Identities=29% Similarity=0.481 Sum_probs=186.3
Q ss_pred cEEEEEEEEEcCCCC--CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCC----CHH
Q 000751 308 NIEFRNVYFSYLSRP--EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNL----KLE 381 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~ 381 (1303)
.|+++|++|+|++.. ..++|+||||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996321 24699999999999999999999999999999999999999999999999998653 345
Q ss_pred HHhcceEEEeccc--ccccHhHHHHHhcCC---CCCHHHHHHHHHHhcchHHHHhcccccCc-cccCCCCCCChHHHHHH
Q 000751 382 WLRSQIGLVTQEP--ALLSLSIRDNIAYGR---DATLDQIEEAAKIAHAHTFISSLEKGYET-QVGRAGLALTEEQKIKL 455 (1303)
Q Consensus 382 ~~~~~i~~v~Q~~--~l~~~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~vg~~g~~LSgGqkqri 455 (1303)
.+|++||||+|+| .+|..|+.|||.++. ..+.++..+.+ .+.++.+ |+++ .....+.+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~-----~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv 154 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYA-----HRLLMDL--GFSRDVMSQSPFQMSGGQMRKI 154 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHH-----HHHHHHc--CCChhhhhCCcccCCHHHHHHH
Confidence 6888999999997 688899999999874 23443333221 2233333 5653 34566789999999999
Q ss_pred HHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHh
Q 000751 456 SIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELL 532 (1303)
Q Consensus 456 alARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 532 (1303)
+|||||+.+|+||||||||++||+.+...+.+.++++. .|+|+|+|||+++.+. .||+|++|++|+|++.|+++++.
T Consensus 155 ~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 155 AIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred HHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999999998874 4899999999999875 69999999999999999999887
Q ss_pred hcC
Q 000751 533 ATG 535 (1303)
Q Consensus 533 ~~~ 535 (1303)
+..
T Consensus 235 ~~~ 237 (286)
T PRK13646 235 KDK 237 (286)
T ss_pred hCH
Confidence 643
No 247
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-41 Score=375.27 Aligned_cols=219 Identities=28% Similarity=0.400 Sum_probs=185.9
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-----CccEEEECCeeCC--CCCH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-----VAGQVLLDGRDLK--LYNL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~--~~~~ 1125 (1303)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+.
T Consensus 4 ~l~~~~l~~~~~~~---~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGSN---HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCCe---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 48999999999643 499999999999999999999999999999999999987 4999999999997 4556
Q ss_pred HHhhcceEEEccCCccCcc-cHHHHHHcCCC--C--CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChH
Q 000751 1126 RWLRNHLGLVQQEPIIFST-TIRENIIYARH--N--AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPG 1196 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~g-TIreNl~~g~~--~--~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1196 (1303)
..+|++++|+||+|.+|++ |++||+.++.. . .+ ++++.++++..++.+.+. ........+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVK-------DRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchh-------hhhccChhhCCHH
Confidence 6788999999999999975 99999986421 1 01 234556666666543322 1223445689999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecCh
Q 000751 1197 QKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTH 1275 (1303)
Q Consensus 1197 QrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~ 1275 (1303)
||||++||||++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+. .||+|++|++|++++.|++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 232 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPT 232 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999998755 599999999999875 5999999999999999999
Q ss_pred HHHhhcC
Q 000751 1276 DSLLAKN 1282 (1303)
Q Consensus 1276 ~eLl~~~ 1282 (1303)
+++.+..
T Consensus 233 ~~~~~~~ 239 (253)
T PRK14267 233 RKVFENP 239 (253)
T ss_pred HHHHhCC
Confidence 9998653
No 248
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.4e-40 Score=371.50 Aligned_cols=214 Identities=30% Similarity=0.472 Sum_probs=181.4
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCC--------H
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYN--------L 1125 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~--------~ 1125 (1303)
|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 4 l~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 4 IEVKNLVKKFHGQ---TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred EEEeceEEEECCe---eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 8999999999743 4999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHhhcceEEEccCCccCc-ccHHHHHHcCC---CCCCHH----HHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHH
Q 000751 1126 RWLRNHLGLVQQEPIIFS-TTIRENIIYAR---HNASEA----EVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQ 1197 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~-gTIreNl~~g~---~~~~~~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1197 (1303)
..+|++++||||+|.+|+ .|++||+.++. .....+ .+.++++..+ ++........+|||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~LS~Gq 149 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVG-----------LAGKETSYPRRLSGGQ 149 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------CcchhhCChhhCChHH
Confidence 567889999999999886 69999997642 111222 2333343333 3333334556899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChH
Q 000751 1198 KQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHD 1276 (1303)
Q Consensus 1198 rQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~ 1276 (1303)
|||++||||++.+|+||||||||++||+.+.+.+.+.|++....++|+|+|||+++.+. .||+|++|++|++++.|+++
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 229 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAK 229 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999987554689999999999885 49999999999999999999
Q ss_pred HHhhc
Q 000751 1277 SLLAK 1281 (1303)
Q Consensus 1277 eLl~~ 1281 (1303)
++.+.
T Consensus 230 ~~~~~ 234 (250)
T PRK11264 230 ALFAD 234 (250)
T ss_pred HHhcC
Confidence 98764
No 249
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-41 Score=380.87 Aligned_cols=216 Identities=23% Similarity=0.433 Sum_probs=183.3
Q ss_pred EEEEEEEEEcCCCC--CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCC----CCHHH
Q 000751 309 IEFRNVYFSYLSRP--EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKN----LKLEW 382 (1303)
Q Consensus 309 i~~~~v~f~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~~~~~ 382 (1303)
|+++||+|+|+... .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999996321 1369999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcceEEEeccc--ccccHhHHHHHhcCC-C--CCHHH----HHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHH
Q 000751 383 LRSQIGLVTQEP--ALLSLSIRDNIAYGR-D--ATLDQ----IEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKI 453 (1303)
Q Consensus 383 ~~~~i~~v~Q~~--~l~~~ti~~ni~~~~-~--~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkq 453 (1303)
+|+.|+||+|+| .+|..|+.||+.|+. . .+.++ +.++++..++.+ .........|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~----------~~~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLAD----------EFWEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhccCCcccCCHHHHH
Confidence 889999999998 789999999999874 2 23332 334444444421 1234556789999999
Q ss_pred HHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 454 KLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 454 rialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
|++|||||+.+|+||||||||++||+.+.+.+.+.++++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~ 231 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDV 231 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999998775 4899999999999885 5999999999999999999998
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
..+
T Consensus 232 ~~~ 234 (288)
T PRK13643 232 FQE 234 (288)
T ss_pred HcC
Confidence 654
No 250
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=370.47 Aligned_cols=215 Identities=31% Similarity=0.479 Sum_probs=186.7
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.++++|++|+|+ +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSF---GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 489999999995 34699999999999999999999999999999999999999999999999999888777888999
Q ss_pred EEEecccccccHhHHHHHhcCCC---CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccC
Q 000751 388 GLVTQEPALLSLSIRDNIAYGRD---ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLN 464 (1303)
Q Consensus 388 ~~v~Q~~~l~~~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~ 464 (1303)
+|++|++.+|..|++||+.++.. ...+++.+.++..++.+ .........||||||||++||||++++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNK----------EYATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCH----------HHhhCCcccCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999997642 12334445555554421 122345668999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhcC
Q 000751 465 PSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLATG 535 (1303)
Q Consensus 465 ~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 535 (1303)
|++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+. .||+|++|++|++++.|+++++....
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 223 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNP 223 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCC
Confidence 99999999999999999999999998875 3899999999999876 49999999999999999999987643
No 251
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=377.42 Aligned_cols=215 Identities=27% Similarity=0.433 Sum_probs=183.4
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCC--CCCHHHhhcc
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLK--LYNLRWLRNH 1131 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~--~~~~~~lR~~ 1131 (1303)
|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. +.+...+|++
T Consensus 2 l~~~~l~~~~~~~---~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQDE---PVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCCc---ccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 7899999999642 4999999999999999999999999999999999999999999999999985 3445678899
Q ss_pred eEEEccCCc--cCcccHHHHHHcCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHH
Q 000751 1132 LGLVQQEPI--IFSTTIRENIIYARH--NASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAI 1203 (1303)
Q Consensus 1132 i~~VpQdp~--LF~gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaL 1203 (1303)
++||||+|. +|..|+.+|+.++.. ..+. +++.++++..++.++.. + ...+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~----~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRH-------Q----PIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhc-------C----CchhCCHHHHHHHHH
Confidence 999999985 677899999986421 1222 23455666666654432 2 234899999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1204 ARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1204 ARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
||||+.+|+||||||||++||+.+...+.+.|++....++|+|+|||+++.+. .||+|++|++|++++.|+++++....
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFACT 227 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCh
Confidence 99999999999999999999999999999999987544689999999999885 59999999999999999999987653
No 252
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-41 Score=365.56 Aligned_cols=203 Identities=26% Similarity=0.455 Sum_probs=177.5
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++||+++|+++ ++|+|+||+|++| ++||+||||||||||+++|.|+++|++|+|.++|.++.+.+ ..+|++++
T Consensus 1 i~~~~~~~~~~~~---~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGKK---RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECCE---EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 5799999999643 5999999999999 99999999999999999999999999999999999998776 77899999
Q ss_pred EEccCCccCcc-cHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1134 LVQQEPIIFST-TIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1134 ~VpQdp~LF~g-TIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
|+||+|.+|.+ |++||+.+... ..+ ++++.++++..++.++.+ +.+ .+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~----~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-------KKI----GSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-------Cch----hhCCHHHHHHHHHHHH
Confidence 99999999986 99999976321 111 345677777777765543 222 4799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEec
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~G 1273 (1303)
++++|++|||||||++||+.+.+.+.+.|++... ++|+|+|||+++.+. .||++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998765 499999999999886 59999999999999865
No 253
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=376.10 Aligned_cols=218 Identities=28% Similarity=0.445 Sum_probs=188.0
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++|++++|++.. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~~-~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSDA-SFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 489999999997532 3589999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEccCCc--cCcccHHHHHHcCCCC--CCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHH
Q 000751 1133 GLVQQEPI--IFSTTIRENIIYARHN--ASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIA 1204 (1303)
Q Consensus 1133 ~~VpQdp~--LF~gTIreNl~~g~~~--~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLA 1204 (1303)
+||||+|. ++..|+++|+.++... .+. +++.++++..++.++.. ....+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERAD-----------YEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhh-----------CCcccCCHHHHHHHHHH
Confidence 99999994 4456899999875321 122 34555666666544432 23458999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhhcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1205 RVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1205 RAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
||++++|++|||||||++||+.+.+.+.+.|++..++ ++|+|++||+++.+..||+|++|++|++++.|+++++.+..
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 233 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDHA 233 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcCH
Confidence 9999999999999999999999999999999987543 68999999999988889999999999999999999987653
No 254
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=374.70 Aligned_cols=217 Identities=29% Similarity=0.472 Sum_probs=184.8
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCC--------
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLY-------- 1123 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~-------- 1123 (1303)
+.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..+
T Consensus 4 ~~l~~~~l~~~~~~~---~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGEH---EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECCE---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 569999999999743 599999999999999999999999999999999999999999999999988642
Q ss_pred -----CHHHhhcceEEEccCCccCcc-cHHHHHHcCCC---CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCC
Q 000751 1124 -----NLRWLRNHLGLVQQEPIIFST-TIRENIIYARH---NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRG 1190 (1303)
Q Consensus 1124 -----~~~~lR~~i~~VpQdp~LF~g-TIreNl~~g~~---~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G 1190 (1303)
....+|++++||||+|.+|+. |++||+.++.. ... ++++.++++..++.+.. .....
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QGKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hhCCc
Confidence 135678899999999999974 99999976321 112 23345555555554332 13345
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEE
Q 000751 1191 VDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRI 1269 (1303)
Q Consensus 1191 ~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~I 1269 (1303)
..||||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+.++|+|+|||+++.+.. ||+|++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 6899999999999999999999999999999999999999999999875557999999999999875 999999999999
Q ss_pred EEecChHHHhhc
Q 000751 1270 VEEGTHDSLLAK 1281 (1303)
Q Consensus 1270 ve~Gt~~eLl~~ 1281 (1303)
++.|+++++.+.
T Consensus 231 ~~~~~~~~~~~~ 242 (257)
T PRK10619 231 EEEGAPEQLFGN 242 (257)
T ss_pred EEeCCHHHhhhC
Confidence 999999999865
No 255
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=371.72 Aligned_cols=215 Identities=25% Similarity=0.443 Sum_probs=181.3
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCC------CCCHH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLK------LYNLR 1126 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~------~~~~~ 1126 (1303)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+..
T Consensus 2 ~l~~~~l~~~~~~~---~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T PRK11124 2 SIQLNGINCFYGAH---QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred EEEEEeeEEEECCe---eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHH
Confidence 37899999999643 4999999999999999999999999999999999999999999999999873 22346
Q ss_pred HhhcceEEEccCCccCcc-cHHHHHHcCC---CCCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1127 WLRNHLGLVQQEPIIFST-TIRENIIYAR---HNASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1127 ~lR~~i~~VpQdp~LF~g-TIreNl~~g~---~~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
.+|++++|+||+|.+|++ |++||+.++. ..... +++.++++..++.+++. ....+||||||
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~G~~ 147 (242)
T PRK11124 79 ELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYAD-----------RFPLHLSGGQQ 147 (242)
T ss_pred HHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHH
Confidence 778899999999999975 9999997421 01122 23444455555544433 33458999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++||||++++|+||||||||++||+++...+.+.|++....++|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 148 qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 227 (242)
T PRK11124 148 QRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASC 227 (242)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999987554699999999999885 599999999999999999998
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+.+.
T Consensus 228 ~~~~ 231 (242)
T PRK11124 228 FTQP 231 (242)
T ss_pred hcCc
Confidence 7654
No 256
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.1e-40 Score=367.15 Aligned_cols=206 Identities=26% Similarity=0.462 Sum_probs=173.9
Q ss_pred EEEEeeEEECCCCC-CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHH---hh
Q 000751 1054 IELKNVDFCYPSRP-EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRW---LR 1129 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~---lR 1129 (1303)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.+++... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996421 135999999999999999999999999999999999999999999999999998887654 34
Q ss_pred -cceEEEccCCccCc-ccHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHH
Q 000751 1130 -NHLGLVQQEPIIFS-TTIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRI 1201 (1303)
Q Consensus 1130 -~~i~~VpQdp~LF~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1201 (1303)
++++||||+|.+|+ .|++||+.++.. ..+ .+++.++++..++.+.. ......||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRI-----------NHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHHHHH
Confidence 68999999999996 599999986421 112 22345555555554333 333458999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHhhcCEEEEEeCCEEE
Q 000751 1202 AIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMRHVDNIVVLNGGRIV 1270 (1303)
Q Consensus 1202 aLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~~~D~Iivl~~G~Iv 1270 (1303)
+||||++++|+||||||||++||+.+...+.+.|++..+ .++|+|+|||+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 999999999999999999999999999999999998754 268999999999999999999999999986
No 257
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=7.9e-41 Score=366.03 Aligned_cols=204 Identities=26% Similarity=0.504 Sum_probs=175.4
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++||+++|++. ++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~~---~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGNV---TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECCe---eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 5799999999743 499999999999999999999999999999999999999999999999999766543 56899
Q ss_pred EEccCCccCc-ccHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1134 LVQQEPIIFS-TTIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1134 ~VpQdp~LF~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
|+||++.+|+ .|++||+.++.. ..+ ++++.++++..++.++....| ..||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKP-----------KQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCCh-----------hhCCHHHHHHHHHHHH
Confidence 9999999985 699999987521 112 234556667777665544433 4799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHhh-cCEEEEEeCCEEEEec
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~G 1273 (1303)
++++|++|||||||++||+.+.+.+.+.|++..+ .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999999999999998754 26899999999998765 9999999999999876
No 258
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-40 Score=367.74 Aligned_cols=215 Identities=25% Similarity=0.399 Sum_probs=181.5
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHH-hhcc
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRW-LRNH 1131 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~-lR~~ 1131 (1303)
.|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +|+.
T Consensus 5 ~l~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGKI---QALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCCc---eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 48999999999643 5999999999999999999999999999999999999999999999999998887654 6788
Q ss_pred eEEEccCCccCcc-cHHHHHHcCCCCCCHHH----HHHHHHHh-chHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHH
Q 000751 1132 LGLVQQEPIIFST-TIRENIIYARHNASEAE----VKEAARIA-NAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIAR 1205 (1303)
Q Consensus 1132 i~~VpQdp~LF~g-TIreNl~~g~~~~~~~e----i~~al~~a-~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLAR 1205 (1303)
++|+||++.+|++ |++||+.++....+.++ +.++++.. ++.+ ........||||||||++|||
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~-----------~~~~~~~~LS~G~~qrl~la~ 150 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHE-----------RRIQRAGTMSGGEQQMLAIGR 150 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHH-----------HHhCchhhCCHHHHHHHHHHH
Confidence 9999999999985 99999987542222222 22223222 1211 112234589999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1206 VVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1206 Allr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
|++++|+||||||||++||+.+.+.+.+.|++..++++|+|++||+++.+ ..||+|++|++|++++.|+++++.+.
T Consensus 151 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 151 ALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred HHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999999998755579999999999865 56999999999999999999999753
No 259
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=5.4e-41 Score=373.44 Aligned_cols=220 Identities=29% Similarity=0.465 Sum_probs=183.7
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHH-hcce
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWL-RSQI 387 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-~~~i 387 (1303)
++++|++|+|+ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..|
T Consensus 1 l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFG---GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEEC---CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 46899999995 3469999999999999999999999999999999999999999999999999988776554 5679
Q ss_pred EEEecccccccH-hHHHHHhcCCC-CCHHHH-------HHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHH
Q 000751 388 GLVTQEPALLSL-SIRDNIAYGRD-ATLDQI-------EEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIA 458 (1303)
Q Consensus 388 ~~v~Q~~~l~~~-ti~~ni~~~~~-~~~~~~-------~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialA 458 (1303)
+||+|++.+|.. |++||+.++.. .....+ ........+++.++.+ |++.........||||||||++||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHH
Confidence 999999999875 99999987641 100000 0000111223444444 566566677789999999999999
Q ss_pred HhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHhh
Q 000751 459 RAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 459 Ral~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
||++.+|+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 99999999999999999999999999999998875 68999999999999865 99999999999999999988754
No 260
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=379.77 Aligned_cols=216 Identities=28% Similarity=0.463 Sum_probs=183.5
Q ss_pred EEEEEEEEEcCCCC--CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCC----CCHHH
Q 000751 309 IEFRNVYFSYLSRP--EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKN----LKLEW 382 (1303)
Q Consensus 309 i~~~~v~f~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~~~~~ 382 (1303)
++++|++|+|++.. ..++|+||||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996321 1469999999999999999999999999999999999999999999999999863 34566
Q ss_pred HhcceEEEeccc--ccccHhHHHHHhcCC---CCCHH----HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHH
Q 000751 383 LRSQIGLVTQEP--ALLSLSIRDNIAYGR---DATLD----QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKI 453 (1303)
Q Consensus 383 ~~~~i~~v~Q~~--~l~~~ti~~ni~~~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkq 453 (1303)
.|+.|+||+|+| .+|+.||+|||.|+. ..+.+ ++.++++.+++++. ........|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEE----------LLARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChh----------hhhCCcccCCHHHHH
Confidence 788999999998 688899999999873 23333 33444445544321 123456689999999
Q ss_pred HHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHH
Q 000751 454 KLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDE 530 (1303)
Q Consensus 454 rialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 530 (1303)
|++|||||+.+|++|||||||++||+.+...+.+.|+++. .|.|+|+|||+++.+. .||+|++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999999998875 3899999999999875 599999999999999999998
Q ss_pred Hhhc
Q 000751 531 LLAT 534 (1303)
Q Consensus 531 l~~~ 534 (1303)
+.+.
T Consensus 233 ~~~~ 236 (290)
T PRK13634 233 IFAD 236 (290)
T ss_pred HhcC
Confidence 8754
No 261
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=378.23 Aligned_cols=218 Identities=27% Similarity=0.462 Sum_probs=183.0
Q ss_pred cEEEEeeEEECCCCC--CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCC----CHH
Q 000751 1053 SIELKNVDFCYPSRP--EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLY----NLR 1126 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~----~~~ 1126 (1303)
.|+++||+++|++.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996321 13599999999999999999999999999999999999999999999999998653 346
Q ss_pred HhhcceEEEccCC--ccCcccHHHHHHcCCC--CCCHH----HHHHHHHHhchH-HHHHhCCCCcccccCCCCCCCChHH
Q 000751 1127 WLRNHLGLVQQEP--IIFSTTIRENIIYARH--NASEA----EVKEAARIANAH-HFISSLPHGYDTHVGMRGVDLTPGQ 1197 (1303)
Q Consensus 1127 ~lR~~i~~VpQdp--~LF~gTIreNl~~g~~--~~~~~----ei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSgGQ 1197 (1303)
..|+.++|+||+| .+|+.|++|||.++.. ..+.+ .+.++++.+++. ++ .......|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~~LSgGq 150 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDL-----------ISKSPFELSGGQ 150 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhH-----------hhCCcccCCHHH
Confidence 6788999999998 5888899999986431 12222 234444444442 22 233455899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChH
Q 000751 1198 KQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHD 1276 (1303)
Q Consensus 1198 rQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~ 1276 (1303)
|||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+.+.|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999987555689999999999874 69999999999999999999
Q ss_pred HHhhc
Q 000751 1277 SLLAK 1281 (1303)
Q Consensus 1277 eLl~~ 1281 (1303)
++.+.
T Consensus 231 ~~~~~ 235 (287)
T PRK13641 231 EIFSD 235 (287)
T ss_pred HHhcC
Confidence 98764
No 262
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=374.56 Aligned_cols=217 Identities=28% Similarity=0.420 Sum_probs=186.0
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~ 380 (1303)
.|+++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. .+.
T Consensus 7 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYT---DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeC---CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 599999999995 34699999999999999999999999999999999999997 48999999998853 345
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCCC----CC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGRD----AT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~----~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
..+|+.|+||+|++.+|..|++|||.++.. .+ ++++.++++.+++.+.+ ++.++ ....+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~----~~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLN----TNALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHh----CCcccCCHHHH
Confidence 567889999999999999999999998641 12 23455556666554332 22333 35678999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999999877899999999999875 5999999999999999999998
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
...
T Consensus 237 ~~~ 239 (254)
T PRK14273 237 FFN 239 (254)
T ss_pred HhC
Confidence 754
No 263
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=374.81 Aligned_cols=217 Identities=29% Similarity=0.487 Sum_probs=187.2
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC-----CCCcEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD-----PTLGEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 380 (1303)
.|+++||+|+|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 6 ~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYG---DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEEC---CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 599999999995 3469999999999999999999999999999999999975 689999999999864 345
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCC---CC-----CHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGR---DA-----TLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
..+|+.|+||+|++.+|..|++||+.++. .. .++++.++++.+++.+++. +.......+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCHHHH
Confidence 67788999999999999899999998752 11 1234556666666654332 234556778999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998877899999999999885 5999999999999999999988
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
...
T Consensus 236 ~~~ 238 (253)
T PRK14242 236 FTR 238 (253)
T ss_pred HcC
Confidence 654
No 264
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-40 Score=378.87 Aligned_cols=221 Identities=26% Similarity=0.461 Sum_probs=182.6
Q ss_pred cccEEEEeeEEECCCCC--CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCC----C-
Q 000751 1051 YGSIELKNVDFCYPSRP--EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKL----Y- 1123 (1303)
Q Consensus 1051 ~g~I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~----~- 1123 (1303)
.+.|+++|++++|++.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 36799999999997542 1259999999999999999999999999999999999999999999999999853 2
Q ss_pred CHHHhhcceEEEccCC--ccCcccHHHHHHcCCC--CCCHHHH----HHHHHHhchHHHHHhCCCCcccccCCCCCCCCh
Q 000751 1124 NLRWLRNHLGLVQQEP--IIFSTTIRENIIYARH--NASEAEV----KEAARIANAHHFISSLPHGYDTHVGMRGVDLTP 1195 (1303)
Q Consensus 1124 ~~~~lR~~i~~VpQdp--~LF~gTIreNl~~g~~--~~~~~ei----~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1195 (1303)
+...+|++++||||+| .+|+.|++||+.++.. ....++. .++++..++ |.+ ........|||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L-------~~~---~~~~~~~~LS~ 153 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQL-------PED---YVKRSPFELSG 153 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-------Chh---HhcCChhhCCH
Confidence 4567888999999998 4788899999987532 1233332 223333322 222 12344568999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhH-hhcCEEEEEeCCEEEEec
Q 000751 1196 GQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1196 GQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~G 1273 (1303)
|||||++|||||+++|++|||||||++||+.+.+.+.+.|++..++ ++|+|+|||+++.+ ..||+|++|++|++++.|
T Consensus 154 Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g 233 (289)
T PRK13645 154 GQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIG 233 (289)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 9999999999999999999999999999999999999999987542 68999999999976 469999999999999999
Q ss_pred ChHHHhhc
Q 000751 1274 THDSLLAK 1281 (1303)
Q Consensus 1274 t~~eLl~~ 1281 (1303)
+++++.+.
T Consensus 234 ~~~~~~~~ 241 (289)
T PRK13645 234 SPFEIFSN 241 (289)
T ss_pred CHHHHhcC
Confidence 99988654
No 265
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-40 Score=366.38 Aligned_cols=206 Identities=31% Similarity=0.464 Sum_probs=176.0
Q ss_pred EEEEeeEEECCCCC-CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1054 IELKNVDFCYPSRP-EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
|+++|++++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 57899999997421 1369999999999999999999999999999999999999999999999998863 46789
Q ss_pred EEEccCCccCc-ccHHHHHHcCCC--CC----CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHH
Q 000751 1133 GLVQQEPIIFS-TTIRENIIYARH--NA----SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIAR 1205 (1303)
Q Consensus 1133 ~~VpQdp~LF~-gTIreNl~~g~~--~~----~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLAR 1205 (1303)
+||||+|.+|+ .|++||+.++.. .. .++++.++++..++.++..+.| .+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYP-----------HQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 99999999997 699999986521 11 1345666777777765554443 479999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHh-hcCEEEEEe--CCEEEEecCh
Q 000751 1206 VVLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMR-HVDNIVVLN--GGRIVEEGTH 1275 (1303)
Q Consensus 1206 Allr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~-~~D~Iivl~--~G~Ive~Gt~ 1275 (1303)
||+++|++|||||||++||+.+.+.+.+.|++..+ .++|+|+|||+++.+. .||+|++|+ +|++++.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 99999999999999999999999999999998643 3689999999999764 599999999 7999998864
No 266
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.6e-40 Score=373.39 Aligned_cols=225 Identities=28% Similarity=0.395 Sum_probs=184.9
Q ss_pred cEEEEeeEEECCCC------CCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHH
Q 000751 1053 SIELKNVDFCYPSR------PEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLR 1126 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~------~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~ 1126 (1303)
.|+++||+++|++. .+.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++..++..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999999632 124699999999999999999999999999999999999999999999999999887654
Q ss_pred ---HhhcceEEEccCCc--cC-cccHHHHHHcCCC---CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCC
Q 000751 1127 ---WLRNHLGLVQQEPI--IF-STTIRENIIYARH---NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDL 1193 (1303)
Q Consensus 1127 ---~lR~~i~~VpQdp~--LF-~gTIreNl~~g~~---~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1193 (1303)
.+|++++||||+|. ++ ..|++||+.++.. ... ++++.++++..++.+ .........|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~----------~~~~~~~~~L 151 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRS----------EDADKLPRQL 151 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCChhhC
Confidence 36788999999983 44 3699999964321 111 223444454444421 1223455689
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEE
Q 000751 1194 TPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVE 1271 (1303)
Q Consensus 1194 SgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive 1271 (1303)
|||||||++||||++++|+||||||||++||+.+.+.+.+.|++..+. ++|+|+|||+++.+. .||+|++|++|++++
T Consensus 152 SgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 231 (265)
T TIGR02769 152 SGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVE 231 (265)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEE
Confidence 999999999999999999999999999999999999999999987543 689999999999886 599999999999999
Q ss_pred ecChHHHhhcCchhHH
Q 000751 1272 EGTHDSLLAKNGLYVR 1287 (1303)
Q Consensus 1272 ~Gt~~eLl~~~g~y~~ 1287 (1303)
.|++++++.....|.+
T Consensus 232 ~g~~~~~~~~~~~~~~ 247 (265)
T TIGR02769 232 ECDVAQLLSFKHPAGR 247 (265)
T ss_pred ECCHHHHcCCCCHHHH
Confidence 9999999875443443
No 267
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.1e-40 Score=389.01 Aligned_cols=212 Identities=27% Similarity=0.466 Sum_probs=187.2
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.++++|++++|+ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+.. ++.|
T Consensus 14 ~L~l~~l~~~~~---~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 14 LVELRGISKSFD---GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred eEEEEEEEEEEC---CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 589999999995 34699999999999999999999999999999999999999999999999999877654 4789
Q ss_pred EEEeccccccc-HhHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHH
Q 000751 388 GLVTQEPALLS-LSIRDNIAYGRD---ATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIAR 459 (1303)
Q Consensus 388 ~~v~Q~~~l~~-~ti~~ni~~~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialAR 459 (1303)
+||+|++.+|. .||+|||.|+.. .+. +++.++++..++.++..+.| .+||||||||+||||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999995 699999998742 222 34566677777766665555 479999999999999
Q ss_pred hhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhcC
Q 000751 460 AVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLATG 535 (1303)
Q Consensus 460 al~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 535 (1303)
||+++|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+. .||+|++|++|+|++.|++++++.+.
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p 236 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEP 236 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 99999999999999999999999999999988753 899999999999864 69999999999999999999998764
No 268
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2e-40 Score=367.28 Aligned_cols=213 Identities=27% Similarity=0.416 Sum_probs=180.0
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHH-hhcce
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRW-LRNHL 1132 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~-lR~~i 1132 (1303)
|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .++++
T Consensus 1 l~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQS---HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCCe---EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 5799999999743 5999999999999999999999999999999999999999999999999998887654 46789
Q ss_pred EEEccCCccCcc-cHHHHHHcCCCCC--CHH-HHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHh
Q 000751 1133 GLVQQEPIIFST-TIRENIIYARHNA--SEA-EVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVL 1208 (1303)
Q Consensus 1133 ~~VpQdp~LF~g-TIreNl~~g~~~~--~~~-ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAll 1208 (1303)
+|+||++.+|+. |++||+.++.... ..+ ...++++..+ +++........+||||||||++||||++
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999999986 9999998753221 112 2233333332 1222233445589999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHHHh
Q 000751 1209 KNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDSLL 1279 (1303)
Q Consensus 1209 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~eLl 1279 (1303)
++|++|||||||++||+.+.+.+.+.|.+..++ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 999999999999999999999999999987542 6899999999998875 9999999999999999999973
No 269
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-40 Score=375.52 Aligned_cols=218 Identities=26% Similarity=0.449 Sum_probs=183.0
Q ss_pred EEEEeeEEECCCCC--CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCC----CHHH
Q 000751 1054 IELKNVDFCYPSRP--EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLY----NLRW 1127 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~----~~~~ 1127 (1303)
|+++||+++|++.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997432 13599999999999999999999999999999999999999999999999998764 3567
Q ss_pred hhcceEEEccCC--ccCcccHHHHHHcCCC--CCCHHHH----HHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHH
Q 000751 1128 LRNHLGLVQQEP--IIFSTTIRENIIYARH--NASEAEV----KEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQ 1199 (1303)
Q Consensus 1128 lR~~i~~VpQdp--~LF~gTIreNl~~g~~--~~~~~ei----~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1199 (1303)
+|++|+|+||+| .+|+.|++||+.++.. ..+.++. .++++..++.+ ........+|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISE----------SLFEKNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCCcccCCHHHHH
Confidence 889999999998 6888999999986521 1233332 33334433321 1223445689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHH
Q 000751 1200 RIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSL 1278 (1303)
Q Consensus 1200 RlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eL 1278 (1303)
|++|||||+++|++|||||||++||+.+.+.+.+.|++..+.++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999987554689999999999875 5999999999999999999998
Q ss_pred hhc
Q 000751 1279 LAK 1281 (1303)
Q Consensus 1279 l~~ 1281 (1303)
.+.
T Consensus 233 ~~~ 235 (280)
T PRK13649 233 FQD 235 (280)
T ss_pred hcC
Confidence 764
No 270
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=376.47 Aligned_cols=216 Identities=28% Similarity=0.465 Sum_probs=189.6
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.++++||+|+|++ ..+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPD-AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCC-CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 4899999999953 234699999999999999999999999999999999999999999999999999888877788899
Q ss_pred EEEeccc--ccccHhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHH
Q 000751 388 GLVTQEP--ALLSLSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIA 458 (1303)
Q Consensus 388 ~~v~Q~~--~l~~~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialA 458 (1303)
+||+|++ .+++.|++|||.++. ..+. +++.++++..++.+++...| ..||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 466789999999863 2232 34566666666666555444 47999999999999
Q ss_pred HhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhcC
Q 000751 459 RAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLATG 535 (1303)
Q Consensus 459 Ral~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 535 (1303)
|||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+.+++.+..
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKSG 231 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcCH
Confidence 999999999999999999999999999999988764 79999999999998889999999999999999999887653
No 271
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=374.58 Aligned_cols=219 Identities=31% Similarity=0.530 Sum_probs=188.5
Q ss_pred CccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC-----CCCcEEEECCeecCC--C
Q 000751 306 HGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD-----PTLGEVLLDGENIKN--L 378 (1303)
Q Consensus 306 ~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~ 378 (1303)
.+.|+++|++|+|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .
T Consensus 11 ~~~l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYG---KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeC---CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 34699999999995 3469999999999999999999999999999999999986 589999999999853 4
Q ss_pred CHHHHhcceEEEecccccccHhHHHHHhcCC----CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChH
Q 000751 379 KLEWLRSQIGLVTQEPALLSLSIRDNIAYGR----DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEE 450 (1303)
Q Consensus 379 ~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~----~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgG 450 (1303)
+...+|++|+||+|++.+|..|++||+.++. ..+. +++.++++..++.+.+ .....+...+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEV-------KDKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhh-------HHHHhcCCCCCCHH
Confidence 5667889999999999999999999998763 1222 3455566666654333 23345667789999
Q ss_pred HHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChH
Q 000751 451 QKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHD 529 (1303)
Q Consensus 451 qkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~ 529 (1303)
||||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+.+
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999998877899999999999885 59999999999999999999
Q ss_pred HHhhc
Q 000751 530 ELLAT 534 (1303)
Q Consensus 530 ~l~~~ 534 (1303)
++...
T Consensus 241 ~~~~~ 245 (260)
T PRK10744 241 TIFTK 245 (260)
T ss_pred HHHhC
Confidence 88654
No 272
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=370.41 Aligned_cols=205 Identities=27% Similarity=0.380 Sum_probs=178.9
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|+++
T Consensus 12 ~l~i~~l~~~~~~~---~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGER---TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECCc---ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 49999999999643 4999999999999999999999999999999999999999999999998763 467899
Q ss_pred EEEccCCccCc-ccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCC
Q 000751 1133 GLVQQEPIIFS-TTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNA 1211 (1303)
Q Consensus 1133 ~~VpQdp~LF~-gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p 1211 (1303)
+|++|+|.+|+ .|++||+.++.....++++.++++..++.+.... ...+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRANE-----------WPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHhcC-----------ChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999997 6999999876432234567777777777654433 34589999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChH
Q 000751 1212 PILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHD 1276 (1303)
Q Consensus 1212 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~ 1276 (1303)
++|||||||++||+.+...+.+.|++..+ .++|+|+|||+++.+. .||+|++|++|++++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999999999999999999988643 3689999999999874 59999999999999988764
No 273
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=389.11 Aligned_cols=201 Identities=30% Similarity=0.487 Sum_probs=176.4
Q ss_pred ceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHh----hcceEEEccCCccCc-c
Q 000751 1070 LVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWL----RNHLGLVQQEPIIFS-T 1144 (1303)
Q Consensus 1070 ~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~l----R~~i~~VpQdp~LF~-g 1144 (1303)
++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.|+.+++...+ |++++||||++.+|+ .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 38999999999999999999999999999999999999999999999999998887654 468999999999997 5
Q ss_pred cHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeC
Q 000751 1145 TIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDE 1218 (1303)
Q Consensus 1145 TIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDE 1218 (1303)
|++||+.++.. ..+ ++++.++++.+++.++..+.| .+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----------~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP-----------DELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999987532 112 245667777777766655544 3799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1219 ASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1219 aTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
|||+||+.+.+.+++.|.+..+ .++|+|+|||+++.+. .||+|++|++|+|++.|++++++.+
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC
Confidence 9999999999999999998743 3689999999999864 5999999999999999999999875
No 274
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=9.7e-41 Score=365.60 Aligned_cols=202 Identities=30% Similarity=0.512 Sum_probs=175.7
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHH---Hhhc
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLR---WLRN 1130 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~---~lR~ 1130 (1303)
|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++.. .+|+
T Consensus 2 l~~~~l~~~~~~~--~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPGG--VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCCC--ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 7899999999532 3599999999999999999999999999999999999999999999999999887643 4788
Q ss_pred ceEEEccCCccCc-ccHHHHHHcCCC------CCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHH
Q 000751 1131 HLGLVQQEPIIFS-TTIRENIIYARH------NASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAI 1203 (1303)
Q Consensus 1131 ~i~~VpQdp~LF~-gTIreNl~~g~~------~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaL 1203 (1303)
+++|+||+|.+|. .|++||+.++.. ...+++++++++..++.+...+.| .+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999996 699999987421 112346677788888766554443 3799999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCE
Q 000751 1204 ARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGR 1268 (1303)
Q Consensus 1204 ARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~ 1268 (1303)
||||+++|++|||||||++||+.+...+.+.|++..++++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999875556999999999998875 89999999985
No 275
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=9.9e-41 Score=373.46 Aligned_cols=216 Identities=31% Similarity=0.496 Sum_probs=185.2
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCC-----CcEEEECCeecCCC--CHH
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPT-----LGEVLLDGENIKNL--KLE 381 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~~--~~~ 381 (1303)
|+++||+++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++... +..
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYG---EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEEC---CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 78999999995 346999999999999999999999999999999999999998 99999999998753 456
Q ss_pred HHhcceEEEecccccccHhHHHHHhcCC---C-CCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHH
Q 000751 382 WLRSQIGLVTQEPALLSLSIRDNIAYGR---D-ATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKI 453 (1303)
Q Consensus 382 ~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~-~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkq 453 (1303)
..++.|+||+|++.+|..|++||+.++. . .+. +++.++++..++.+++. ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 6788999999999999999999998753 1 122 23445555555543221 2334556789999999
Q ss_pred HHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHh
Q 000751 454 KLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELL 532 (1303)
Q Consensus 454 rialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 532 (1303)
|++|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999998877799999999999875 59999999999999999999886
Q ss_pred hc
Q 000751 533 AT 534 (1303)
Q Consensus 533 ~~ 534 (1303)
..
T Consensus 232 ~~ 233 (247)
T TIGR00972 232 TN 233 (247)
T ss_pred hC
Confidence 53
No 276
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.3e-40 Score=364.67 Aligned_cols=203 Identities=26% Similarity=0.489 Sum_probs=175.0
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCH---HHhhc
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNL---RWLRN 1130 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~---~~lR~ 1130 (1303)
|+++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999643 259999999999999999999999999999999999999999999999999987764 35788
Q ss_pred ceEEEccCCccCc-ccHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHH
Q 000751 1131 HLGLVQQEPIIFS-TTIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAI 1203 (1303)
Q Consensus 1131 ~i~~VpQdp~LF~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaL 1203 (1303)
+++||||+|.+|+ .|++||+.++.. ..+ ++++.++++..++.+.....| .+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALP-----------AELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhcCHHHHHHHHH
Confidence 9999999999998 499999986531 112 234666777777765544333 3799999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEE
Q 000751 1204 ARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRI 1269 (1303)
Q Consensus 1204 ARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~I 1269 (1303)
|||++++|+|+||||||++||+.+.+.+.+.|++..++++|+|+|||+++.+.. ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999875456999999999998875 899999999974
No 277
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=5.1e-41 Score=368.25 Aligned_cols=202 Identities=27% Similarity=0.472 Sum_probs=173.2
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHH---HHhc
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLE---WLRS 385 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~~~ 385 (1303)
|+++|++++|++ ..+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+.. .+|+
T Consensus 2 l~~~~l~~~~~~-~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPG-GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecC-CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 689999999953 224699999999999999999999999999999999999999999999999998776543 4678
Q ss_pred ceEEEeccccccc-HhHHHHHhcCC---CC----CHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHH
Q 000751 386 QIGLVTQEPALLS-LSIRDNIAYGR---DA----TLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSI 457 (1303)
Q Consensus 386 ~i~~v~Q~~~l~~-~ti~~ni~~~~---~~----~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrial 457 (1303)
+|+|++|++.+|. .|++||+.++. .. .++++.++++..++.++..+. ..+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHAL-----------PMQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHHHHH
Confidence 9999999999886 69999998752 11 234556666666665544333 34799999999999
Q ss_pred HHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceE
Q 000751 458 ARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRL 522 (1303)
Q Consensus 458 ARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i 522 (1303)
||||+.+|++|||||||++||+++.+.+.+.|+++. +++|+|+|||+++.+. .||+|++|++|+|
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999998874 4799999999999986 4999999999975
No 278
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-40 Score=371.22 Aligned_cols=218 Identities=27% Similarity=0.408 Sum_probs=187.1
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-----CccEEEECCeeCCCCCHHH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-----VAGQVLLDGRDLKLYNLRW 1127 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~~~~~~ 1127 (1303)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...
T Consensus 3 ~l~~~~l~~~~~~~---~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQV---EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECCe---eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 48999999999643 499999999999999999999999999999999999974 6999999999999888888
Q ss_pred hhcceEEEccCCccC-cccHHHHHHcCCC--C--CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1128 LRNHLGLVQQEPIIF-STTIRENIIYARH--N--AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1128 lR~~i~~VpQdp~LF-~gTIreNl~~g~~--~--~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
+|++++|+||+|.+| +.|++||+.++.. . .+ ++++.++++.+++.+.+. ..+++. ..+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~~----~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK---DRLDAP----AGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh---hhhcCC----cccCCHHHH
Confidence 999999999999765 5799999986531 0 11 235666777777644322 123333 458999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++||||++++|+||||||||++||+.+...+.+.|++... ++|+|+|||+++.+. .||+|++|++|++++.|++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTRE 231 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHH
Confidence 999999999999999999999999999999999999998754 699999999999874 699999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+.+.
T Consensus 232 ~~~~ 235 (250)
T PRK14247 232 VFTN 235 (250)
T ss_pred HHcC
Confidence 9865
No 279
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.5e-40 Score=363.12 Aligned_cols=211 Identities=27% Similarity=0.442 Sum_probs=188.4
Q ss_pred EEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCH----HHhhc
Q 000751 1055 ELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNL----RWLRN 1130 (1303)
Q Consensus 1055 ~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~----~~lR~ 1130 (1303)
.+.|+.|+|+.+ .++++|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 578999999754 359999999999999999999999999999999999999999999999998876543 34577
Q ss_pred ceEEEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcC
Q 000751 1131 HLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKN 1210 (1303)
Q Consensus 1131 ~i~~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~ 1210 (1303)
.++|++|+|.+|+.|++||+.++.+ .++++..++++.+++.+++..+|.|+++.++....+||||||||++||||++++
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999999999999998653 356677888999999999999999999999988899999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHH--HHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCE
Q 000751 1211 APILLLDEASSSIESESSRVVQE--ALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGR 1268 (1303)
Q Consensus 1211 p~ILlLDEaTSaLD~~te~~I~~--~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~ 1268 (1303)
|+||||||||++||+.+...+.+ .++.....++|+|++||+++.+..||++++|++|+
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999998887 45444333689999999999999999999999884
No 280
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-40 Score=386.88 Aligned_cols=215 Identities=25% Similarity=0.464 Sum_probs=186.4
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcc
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNH 1131 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~ 1131 (1303)
..|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+++. .|++
T Consensus 18 ~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 35999999999964 259999999999999999999999999999999999999999999999999987764 4789
Q ss_pred eEEEccCCccCcc-cHHHHHHcCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHH
Q 000751 1132 LGLVQQEPIIFST-TIRENIIYARH--NASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIA 1204 (1303)
Q Consensus 1132 i~~VpQdp~LF~g-TIreNl~~g~~--~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLA 1204 (1303)
++||+|++.+|+. |++|||.|+.. ..+. +++.++++..++.++.++.| .+||||||||++||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRVaLA 161 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKP-----------HQLSGGQRQRVALA 161 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999999999975 99999998642 1222 34556667767665544443 37999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1205 RVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1205 RAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
|||+++|++||||||||+||..+...+.+.|++..++ +.|+|+|||+++.+ ..||+|++|++|++++.|+++++.++.
T Consensus 162 RAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 162 RSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999999999888776432 68999999999975 569999999999999999999998763
No 281
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.7e-40 Score=381.43 Aligned_cols=214 Identities=26% Similarity=0.444 Sum_probs=182.0
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+++|++. ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++... ...+|+++
T Consensus 4 ~i~~~~l~~~~~~~---~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGDK---VVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCCe---EEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 48999999999642 599999999999999999999999999999999999999999999999998764 35678999
Q ss_pred EEEccCCccCc-ccHHHHHHcCCC--CCCHHH----HHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHH
Q 000751 1133 GLVQQEPIIFS-TTIRENIIYARH--NASEAE----VKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIAR 1205 (1303)
Q Consensus 1133 ~~VpQdp~LF~-gTIreNl~~g~~--~~~~~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLAR 1205 (1303)
+||||++.+|+ .|++||+.+... ..+..+ +.++++..++ ++.+++.+ ..||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l-------~~~~~~~~----~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARL-------ESKADVRV----ALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCC-------hhHhcCch----hhCCHHHHHHHHHHH
Confidence 99999999885 699999974211 123332 3334444443 23334444 479999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1206 VVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1206 Allr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
||+++|++|||||||++||+.+.+.+.+.|++...+++|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999999987555789999999999885 5999999999999999999999764
No 282
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=374.02 Aligned_cols=219 Identities=26% Similarity=0.420 Sum_probs=188.3
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEECCeeCCC--CC
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD-----PVAGQVLLDGRDLKL--YN 1124 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~~ 1124 (1303)
..|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 36999999999964 359999999999999999999999999999999999997 579999999999864 34
Q ss_pred HHHhhcceEEEccCCccCcccHHHHHHcCCCC---CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHH
Q 000751 1125 LRWLRNHLGLVQQEPIIFSTTIRENIIYARHN---AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQ 1197 (1303)
Q Consensus 1125 ~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~---~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1197 (1303)
...+|+.++||||+|.+|+.|++||+.++... .+ ++++.++++.+++.+++. .........|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcccCCHHH
Confidence 66788999999999999999999999875321 11 234566677776654432 23445566899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChH
Q 000751 1198 KQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHD 1276 (1303)
Q Consensus 1198 rQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~ 1276 (1303)
|||++||||++++|++|||||||++||+.+...+.+.|++... +.|+|+|||+++.+. .||+|++|++|++++.|+++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 247 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK-NYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTR 247 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999998854 589999999999874 59999999999999999999
Q ss_pred HHhhc
Q 000751 1277 SLLAK 1281 (1303)
Q Consensus 1277 eLl~~ 1281 (1303)
++...
T Consensus 248 ~~~~~ 252 (267)
T PRK14237 248 NIFTN 252 (267)
T ss_pred HHhcC
Confidence 99764
No 283
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=387.01 Aligned_cols=212 Identities=26% Similarity=0.441 Sum_probs=183.5
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.|+++|++++|+ +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++.+.+. .++.|
T Consensus 2 ~L~i~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFG---RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeC---CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 378999999995 3469999999999999999999999999999999999999999999999999987654 35789
Q ss_pred EEEeccccccc-HhHHHHHhcCCC-------CCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHH
Q 000751 388 GLVTQEPALLS-LSIRDNIAYGRD-------ATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKL 455 (1303)
Q Consensus 388 ~~v~Q~~~l~~-~ti~~ni~~~~~-------~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqri 455 (1303)
+||+|++.+|. .|++||+.|+.. .+. +++.++++..++.++.. .....||||||||+
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~LSgGq~QRv 145 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLAD-----------RYPAQLSGGQKQRV 145 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHH
Confidence 99999999996 699999998742 122 34455555555544433 34468999999999
Q ss_pred HHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHh
Q 000751 456 SIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELL 532 (1303)
Q Consensus 456 alARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 532 (1303)
+|||||+++|++||||||||+||+.+...+.+.|+++.+ ++|+|+|||+++.+. .||+|++|++|+|++.|+++++.
T Consensus 146 alArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 146 ALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999999988754 789999999999875 59999999999999999999997
Q ss_pred hcC
Q 000751 533 ATG 535 (1303)
Q Consensus 533 ~~~ 535 (1303)
.+.
T Consensus 226 ~~p 228 (353)
T PRK10851 226 REP 228 (353)
T ss_pred hCc
Confidence 753
No 284
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-40 Score=375.02 Aligned_cols=215 Identities=28% Similarity=0.508 Sum_probs=183.9
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCC--CCHHHhhcc
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKL--YNLRWLRNH 1131 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~--~~~~~lR~~ 1131 (1303)
|+++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|++
T Consensus 2 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPDG--TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCCC--CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 7899999999632 259999999999999999999999999999999999999999999999999852 334568899
Q ss_pred eEEEccCC--ccCcccHHHHHHcCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHH
Q 000751 1132 LGLVQQEP--IIFSTTIRENIIYARH--NASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAI 1203 (1303)
Q Consensus 1132 i~~VpQdp--~LF~gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaL 1203 (1303)
|+|+||+| .+|+.|++||+.++.. ..+. +++.++++.+++.++.. + ....||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-------~----~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFEN-------K----PPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhc-------C----ChhhCCHHHHHHHHH
Confidence 99999998 5788999999986531 1222 34556666666644322 2 234799999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1204 ARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1204 ARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
|||++++|++|||||||++||+.+...+.+.|+++.++++|+|++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999987554689999999999876 5999999999999999999998764
No 285
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-40 Score=370.68 Aligned_cols=215 Identities=27% Similarity=0.412 Sum_probs=187.1
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+++++
T Consensus 2 ~l~~~~l~~~~~~~---~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (258)
T PRK13548 2 MLEARNLSVRLGGR---TLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRR 78 (258)
T ss_pred eEEEEeEEEEeCCe---eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhhe
Confidence 37899999999743 499999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEEccCCcc-CcccHHHHHHcCCCCC------CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHH
Q 000751 1133 GLVQQEPII-FSTTIRENIIYARHNA------SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIAR 1205 (1303)
Q Consensus 1133 ~~VpQdp~L-F~gTIreNl~~g~~~~------~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLAR 1205 (1303)
+|+||++.+ ++.|++||+.++.... .++.+.++++..++.+...+ ....||||||||++|||
T Consensus 79 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgGe~qrv~la~ 147 (258)
T PRK13548 79 AVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGR-----------DYPQLSGGEQQRVQLAR 147 (258)
T ss_pred EEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcC-----------CcccCCHHHHHHHHHHH
Confidence 999999987 6789999998753211 12345667777776554333 23489999999999999
Q ss_pred HHh------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhh-cCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHH
Q 000751 1206 VVL------KNAPILLLDEASSSIESESSRVVQEALDTLI-MGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1206 All------r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||+ .+|++|||||||++||+.+...+.+.|++.. ..++|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 148 al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 227 (258)
T PRK13548 148 VLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAE 227 (258)
T ss_pred HHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHH
Confidence 999 5999999999999999999999999999875 34689999999999876 699999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+.+.
T Consensus 228 ~~~~ 231 (258)
T PRK13548 228 VLTP 231 (258)
T ss_pred HhCh
Confidence 8764
No 286
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=8.9e-41 Score=388.53 Aligned_cols=213 Identities=23% Similarity=0.393 Sum_probs=185.4
Q ss_pred ccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCC--cEEEECCeecCCCCHHHHh
Q 000751 307 GNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTL--GEVLLDGENIKNLKLEWLR 384 (1303)
Q Consensus 307 ~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~--G~i~~~g~~~~~~~~~~~~ 384 (1303)
+.|+++||+++|+ +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++.+.+. .+
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 4 GGIRIDHLRVAYG---ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred eEEEEEEEEEEEC---CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 5799999999995 3469999999999999999999999999999999999999999 999999999987665 35
Q ss_pred cceEEEeccccccc-HhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHH
Q 000751 385 SQIGLVTQEPALLS-LSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLS 456 (1303)
Q Consensus 385 ~~i~~v~Q~~~l~~-~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqria 456 (1303)
+.|+||+|++.+|. .||+|||.|+. ..+. +++.++++..++.++..+. ..+||||||||+|
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~-----------~~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHL-----------PAQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCC-----------hhhCCHHHHHHHH
Confidence 78999999999995 59999999873 2232 3455556666655554443 4589999999999
Q ss_pred HHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC---CCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHh
Q 000751 457 IARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML---GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELL 532 (1303)
Q Consensus 457 lARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~---~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 532 (1303)
|||||+++|++|+||||||+||+.+...+.+.|+++.+ |.|+|+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999987754 789999999999875 59999999999999999999998
Q ss_pred hcC
Q 000751 533 ATG 535 (1303)
Q Consensus 533 ~~~ 535 (1303)
.+.
T Consensus 228 ~~p 230 (362)
T TIGR03258 228 DAP 230 (362)
T ss_pred hCc
Confidence 753
No 287
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.7e-40 Score=367.07 Aligned_cols=212 Identities=29% Similarity=0.452 Sum_probs=183.1
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++|++++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++
T Consensus 1 i~i~~l~~~~~~~---~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGSF---QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECCe---eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 5799999999743 49999999999999999999999999999999999999999999999999987653 478899
Q ss_pred EEccCCccCcc-cHHHHHHcCCCC--CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1134 LVQQEPIIFST-TIRENIIYARHN--AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1134 ~VpQdp~LF~g-TIreNl~~g~~~--~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
|+||+|.+|++ |++||+.++... .+ ++++.++++..++.++..+. ..+||+||+||++||||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~lS~G~~qrl~lara 144 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRY-----------PNQLSGGQRQRVALARA 144 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------hhhCCHHHHHHHHHHHH
Confidence 99999999975 999999875421 11 23455666666665544332 34899999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
++++|+++||||||++||+++.+.+.+.|.+...+ ++|+|++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 145 l~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 145 LAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 99999999999999999999999999999986543 689999999999865 5999999999999999999999864
No 288
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-41 Score=357.01 Aligned_cols=214 Identities=30% Similarity=0.495 Sum_probs=187.6
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCe---eCCCCCHHHhh
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGR---DLKLYNLRWLR 1129 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~---di~~~~~~~lR 1129 (1303)
.|+++|++..|+.- ++++|||++|+.||.+|+.||||||||||+++|.|+..|++|.|.+||. |.+++.. -.
T Consensus 2 ~i~i~~~~~~~~~~---~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~--~~ 76 (345)
T COG1118 2 SIRINNVKKRFGAF---GALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAV--RD 76 (345)
T ss_pred ceeehhhhhhcccc---cccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccch--hh
Confidence 47889999999754 4899999999999999999999999999999999999999999999999 7766443 34
Q ss_pred cceEEEccCCccCc-ccHHHHHHcCCC------C--CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHH
Q 000751 1130 NHLGLVQQEPIIFS-TTIRENIIYARH------N--ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQR 1200 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~-gTIreNl~~g~~------~--~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1200 (1303)
++||+|.|+.-||. .||++||.||.+ . .....+.+.++.++|..+-++-|. +||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP~-----------QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYPA-----------QLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCch-----------hcChHHHHH
Confidence 68999999999995 799999999962 1 224566777888888776666553 899999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchh-HhhcCEEEEEeCCEEEEecChHHH
Q 000751 1201 IAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAM-MRHVDNIVVLNGGRIVEEGTHDSL 1278 (1303)
Q Consensus 1201 laLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~t-i~~~D~Iivl~~G~Ive~Gt~~eL 1278 (1303)
+||||||..+|++||||||.+|||++-.+.+.+-|++...+ +.|+++|||+.+. .+.||||+||++|+|...|+|+|.
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 99999999999999999999999999999999999887554 7899999999974 577999999999999999999999
Q ss_pred hhcC
Q 000751 1279 LAKN 1282 (1303)
Q Consensus 1279 l~~~ 1282 (1303)
....
T Consensus 226 ~~~P 229 (345)
T COG1118 226 YDHP 229 (345)
T ss_pred hcCC
Confidence 8764
No 289
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-40 Score=372.61 Aligned_cols=211 Identities=31% Similarity=0.458 Sum_probs=180.5
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCC---HHHHhc
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLK---LEWLRS 385 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~---~~~~~~ 385 (1303)
++++|++++|++ +.++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 478999999952 257999999999999999999999999999999999999999999999999998776 456788
Q ss_pred ceEEEeccccccc-HhHHHHHhcCCC------------CC---HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCCh
Q 000751 386 QIGLVTQEPALLS-LSIRDNIAYGRD------------AT---LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTE 449 (1303)
Q Consensus 386 ~i~~v~Q~~~l~~-~ti~~ni~~~~~------------~~---~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSg 449 (1303)
.++||+|++.+|. .|++||+.++.. .. .+++.++++.. |++......+..|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV-----------GLLDKAYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc-----------CChhhhCCCcccCCH
Confidence 9999999998886 799999987531 01 12233333333 333344556778999
Q ss_pred HHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEeCceEeecc
Q 000751 450 EQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMG 526 (1303)
Q Consensus 450 GqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g 526 (1303)
|||||++|||||+.+|+||||||||++||+.+...+.+.|+++. .|+|+|++||+++.+. .||++++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 99999999999999999999999999999999999999998874 3899999999999987 59999999999999999
Q ss_pred ChHHHh
Q 000751 527 THDELL 532 (1303)
Q Consensus 527 ~~~~l~ 532 (1303)
+++++.
T Consensus 228 ~~~~~~ 233 (241)
T cd03256 228 PPAELT 233 (241)
T ss_pred CHHHhh
Confidence 988863
No 290
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.3e-40 Score=363.81 Aligned_cols=202 Identities=36% Similarity=0.604 Sum_probs=173.4
Q ss_pred EEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceEE
Q 000751 1055 ELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGL 1134 (1303)
Q Consensus 1055 ~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~ 1134 (1303)
+++||+++|++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 478999999742 1359999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EccCC--ccCcccHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1135 VQQEP--IIFSTTIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1135 VpQdp--~LF~gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
+||+| .+++.|++||+.++.. ..+ ++++.++++..++.+++.+ ....||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDR-----------SPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcC-----------CcccCCHHHHHHHHHHHH
Confidence 99998 3678899999987532 112 2344556666666554433 335899999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCE
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGR 1268 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~ 1268 (1303)
|+++|++|||||||++||+.+.+.+.+.|++...+++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999999875546899999999998876 99999999985
No 291
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-40 Score=374.69 Aligned_cols=220 Identities=27% Similarity=0.464 Sum_probs=189.0
Q ss_pred cccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-----CccEEEECCeeCCC--C
Q 000751 1051 YGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-----VAGQVLLDGRDLKL--Y 1123 (1303)
Q Consensus 1051 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~--~ 1123 (1303)
.+.|+++||+++|+++ ++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~~---~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGDK---QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECCe---eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 3569999999999642 599999999999999999999999999999999999984 89999999999875 4
Q ss_pred CHHHhhcceEEEccCCccCcccHHHHHHcCCC--CC-C----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChH
Q 000751 1124 NLRWLRNHLGLVQQEPIIFSTTIRENIIYARH--NA-S----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPG 1196 (1303)
Q Consensus 1124 ~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1196 (1303)
+...+|++++|+||++.+|++|++||+.++.. .. . ++++.++++.+++.+.+. +..+..+..||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCcccCCHH
Confidence 45678999999999999999999999986521 11 1 234666666666654432 2334556789999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecCh
Q 000751 1197 QKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTH 1275 (1303)
Q Consensus 1197 QrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~ 1275 (1303)
||||++||||++++|+||||||||++||+.+...+.+.|++..+ ++|+|++||+++.+. .||+|++|++|+|++.|++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~ 251 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDT 251 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCH
Confidence 99999999999999999999999999999999999999998865 589999999999875 5999999999999999999
Q ss_pred HHHhhc
Q 000751 1276 DSLLAK 1281 (1303)
Q Consensus 1276 ~eLl~~ 1281 (1303)
+++...
T Consensus 252 ~~~~~~ 257 (272)
T PRK14236 252 DTLFTS 257 (272)
T ss_pred HHHhcC
Confidence 999865
No 292
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-40 Score=380.09 Aligned_cols=226 Identities=25% Similarity=0.383 Sum_probs=187.3
Q ss_pred cEEEEeeEEECCCCC-------CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCH
Q 000751 1053 SIELKNVDFCYPSRP-------EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~-------~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~ 1125 (1303)
-|+++|++++|+.+. ...+|+||||+|++||++||||+||||||||+++|+|+++|++|+|.+||.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999997321 2369999999999999999999999999999999999999999999999999998875
Q ss_pred H---HhhcceEEEccCCc--cCc-ccHHHHHHcCC---CCCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCC
Q 000751 1126 R---WLRNHLGLVQQEPI--IFS-TTIRENIIYAR---HNAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVD 1192 (1303)
Q Consensus 1126 ~---~lR~~i~~VpQdp~--LF~-gTIreNl~~g~---~~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~ 1192 (1303)
+ .+|++|+||+|+|. |++ -||.+|+.... ...+ .+++.++++.+++.+ .+++.. ...
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------~~~~~~----p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP------EHYDRY----PHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh------HHhcCC----Ccc
Confidence 3 56889999999994 555 49999985321 1112 234566677666632 123332 347
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEE
Q 000751 1193 LTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIV 1270 (1303)
Q Consensus 1193 LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Iv 1270 (1303)
||||||||++|||||+.+|+|||+||||++||..+.+.|.+.|+++.++ +.|+|+|||+++.+. .||+|+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999987543 689999999999986 59999999999999
Q ss_pred EecChHHHhhcC-chhHHH
Q 000751 1271 EEGTHDSLLAKN-GLYVRL 1288 (1303)
Q Consensus 1271 e~Gt~~eLl~~~-g~y~~l 1288 (1303)
|.|+.++++++. ..|.+.
T Consensus 235 e~g~~~~~~~~p~hpyt~~ 253 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQA 253 (327)
T ss_pred EECCHHHHhcCCCCHHHHH
Confidence 999999999763 345543
No 293
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-40 Score=370.35 Aligned_cols=210 Identities=29% Similarity=0.474 Sum_probs=179.0
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
++++|++|+|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.|+
T Consensus 3 l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFG---DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEEC---CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 78999999995 3469999999999999999999999999999999999999999999999999876543 257899
Q ss_pred EEeccccccc-HhHHHHHhcCCC---C----CH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHH
Q 000751 389 LVTQEPALLS-LSIRDNIAYGRD---A----TL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLS 456 (1303)
Q Consensus 389 ~v~Q~~~l~~-~ti~~ni~~~~~---~----~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqria 456 (1303)
||+|+|.+|. .|++||+.++.. . +. +++.++++..++ +........+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQL-----------DWLADRYPAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCC-----------hhhhhcChhhCCHHHHHHHH
Confidence 9999999885 699999998631 1 21 223334444443 33334455689999999999
Q ss_pred HHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhh
Q 000751 457 IARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 457 lARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
|||||+.+|++|||||||++||+++.+.+.+.|.++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999988753 789999999999875 599999999999999999998865
Q ss_pred c
Q 000751 534 T 534 (1303)
Q Consensus 534 ~ 534 (1303)
.
T Consensus 227 ~ 227 (239)
T cd03296 227 H 227 (239)
T ss_pred C
Confidence 3
No 294
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-40 Score=371.48 Aligned_cols=218 Identities=26% Similarity=0.433 Sum_probs=184.5
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-----CccEEEECCeeCCCC--CH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-----VAGQVLLDGRDLKLY--NL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~~--~~ 1125 (1303)
.|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 12 ~l~~~~l~~~~~~~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGEK---QALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCCe---eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 69999999999642 499999999999999999999999999999999999985 799999999998653 34
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARH--NASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQ 1199 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1199 (1303)
..+|+.++||||++.+|+.|++||+.++.. ..+. +++.++++.+++.+.+ +..++ .....|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~----~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET---SDRLK----SPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch---hhhhc----CChhhCCHHHHH
Confidence 567889999999999999999999986521 1222 2345566666653222 11223 344589999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHH
Q 000751 1200 RIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSL 1278 (1303)
Q Consensus 1200 RlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eL 1278 (1303)
|++|||||+++|+||||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQI 240 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999998754 699999999999875 5999999999999999999999
Q ss_pred hhc
Q 000751 1279 LAK 1281 (1303)
Q Consensus 1279 l~~ 1281 (1303)
.++
T Consensus 241 ~~~ 243 (258)
T PRK14268 241 FHN 243 (258)
T ss_pred hcC
Confidence 764
No 295
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.2e-40 Score=369.84 Aligned_cols=212 Identities=26% Similarity=0.435 Sum_probs=182.1
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHh-hcce
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWL-RNHL 1132 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~l-R~~i 1132 (1303)
|+++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |+.+
T Consensus 3 i~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDGF---KALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCCe---EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 7899999999742 59999999999999999999999999999999999999999999999999988876644 5679
Q ss_pred EEEccCCccCcc-cHHHHHHcCCCCC--------------CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHH
Q 000751 1133 GLVQQEPIIFST-TIRENIIYARHNA--------------SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQ 1197 (1303)
Q Consensus 1133 ~~VpQdp~LF~g-TIreNl~~g~~~~--------------~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1197 (1303)
+|+||++.+|++ |++||+.++.... .++++.++++.. |++.........|||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~Ge 148 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI-----------GLADEADRLAGLLSHGQ 148 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc-----------CCchhhcCChhhCCHHH
Confidence 999999999986 9999998753210 112233334333 33333444556899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChH
Q 000751 1198 KQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHD 1276 (1303)
Q Consensus 1198 rQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~ 1276 (1303)
|||++||||++++|++|||||||++||+++.+.+.+.|++... ++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 149 ~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~ 227 (242)
T TIGR03411 149 KQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLD 227 (242)
T ss_pred HHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHH
Confidence 9999999999999999999999999999999999999998755 589999999999886 49999999999999999999
Q ss_pred HHhh
Q 000751 1277 SLLA 1280 (1303)
Q Consensus 1277 eLl~ 1280 (1303)
++.+
T Consensus 228 ~~~~ 231 (242)
T TIGR03411 228 QVQA 231 (242)
T ss_pred HHhc
Confidence 9875
No 296
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-40 Score=372.81 Aligned_cols=219 Identities=28% Similarity=0.433 Sum_probs=186.6
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEECCeeCCC--CC
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD-----PVAGQVLLDGRDLKL--YN 1124 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~~ 1124 (1303)
..|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~~---~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGTF---EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECCE---EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 369999999999643 49999999999999999999999999999999999987 589999999999863 56
Q ss_pred HHHhhcceEEEccCCccCcccHHHHHHcCCCC--CC---HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHH
Q 000751 1125 LRWLRNHLGLVQQEPIIFSTTIRENIIYARHN--AS---EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQ 1199 (1303)
Q Consensus 1125 ~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~--~~---~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1199 (1303)
...+|++++||||+|.+|+.|++||+.++... .. ++++.++++.+++.+.+ +........+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDEC-------KDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchh-------hhhhCCCcccCCHHHHH
Confidence 67889999999999999999999999875421 11 34456666666654322 22333445689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhH-hhcCEEEEEeC-----------C
Q 000751 1200 RIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMM-RHVDNIVVLNG-----------G 1267 (1303)
Q Consensus 1200 RlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti-~~~D~Iivl~~-----------G 1267 (1303)
|++|||||+++|++|||||||++||+.+...+.+.|++... ++|+|++||+++.+ ..||+|++|++ |
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g 240 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVG 240 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccc
Confidence 99999999999999999999999999999999999998754 58999999999877 46999999996 7
Q ss_pred EEEEecChHHHhhc
Q 000751 1268 RIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1268 ~Ive~Gt~~eLl~~ 1281 (1303)
+++|.|+++++.+.
T Consensus 241 ~~~~~~~~~~~~~~ 254 (269)
T PRK14259 241 YLVEFNETKKIFNS 254 (269)
T ss_pred eEEEeCCHHHHHhC
Confidence 79999999999864
No 297
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-40 Score=370.78 Aligned_cols=218 Identities=26% Similarity=0.432 Sum_probs=184.3
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc--C---CccEEEECCeeCCCC--CH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD--P---VAGQVLLDGRDLKLY--NL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~--~---~~G~I~idG~di~~~--~~ 1125 (1303)
.|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++... +.
T Consensus 5 ~l~~~~l~~~~~~~---~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNKK---KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECCe---eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 48999999999743 49999999999999999999999999999999999954 6 489999999998653 34
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCC--C-CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARH--N-AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~-~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
..+|++++||||+|.+|+.|++||+.++.. . .. ++++.++++.+++.+.+. +.......+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCHHHH
Confidence 577889999999999999999999986421 1 11 234455666666543332 223445568999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++||||++++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+. .||+|++|++|++++.|++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQ 233 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999998755 589999999999765 599999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+.+.
T Consensus 234 ~~~~ 237 (252)
T PRK14239 234 MFMN 237 (252)
T ss_pred HHhC
Confidence 9865
No 298
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.2e-40 Score=364.42 Aligned_cols=199 Identities=27% Similarity=0.467 Sum_probs=170.8
Q ss_pred EEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceEE
Q 000751 1055 ELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGL 1134 (1303)
Q Consensus 1055 ~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~ 1134 (1303)
+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. .+|++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 46899999964 25999999999999999999999999999999999999999999999998764 47889999
Q ss_pred EccCCcc---CcccHHHHHHcCCCC----------CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHH
Q 000751 1135 VQQEPII---FSTTIRENIIYARHN----------ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRI 1201 (1303)
Q Consensus 1135 VpQdp~L---F~gTIreNl~~g~~~----------~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1201 (1303)
|||+|.+ |+.|++||+.++... ..++++.++++..++.++..+. ..+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQ-----------IGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCC-----------cccCCHHHHHHH
Confidence 9999986 668999999875321 1134567777777776655432 347999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEEEEec
Q 000751 1202 AIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1202 aLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~G 1273 (1303)
+|||||+++|++|||||||++||+.+.+.+.+.|++..++++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999999999875456899999999998864 8999999886 66654
No 299
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-40 Score=371.90 Aligned_cols=219 Identities=26% Similarity=0.434 Sum_probs=184.4
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEECCeeCCC--CCH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD-----PVAGQVLLDGRDLKL--YNL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~~~ 1125 (1303)
.|+++||+|+|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~~---~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGNY---EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECCe---eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 48999999999643 59999999999999999999999999999999999997 479999999999864 345
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCCC--C-C----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARHN--A-S----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~--~-~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
..+|+.++|++|+|.+|+.|++||+.++... . . ++++.++++.+++++.. + ........+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~----~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET---K----DNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch---H----HHhccChhhCCHHHH
Confidence 6778899999999999999999999865321 1 1 23445556665553211 1 112334568999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++||||++++|++|||||||++||+++.+.+.+.|++... ++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEE 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999998754 5899999999998754 99999999999999999999
Q ss_pred HhhcC
Q 000751 1278 LLAKN 1282 (1303)
Q Consensus 1278 Ll~~~ 1282 (1303)
+....
T Consensus 233 ~~~~~ 237 (251)
T PRK14251 233 MFIAP 237 (251)
T ss_pred HHhCC
Confidence 97653
No 300
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-40 Score=374.88 Aligned_cols=218 Identities=27% Similarity=0.460 Sum_probs=188.6
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
-|+++||+|+|++....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.|
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999643234699999999999999999999999999999999999999999999999999877777888999
Q ss_pred EEEeccc--ccccHhHHHHHhcCC---CCCHH----HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHH
Q 000751 388 GLVTQEP--ALLSLSIRDNIAYGR---DATLD----QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIA 458 (1303)
Q Consensus 388 ~~v~Q~~--~l~~~ti~~ni~~~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialA 458 (1303)
+||+|+| .++..|+.|||.++. ..+.+ ++.++++.+++.++.. .....||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKT-----------REPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHHHHHH
Confidence 9999998 366889999998763 23333 3455566666654433 23468999999999999
Q ss_pred HhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhcCh
Q 000751 459 RAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLATGD 536 (1303)
Q Consensus 459 Ral~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 536 (1303)
|||+++|++|||||||++||+.+.+.+.+.+.++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++....+
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 232 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFATSE 232 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHH
Confidence 999999999999999999999999999999988753 899999999999988899999999999999999999876543
No 301
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-40 Score=371.74 Aligned_cols=218 Identities=23% Similarity=0.414 Sum_probs=185.0
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc--C---CccEEEECCeeCCC--CCH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD--P---VAGQVLLDGRDLKL--YNL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~--~---~~G~I~idG~di~~--~~~ 1125 (1303)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|++||.++.. .+.
T Consensus 12 ~l~i~~l~~~~~~~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQH---HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECCe---eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 48999999999743 49999999999999999999999999999999999997 3 58999999999864 455
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCCC---CCHH----HHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARHN---ASEA----EVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~---~~~~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
..+|++++|+||+|.+|+.|++||+.++... .+++ ++.++++..++.+++. ........+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHH
Confidence 6788999999999999999999999865321 1222 3444555666544332 223345568999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++||||++++|+||||||||++||+.+...+.+.|++... ++|+|+|||+++.+. .||+|++|++|++++.|++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 240 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNK 240 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999998754 589999999999875 599999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+..+
T Consensus 241 ~~~~ 244 (259)
T PRK14274 241 MFSN 244 (259)
T ss_pred HhhC
Confidence 8765
No 302
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-40 Score=369.75 Aligned_cols=219 Identities=28% Similarity=0.477 Sum_probs=186.1
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-----CccEEEECCeeCCC--CC
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-----VAGQVLLDGRDLKL--YN 1124 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~--~~ 1124 (1303)
|.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 2 ~~l~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGDF---QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 568999999999743 499999999999999999999999999999999999863 68999999999875 45
Q ss_pred HHHhhcceEEEccCCccCcccHHHHHHcCCC--CC-----CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHH
Q 000751 1125 LRWLRNHLGLVQQEPIIFSTTIRENIIYARH--NA-----SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQ 1197 (1303)
Q Consensus 1125 ~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-----~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1197 (1303)
...+|++++||||+|.+|+.|++||+.++.. .. .++++.++++.+++.+.+. ........+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCHHH
Confidence 5678999999999999999999999987531 11 1234555666666543332 12334456899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChH
Q 000751 1198 KQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHD 1276 (1303)
Q Consensus 1198 rQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~ 1276 (1303)
|||++||||++.+|++|||||||++||+.+...+.+.|++... ++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~ 230 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK-DYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTV 230 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999998754 689999999999775 59999999999999999999
Q ss_pred HHhhc
Q 000751 1277 SLLAK 1281 (1303)
Q Consensus 1277 eLl~~ 1281 (1303)
++...
T Consensus 231 ~~~~~ 235 (250)
T PRK14240 231 DLFTN 235 (250)
T ss_pred HHHhC
Confidence 98764
No 303
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.7e-40 Score=371.80 Aligned_cols=214 Identities=26% Similarity=0.401 Sum_probs=186.1
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++|++++|++. ++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 2 l~~~~l~~~~~~~---~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGGR---LIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECCE---EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 6899999999643 5999999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEccCCc-cCcccHHHHHHcCCCC----------CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHH
Q 000751 1134 LVQQEPI-IFSTTIRENIIYARHN----------ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIA 1202 (1303)
Q Consensus 1134 ~VpQdp~-LF~gTIreNl~~g~~~----------~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1202 (1303)
|+||+|. .+..|++||+.++... ..++++.++++.+++.+... .....||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLAD-----------RDMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCHHHHHHHH
Confidence 9999995 4568999999875310 01234566666666654432 234589999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1203 IARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1203 LARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
||||++.+|+++||||||++||+.+...+.+.|++...+++|+|++||+++.+ ..||+|++|++|++++.|+++++...
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLTP 227 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhCH
Confidence 99999999999999999999999999999999998755468999999999988 56999999999999999999998753
No 304
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.5e-40 Score=371.63 Aligned_cols=210 Identities=27% Similarity=0.410 Sum_probs=179.3
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCH---HHHhc
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKL---EWLRS 385 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~~~ 385 (1303)
|+++||+++|+ .+.++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+++
T Consensus 2 l~~~~l~~~~~--~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYP--NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecC--CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 68999999995 13579999999999999999999999999999999999999999999999999887654 34678
Q ss_pred ceEEEeccccccc-HhHHHHHhcCCC-C-----------C---HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCCh
Q 000751 386 QIGLVTQEPALLS-LSIRDNIAYGRD-A-----------T---LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTE 449 (1303)
Q Consensus 386 ~i~~v~Q~~~l~~-~ti~~ni~~~~~-~-----------~---~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSg 449 (1303)
+++||+|++.+|. .|++||+.++.. . . ++++.++++..+ ++........+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVG-----------LADKAYQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcC-----------cHhhhcCCcccCCH
Confidence 8999999998886 699999987631 1 1 122333333333 33344556678999
Q ss_pred HHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEeCceEeecc
Q 000751 450 EQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMG 526 (1303)
Q Consensus 450 GqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g 526 (1303)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+. .||++++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999998874 3789999999999985 59999999999999999
Q ss_pred ChHHH
Q 000751 527 THDEL 531 (1303)
Q Consensus 527 ~~~~l 531 (1303)
+++++
T Consensus 229 ~~~~~ 233 (243)
T TIGR02315 229 APSEL 233 (243)
T ss_pred CHHHh
Confidence 99886
No 305
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.6e-40 Score=384.34 Aligned_cols=209 Identities=26% Similarity=0.438 Sum_probs=178.1
Q ss_pred ceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCe----eCCCCCHHHhh----cceEEEccCCcc
Q 000751 1070 LVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGR----DLKLYNLRWLR----NHLGLVQQEPII 1141 (1303)
Q Consensus 1070 ~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~----di~~~~~~~lR----~~i~~VpQdp~L 1141 (1303)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. ++...+.+.+| ++|+||+|++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 5899999999999999999999999999999999999999999999996 67777665543 589999999999
Q ss_pred Cc-ccHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEE
Q 000751 1142 FS-TTIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPIL 1214 (1303)
Q Consensus 1142 F~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~IL 1214 (1303)
|+ .|++||+.++.. ..+ .+.+.++++.+++.++....| .+||||||||++|||||+++|+||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~-----------~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP-----------GELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 98 699999987632 112 234566777777765544333 379999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHhhc-CchhHHHH
Q 000751 1215 LLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLLAK-NGLYVRLM 1289 (1303)
Q Consensus 1215 lLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl~~-~g~y~~l~ 1289 (1303)
|||||||+||+.+.+.+++.|.++.++ ++|+|+|||+++.+ +.||+|++|++|++++.|++++++.+ .+.|.+.+
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~~~~ 264 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVADF 264 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHHHHH
Confidence 999999999999999999999987543 68999999999986 66999999999999999999999875 34454433
No 306
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-40 Score=364.71 Aligned_cols=202 Identities=32% Similarity=0.517 Sum_probs=172.1
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+. .++.|+
T Consensus 1 l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYG---SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeC---CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 47899999995 3579999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EEeccccccc-HhHHHHHhcCCC---CCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHh
Q 000751 389 LVTQEPALLS-LSIRDNIAYGRD---ATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARA 460 (1303)
Q Consensus 389 ~v~Q~~~l~~-~ti~~ni~~~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARa 460 (1303)
||+|++.+|. .|++||+.++.. .+. +++.++++..++.++ ......+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGL-----------LNRYPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhcChhhCCHHHHHHHHHHHH
Confidence 9999998885 699999987631 222 234444555544433 334446899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEeCceEeecc
Q 000751 461 VLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMG 526 (1303)
Q Consensus 461 l~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g 526 (1303)
|+++|++|||||||++||+.+...+.+.|+++. .++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999998874 3899999999999875 49999999999998765
No 307
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-40 Score=378.38 Aligned_cols=216 Identities=21% Similarity=0.396 Sum_probs=181.7
Q ss_pred EEEEEEEEEcCCCC--CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCC---------
Q 000751 309 IEFRNVYFSYLSRP--EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKN--------- 377 (1303)
Q Consensus 309 i~~~~v~f~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~--------- 377 (1303)
|+++|++|+|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 78999999996321 1369999999999999999999999999999999999999999999999887632
Q ss_pred ---------------CCHHHHhcceEEEeccc--ccccHhHHHHHhcCC---CCCHHH----HHHHHHHhcchHHHHhcc
Q 000751 378 ---------------LKLEWLRSQIGLVTQEP--ALLSLSIRDNIAYGR---DATLDQ----IEEAAKIAHAHTFISSLE 433 (1303)
Q Consensus 378 ---------------~~~~~~~~~i~~v~Q~~--~l~~~ti~~ni~~~~---~~~~~~----~~~~~~~~~~~~~i~~l~ 433 (1303)
.+...+++.||||+|+| .+|..||+|||.|+. ..+.++ +.++++.+++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------ 156 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDE------ 156 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCCh------
Confidence 13456788999999986 688899999999874 233333 344444444421
Q ss_pred cccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccc-ccc
Q 000751 434 KGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLI-RNA 511 (1303)
Q Consensus 434 ~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~-~~~ 511 (1303)
.........||||||||++|||||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+ +.|
T Consensus 157 ----~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~a 232 (305)
T PRK13651 157 ----SYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWT 232 (305)
T ss_pred ----hhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhC
Confidence 22345567899999999999999999999999999999999999999999998874 489999999999976 469
Q ss_pred CEEEEEeCceEeeccChHHHhhc
Q 000751 512 DYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 512 d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
|+|++|++|+|++.|+.+++.+.
T Consensus 233 drv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 233 KRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999998654
No 308
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.5e-40 Score=365.71 Aligned_cols=210 Identities=28% Similarity=0.422 Sum_probs=179.1
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
|+++||+++|++. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++... ...++++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEE
Confidence 5789999999531 25799999999999999999999999999999999999999999999999998754 356778899
Q ss_pred EEecccccc-cHhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHh
Q 000751 389 LVTQEPALL-SLSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARA 460 (1303)
Q Consensus 389 ~v~Q~~~l~-~~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARa 460 (1303)
||+|++.+| ..|++||+.++. .... +++.++++..++.+. ......+||||||||++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la~a 147 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDK-----------ANKRARTLSGGMKRKLSLAIA 147 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------HhChhhhCCHHHHHHHHHHHH
Confidence 999999988 579999998752 1222 234444554444332 233345799999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 461 VLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 461 l~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
++.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999998877899999999999986 4999999999999999998765
No 309
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.6e-40 Score=389.31 Aligned_cols=220 Identities=24% Similarity=0.422 Sum_probs=192.4
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+++...++++|
T Consensus 3 ~L~~~nls~~y~---~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFG---DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEEC---CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 489999999995 35799999999999999999999999999999999999999999999999999999988999999
Q ss_pred EEEeccccc-ccHhHHHHHhcCC-C----------CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHH
Q 000751 388 GLVTQEPAL-LSLSIRDNIAYGR-D----------ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKL 455 (1303)
Q Consensus 388 ~~v~Q~~~l-~~~ti~~ni~~~~-~----------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqri 455 (1303)
|||+|++.+ |+.|++||+.+++ . .+.+++.++++..++.++.. .....||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~-----------~~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFAD-----------RPVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHH
Confidence 999999987 5789999999874 1 12345666777777655443 33468999999999
Q ss_pred HHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhh
Q 000751 456 SIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 456 alARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
+|||||+++|+||||||||++||+.+...+.+.|+++. +++|+|++||+++.+. .||++++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999998875 5889999999999985 599999999999999999999876
Q ss_pred cChhHHHHH
Q 000751 534 TGDLYAELL 542 (1303)
Q Consensus 534 ~~~~~~~~~ 542 (1303)
. ....+.+
T Consensus 229 ~-~~l~~~~ 236 (402)
T PRK09536 229 A-DTLRAAF 236 (402)
T ss_pred c-HHHHHHh
Confidence 4 3334443
No 310
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-40 Score=370.94 Aligned_cols=233 Identities=24% Similarity=0.394 Sum_probs=191.5
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-----CccEEEECCeeCCCCC-HH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-----VAGQVLLDGRDLKLYN-LR 1126 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~~~-~~ 1126 (1303)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ..
T Consensus 21 ~l~i~nl~~~~~~~---~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAGK---TVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECCE---EEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 58999999999743 599999999999999999999999999999999999986 6999999999998763 45
Q ss_pred HhhcceEEEccCCccCcccHHHHHHcCCC---CCCHHHHH----HHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHH
Q 000751 1127 WLRNHLGLVQQEPIIFSTTIRENIIYARH---NASEAEVK----EAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQ 1199 (1303)
Q Consensus 1127 ~lR~~i~~VpQdp~LF~gTIreNl~~g~~---~~~~~ei~----~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1199 (1303)
.+|++++|+||+|.+|+.|+++|+.++.. ..+++++. +.++.+++.+. +++.+.....+|||||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~l~~~~~~LSgGq~q 170 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDA-------VKDRLSDSPFRLSGGQQQ 170 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCch-------hhhHhhCCcccCCHHHHH
Confidence 77899999999999999999999987531 12444432 33444444222 223344556789999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHH
Q 000751 1200 RIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSL 1278 (1303)
Q Consensus 1200 RlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eL 1278 (1303)
|++||||++++|+||||||||++||+.+.+.+.+.|++... ++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~ 249 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQL 249 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999998765 489999999999875 5999999999999999999999
Q ss_pred hhcCc--hhHHHHhhhhhcc
Q 000751 1279 LAKNG--LYVRLMQPHYGKG 1296 (1303)
Q Consensus 1279 l~~~g--~y~~l~~~~~~~~ 1296 (1303)
.+... .-+.+.....++-
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~ 269 (276)
T PRK14271 250 FSSPKHAETARYVAGLSGDV 269 (276)
T ss_pred HhCcCcHHHHHHHhhcCCcc
Confidence 87532 2233444444443
No 311
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.3e-40 Score=367.00 Aligned_cols=215 Identities=27% Similarity=0.407 Sum_probs=178.8
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHH-hcce
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWL-RSQI 387 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-~~~i 387 (1303)
|+++||+++|+ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.... +++|
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYG---KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecC---CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 57899999995 3479999999999999999999999999999999999999999999999999988776554 6789
Q ss_pred EEEecccccccH-hHHHHHhcCCC-CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCC
Q 000751 388 GLVTQEPALLSL-SIRDNIAYGRD-ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNP 465 (1303)
Q Consensus 388 ~~v~Q~~~l~~~-ti~~ni~~~~~-~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~ 465 (1303)
+|++|++.+|.. |++||+.++.. ....+..+.+ .+.++.++ +++.........||||||||++||||++++|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARL-----ERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHH-----HHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999998875 99999998642 1111111111 11222221 1233344566789999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHh
Q 000751 466 SILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELL 532 (1303)
Q Consensus 466 ~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 532 (1303)
++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+.+++.
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999999999998875 5799999999999875 49999999999999999988764
No 312
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-40 Score=370.41 Aligned_cols=218 Identities=27% Similarity=0.448 Sum_probs=185.1
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcc---ccC--CccEEEECCeeCCCC--CH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERF---YDP--VAGQVLLDGRDLKLY--NL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl---~~~--~~G~I~idG~di~~~--~~ 1125 (1303)
.|+++|+++.|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 5899999999964 2499999999999999999999999999999999997 454 589999999998764 34
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCCC--C-----CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARHN--A-----SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~--~-----~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
..+|++++||||+|.+|+.|++||+.++... . .++++.++++.+++.+++. +.......+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCHHHH
Confidence 6778899999999999999999999865311 1 1234556666666543332 233455668999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++||||++++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+ ..||+|++|++|++++.|++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~ 231 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKK-DYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKK 231 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999998754 69999999999987 4599999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+.+.
T Consensus 232 ~~~~ 235 (250)
T PRK14245 232 IFTN 235 (250)
T ss_pred HhcC
Confidence 9865
No 313
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-40 Score=371.29 Aligned_cols=216 Identities=25% Similarity=0.404 Sum_probs=188.8
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcc
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNH 1131 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~ 1131 (1303)
-.|+++||+++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++
T Consensus 6 ~~l~i~~l~~~~~~~---~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGKY---TVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECCE---EEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 369999999999742 59999999999999999999999999999999999999999999999999998888888899
Q ss_pred eEEEccCCccCc-ccHHHHHHcCC-CC---------CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHH
Q 000751 1132 LGLVQQEPIIFS-TTIRENIIYAR-HN---------ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQR 1200 (1303)
Q Consensus 1132 i~~VpQdp~LF~-gTIreNl~~g~-~~---------~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1200 (1303)
++||||++.+|. .|++||+.++. +. ..++.+.++++..++.++..+ ....||||||||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qr 151 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQ-----------SVDTLSGGQRQR 151 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcC-----------CcccCChHHHHH
Confidence 999999998875 69999998752 10 112356677777777655433 345899999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHH
Q 000751 1201 IAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSL 1278 (1303)
Q Consensus 1201 laLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eL 1278 (1303)
++||||++++|++|||||||++||+.+.+.+.+.|+++.+. ++|+|++||+++.+ ..||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 152 AWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999987542 68999999999976 45999999999999999999998
Q ss_pred hhc
Q 000751 1279 LAK 1281 (1303)
Q Consensus 1279 l~~ 1281 (1303)
...
T Consensus 232 ~~~ 234 (265)
T PRK10253 232 VTA 234 (265)
T ss_pred hhH
Confidence 753
No 314
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-40 Score=369.27 Aligned_cols=218 Identities=28% Similarity=0.473 Sum_probs=186.3
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCC-----ccEEEECCeeCCC--CCH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPV-----AGQVLLDGRDLKL--YNL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~-----~G~I~idG~di~~--~~~ 1125 (1303)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|. +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~~---~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHKH---QVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECCe---eEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 58999999999642 4999999999999999999999999999999999999987 6999999999865 345
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCCC--C-C----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARHN--A-S----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~--~-~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
..+|+.++||||+|.+|+.|++||+.++... . . ++.+.++++..++++.+. ........+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCHHHH
Confidence 6789999999999999999999999875311 1 1 223444555566554332 223455678999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++||||++++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGE 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHH
Confidence 99999999999999999999999999999999999999874 46999999999998765 79999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14249 233 IFSR 236 (251)
T ss_pred HHhC
Confidence 9765
No 315
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=6.2e-40 Score=370.48 Aligned_cols=231 Identities=26% Similarity=0.454 Sum_probs=191.6
Q ss_pred cEEEEeeEEECCCC------CCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHH
Q 000751 1053 SIELKNVDFCYPSR------PEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLR 1126 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~------~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~ 1126 (1303)
.|+++||+++|+.. ...++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999631 123699999999999999999999999999999999999999999999999999766666
Q ss_pred HhhcceEEEccCCc--cCc-ccHHHHHHcCC---CCCC----HHHHHHHHHHhchH-HHHHhCCCCcccccCCCCCCCCh
Q 000751 1127 WLRNHLGLVQQEPI--IFS-TTIRENIIYAR---HNAS----EAEVKEAARIANAH-HFISSLPHGYDTHVGMRGVDLTP 1195 (1303)
Q Consensus 1127 ~lR~~i~~VpQdp~--LF~-gTIreNl~~g~---~~~~----~~ei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSg 1195 (1303)
..|++++||||+|. +++ -|+.+|+.++. .... ++++.++++.+++. +... . ...+|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~----~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHAS-------Y----YPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHh-------c----CchhcCH
Confidence 67788999999985 444 38999986431 1111 24566777777763 3322 2 2247999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhh-cCEEEEEeCCEEEEec
Q 000751 1196 GQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1196 GQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~G 1273 (1303)
|||||++||||++++|+||||||||++||+.+.+.+.+.|++..++ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999999999999999987542 6899999999999876 9999999999999999
Q ss_pred ChHHHhhcC--chhHHHHhhhhh
Q 000751 1274 THDSLLAKN--GLYVRLMQPHYG 1294 (1303)
Q Consensus 1274 t~~eLl~~~--g~y~~l~~~~~~ 1294 (1303)
+++++.+.. ..+++++..+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~ 255 (267)
T PRK15112 233 STADVLASPLHELTKRLIAGHFG 255 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHhccC
Confidence 999998763 457777765543
No 316
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-40 Score=370.25 Aligned_cols=221 Identities=26% Similarity=0.462 Sum_probs=183.4
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHh-hcc
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWL-RNH 1131 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~l-R~~ 1131 (1303)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999964 359999999999999999999999999999999999999999999999999998876554 456
Q ss_pred eEEEccCCccCcc-cHHHHHHcCCCCC---------------CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCCh
Q 000751 1132 LGLVQQEPIIFST-TIRENIIYARHNA---------------SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTP 1195 (1303)
Q Consensus 1132 i~~VpQdp~LF~g-TIreNl~~g~~~~---------------~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1195 (1303)
++|+||+|.+|++ |++||+.++.... .+.+ .+. .....++++.+ |++........+|||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~l~~~--gl~~~~~~~~~~LS~ 156 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAE-SEA--LDRAATWLERV--GLLEHANRQAGNLAY 156 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccch-hHH--HHHHHHHHHhC--ChhhhhhCChhhCCH
Confidence 9999999999986 9999998753110 0000 000 01122333333 444444555668999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhh-cCEEEEEeCCEEEEec
Q 000751 1196 GQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1196 GQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~G 1273 (1303)
|||||++||||++++|++|||||||++||+.+.+.+.+.|.+..++ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 157 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 236 (255)
T PRK11300 157 GQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANG 236 (255)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecC
Confidence 9999999999999999999999999999999999999999987543 6899999999998854 9999999999999999
Q ss_pred ChHHHhhc
Q 000751 1274 THDSLLAK 1281 (1303)
Q Consensus 1274 t~~eLl~~ 1281 (1303)
+++++.+.
T Consensus 237 ~~~~~~~~ 244 (255)
T PRK11300 237 TPEEIRNN 244 (255)
T ss_pred CHHHHhhC
Confidence 99998754
No 317
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=372.51 Aligned_cols=217 Identities=27% Similarity=0.453 Sum_probs=184.2
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEECCeeCCCCC--HH
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD-----PVAGQVLLDGRDLKLYN--LR 1126 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~~~--~~ 1126 (1303)
-+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |.+|+|+++|.++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 478999999963 259999999999999999999999999999999999986 46999999999987653 34
Q ss_pred HhhcceEEEccCCccCcccHHHHHHcCCC--CC------CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1127 WLRNHLGLVQQEPIIFSTTIRENIIYARH--NA------SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1127 ~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~------~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
.+|++++||||++.+|++|++||+.++.. +. .++++.++++..++.+.+ .+.+...+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEEL-------GDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhcChhhCCHHHH
Confidence 67889999999999999999999986521 11 123455666666654332 1233445668999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++||||++++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+. .||+|++|++|++++.|++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 234 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKK-NFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQE 234 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999998754 699999999999876 599999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+.+.
T Consensus 235 ~~~~ 238 (251)
T PRK14244 235 IFKN 238 (251)
T ss_pred HhcC
Confidence 9865
No 318
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.1e-40 Score=381.74 Aligned_cols=214 Identities=29% Similarity=0.472 Sum_probs=183.4
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+++|++. .+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+ ...|++|
T Consensus 41 ~i~i~nl~k~y~~~---~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGDK---AVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECCE---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 59999999999643 4999999999999999999999999999999999999999999999999997654 5678999
Q ss_pred EEEccCCccC-cccHHHHHHcCCC--CCCHHH----HHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHH
Q 000751 1133 GLVQQEPIIF-STTIRENIIYARH--NASEAE----VKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIAR 1205 (1303)
Q Consensus 1133 ~~VpQdp~LF-~gTIreNl~~g~~--~~~~~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLAR 1205 (1303)
+||||++.+| ..|++||+.+... ..+.++ +.++++.++ +++..++.++ +||||||||++|||
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~-------L~~~~~~~~~----~LS~G~kqrv~lA~ 185 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFAR-------LESKADARVS----DLSGGMKRRLTLAR 185 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-------CchhhCCChh----hCCHHHHHHHHHHH
Confidence 9999999987 4699999975321 122222 223333333 3444555554 79999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1206 VVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1206 Allr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
||+.+|++|||||||++||+.+.+.+++.|++....++|+|++||+++.+. .||+|++|++|+|++.|+++++.++
T Consensus 186 aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 186 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999999987655799999999999885 5999999999999999999999764
No 319
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-40 Score=372.78 Aligned_cols=218 Identities=26% Similarity=0.415 Sum_probs=184.1
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEECCeeCCC--CCH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD-----PVAGQVLLDGRDLKL--YNL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~~~ 1125 (1303)
.|+++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++.. .+.
T Consensus 21 ~l~~~~l~~~~~~~---~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGEK---RAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCCc---eeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 58999999999642 49999999999999999999999999999999999865 689999999999875 345
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCCC--C-C----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARHN--A-S----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~--~-~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
..+|++++|+||+|.+|++|++||+.++... . . ++.+.++++.+++.+.+. ........+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccCCHHHH
Confidence 5778899999999999999999999865211 0 1 233555565555532211 122344568999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++|||||+++|+||||||||++||+.+...+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 249 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQ 249 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999998755 589999999999765 699999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+..+
T Consensus 250 ~~~~ 253 (268)
T PRK14248 250 IFTS 253 (268)
T ss_pred HHhC
Confidence 9865
No 320
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=4e-40 Score=362.61 Aligned_cols=205 Identities=23% Similarity=0.405 Sum_probs=175.1
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHH---Hhhc
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLR---WLRN 1130 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~---~lR~ 1130 (1303)
|+++||+++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++.+++.. .+|+
T Consensus 2 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLGG--RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecCC--CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 7899999999532 2599999999999999999999999999999999999999999999999999887654 3688
Q ss_pred ceEEEccCCccC-cccHHHHHHcCC--CCCCHH----HHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHH
Q 000751 1131 HLGLVQQEPIIF-STTIRENIIYAR--HNASEA----EVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAI 1203 (1303)
Q Consensus 1131 ~i~~VpQdp~LF-~gTIreNl~~g~--~~~~~~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaL 1203 (1303)
+++|+||+|.+| +.|++||+.++. ...+++ ++.++++..++.++..+. ..+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNF-----------PIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------chhCCHHHHHHHHH
Confidence 999999999875 679999998752 112322 345666666665544332 34899999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEEEE
Q 000751 1204 ARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRIVE 1271 (1303)
Q Consensus 1204 ARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive 1271 (1303)
|||++++|++|||||||++||+.+.+.+.+.|++..++++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999999875556899999999998865 89999999999864
No 321
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.5e-40 Score=361.15 Aligned_cols=198 Identities=29% Similarity=0.474 Sum_probs=171.9
Q ss_pred EEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEE
Q 000751 310 EFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGL 389 (1303)
Q Consensus 310 ~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 389 (1303)
+++|++++|++ .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...+++|+|
T Consensus 1 ~~~~l~~~~~~--~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKK--GTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCC--cCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 36899999952 1579999999999999999999999999999999999999999999999998754 456778999
Q ss_pred Eeccc--ccccHhHHHHHhcCC-C--CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccC
Q 000751 390 VTQEP--ALLSLSIRDNIAYGR-D--ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLN 464 (1303)
Q Consensus 390 v~Q~~--~l~~~ti~~ni~~~~-~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~ 464 (1303)
++|++ .++..|++||+.++. . ..++++.++++..++.++..+.| ..||||||||++|||||+.+
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhC
Confidence 99998 467889999999864 1 22346777777777765544433 47999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCCeEEEEecCCcccc-ccCEEEEEeCceEe
Q 000751 465 PSILLLDEVTGGLDFEAERAVQEALDLL-MLGRSTIIIARRLSLIR-NADYIAVMDEGRLF 523 (1303)
Q Consensus 465 ~~ililDe~ts~lD~~~~~~i~~~l~~~-~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~ 523 (1303)
|++|||||||++||+.+.+.+.+.|+++ .+++|+|++||+++.+. .||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999887 46899999999999986 49999999999975
No 322
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-40 Score=369.40 Aligned_cols=218 Identities=27% Similarity=0.476 Sum_probs=185.9
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-----CccEEEECCeeCCCC--CH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-----VAGQVLLDGRDLKLY--NL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~~--~~ 1125 (1303)
.|+++||+++|++. ++|+|+||+|++||+++|+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~~~---~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGEK---KAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCCc---eeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 48999999999642 599999999999999999999999999999999999984 899999999998753 34
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCCC---CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARHN---AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~---~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
..+|++++|+||+|.+|+.|++||+.++... .. ++++.++++..++.+.+. ........+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVK-------SELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhH-------HHHhCChhhcCHHHH
Confidence 5678899999999999999999999864211 11 233556666666644332 223445668999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++||||++++|+||||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+ ..||+|++|++|++++.|++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTRE 231 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHH
Confidence 999999999999999999999999999999999999998755 59999999999976 4599999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+.++
T Consensus 232 ~~~~ 235 (250)
T PRK14262 232 IVER 235 (250)
T ss_pred HHhC
Confidence 9865
No 323
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-40 Score=375.03 Aligned_cols=214 Identities=26% Similarity=0.463 Sum_probs=185.0
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecC--CCCHHHHhc
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIK--NLKLEWLRS 385 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~--~~~~~~~~~ 385 (1303)
-|+++|++|+|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999952 356999999999999999999999999999999999999999999999999984 344567889
Q ss_pred ceEEEeccc--ccccHhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHH
Q 000751 386 QIGLVTQEP--ALLSLSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLS 456 (1303)
Q Consensus 386 ~i~~v~Q~~--~l~~~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqria 456 (1303)
.|+||+|++ .+|+.|++||+.++. ..+. +++.++++..++.+ .......+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-----------~~~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEH-----------LKDKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChh-----------hhhCCcccCCHHHHHHHH
Confidence 999999998 578899999998753 2232 23444555555543 334556789999999999
Q ss_pred HHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhh
Q 000751 457 IARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 457 lARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
|||||+.+|++|||||||++||+.+...+.+.|+++.+ |+|+|++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999988753 899999999999986 599999999999999999999876
Q ss_pred c
Q 000751 534 T 534 (1303)
Q Consensus 534 ~ 534 (1303)
.
T Consensus 232 ~ 232 (283)
T PRK13636 232 E 232 (283)
T ss_pred C
Confidence 4
No 324
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-40 Score=361.21 Aligned_cols=202 Identities=25% Similarity=0.476 Sum_probs=171.8
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 578999999964 259999999999999999999999999999999999999999999999998753 5678999
Q ss_pred EEccCCccCcc-cHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1134 LVQQEPIIFST-TIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1134 ~VpQdp~LF~g-TIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
|+||++.+|++ |++||+.++.. ..+ ++++.++++..++.+.. .....+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la~a 142 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYA-----------NKRVEELSKGNQQKVQFIAA 142 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHH-----------hCcHhhCCHHHHHHHHHHHH
Confidence 99999999975 99999976421 111 23344555555544333 33445899999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEec
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~G 1273 (1303)
++.+|++|||||||++||+.+.+.+.+.|++...+++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 143 l~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 143 VIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999999987555689999999999875 59999999999998865
No 325
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-40 Score=368.17 Aligned_cols=219 Identities=24% Similarity=0.428 Sum_probs=185.9
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc--C---CccEEEECCeeCCCC--C
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD--P---VAGQVLLDGRDLKLY--N 1124 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~--~---~~G~I~idG~di~~~--~ 1124 (1303)
|.|+++|++++|++. ++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|++||.++... +
T Consensus 3 ~~l~~~nl~~~~~~~---~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 3 NKVKLEQLNVHFGKN---HAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred cEEEEEEEEEEeCCe---eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 579999999999742 59999999999999999999999999999999999986 4 689999999998753 4
Q ss_pred HHHhhcceEEEccCCccCc-ccHHHHHHcCCC--C-CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChH
Q 000751 1125 LRWLRNHLGLVQQEPIIFS-TTIRENIIYARH--N-AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPG 1196 (1303)
Q Consensus 1125 ~~~lR~~i~~VpQdp~LF~-gTIreNl~~g~~--~-~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1196 (1303)
...+|++++||||++.+|+ .|++||+.++.. . .+ ++++.++++.+++.+.+.. .......+||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKD-------RLKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcCcCCHH
Confidence 5578899999999999998 599999986421 1 11 2345566666666543321 223345689999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecCh
Q 000751 1197 QKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTH 1275 (1303)
Q Consensus 1197 QrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~ 1275 (1303)
||||++||||++++|++|||||||++||+.+.+.+.+.|++... ++|+|++||+++.+. .||+|++|++|+|++.|++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGET 231 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999998865 589999999999874 6999999999999999999
Q ss_pred HHHhhc
Q 000751 1276 DSLLAK 1281 (1303)
Q Consensus 1276 ~eLl~~ 1281 (1303)
+++...
T Consensus 232 ~~~~~~ 237 (252)
T PRK14256 232 KKIFTT 237 (252)
T ss_pred HHHHhC
Confidence 999865
No 326
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=4.7e-40 Score=363.73 Aligned_cols=209 Identities=26% Similarity=0.397 Sum_probs=179.7
Q ss_pred cEEEEeeEEECCCCCC-cceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHH---h
Q 000751 1053 SIELKNVDFCYPSRPE-VLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRW---L 1128 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~---l 1128 (1303)
.|+++||+++|++... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999975321 25999999999999999999999999999999999999999999999999998887653 3
Q ss_pred -hcceEEEccCCccCcc-cHHHHHHcCCC--CC----CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHH
Q 000751 1129 -RNHLGLVQQEPIIFST-TIRENIIYARH--NA----SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQR 1200 (1303)
Q Consensus 1129 -R~~i~~VpQdp~LF~g-TIreNl~~g~~--~~----~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1200 (1303)
+++++|+||+|.+|+. |++||+.++.. .. ..+++.++++..++.+++...| ..||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP-----------AQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHHHH
Confidence 3679999999999875 99999976321 11 1345677777777766655443 3799999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhhcCEEEEEeCCEEEEe
Q 000751 1201 IAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRHVDNIVVLNGGRIVEE 1272 (1303)
Q Consensus 1201 laLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~ 1272 (1303)
++|||||+++|++|||||||++||+.+...+.+.|++..++ ++|+|+|||+++.+..||+|++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 99999999999999999999999999999999999887443 6899999999999889999999999999874
No 327
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-40 Score=367.53 Aligned_cols=214 Identities=30% Similarity=0.478 Sum_probs=180.9
Q ss_pred EEEEEEEEEcCCCC-CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHH---HHh
Q 000751 309 IEFRNVYFSYLSRP-EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLE---WLR 384 (1303)
Q Consensus 309 i~~~~v~f~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~~ 384 (1303)
|+++|++++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68999999996321 12799999999999999999999999999999999999999999999999999876543 347
Q ss_pred cceEEEeccccccc-HhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHH
Q 000751 385 SQIGLVTQEPALLS-LSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLS 456 (1303)
Q Consensus 385 ~~i~~v~Q~~~l~~-~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqria 456 (1303)
+.|+|++|++.+|. .|++||+.++. ..+. +++.++++..++ +........+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGL-----------EDKADAYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCC-----------hhhhhcChhhCCHHHHHHHH
Confidence 88999999999996 69999998752 1222 233444444444 33344455689999999999
Q ss_pred HHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHhh
Q 000751 457 IARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 457 lARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
||||++++|++|||||||++||+.+...+.+.|+++. .++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999999999998875 38999999999999864 99999999999999999888754
No 328
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=3.3e-40 Score=366.64 Aligned_cols=215 Identities=29% Similarity=0.461 Sum_probs=183.2
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... ++.++
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYG---ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 68999999995 346999999999999999999999999999999999999999999999999998766544 45899
Q ss_pred EEeccccc-ccHhHHHHHhcCC---CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccC
Q 000751 389 LVTQEPAL-LSLSIRDNIAYGR---DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLN 464 (1303)
Q Consensus 389 ~v~Q~~~l-~~~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~ 464 (1303)
|++|++.+ +..|++||+.++. ....++..+ .+.+.++.+ |++.........||||||||++||||++++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARE-----RIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999987 4689999998753 222222211 122334433 555556667779999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhc
Q 000751 465 PSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 465 ~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
|+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999998875 48999999999999888999999999999999999888764
No 329
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-40 Score=388.41 Aligned_cols=211 Identities=26% Similarity=0.432 Sum_probs=182.7
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.|+++|++++|+ +..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.+.+.. ++.|
T Consensus 3 ~l~i~~l~~~~~---~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYG---DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 489999999995 34699999999999999999999999999999999999999999999999999876653 5689
Q ss_pred EEEeccccccc-HhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHH
Q 000751 388 GLVTQEPALLS-LSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIAR 459 (1303)
Q Consensus 388 ~~v~Q~~~l~~-~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialAR 459 (1303)
+||+|++.+|. .|++|||.|+. ..+. +++.++++..++.++. .....+||||||||++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-----------~~~~~~LSgGq~QRvaLAr 146 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLL-----------DRKPKALSGGQRQRVAIGR 146 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhh-----------cCChhhCCHHHHHHHHHHH
Confidence 99999999995 69999999874 2222 3455555655554443 3344589999999999999
Q ss_pred hhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhc
Q 000751 460 AVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 460 al~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
||+.+|++||||||||+||+.+.+.+.+.|+++.+ +.|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 147 aL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 147 TLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999999988743 899999999999875 5999999999999999999998764
No 330
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.5e-40 Score=365.26 Aligned_cols=203 Identities=30% Similarity=0.438 Sum_probs=171.4
Q ss_pred EEEEEEEEEcCCCC-CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHH----HH
Q 000751 309 IEFRNVYFSYLSRP-EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLE----WL 383 (1303)
Q Consensus 309 i~~~~v~f~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~----~~ 383 (1303)
|+++||+++|++.. .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999995311 14799999999999999999999999999999999999999999999999999877643 24
Q ss_pred hcceEEEecccccccH-hHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHH
Q 000751 384 RSQIGLVTQEPALLSL-SIRDNIAYGRD---AT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKL 455 (1303)
Q Consensus 384 ~~~i~~v~Q~~~l~~~-ti~~ni~~~~~---~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqri 455 (1303)
+++++||+|++.+|.. |++||+.++.. .. ++++.++++..+ ++........+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVG-----------LGDRLNHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcC-----------CchhhhcChhhcCHHHHHHH
Confidence 5789999999999875 99999998631 12 123344444444 34344455568999999999
Q ss_pred HHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccccCEEEEEeCceE
Q 000751 456 SIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRNADYIAVMDEGRL 522 (1303)
Q Consensus 456 alARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~~d~i~~l~~G~i 522 (1303)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999988754 8999999999998888999999999974
No 331
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-40 Score=362.42 Aligned_cols=211 Identities=29% Similarity=0.490 Sum_probs=185.2
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++||+++|++. ..|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .+++++
T Consensus 2 l~~~~l~~~~~~~-----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHHL-----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVS 74 (232)
T ss_pred eEEEEEEEEECCc-----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEE
Confidence 7899999999632 239999999999999999999999999999999999999999999999887654 357899
Q ss_pred EEccCCccCcc-cHHHHHHcCC-CC-----CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1134 LVQQEPIIFST-TIRENIIYAR-HN-----ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1134 ~VpQdp~LF~g-TIreNl~~g~-~~-----~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
|+||+|.+|++ |++||+.++. +. ..++++.++++..++.+.+.+.|. .||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----------~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLPG-----------QLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCcc-----------cCCHHHHHHHHHHHH
Confidence 99999999985 9999998653 11 124567888888888877766653 799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
++++|++|||||||++||+.+.+.+.+.|++..++ ++|+|++||+++.+. .||+|++|++|++++.|+++++....
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~~ 221 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSGK 221 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCh
Confidence 99999999999999999999999999999987542 689999999999875 59999999999999999999998654
No 332
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-40 Score=372.56 Aligned_cols=218 Identities=28% Similarity=0.457 Sum_probs=187.4
Q ss_pred ccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecCC--CC
Q 000751 307 GNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIKN--LK 379 (1303)
Q Consensus 307 ~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~ 379 (1303)
+.|+++||+++|+ +.++|+|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|.++.. .+
T Consensus 18 ~~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~ 94 (267)
T PRK14235 18 IKMRARDVSVFYG---EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLD 94 (267)
T ss_pred ceEEEEeEEEEEC---CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccc
Confidence 4699999999995 34699999999999999999999999999999999999975 89999999999864 34
Q ss_pred HHHHhcceEEEecccccccHhHHHHHhcCC---CC--C----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChH
Q 000751 380 LEWLRSQIGLVTQEPALLSLSIRDNIAYGR---DA--T----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEE 450 (1303)
Q Consensus 380 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~--~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgG 450 (1303)
...+|+.|+||+|++.+|..|+.||+.++. .. . .+++.++++..++.+++. +.....+.+||||
T Consensus 95 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG 167 (267)
T PRK14235 95 VVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLSGG 167 (267)
T ss_pred hHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCHH
Confidence 567888999999999999889999998753 11 1 233455666666544332 2334567789999
Q ss_pred HHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChH
Q 000751 451 QKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHD 529 (1303)
Q Consensus 451 qkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~ 529 (1303)
||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++
T Consensus 168 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 247 (267)
T PRK14235 168 QQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTE 247 (267)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999998877899999999999985 59999999999999999999
Q ss_pred HHhhc
Q 000751 530 ELLAT 534 (1303)
Q Consensus 530 ~l~~~ 534 (1303)
++...
T Consensus 248 ~~~~~ 252 (267)
T PRK14235 248 KMFTN 252 (267)
T ss_pred HHHhC
Confidence 88643
No 333
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-40 Score=359.23 Aligned_cols=202 Identities=28% Similarity=0.498 Sum_probs=176.3
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++|++++|++. . .|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 5799999999642 1 39999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEccCCccCcc-cHHHHHHcCCC-C-----CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1134 LVQQEPIIFST-TIRENIIYARH-N-----ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1134 ~VpQdp~LF~g-TIreNl~~g~~-~-----~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
|++|+|.+|++ |++||+.++.. . .+++++.++++.+++.+...+.| .+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999975 99999987532 1 12446788888888877666554 3799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhh-cCEEEEEeCCEEEEec
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~G 1273 (1303)
++++|++|||||||++||+++...+.+.|++..++ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999987532 6899999999998855 9999999999998865
No 334
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-40 Score=366.42 Aligned_cols=219 Identities=22% Similarity=0.406 Sum_probs=183.7
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHH-hhcc
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRW-LRNH 1131 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~-lR~~ 1131 (1303)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|++
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 3889999999964 25999999999999999999999999999999999999999999999999998877644 5788
Q ss_pred eEEEccCCccCcc-cHHHHHHcCCC---CCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHH
Q 000751 1132 LGLVQQEPIIFST-TIRENIIYARH---NASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVV 1207 (1303)
Q Consensus 1132 i~~VpQdp~LF~g-TIreNl~~g~~---~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAl 1207 (1303)
++|+||++.+|++ |++||+.++.. ..+.++.+ ..+.+.++.+ |++.........||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRE-----DRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHH-----HHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 9999999999974 99999987531 11222111 1123344443 444444555668999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1208 LKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1208 lr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
+++|++|||||||++||+.+...+.+.+++....++|+|++||+++.+ ..||+|++|++|++++.|++++++..
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 999999999999999999999999999988755568999999999765 56999999999999999999998754
No 335
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-40 Score=371.49 Aligned_cols=215 Identities=30% Similarity=0.489 Sum_probs=185.9
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.++++|++++|++ +++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.|
T Consensus 7 ~l~~~nl~~~~~~-~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPN-SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCC-CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 5899999999963 245799999999999999999999999999999999999999999999999999887777889999
Q ss_pred EEEeccc--ccccHhHHHHHhcCC---CCCHHH----HHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHH
Q 000751 388 GLVTQEP--ALLSLSIRDNIAYGR---DATLDQ----IEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIA 458 (1303)
Q Consensus 388 ~~v~Q~~--~l~~~ti~~ni~~~~---~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialA 458 (1303)
+||+|+| .++..|++||+.++. ..+.++ +.++++..++.+++ .....+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYL-----------DKEPQNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCCcccCCHHHHHHHHHH
Confidence 9999998 455789999999863 233332 34445555554443 344568999999999999
Q ss_pred HhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhc
Q 000751 459 RAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 459 Ral~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
|||+++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+.+++.+.
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999988753 4899999999998888999999999999999998887654
No 336
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-40 Score=366.31 Aligned_cols=209 Identities=25% Similarity=0.399 Sum_probs=177.4
Q ss_pred cEEEEEEEEEcCCCC-CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHH---H
Q 000751 308 NIEFRNVYFSYLSRP-EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW---L 383 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~ 383 (1303)
-++++||+|+|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 389999999996322 146999999999999999999999999999999999999999999999999998877643 3
Q ss_pred h-cceEEEeccccccc-HhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHH
Q 000751 384 R-SQIGLVTQEPALLS-LSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIK 454 (1303)
Q Consensus 384 ~-~~i~~v~Q~~~l~~-~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqr 454 (1303)
+ +.|+|++|++.+|. .|++||+.++. .... +++.++++.. |++........+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAV-----------GLEHRANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCchhhhCChhhCCHHHHHH
Confidence 3 67999999999886 59999998742 2222 2334444444 34444455567899999999
Q ss_pred HHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccccCEEEEEeCceEeeccC
Q 000751 455 LSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGT 527 (1303)
Q Consensus 455 ialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~ 527 (1303)
++||||++.+|+||||||||++||+.+...+.+.|+++. +|+|+|++||+++.+..+|++++|++|+|++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999998874 4899999999999998889999999999998775
No 337
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=4.5e-40 Score=361.14 Aligned_cols=210 Identities=25% Similarity=0.424 Sum_probs=187.8
Q ss_pred EEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCH----HHHhc
Q 000751 310 EFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKL----EWLRS 385 (1303)
Q Consensus 310 ~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~----~~~~~ 385 (1303)
.+.|++|+|+. +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~--~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGS--GLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCC--CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 56899999963 3579999999999999999999999999999999999999999999999998876542 33567
Q ss_pred ceEEEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCC
Q 000751 386 QIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNP 465 (1303)
Q Consensus 386 ~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~ 465 (1303)
.++|++|++.+|+.|++||+.++...++++..++++.+++.+++..+|.|++|.++....+||||||||++||||++.+|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 89999999999999999999987655666778888889998889999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHH--HHHHhc-CCCeEEEEecCCccccccCEEEEEeCce
Q 000751 466 SILLLDEVTGGLDFEAERAVQE--ALDLLM-LGRSTIIIARRLSLIRNADYIAVMDEGR 521 (1303)
Q Consensus 466 ~ililDe~ts~lD~~~~~~i~~--~l~~~~-~~~t~i~ith~~~~~~~~d~i~~l~~G~ 521 (1303)
++|||||||++||+.+...+.+ .++.+. .++|+|++||+++.+..||++++|++|+
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 9999999999999999888877 454443 4789999999999998899999999884
No 338
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-40 Score=365.44 Aligned_cols=212 Identities=30% Similarity=0.482 Sum_probs=185.1
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++|++++|++. ++|+|+||+|+|||+++|+|+||||||||+++|.|+++|.+|+|++||.++.+.+. .++.++
T Consensus 1 l~~~~l~~~~~~~---~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGGF---VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCCe---eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 5799999999743 59999999999999999999999999999999999999999999999999987664 367899
Q ss_pred EEccCCccCcc-cHHHHHHcCCC--CC----CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1134 LVQQEPIIFST-TIRENIIYARH--NA----SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1134 ~VpQdp~LF~g-TIreNl~~g~~--~~----~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
||||+|.+|.+ |++||+.++.. .. .++++.++++..++.+++...| ..||||||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~lara 144 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARA 144 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999975 99999986421 11 1345667777777766665544 4899999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
++++|+++||||||++||+.+.+.+.+.|++..++ ++|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 145 l~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 145 LVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 99999999999999999999999999999987542 689999999999875 5999999999999999999998764
No 339
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=3.5e-40 Score=349.63 Aligned_cols=178 Identities=35% Similarity=0.650 Sum_probs=165.5
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++|++++|++.. .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~~~-~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQE-QQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCCC-ccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 57999999997542 2599999999999999999999999999999999999999999999999998776 667889999
Q ss_pred EEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000751 1134 LVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPI 1213 (1303)
Q Consensus 1134 ~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~I 1213 (1303)
|+||+|.+|+.|++||+ ..+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 347999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEEEEec
Q 000751 1214 LLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1214 LlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~Ive~G 1273 (1303)
|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLK-DKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcC-CCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999998754 69999999999999999999999999999865
No 340
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-40 Score=370.44 Aligned_cols=213 Identities=30% Similarity=0.500 Sum_probs=182.3
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
++++||+|+|++ ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGG--GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCC--cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 468999999953 156999999999999999999999999999999999999999999999999998888778888999
Q ss_pred EEeccccccc-HhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCc--cccCCCCCCChHHHHHHHHH
Q 000751 389 LVTQEPALLS-LSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYET--QVGRAGLALTEEQKIKLSIA 458 (1303)
Q Consensus 389 ~v~Q~~~l~~-~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t--~vg~~g~~LSgGqkqrialA 458 (1303)
||+|++.+|. .|++||+.++. ..+. +++.++++.. |+.. .....+.+||||||||++||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l-----------~l~~~~~~~~~~~~LS~G~~qrv~la 147 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALV-----------GLDPAEFADRYPHELSGGQQQRVGVA 147 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-----------CCCcHHHHhcChhhCCHHHHHHHHHH
Confidence 9999999885 79999998753 1221 2233333333 3332 34556678999999999999
Q ss_pred HhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhc
Q 000751 459 RAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 459 Ral~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
||++++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 148 ral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 148 RALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999999999999988753 899999999999765 5999999999999999999888653
No 341
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-40 Score=371.96 Aligned_cols=213 Identities=27% Similarity=0.466 Sum_probs=183.2
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCC-HHHHhcce
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLK-LEWLRSQI 387 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-~~~~~~~i 387 (1303)
++++|++|+|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.|
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 689999999952 346999999999999999999999999999999999999999999999999998765 45678899
Q ss_pred EEEecccc--cccHhHHHHHhcCC---CCCHH----HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHH
Q 000751 388 GLVTQEPA--LLSLSIRDNIAYGR---DATLD----QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIA 458 (1303)
Q Consensus 388 ~~v~Q~~~--l~~~ti~~ni~~~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialA 458 (1303)
+||+|+|. +++.|++|||.++. ..+.+ ++.++++..++.++ .......||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKY-----------RHRSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHH-----------hcCCcccCCHHHHHHHHHH
Confidence 99999985 56789999999864 12322 33444444444333 3444568999999999999
Q ss_pred HhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhc
Q 000751 459 RAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 459 Ral~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
|||+.+|+||||||||++||+.+...+.+.++++. +|+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998875 58999999999999988999999999999999999887653
No 342
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=6.5e-40 Score=378.50 Aligned_cols=228 Identities=20% Similarity=0.366 Sum_probs=186.1
Q ss_pred cEEEEeeEEECCCC-CCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCC---ccEEEECCeeCCCCCHHHh
Q 000751 1053 SIELKNVDFCYPSR-PEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPV---AGQVLLDGRDLKLYNLRWL 1128 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~-~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~---~G~I~idG~di~~~~~~~l 1128 (1303)
.++++|++++|+.. ...++|+||||+|++||++||||+||||||||+++|+|+++|. +|+|.+||.|+..++.+.+
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 58999999999642 2246999999999999999999999999999999999999996 9999999999999987765
Q ss_pred h----cceEEEccCC--ccCc-ccHHHHHHcCC---CCCCHHH----HHHHHHHhchHHHHHhCCCCcccccCCCCCCCC
Q 000751 1129 R----NHLGLVQQEP--IIFS-TTIRENIIYAR---HNASEAE----VKEAARIANAHHFISSLPHGYDTHVGMRGVDLT 1194 (1303)
Q Consensus 1129 R----~~i~~VpQdp--~LF~-gTIreNl~~g~---~~~~~~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1194 (1303)
| ++|+||||+| .+++ .|+.+|+.... ...+.++ +.+.++.+++ |++. ..++....+||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL-------~~~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKM-------PEAR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-------CChH-HHhcCCcccCC
Confidence 3 4799999999 4554 47877774211 1123322 3344444433 3332 22456677999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEe
Q 000751 1195 PGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEE 1272 (1303)
Q Consensus 1195 gGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~ 1272 (1303)
||||||++|||||+.+|++||+|||||+||..+...|.+.|+++.++ +.|+|+|||+++.+. .||+|+||.+|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999987543 689999999999886 5999999999999999
Q ss_pred cChHHHhhc-CchhHHH
Q 000751 1273 GTHDSLLAK-NGLYVRL 1288 (1303)
Q Consensus 1273 Gt~~eLl~~-~g~y~~l 1288 (1303)
|+++++.+. ...|.+.
T Consensus 244 g~~~~i~~~p~~pyt~~ 260 (330)
T PRK09473 244 GNARDVFYQPSHPYSIG 260 (330)
T ss_pred CCHHHHHhCCCCHHHHH
Confidence 999999976 3345553
No 343
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=370.71 Aligned_cols=219 Identities=26% Similarity=0.486 Sum_probs=186.0
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEECCeeCCC--CC
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD-----PVAGQVLLDGRDLKL--YN 1124 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~~ 1124 (1303)
..|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++.+ .+
T Consensus 38 ~~l~i~~l~~~~~~~---~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGDE---QALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECCE---eeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 358999999999642 59999999999999999999999999999999999997 689999999999865 35
Q ss_pred HHHhhcceEEEccCCccCcccHHHHHHcCCC-----CCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHH
Q 000751 1125 LRWLRNHLGLVQQEPIIFSTTIRENIIYARH-----NASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQ 1199 (1303)
Q Consensus 1125 ~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~-----~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1199 (1303)
...+|++++||||++.+|+.|++||+.++.. ...+++++++++..++.+.+.. .......+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKD-------QLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHH-------HHhCCcccCCHHHHH
Confidence 5678899999999999999999999986421 1123456667777666433321 223445689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEE-EEeCCEEEEecChHH
Q 000751 1200 RIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIV-VLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1200 RlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Ii-vl~~G~Ive~Gt~~e 1277 (1303)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+++ +|++|+|++.|++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~ 266 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDK 266 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHH
Confidence 99999999999999999999999999999999999998865 4899999999998765 99975 579999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+.++
T Consensus 267 ~~~~ 270 (285)
T PRK14254 267 IFEN 270 (285)
T ss_pred HHhC
Confidence 9765
No 344
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-40 Score=377.21 Aligned_cols=228 Identities=21% Similarity=0.328 Sum_probs=184.8
Q ss_pred cEEEEeeEEECCCCCC-cceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc----CCccEEEECCeeCCCCCHHH
Q 000751 1053 SIELKNVDFCYPSRPE-VLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD----PVAGQVLLDGRDLKLYNLRW 1127 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~----~~~G~I~idG~di~~~~~~~ 1127 (1303)
-|+++|++++|+.... ..+|+||||+|++||.+||||+||||||||+++|+|+++ |++|+|.+||.|+.+++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 3799999999975321 359999999999999999999999999999999999998 48999999999999998776
Q ss_pred hhc----ceEEEccCCc--cCc-ccHHHHH----HcCCCC---CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCC
Q 000751 1128 LRN----HLGLVQQEPI--IFS-TTIRENI----IYARHN---ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDL 1193 (1303)
Q Consensus 1128 lR~----~i~~VpQdp~--LF~-gTIreNl----~~g~~~---~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1193 (1303)
+|+ +|+||||+|. +++ -|+.+|+ ...... ...+++.++++.+++.+.. ........+|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~--------~~l~~~p~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPA--------SRLDVYPHQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhCCchhC
Confidence 543 6999999995 443 3665554 322111 1134466777777764321 1123445689
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhH-hhcCEEEEEeCCEEEE
Q 000751 1194 TPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMM-RHVDNIVVLNGGRIVE 1271 (1303)
Q Consensus 1194 SgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive 1271 (1303)
|||||||++|||||+.+|++||+|||||+||+.+...+.+.|+++.+ .+.|+|+|||+++.+ ..||+|+||++|+|+|
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive 234 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE 234 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998754 368999999999988 4699999999999999
Q ss_pred ecChHHHhhc-CchhHHH
Q 000751 1272 EGTHDSLLAK-NGLYVRL 1288 (1303)
Q Consensus 1272 ~Gt~~eLl~~-~g~y~~l 1288 (1303)
.|++++++++ ...|.+.
T Consensus 235 ~g~~~~~~~~p~hpyt~~ 252 (326)
T PRK11022 235 TGKAHDIFRAPRHPYTQA 252 (326)
T ss_pred ECCHHHHhhCCCChHHHH
Confidence 9999999976 3345443
No 345
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=4.2e-40 Score=347.11 Aligned_cols=173 Identities=40% Similarity=0.673 Sum_probs=163.1
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++|++++|++.. .++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++.+++.+.+|++++
T Consensus 1 i~~~~l~~~~~~~~-~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGAE-PPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCCC-CcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 57999999997532 35999999999999999999999999999999999999999999999999999999889999999
Q ss_pred EEccCCccCcccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000751 1134 LVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPI 1213 (1303)
Q Consensus 1134 ~VpQdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~I 1213 (1303)
|++|+|.+|++|++||+ ||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhhcCEEEEEeCCEE
Q 000751 1214 LLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRI 1269 (1303)
Q Consensus 1214 LlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~~D~Iivl~~G~I 1269 (1303)
|||||||++||+.+.+.+.+.|++..++++|+|++||+++.+..||+|++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999999875556899999999999999999999999974
No 346
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-40 Score=367.45 Aligned_cols=219 Identities=23% Similarity=0.415 Sum_probs=186.7
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-----CccEEEECCeeCCCC--CH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-----VAGQVLLDGRDLKLY--NL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~~--~~ 1125 (1303)
.|+++||+++|+++ ++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 6 ~i~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGEK---HALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECCe---eeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 48999999999643 499999999999999999999999999999999999763 489999999999876 45
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCCC--C-C----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARHN--A-S----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~--~-~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
...|+.++|+||+|.+|+.|++||+.++... . . ++.+.++++.+++.+.+ .+.......+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEV-------KDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhh-------HHHhhcChhhCCHHHH
Confidence 6778899999999999999999999875321 1 1 22345555555553322 2334556678999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++||||++.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 234 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQ 234 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHH
Confidence 999999999999999999999999999999999999998765 589999999999885 599999999999999999999
Q ss_pred HhhcC
Q 000751 1278 LLAKN 1282 (1303)
Q Consensus 1278 Ll~~~ 1282 (1303)
+.++.
T Consensus 235 ~~~~~ 239 (253)
T PRK14261 235 IFENP 239 (253)
T ss_pred HHhCC
Confidence 97653
No 347
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-40 Score=361.41 Aligned_cols=202 Identities=24% Similarity=0.391 Sum_probs=175.4
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
|+++|++|+|+ +.++|+|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.++.+.+ ..+++.++
T Consensus 1 i~~~~~~~~~~---~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYG---KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEEC---CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 57899999995 346999999999999 99999999999999999999999999999999999988766 67788999
Q ss_pred EEecccccccH-hHHHHHhcCC---CCC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHh
Q 000751 389 LVTQEPALLSL-SIRDNIAYGR---DAT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARA 460 (1303)
Q Consensus 389 ~v~Q~~~l~~~-ti~~ni~~~~---~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARa 460 (1303)
||+|++.+|.. |++||+.+.. ..+ ++++.++++..++.++.+ .....||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-----------KKIGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-----------CchhhCCHHHHHHHHHHHH
Confidence 99999999875 9999998742 122 234555666666654432 2335799999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeecc
Q 000751 461 VLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMG 526 (1303)
Q Consensus 461 l~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g 526 (1303)
++++|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998877899999999999986 59999999999998765
No 348
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-40 Score=370.24 Aligned_cols=218 Identities=24% Similarity=0.425 Sum_probs=184.3
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEECCeeCCC--CCH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD-----PVAGQVLLDGRDLKL--YNL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~~~ 1125 (1303)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 24 ~l~~~~l~~~~~~~---~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGED---HALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECCc---ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 59999999999743 49999999999999999999999999999999999987 699999999999853 455
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCC--CCCH-----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARH--NASE-----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~~~-----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
..+|++++|+||+|.+|..|++||+.++.. ..++ +.+.++++..++.+ ++.......+..||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWD-------ELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-------hHHHHHhcCcccCCHHHH
Confidence 678899999999999999999999986421 1221 12334444443322 222333455668999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~ 252 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDK 252 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999998765 599999999999875 599999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+...
T Consensus 253 ~~~~ 256 (271)
T PRK14238 253 IFSN 256 (271)
T ss_pred HHcC
Confidence 9765
No 349
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=3.2e-40 Score=361.34 Aligned_cols=202 Identities=31% Similarity=0.475 Sum_probs=171.8
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCC--CCHHHhhcc
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKL--YNLRWLRNH 1131 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~--~~~~~lR~~ 1131 (1303)
|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|++
T Consensus 1 l~~~~l~~~~~~~---~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGDF---HVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECCe---EeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 5789999999743 59999999999999999999999999999999999999999999999999853 455678899
Q ss_pred eEEEccCCccCc-ccHHHHHHcCCC---CCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHH
Q 000751 1132 LGLVQQEPIIFS-TTIRENIIYARH---NASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAI 1203 (1303)
Q Consensus 1132 i~~VpQdp~LF~-gTIreNl~~g~~---~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaL 1203 (1303)
++|+||+|.+|+ .|++||+.++.. ..+. +++.++++..++.+.+.+ ...+||||||||++|
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~l 146 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADA-----------YPAQLSGGQQQRVAI 146 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhh-----------CccccCHHHHHHHHH
Confidence 999999999987 699999987531 1222 234445555555443333 335899999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEE
Q 000751 1204 ARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRI 1269 (1303)
Q Consensus 1204 ARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~I 1269 (1303)
|||++++|++|||||||++||+.+.+.+.+.|++..+.++|+|++||+++.+. .||+|++|++|+|
T Consensus 147 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 147 ARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999987555689999999999886 5999999999975
No 350
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5.2e-40 Score=361.86 Aligned_cols=211 Identities=23% Similarity=0.424 Sum_probs=180.9
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+++|++. ++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~i~~~~l~~~~~~~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGDA---KILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCCc---eeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 58999999999643 499999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEccCCccCcccHHHHHHcCC---CC-CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHh
Q 000751 1133 GLVQQEPIIFSTTIRENIIYAR---HN-ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVL 1208 (1303)
Q Consensus 1133 ~~VpQdp~LF~gTIreNl~~g~---~~-~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAll 1208 (1303)
+|++|+|.+|+.|++||+.++. .. ..++++.++++..++.+ +.......+||||||||++|||||+
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~laral~ 153 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQRISLIRNLQ 153 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHHHHHHHHHh
Confidence 9999999999999999998632 11 12233444555544421 2234455689999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHhhcCEEEEEe-CCEEEEecChH
Q 000751 1209 KNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMRHVDNIVVLN-GGRIVEEGTHD 1276 (1303)
Q Consensus 1209 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~~~D~Iivl~-~G~Ive~Gt~~ 1276 (1303)
++|++|||||||++||+.+.+.+.+.|++..++ ++|+|+|||+++.+..||+|++|+ ++..+++|+|+
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 154 FMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999999999987542 689999999999999999999995 66678889885
No 351
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-40 Score=368.29 Aligned_cols=218 Identities=28% Similarity=0.428 Sum_probs=187.5
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEECCeeCCC--CCH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD-----PVAGQVLLDGRDLKL--YNL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~~~ 1125 (1303)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 10 ~l~i~~v~~~~~~~---~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGSF---LAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECCE---EEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 48999999999643 59999999999999999999999999999999999986 379999999999853 456
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCCC--C---CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARHN--A---SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQR 1200 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~--~---~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1200 (1303)
..+|++++||+|+|.+|+.|++||+.++... . .++++.++++.+++.+++.. .......+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHHH
Confidence 6788999999999999999999999875321 1 13445666777777655532 2234566899999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhH-hhcCEEEEEe---------CCEEE
Q 000751 1201 IAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMM-RHVDNIVVLN---------GGRIV 1270 (1303)
Q Consensus 1201 laLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti-~~~D~Iivl~---------~G~Iv 1270 (1303)
++||||++++|+||||||||++||+.+...+.+.|++..+ ++|+|++||+++.+ ..||+|++|+ +|+|+
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~ 238 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLV 238 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 9999999999999999999999999999999999998765 48999999999876 5689999998 89999
Q ss_pred EecChHHHhhc
Q 000751 1271 EEGTHDSLLAK 1281 (1303)
Q Consensus 1271 e~Gt~~eLl~~ 1281 (1303)
+.|+++++.+.
T Consensus 239 ~~~~~~~~~~~ 249 (264)
T PRK14243 239 EFDRTEKIFNS 249 (264)
T ss_pred EeCCHHHHHhC
Confidence 99999999865
No 352
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-40 Score=371.46 Aligned_cols=213 Identities=30% Similarity=0.517 Sum_probs=185.8
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
++++|++++|++ ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++.++
T Consensus 4 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 4 IETRDLCYSYSG--SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred EEEEEEEEEeCC--CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 789999999952 246999999999999999999999999999999999999999999999999998777778889999
Q ss_pred EEeccc--ccccHhHHHHHhcCC---CCCHH----HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHH
Q 000751 389 LVTQEP--ALLSLSIRDNIAYGR---DATLD----QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIAR 459 (1303)
Q Consensus 389 ~v~Q~~--~l~~~ti~~ni~~~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialAR 459 (1303)
||+|++ .+|+.|++||+.++. ..+.+ ++.++++..++.+++.+ ....||||||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDR-----------VPHHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcC-----------CcccCCHHHHHHHHHHH
Confidence 999998 477889999998753 23332 34556666666544433 34589999999999999
Q ss_pred hhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhc
Q 000751 460 AVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 460 al~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
||+.+|++|||||||++||+.+.+.+.+.++++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999999988753 799999999999985 6999999999999999999998764
No 353
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-40 Score=375.08 Aligned_cols=211 Identities=28% Similarity=0.438 Sum_probs=180.3
Q ss_pred EEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHH----hc
Q 000751 310 EFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWL----RS 385 (1303)
Q Consensus 310 ~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----~~ 385 (1303)
.++|++++|. +.++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+ ++
T Consensus 26 ~~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 4567888883 4569999999999999999999999999999999999999999999999999987765543 46
Q ss_pred ceEEEecccccc-cHhHHHHHhcCC---CCC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHH
Q 000751 386 QIGLVTQEPALL-SLSIRDNIAYGR---DAT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSI 457 (1303)
Q Consensus 386 ~i~~v~Q~~~l~-~~ti~~ni~~~~---~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrial 457 (1303)
+|+|++|++.+| +.|++||+.++. ... ++++.++++..++.+++...| .+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHH
Confidence 799999999988 479999998752 112 234556666666655544433 4799999999999
Q ss_pred HHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhc
Q 000751 458 ARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 458 ARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
||||+++|+||||||||++||+.+.+.+.+.|.++. .|+|+|++||+++.+. .||++++|++|++++.|+++++...
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999998874 3799999999999875 5999999999999999999998754
No 354
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-40 Score=372.92 Aligned_cols=216 Identities=28% Similarity=0.431 Sum_probs=187.0
Q ss_pred cEEEEEEEEEcCCCC---CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCC-HHHH
Q 000751 308 NIEFRNVYFSYLSRP---EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLK-LEWL 383 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~---~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-~~~~ 383 (1303)
-++++|++|+|++.. ++++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++|.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999996421 346999999999999999999999999999999999999999999999999987653 3557
Q ss_pred hcceEEEecccc--cccHhHHHHHhcCC---CCC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHH
Q 000751 384 RSQIGLVTQEPA--LLSLSIRDNIAYGR---DAT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIK 454 (1303)
Q Consensus 384 ~~~i~~v~Q~~~--l~~~ti~~ni~~~~---~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqr 454 (1303)
++.|+||+|+|. ++..|+.||+.|+. ..+ ++++.++++.+++.++..+. ...||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHA-----------PHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHH
Confidence 889999999984 67779999999863 122 23456666666666555443 35899999999
Q ss_pred HHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccccCEEEEEeCceEeeccChHHHh
Q 000751 455 LSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELL 532 (1303)
Q Consensus 455 ialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~ 532 (1303)
++|||||+.+|++|||||||++||+.+...+.+.|+++. .++|+|++||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999998874 389999999999998889999999999999999999987
Q ss_pred hc
Q 000751 533 AT 534 (1303)
Q Consensus 533 ~~ 534 (1303)
..
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 65
No 355
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-40 Score=368.35 Aligned_cols=217 Identities=28% Similarity=0.455 Sum_probs=186.3
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecCCCCHHH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIKNLKLEW 382 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~~~~ 382 (1303)
.++++|++++|+ +.++|+|+||+|++||+++|+||||||||||+++|.|+++| ++|+|.++|.++.+.+...
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFG---QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEEC---CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 489999999995 34699999999999999999999999999999999999974 6999999999998888888
Q ss_pred HhcceEEEecccccc-cHhHHHHHhcCCC-----CC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 383 LRSQIGLVTQEPALL-SLSIRDNIAYGRD-----AT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 383 ~~~~i~~v~Q~~~l~-~~ti~~ni~~~~~-----~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
+|+.|+||+|++.+| +.|++||+.++.. .. .+++.++++..++.+.+. ........+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK-------DRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCCcccCCHHHH
Confidence 899999999999755 6899999987531 11 234555566665543321 123344568999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999999999999999998877899999999999885 5999999999999999999998
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
.+.
T Consensus 233 ~~~ 235 (250)
T PRK14247 233 FTN 235 (250)
T ss_pred HcC
Confidence 654
No 356
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.1e-39 Score=361.27 Aligned_cols=213 Identities=30% Similarity=0.482 Sum_probs=173.6
Q ss_pred EEEEeeEEECCCCC-CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCH---HHhh
Q 000751 1054 IELKNVDFCYPSRP-EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNL---RWLR 1129 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~---~~lR 1129 (1303)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999997431 1259999999999999999999999999999999999999999999999999988774 5788
Q ss_pred cceEEEccCC--ccC-cccHHHHHHcCCC----CCCHHHHHHHHHHhchHHHHHhCCCCcc-cccCCCCCCCChHHHHHH
Q 000751 1130 NHLGLVQQEP--IIF-STTIRENIIYARH----NASEAEVKEAARIANAHHFISSLPHGYD-THVGMRGVDLTPGQKQRI 1201 (1303)
Q Consensus 1130 ~~i~~VpQdp--~LF-~gTIreNl~~g~~----~~~~~ei~~al~~a~l~~~I~~lp~Gld-t~vge~G~~LSgGQrQRl 1201 (1303)
++++|+||+| .++ ..|++||+.++.. ...++...++. .+.++.+ |+. ........+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAV-----LLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHH-----HHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 9999999999 344 4799999975421 11112111111 1222222 332 233445568999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEec
Q 000751 1202 AIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1202 aLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~G 1273 (1303)
+||||++.+|+||||||||++||+.+...+.+.|++..++ ++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 9999999999999999999999999999999999987553 689999999999887 69999999999998865
No 357
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.6e-40 Score=359.33 Aligned_cols=202 Identities=26% Similarity=0.398 Sum_probs=177.1
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
|+++|++++|+ +.++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++... ..+++.++
T Consensus 1 l~~~~l~~~~~---~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYG---KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEEC---CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 47899999995 35799999999999999999999999999999999999999999999999988654 45678899
Q ss_pred EEecccccc-cHhHHHHHhcCC---CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccC
Q 000751 389 LVTQEPALL-SLSIRDNIAYGR---DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLN 464 (1303)
Q Consensus 389 ~v~Q~~~l~-~~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~ 464 (1303)
||+|++.+| +.|++||+.++. ..+++++.++++..++.+...+ ....||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKK-----------KVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhh-----------hHhhCCHHHHHHHHHHHHHhcC
Confidence 999999887 579999998753 2345667777777777654433 3457999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeecc
Q 000751 465 PSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMG 526 (1303)
Q Consensus 465 ~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g 526 (1303)
|+++||||||++||+.+.+.+.+.+.++. +++|+|++||+++.+. .||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999998865 5899999999999886 49999999999998765
No 358
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-40 Score=369.49 Aligned_cols=217 Identities=27% Similarity=0.406 Sum_probs=184.9
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC--C---CCcEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD--P---TLGEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~--~~~ 380 (1303)
-|+++|++|+|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++.. .+.
T Consensus 12 ~l~i~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYG---QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEEC---CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 589999999995 3469999999999999999999999999999999999997 3 58999999999863 445
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCCC----CCHH----HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGRD----ATLD----QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~----~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
..+|+.|+||+|++.+|..|++||+.++.. ..++ ++.++++..++.+++. +.....+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHH
Confidence 677889999999999998999999987631 1222 2334444555443321 234556778999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++||||++++|++|||||||++||+++...+.+.|+++.+++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999999877899999999999876 5999999999999999999998
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
..+
T Consensus 242 ~~~ 244 (259)
T PRK14274 242 FSN 244 (259)
T ss_pred hhC
Confidence 654
No 359
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-40 Score=368.84 Aligned_cols=217 Identities=29% Similarity=0.415 Sum_probs=184.6
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecC--CCCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIK--NLKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~--~~~~ 380 (1303)
.|+++|++++|+ +.++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++. +.+.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYG---SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeC---CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 489999999995 34699999999999999999999999999999999999987 4999999999987 4556
Q ss_pred HHHhcceEEEeccccccc-HhHHHHHhcCC---CC--CH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChH
Q 000751 381 EWLRSQIGLVTQEPALLS-LSIRDNIAYGR---DA--TL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEE 450 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~-~ti~~ni~~~~---~~--~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgG 450 (1303)
..+|++|+||+|++.+|. .|+.||+.++. .. .. +++.++++..++.+++. ........+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVK-------DRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchh-------hhhccChhhCCHH
Confidence 677889999999999996 49999998752 11 22 23444555554433221 2234566789999
Q ss_pred HHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChH
Q 000751 451 QKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHD 529 (1303)
Q Consensus 451 qkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~ 529 (1303)
||||++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999998877899999999999876 59999999999999999999
Q ss_pred HHhhc
Q 000751 530 ELLAT 534 (1303)
Q Consensus 530 ~l~~~ 534 (1303)
++.+.
T Consensus 234 ~~~~~ 238 (253)
T PRK14267 234 KVFEN 238 (253)
T ss_pred HHHhC
Confidence 98754
No 360
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-40 Score=369.66 Aligned_cols=219 Identities=26% Similarity=0.404 Sum_probs=188.7
Q ss_pred CccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC-----CCCcEEEECCeecCC--C
Q 000751 306 HGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD-----PTLGEVLLDGENIKN--L 378 (1303)
Q Consensus 306 ~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~ 378 (1303)
...|+++|++|+|+ ++++|+|+||++++||+++|+||||||||||+++|.|+++ |++|+|.++|.++.. .
T Consensus 18 ~~~l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 94 (267)
T PRK14237 18 EIALSTKDLHVYYG---KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEI 94 (267)
T ss_pred CeEEEEeeEEEEEC---CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccC
Confidence 34699999999994 3579999999999999999999999999999999999997 589999999999864 3
Q ss_pred CHHHHhcceEEEecccccccHhHHHHHhcCC---CC-C----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChH
Q 000751 379 KLEWLRSQIGLVTQEPALLSLSIRDNIAYGR---DA-T----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEE 450 (1303)
Q Consensus 379 ~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgG 450 (1303)
+...+|+.|+||+|++.+|..|++||+.++. .. + ++++.++++..++.+++. +..+..+..||||
T Consensus 95 ~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G 167 (267)
T PRK14237 95 NVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALTLSGG 167 (267)
T ss_pred ChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcccCCHH
Confidence 4566788999999999999899999999863 11 1 234455566666654432 3455677899999
Q ss_pred HHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChH
Q 000751 451 QKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHD 529 (1303)
Q Consensus 451 qkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~ 529 (1303)
||||++||||++++|++|||||||++||+.+...+.+.|+++.++.|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 168 ~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 247 (267)
T PRK14237 168 QQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTR 247 (267)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999998877899999999999875 59999999999999999999
Q ss_pred HHhhc
Q 000751 530 ELLAT 534 (1303)
Q Consensus 530 ~l~~~ 534 (1303)
++...
T Consensus 248 ~~~~~ 252 (267)
T PRK14237 248 NIFTN 252 (267)
T ss_pred HHhcC
Confidence 98654
No 361
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-40 Score=369.17 Aligned_cols=218 Identities=26% Similarity=0.444 Sum_probs=186.0
Q ss_pred ccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC-----CCCcEEEECCeecCC--CC
Q 000751 307 GNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD-----PTLGEVLLDGENIKN--LK 379 (1303)
Q Consensus 307 ~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~ 379 (1303)
..|+++||+++|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 12 ~~l~i~nl~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYG---TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEEC---CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 3599999999995 3469999999999999999999999999999999999987 689999999999863 45
Q ss_pred HHHHhcceEEEecccccccHhHHHHHhcCCC---CC---HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHH
Q 000751 380 LEWLRSQIGLVTQEPALLSLSIRDNIAYGRD---AT---LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKI 453 (1303)
Q Consensus 380 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~---~~---~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkq 453 (1303)
...+|+.|+||+|++.+|..|++||+.++.. .. ++++.++++.+++... .++........|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDE-------CKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcch-------hhhhhCCCcccCCHHHHH
Confidence 6778889999999999998899999998642 11 2334455555554322 223345566789999999
Q ss_pred HHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeC-----------ce
Q 000751 454 KLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDE-----------GR 521 (1303)
Q Consensus 454 rialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~-----------G~ 521 (1303)
|++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||++++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 99999999999999999999999999999999999998877899999999999875 5999999996 67
Q ss_pred EeeccChHHHhhc
Q 000751 522 LFEMGTHDELLAT 534 (1303)
Q Consensus 522 i~~~g~~~~l~~~ 534 (1303)
+++.|+.+++...
T Consensus 242 ~~~~~~~~~~~~~ 254 (269)
T PRK14259 242 LVEFNETKKIFNS 254 (269)
T ss_pred EEEeCCHHHHHhC
Confidence 8999999998653
No 362
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-40 Score=366.44 Aligned_cols=218 Identities=25% Similarity=0.424 Sum_probs=185.9
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-----CccEEEECCeeCCCC--CH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-----VAGQVLLDGRDLKLY--NL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~~--~~ 1125 (1303)
.|+++|++++|++. ++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~~~---~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGEK---QALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECCe---eeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 58999999999642 499999999999999999999999999999999999875 799999999998653 44
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCCC--C-C----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARHN--A-S----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~--~-~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
..+|++++|+||++.+|+.|++||+.++... . + .+++.++++.+++.+.+.. ........||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHHH
Confidence 5778999999999999999999999865311 1 1 2345566777766433321 22344568999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++||||++++|+|||||||||+||+.+...+.+.|++..+ ++|+|+|||+++.+. .||+|++|++|++++.|++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 232 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEK 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHH
Confidence 999999999999999999999999999999999999998765 489999999999875 499999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14270 233 IFLE 236 (251)
T ss_pred HhcC
Confidence 9754
No 363
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-40 Score=367.85 Aligned_cols=217 Identities=29% Similarity=0.475 Sum_probs=185.3
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~ 380 (1303)
.|+++||+++|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .+.
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 3 KISVKDLDLFYG---DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred eEEEEEEEEEEC---CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 589999999995 34699999999999999999999999999999999999863 69999999999864 355
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCC---CC-C----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGR---DA-T----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
..+|+.|+||+|++.+|+.|++||+.++. .. . ++++.++++.+++.+.+. ........+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCHHHH
Confidence 66788999999999999999999999863 11 1 234455555555543332 234456678999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998877899999999999875 4999999999999999999988
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
...
T Consensus 233 ~~~ 235 (250)
T PRK14240 233 FTN 235 (250)
T ss_pred HhC
Confidence 643
No 364
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-40 Score=362.09 Aligned_cols=208 Identities=25% Similarity=0.388 Sum_probs=177.9
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
|+++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++++++
T Consensus 1 i~~~~~~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYG---DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEEC---CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 57899999995 34699999999999999999999999999999999999999999999999988653 356678899
Q ss_pred EEeccccccc-HhHHHHHhcCC---CCC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHh
Q 000751 389 LVTQEPALLS-LSIRDNIAYGR---DAT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARA 460 (1303)
Q Consensus 389 ~v~Q~~~l~~-~ti~~ni~~~~---~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARa 460 (1303)
||+|++.++. .|++||+.++. ..+ ++++.++++..++.+.... ....||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADR-----------LVKTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------ChhhCCHHHHHHHHHHHH
Confidence 9999998886 59999998742 122 2345556666666544332 235799999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHH
Q 000751 461 VLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 461 l~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 531 (1303)
++.+|++|||||||++||+++.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999999999999988753 7899999999998864 999999999999999987764
No 365
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=365.65 Aligned_cols=218 Identities=26% Similarity=0.453 Sum_probs=185.9
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-----CccEEEECCeeCC-CCCHH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-----VAGQVLLDGRDLK-LYNLR 1126 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~-~~~~~ 1126 (1303)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| .+|+|.+||.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4889999999974 2599999999999999999999999999999999999986 5999999999986 45667
Q ss_pred HhhcceEEEccCCccCcccHHHHHHcCCCC--C-C----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHH
Q 000751 1127 WLRNHLGLVQQEPIIFSTTIRENIIYARHN--A-S----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQ 1199 (1303)
Q Consensus 1127 ~lR~~i~~VpQdp~LF~gTIreNl~~g~~~--~-~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1199 (1303)
.+|+.++|+||+|.+|+.|++||+.++... . + ++++.++++.+++.+.+. ........+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHH
Confidence 889999999999999999999999875321 1 1 123455566666544332 2233445689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHHH
Q 000751 1200 RIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDSL 1278 (1303)
Q Consensus 1200 RlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~eL 1278 (1303)
|++||||++.+|+||||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|+|++.|+++++
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVI 231 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999998865 4899999999998765 999999999999999999998
Q ss_pred hhc
Q 000751 1279 LAK 1281 (1303)
Q Consensus 1279 l~~ 1281 (1303)
..+
T Consensus 232 ~~~ 234 (249)
T PRK14253 232 FSN 234 (249)
T ss_pred HcC
Confidence 754
No 366
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-40 Score=368.40 Aligned_cols=219 Identities=26% Similarity=0.419 Sum_probs=186.9
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-----CccEEEECCeeCCC--CC
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-----VAGQVLLDGRDLKL--YN 1124 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~--~~ 1124 (1303)
+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 36999999999964 2599999999999999999999999999999999999985 48999999999864 45
Q ss_pred HHHhhcceEEEccCCccCcccHHHHHHcCCCC---CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHH
Q 000751 1125 LRWLRNHLGLVQQEPIIFSTTIRENIIYARHN---AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQ 1197 (1303)
Q Consensus 1125 ~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~---~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1197 (1303)
...+|++++||||+|.+|+.|++||+.++... .+ ++.+.++++.+++++++.. ........|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKD-------KLNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHH
Confidence 56788999999999999999999999864211 11 2345677777777554432 1234456899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEe-----CCEEEE
Q 000751 1198 KQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLN-----GGRIVE 1271 (1303)
Q Consensus 1198 rQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~-----~G~Ive 1271 (1303)
|||++|||||+++|++|||||||++||+.+...+.+.|++... ++|+|+|||+++.+. .||++++|+ +|++++
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~ 234 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVE 234 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEE
Confidence 9999999999999999999999999999999999999998755 589999999999875 599999998 599999
Q ss_pred ecChHHHhhc
Q 000751 1272 EGTHDSLLAK 1281 (1303)
Q Consensus 1272 ~Gt~~eLl~~ 1281 (1303)
.|+++++.+.
T Consensus 235 ~~~~~~~~~~ 244 (259)
T PRK14260 235 FGVTTQIFSN 244 (259)
T ss_pred eCCHHHHhcC
Confidence 9999999764
No 367
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-39 Score=360.76 Aligned_cols=212 Identities=27% Similarity=0.486 Sum_probs=185.0
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++|++++|++ .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 1 l~~~~l~~~~~~----~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWKE----FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDIS 74 (235)
T ss_pred CeeEeEEEEeCC----ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEE
Confidence 578999999963 28999999999999999999999999999999999999999999999999987654 368999
Q ss_pred EEccCCccCc-ccHHHHHHcCCCC--C----CHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1134 LVQQEPIIFS-TTIRENIIYARHN--A----SEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1134 ~VpQdp~LF~-gTIreNl~~g~~~--~----~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
|+||++.+|+ .|++||+.++... . .++++.++++.+++.+++.+.| ..||||||||++||||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lara 143 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKP-----------ETLSGGEQQRVAIARA 143 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCc-----------ccCCHHHHHHHHHHHH
Confidence 9999999995 7999999865321 1 1335667777777776655443 4799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
++++|++|+|||||++||+.+.+.+.+.+++...+ ++|+|++||++..+. .||+|++|++|++++.|+++++.+..
T Consensus 144 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 144 LVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred HHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 99999999999999999999999999999986543 689999999999876 49999999999999999999998753
No 368
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.2e-40 Score=366.25 Aligned_cols=215 Identities=26% Similarity=0.401 Sum_probs=181.7
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHH-Hhcce
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW-LRSQI 387 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~~~~i 387 (1303)
|+++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYG---KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeC---CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 47899999995 346999999999999999999999999999999999999999999999999998776654 35679
Q ss_pred EEEecccccccH-hHHHHHhcCC---CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhcc
Q 000751 388 GLVTQEPALLSL-SIRDNIAYGR---DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLL 463 (1303)
Q Consensus 388 ~~v~Q~~~l~~~-ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~ 463 (1303)
+|++|++.+|.. |++||+.++. ....++..+ .+++.++.+ |++.........||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREE-----KLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999875 9999998753 122222111 122334443 55555566677899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhh
Q 000751 464 NPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 464 ~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999998875 4789999999998765 599999999999999999988754
No 369
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-40 Score=383.00 Aligned_cols=213 Identities=25% Similarity=0.453 Sum_probs=183.5
Q ss_pred ccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcc
Q 000751 307 GNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQ 386 (1303)
Q Consensus 307 ~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 386 (1303)
..|+++|++++|+ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+. .++.
T Consensus 18 ~~l~l~~v~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFD---GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 3599999999994 3469999999999999999999999999999999999999999999999999987664 4678
Q ss_pred eEEEeccccccc-HhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHH
Q 000751 387 IGLVTQEPALLS-LSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIA 458 (1303)
Q Consensus 387 i~~v~Q~~~l~~-~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialA 458 (1303)
||||+|++.+|. .||+|||.|+. ..+. +++.+.++..++.++.. ....+||||||||+|||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~-----------~~~~~LSgGq~QRVaLA 161 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAK-----------RKPHQLSGGQRQRVALA 161 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHHHH
Confidence 999999999996 69999999874 2232 23445555555544433 34457999999999999
Q ss_pred HhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccc-cccCEEEEEeCceEeeccChHHHhhcC
Q 000751 459 RAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLI-RNADYIAVMDEGRLFEMGTHDELLATG 535 (1303)
Q Consensus 459 Ral~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~~ 535 (1303)
|||+++|++|+||||||+||+.+...+.+.++++. .+.|+|+|||+++.+ ..||+|++|++|++++.|+++++..+.
T Consensus 162 RAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 162 RSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999988887664 379999999999986 469999999999999999999998764
No 370
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=370.53 Aligned_cols=215 Identities=26% Similarity=0.442 Sum_probs=187.2
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCC---cEEEECCeecCCCCHHHHh
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTL---GEVLLDGENIKNLKLEWLR 384 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~---G~i~~~g~~~~~~~~~~~~ 384 (1303)
.|+++|++|+|++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++...+...++
T Consensus 5 ~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 5 IVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred eEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 58999999999632 3469999999999999999999999999999999999999998 8999999999877777788
Q ss_pred cceEEEecccc--cccHhHHHHHhcCC---CCCHH----HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHH
Q 000751 385 SQIGLVTQEPA--LLSLSIRDNIAYGR---DATLD----QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKL 455 (1303)
Q Consensus 385 ~~i~~v~Q~~~--l~~~ti~~ni~~~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqri 455 (1303)
++|+||+|+|. +++.|++|||.++. ..+.+ ++.++++.+++.++... ...+||||||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LS~G~~qrv 152 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDS-----------EPANLSGGQKQRV 152 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcC-----------CcccCCHHHHHHH
Confidence 89999999984 66889999999863 23332 35556666666554443 3468999999999
Q ss_pred HHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhh
Q 000751 456 SIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 456 alARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+..||++++|++|++++.|+++++..
T Consensus 153 ~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 153 AIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999988753 799999999999988899999999999999999988865
Q ss_pred c
Q 000751 534 T 534 (1303)
Q Consensus 534 ~ 534 (1303)
.
T Consensus 233 ~ 233 (282)
T PRK13640 233 K 233 (282)
T ss_pred C
Confidence 3
No 371
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=380.71 Aligned_cols=212 Identities=26% Similarity=0.407 Sum_probs=185.3
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCC----CHHHhh
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLY----NLRWLR 1129 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~----~~~~lR 1129 (1303)
|++ |++++|.+. .+ |+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++... +....|
T Consensus 2 l~~-~l~k~~~~~----~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGDL----CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCCE----EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 999999632 23 99999999999999999999999999999999999999999999998753 244568
Q ss_pred cceEEEccCCccCc-ccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHh
Q 000751 1130 NHLGLVQQEPIIFS-TTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVL 1208 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~-gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAll 1208 (1303)
++++||+|++.+|+ .|++||+.++.....++++.++++..++.++..+.| .+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDRYP-----------GSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhCCc-----------ccCCHHHHHHHHHHHHHH
Confidence 89999999999997 599999998754445567788888887766655443 489999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1209 KNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1209 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
++|++||||||||+||+.+.+.+.+.|++..++ ++|+|+|||+++.+. .||+|++|++|++++.|+++++.++.
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p 220 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASS 220 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCc
Confidence 999999999999999999999999999987543 689999999998765 59999999999999999999998763
No 372
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-40 Score=370.74 Aligned_cols=212 Identities=27% Similarity=0.433 Sum_probs=185.1
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.|+++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.|
T Consensus 11 ~l~i~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVP---GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEEC---CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 589999999995 34799999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEEeccccccc-HhHHHHHhcCCC-----------CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHH
Q 000751 388 GLVTQEPALLS-LSIRDNIAYGRD-----------ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKL 455 (1303)
Q Consensus 388 ~~v~Q~~~l~~-~ti~~ni~~~~~-----------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqri 455 (1303)
+||+|++.++. .|+.||+.++.. ..++++.++++.+++.+++... ..+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRL-----------VDSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----------cccCCHHHHHHH
Confidence 99999987664 599999997631 1123456666666665444333 347999999999
Q ss_pred HHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHh
Q 000751 456 SIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELL 532 (1303)
Q Consensus 456 alARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 532 (1303)
+||||++.+|+||||||||++||+.+.+.+.+.|.++. .++|+|++||+++.+. .||+|++|++|++++.|+.+++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 99999999999999999999999999999999998874 3799999999999985 59999999999999999998876
Q ss_pred h
Q 000751 533 A 533 (1303)
Q Consensus 533 ~ 533 (1303)
.
T Consensus 237 ~ 237 (265)
T PRK10575 237 R 237 (265)
T ss_pred C
Confidence 4
No 373
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=9e-40 Score=365.49 Aligned_cols=214 Identities=24% Similarity=0.329 Sum_probs=176.6
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcc--ccCCccEEEECCeeCCCCCHHHh-hc
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERF--YDPVAGQVLLDGRDLKLYNLRWL-RN 1130 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl--~~~~~G~I~idG~di~~~~~~~l-R~ 1130 (1303)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++...+.... |.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 578999999964 2599999999999999999999999999999999999 47999999999999998887654 45
Q ss_pred ceEEEccCCccCcc-cHHHHHHcCCCC---------CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChH
Q 000751 1131 HLGLVQQEPIIFST-TIRENIIYARHN---------AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPG 1196 (1303)
Q Consensus 1131 ~i~~VpQdp~LF~g-TIreNl~~g~~~---------~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1196 (1303)
.++||||+|.+|++ |++||+.+.... .+ ++++.++++..++.+. -.+..++ ..||||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~~---~~LS~G 148 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEE------FLNRSVN---EGFSGG 148 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchh------hcccccc---cCcCHH
Confidence 69999999999986 899999653210 11 1233444444444211 1122221 249999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh--cCEEEEEeCCEEEEecC
Q 000751 1197 QKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH--VDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1197 QrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~--~D~Iivl~~G~Ive~Gt 1274 (1303)
||||++|||||+++|++|||||||++||+.+.+.+.+.|++..++++|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 149 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~ 228 (243)
T TIGR01978 149 EKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGD 228 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecC
Confidence 9999999999999999999999999999999999999999875556899999999999876 79999999999999999
Q ss_pred hHHHh
Q 000751 1275 HDSLL 1279 (1303)
Q Consensus 1275 ~~eLl 1279 (1303)
++++.
T Consensus 229 ~~~~~ 233 (243)
T TIGR01978 229 VELAK 233 (243)
T ss_pred HHHhc
Confidence 98654
No 374
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=367.28 Aligned_cols=220 Identities=25% Similarity=0.443 Sum_probs=187.4
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCC-----ccEEEECCeeCCC--CC
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPV-----AGQVLLDGRDLKL--YN 1124 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~-----~G~I~idG~di~~--~~ 1124 (1303)
+.|+++||+++|++. .+|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+
T Consensus 6 ~~l~~~nl~~~~~~~---~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDTQ---KILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCCe---eEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 469999999999643 4999999999999999999999999999999999999985 8999999999853 35
Q ss_pred HHHhhcceEEEccCCccCcccHHHHHHcCCC--CC-C----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHH
Q 000751 1125 LRWLRNHLGLVQQEPIIFSTTIRENIIYARH--NA-S----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQ 1197 (1303)
Q Consensus 1125 ~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1197 (1303)
...+|+.++|+||++.+|+.|++||+.++.. .. + ++.+.++++.+++.+++.. ..+.....|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKH-------KIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHH
Confidence 5678899999999999999999999986421 11 1 2345667777776554432 2344556899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHh-hcCEEEEEeC-----CEEE
Q 000751 1198 KQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMR-HVDNIVVLNG-----GRIV 1270 (1303)
Q Consensus 1198 rQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~-~~D~Iivl~~-----G~Iv 1270 (1303)
|||++||||++++|+||||||||++||+++...+.+.|++... .++|+|+|||+++.+. .||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 9999999999999999999999999999999999999998643 3699999999999875 5899999999 9999
Q ss_pred EecChHHHhhc
Q 000751 1271 EEGTHDSLLAK 1281 (1303)
Q Consensus 1271 e~Gt~~eLl~~ 1281 (1303)
+.|+++++.+.
T Consensus 236 ~~~~~~~~~~~ 246 (261)
T PRK14258 236 EFGLTKKIFNS 246 (261)
T ss_pred EeCCHHHHHhC
Confidence 99999999765
No 375
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-40 Score=370.15 Aligned_cols=219 Identities=29% Similarity=0.473 Sum_probs=188.2
Q ss_pred CccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecCC--C
Q 000751 306 HGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIKN--L 378 (1303)
Q Consensus 306 ~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~ 378 (1303)
...|+++|++|+|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 23 ~~~l~~~nl~~~~~---~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYG---DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEEC---CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 34699999999995 34699999999999999999999999999999999999984 89999999999864 3
Q ss_pred CHHHHhcceEEEecccccccHhHHHHHhcCC---CC-C----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChH
Q 000751 379 KLEWLRSQIGLVTQEPALLSLSIRDNIAYGR---DA-T----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEE 450 (1303)
Q Consensus 379 ~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgG 450 (1303)
+...+|+.++|++|++.+|..|++||+.++. .. . ++++.++++.+++.+++. +..+..+..||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCcccCCHH
Confidence 4567789999999999999889999998752 11 1 233555566665544332 2445677899999
Q ss_pred HHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChH
Q 000751 451 QKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHD 529 (1303)
Q Consensus 451 qkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~ 529 (1303)
||||++||||++++|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 99999999999999999999999999999999999999998877899999999999875 59999999999999999999
Q ss_pred HHhhc
Q 000751 530 ELLAT 534 (1303)
Q Consensus 530 ~l~~~ 534 (1303)
++...
T Consensus 253 ~~~~~ 257 (272)
T PRK14236 253 TLFTS 257 (272)
T ss_pred HHhcC
Confidence 88654
No 376
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=366.28 Aligned_cols=214 Identities=24% Similarity=0.383 Sum_probs=184.6
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCC--------ccEEEECCeeCCCCCH
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPV--------AGQVLLDGRDLKLYNL 1125 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~--------~G~I~idG~di~~~~~ 1125 (1303)
|+++|++++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++...+.
T Consensus 2 l~~~nl~~~~~~~---~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRHR---AILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECCE---eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 7899999999643 5999999999999999999999999999999999999998 9999999999998888
Q ss_pred HHhhcceEEEccCCc-cCcccHHHHHHcCCC-C------CC---HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCC
Q 000751 1126 RWLRNHLGLVQQEPI-IFSTTIRENIIYARH-N------AS---EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLT 1194 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~-LF~gTIreNl~~g~~-~------~~---~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1194 (1303)
..+|+.++||||++. +|+.|++||+.++.. . .+ ++.++++++..++. +.++.....||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS 147 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGAT-----------ALVGRDVTTLS 147 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcH-----------hhhcCCcccCC
Confidence 888889999999986 578899999987531 1 11 12345555555543 33444556899
Q ss_pred hHHHHHHHHHHHHh---------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEE
Q 000751 1195 PGQKQRIAIARVVL---------KNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVV 1263 (1303)
Q Consensus 1195 gGQrQRlaLARAll---------r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iiv 1263 (1303)
||||||++|||||+ .+|++|||||||++||+.+.+.+.+.|++..++ ++|+|+|||+++.+. .||+|++
T Consensus 148 gG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~ 227 (272)
T PRK13547 148 GGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAM 227 (272)
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEE
Confidence 99999999999999 599999999999999999999999999987553 689999999999885 6999999
Q ss_pred EeCCEEEEecChHHHhhc
Q 000751 1264 LNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1264 l~~G~Ive~Gt~~eLl~~ 1281 (1303)
|++|+|++.|+++++++.
T Consensus 228 l~~G~i~~~g~~~~~~~~ 245 (272)
T PRK13547 228 LADGAIVAHGAPADVLTP 245 (272)
T ss_pred EECCeEEEecCHHHHcCH
Confidence 999999999999998763
No 377
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=6.7e-40 Score=375.65 Aligned_cols=212 Identities=27% Similarity=0.441 Sum_probs=181.2
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.|+++|++++|+ +..+|+||||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...|++|
T Consensus 7 ~i~i~~l~k~~~---~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 7 PIDFRNVEKRYG---DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred eEEEEeEEEEEC---CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 599999999995 357999999999999999999999999999999999999999999999999997654 4578899
Q ss_pred EEEeccccccc-HhHHHHHhcC-C--CCCHHH----HHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHH
Q 000751 388 GLVTQEPALLS-LSIRDNIAYG-R--DATLDQ----IEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIAR 459 (1303)
Q Consensus 388 ~~v~Q~~~l~~-~ti~~ni~~~-~--~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialAR 459 (1303)
|||||++.++. .|++||+.+. . ..+..+ +.++++..++ ++..++.+ .+||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~----~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKL-------ENKADAKV----GELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-------chHhcCch----hhCCHHHHHHHHHHH
Confidence 99999999885 7999999853 2 223222 2333333333 23334444 479999999999999
Q ss_pred hhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHhhc
Q 000751 460 AVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 460 al~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999998875 48999999999999865 999999999999999999998653
No 378
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1e-39 Score=374.29 Aligned_cols=212 Identities=22% Similarity=0.410 Sum_probs=182.9
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
++++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.. +...+|++++
T Consensus 3 l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 789999999963 359999999999999999999999999999999999999999999999999977 4467889999
Q ss_pred EEccCCccCcc-cHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1134 LVQQEPIIFST-TIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1134 ~VpQdp~LF~g-TIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
|+||+|.+|++ |++||+.+... ..+ .+++.++++..++. ........+||||||||++||||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLR-----------PEQHKKIGQLSKGYRQRVGLAQA 147 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCc-----------hHhcCchhhCCHHHHHHHHHHHH
Confidence 99999999976 99999975321 112 23344444444443 33344456899999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHHHhhc
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
|+++|++|||||||++||+.+.+.+++.|++... ++|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999998754 6999999999998765 999999999999999999999764
No 379
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=7.6e-40 Score=375.98 Aligned_cols=200 Identities=24% Similarity=0.392 Sum_probs=173.5
Q ss_pred ceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceEEEccCCccCcc-cHHH
Q 000751 1070 LVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFST-TIRE 1148 (1303)
Q Consensus 1070 ~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~VpQdp~LF~g-TIre 1148 (1303)
++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.. ....+|++++||||++.+|+. |++|
T Consensus 7 ~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~e 85 (302)
T TIGR01188 7 KAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGRE 85 (302)
T ss_pred eEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHHH
Confidence 59999999999999999999999999999999999999999999999999876 345678999999999999976 9999
Q ss_pred HHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCC
Q 000751 1149 NIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSS 1222 (1303)
Q Consensus 1149 Nl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSa 1222 (1303)
|+.+... ..+ ++++.++++..++.+.. +. ...+||||||||++|||||+++|++|||||||++
T Consensus 86 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~----~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 86 NLEMMGRLYGLPKDEAEERAEELLELFELGEAA-------DR----PVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-------CC----chhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9986421 112 23455666666664332 22 2348999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1223 IESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1223 LD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
||+.+.+.+++.|++...+++|+|++||+++.+. .||+|++|++|++++.|+++++.++
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 9999999999999987655789999999999886 5999999999999999999999765
No 380
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2e-39 Score=365.96 Aligned_cols=224 Identities=25% Similarity=0.405 Sum_probs=186.7
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCC---ccEEEECCeeCCCC-----C
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPV---AGQVLLDGRDLKLY-----N 1124 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~---~G~I~idG~di~~~-----~ 1124 (1303)
-|+++||+++|++. ++|+|+||+|++||+++|+|+||||||||+++|.|+++|+ +|+|.+||.++... +
T Consensus 4 ~l~~~nl~~~~~~~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQH---QALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCCe---EEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 48999999999643 5999999999999999999999999999999999999986 49999999998654 3
Q ss_pred HHHhhcceEEEccCCccCc-ccHHHHHHcCCCC--------------CCHHHHHHHHHHhchHHHHHhCCCCcccccCCC
Q 000751 1125 LRWLRNHLGLVQQEPIIFS-TTIRENIIYARHN--------------ASEAEVKEAARIANAHHFISSLPHGYDTHVGMR 1189 (1303)
Q Consensus 1125 ~~~lR~~i~~VpQdp~LF~-gTIreNl~~g~~~--------------~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~ 1189 (1303)
...+|++++|+||++.+|+ .|++||+.++... ..++++.++++..++.+.+.. .
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQ-----------R 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhC-----------C
Confidence 4567889999999999887 5999999875321 012345666666666544432 3
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhH-hhcCEEEEEeCC
Q 000751 1190 GVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMM-RHVDNIVVLNGG 1267 (1303)
Q Consensus 1190 G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti-~~~D~Iivl~~G 1267 (1303)
..+||||||||++||||++.+|++|||||||++||.++.+.+.+.|++... +++|+|++||+++.+ ..||+|++|++|
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g 229 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQG 229 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 347999999999999999999999999999999999999999999998753 268999999999975 569999999999
Q ss_pred EEEEecChHHHhhcCchhHHHHhhh
Q 000751 1268 RIVEEGTHDSLLAKNGLYVRLMQPH 1292 (1303)
Q Consensus 1268 ~Ive~Gt~~eLl~~~g~y~~l~~~~ 1292 (1303)
++++.|+++++ ......+++...
T Consensus 230 ~i~~~g~~~~~--~~~~~~~~~~~~ 252 (262)
T PRK09984 230 HVFYDGSSQQF--DNERFDHLYRSI 252 (262)
T ss_pred EEEEeCCHHHh--ccHHHHHHHhhh
Confidence 99999999997 233455555433
No 381
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-39 Score=364.78 Aligned_cols=218 Identities=26% Similarity=0.454 Sum_probs=187.2
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEECCeeCCC--CCH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD-----PVAGQVLLDGRDLKL--YNL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~~~ 1125 (1303)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++.. .+.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 3789999999964 259999999999999999999999999999999999875 389999999999875 346
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCC--C-CC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARH--N-AS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~-~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
..+|++++|+||+|.+|++|++||+.++.. . .+ ++++.++++.+++.+++..+ + ...+..||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~---~----~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK---L----DKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH---H----hCCcccCCHHHH
Confidence 678999999999999999999999986531 1 12 23456677787876655422 2 344568999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++||||++++|+||||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~ 231 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQ 231 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHH
Confidence 999999999999999999999999999999999999998754 6999999999987655 89999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+...
T Consensus 232 ~~~~ 235 (250)
T PRK14266 232 IFIN 235 (250)
T ss_pred HHhC
Confidence 9765
No 382
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=6.2e-40 Score=347.70 Aligned_cols=178 Identities=32% Similarity=0.532 Sum_probs=165.2
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
|+++|++|+|++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+++.++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999632 24699999999999999999999999999999999999999999999999988766 566788999
Q ss_pred EEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEE
Q 000751 389 LVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSIL 468 (1303)
Q Consensus 389 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~il 468 (1303)
||+|++++|+.|++||+ ...||||||||++||||++++|++|
T Consensus 79 ~~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~l 120 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIV 120 (178)
T ss_pred EEccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999998 4579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccccCEEEEEeCceEeecc
Q 000751 469 LLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMDEGRLFEMG 526 (1303)
Q Consensus 469 ilDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g 526 (1303)
||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 121 llDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 121 LLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999998887789999999999999889999999999998754
No 383
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=5.8e-40 Score=360.55 Aligned_cols=206 Identities=26% Similarity=0.422 Sum_probs=174.5
Q ss_pred EEEEEEEEEcCCCCC-CCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 309 IEFRNVYFSYLSRPE-IPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~-~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
|+++||+++|++... .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. ...+++++|
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999963211 169999999999999999999999999999999999999999999999999875 345678899
Q ss_pred EEEeccccccc-HhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHH
Q 000751 388 GLVTQEPALLS-LSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIAR 459 (1303)
Q Consensus 388 ~~v~Q~~~l~~-~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialAR 459 (1303)
+||+|++.+|. .|++||+.+.. .... +++.++++..++ +.........||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGM-----------EELLDRRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-----------HHHHhhhhhhcCHHHHHHHHHHH
Confidence 99999999987 59999998642 1222 233444444444 33344566789999999999999
Q ss_pred hhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeecc
Q 000751 460 AVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMG 526 (1303)
Q Consensus 460 al~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g 526 (1303)
|++.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+. .||++++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999998874 5899999999999876 49999999999998754
No 384
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=365.85 Aligned_cols=217 Identities=29% Similarity=0.504 Sum_probs=185.5
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCC-----CcEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPT-----LGEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~--~~~ 380 (1303)
.|+++|++|+|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 4 ~l~~~~l~~~~~---~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYH---KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEEC---CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 589999999995 346999999999999999999999999999999999999997 6999999999864 345
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCCC---CC-H----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGRD---AT-L----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~---~~-~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
..+|+.++||+|++.+|+.|++||+.++.. .. . +.+.++++..++.+++ .+.....+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEV-------KDNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhh-------hhHhhCCcccCCHHHH
Confidence 677889999999999998999999998631 11 1 2233344444443332 2335667789999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+.+++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999888778999999999999865 899999999999999999988
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
...
T Consensus 234 ~~~ 236 (251)
T PRK14249 234 FSR 236 (251)
T ss_pred HhC
Confidence 654
No 385
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-40 Score=367.80 Aligned_cols=217 Identities=25% Similarity=0.399 Sum_probs=183.8
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccC--CC---CCcEEEECCeecCCC--CH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFY--DP---TLGEVLLDGENIKNL--KL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~---~~G~i~~~g~~~~~~--~~ 380 (1303)
.++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|++ .| ++|+|.++|+++... +.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYN---KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEEC---CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 489999999995 346999999999999999999999999999999999995 46 599999999998643 34
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCC---CC-C----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGR---DA-T----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
..+|+.|+||+|++.+|+.|++||+.++. .. . ++++.++++.+++.+.+. +.......+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCHHHH
Confidence 56788999999999999999999998752 11 1 123344455555433222 234566778999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++||||++.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998877899999999999875 5999999999999999999998
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
.+.
T Consensus 235 ~~~ 237 (252)
T PRK14239 235 FMN 237 (252)
T ss_pred HhC
Confidence 754
No 386
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=381.77 Aligned_cols=199 Identities=30% Similarity=0.461 Sum_probs=173.7
Q ss_pred CcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHH----hcceEEEeccccccc-H
Q 000751 325 PILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWL----RSQIGLVTQEPALLS-L 399 (1303)
Q Consensus 325 ~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----~~~i~~v~Q~~~l~~-~ 399 (1303)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+ +++|+||+|++.+|. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999988876554 468999999999985 6
Q ss_pred hHHHHHhcCC---CCC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeC
Q 000751 400 SIRDNIAYGR---DAT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDE 472 (1303)
Q Consensus 400 ti~~ni~~~~---~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe 472 (1303)
|++||+.++. ..+ ++++.++++..++.++..+. ..+||||||||++|||||+.+|++|||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~-----------~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSY-----------PDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcC-----------cccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 9999999863 122 23455566666665554443 35899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhc
Q 000751 473 VTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 473 ~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
||++||+.+.+.+++.|.++. .++|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC
Confidence 999999999999999998874 4899999999999875 5999999999999999999998765
No 387
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-40 Score=368.18 Aligned_cols=217 Identities=28% Similarity=0.451 Sum_probs=184.4
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecCCC--CH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIKNL--KL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 380 (1303)
.|+++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 12 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYG---EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 599999999995 34699999999999999999999999999999999999985 799999999998643 34
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCC---CCCHH----HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGR---DATLD----QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKI 453 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkq 453 (1303)
..+++.++||+|++.+|..|++||+.++. ..+.+ ++.++++.+++.+++ ..........|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhhCCHHHHH
Confidence 45778899999999999999999998753 22222 344455555543221 12234556789999999
Q ss_pred HHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHh
Q 000751 454 KLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELL 532 (1303)
Q Consensus 454 rialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 532 (1303)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999999998877899999999999885 59999999999999999999986
Q ss_pred hc
Q 000751 533 AT 534 (1303)
Q Consensus 533 ~~ 534 (1303)
+.
T Consensus 242 ~~ 243 (258)
T PRK14268 242 HN 243 (258)
T ss_pred cC
Confidence 54
No 388
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-40 Score=367.17 Aligned_cols=217 Identities=29% Similarity=0.464 Sum_probs=184.8
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhcc---CCC--CCcEEEECCeecCCC--CH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERF---YDP--TLGEVLLDGENIKNL--KL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~---~~~--~~G~i~~~g~~~~~~--~~ 380 (1303)
.|+++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+ ++| ++|+|.++|.++... +.
T Consensus 3 ~l~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYG---DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEEC---CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 489999999995 34699999999999999999999999999999999997 454 589999999998753 34
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCC---CC-C----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGR---DA-T----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
..+++.|+||+|++.+|..|++||+.++. .. . ++++.++++.+++.+++. +.....+..||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCHHHH
Confidence 56788999999999999899999998753 11 1 223455555555543332 334566778999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999999877899999999999885 5999999999999999999998
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
.++
T Consensus 233 ~~~ 235 (250)
T PRK14245 233 FTN 235 (250)
T ss_pred hcC
Confidence 754
No 389
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-39 Score=375.48 Aligned_cols=228 Identities=22% Similarity=0.303 Sum_probs=186.2
Q ss_pred cEEEEeeEEECCCC-CCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc----CCccEEEECCeeCCCCCHHH
Q 000751 1053 SIELKNVDFCYPSR-PEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD----PVAGQVLLDGRDLKLYNLRW 1127 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~-~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~----~~~G~I~idG~di~~~~~~~ 1127 (1303)
-|+++|++++|+.+ ....+|+||||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||+++.+++.+.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 37899999999642 12369999999999999999999999999999999999986 58999999999999888765
Q ss_pred hh----cceEEEccCCc--cCc-ccHHHHHHcCC------C----C--CCHHHHHHHHHHhchHHHHHhCCCCcccccCC
Q 000751 1128 LR----NHLGLVQQEPI--IFS-TTIRENIIYAR------H----N--ASEAEVKEAARIANAHHFISSLPHGYDTHVGM 1188 (1303)
Q Consensus 1128 lR----~~i~~VpQdp~--LF~-gTIreNl~~g~------~----~--~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge 1188 (1303)
++ ++|+||+|+|. +++ .||.+|+.... . . ...+++.++++.+++.+.-. ....
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~--------~~~~ 154 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKD--------AMRS 154 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHH--------HHhC
Confidence 53 47999999996 333 58999986321 0 0 01235667777777743210 1122
Q ss_pred CCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeC
Q 000751 1189 RGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNG 1266 (1303)
Q Consensus 1189 ~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~ 1266 (1303)
....||||||||++|||||+.+|+|||||||||+||+.+...+.+.|+++..+ +.|+|+|||+++.+. .||+|+||++
T Consensus 155 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 155 FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 33489999999999999999999999999999999999999999999987543 689999999999985 5999999999
Q ss_pred CEEEEecChHHHhhc-CchhHHH
Q 000751 1267 GRIVEEGTHDSLLAK-NGLYVRL 1288 (1303)
Q Consensus 1267 G~Ive~Gt~~eLl~~-~g~y~~l 1288 (1303)
|+|+|.|+++++.+. ...|.+.
T Consensus 235 G~ive~g~~~~i~~~p~~~y~~~ 257 (330)
T PRK15093 235 GQTVETAPSKELVTTPHHPYTQA 257 (330)
T ss_pred CEEEEECCHHHHHhCCCCHHHHH
Confidence 999999999999875 3456553
No 390
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=368.80 Aligned_cols=215 Identities=30% Similarity=0.440 Sum_probs=185.2
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.|+++|++++|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...++++|
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 48999999999632 24699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEecccc--cccHhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHH
Q 000751 388 GLVTQEPA--LLSLSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIA 458 (1303)
Q Consensus 388 ~~v~Q~~~--l~~~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialA 458 (1303)
+||+|+|. ++..|+++|+.++. .... +++.++++..++.++ ......+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLER-----------ADYEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCCcccCCHHHHHHHHHH
Confidence 99999985 45678999998863 1222 234444555544332 2344568999999999999
Q ss_pred HhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccccCEEEEEeCceEeeccChHHHhhc
Q 000751 459 RAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRNADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 459 Ral~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
||++.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999988753 7899999999998878999999999999999999988664
No 391
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=366.54 Aligned_cols=218 Identities=28% Similarity=0.463 Sum_probs=183.9
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-----CccEEEECCeeCCC--CCH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-----VAGQVLLDGRDLKL--YNL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~--~~~ 1125 (1303)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~~---~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGSF---HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECCE---eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 48999999999743 499999999999999999999999999999999999974 69999999999853 455
Q ss_pred HHhhcceEEEccCCccCc-ccHHHHHHcCCC---CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHH
Q 000751 1126 RWLRNHLGLVQQEPIIFS-TTIRENIIYARH---NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQ 1197 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~-gTIreNl~~g~~---~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1197 (1303)
..+|+.++|++|++.+|+ .|++||+.++.. ..+ ++.+.++++..++.+.+. ........+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVK-------DRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHH
Confidence 678899999999999997 599999976421 111 234455666666643321 22234456899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEe------CCEEE
Q 000751 1198 KQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLN------GGRIV 1270 (1303)
Q Consensus 1198 rQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~------~G~Iv 1270 (1303)
|||++||||++++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+. .||+|++|+ +|+|+
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~ 232 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLV 232 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEE
Confidence 9999999999999999999999999999999999999998754 589999999999875 699999997 89999
Q ss_pred EecChHHHhhc
Q 000751 1271 EEGTHDSLLAK 1281 (1303)
Q Consensus 1271 e~Gt~~eLl~~ 1281 (1303)
+.|++++++..
T Consensus 233 ~~~~~~~~~~~ 243 (258)
T PRK14241 233 EIDDTEKIFSN 243 (258)
T ss_pred ecCCHHHHHhC
Confidence 99999999764
No 392
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=369.37 Aligned_cols=217 Identities=26% Similarity=0.407 Sum_probs=184.0
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC-----CCCcEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD-----PTLGEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 380 (1303)
.|+++|++|+|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 21 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYG---EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeC---CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 589999999995 3569999999999999999999999999999999999864 789999999999864 344
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCCC---C-C----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGRD---A-T----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~---~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
..++++|+|++|++.+|.+|++||+.++.. . . ++.+.++++.+++.+.+ .........+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEV-------KDRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcch-------HHHHhcCcccCCHHHH
Confidence 567889999999999999999999987521 1 1 12344455555443222 1233456778999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998877899999999999875 5999999999999999999988
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
...
T Consensus 251 ~~~ 253 (268)
T PRK14248 251 FTS 253 (268)
T ss_pred HhC
Confidence 654
No 393
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=8.6e-40 Score=359.99 Aligned_cols=204 Identities=28% Similarity=0.480 Sum_probs=172.3
Q ss_pred EEEEEEEEEcCCCC-CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHH---Hh
Q 000751 309 IEFRNVYFSYLSRP-EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW---LR 384 (1303)
Q Consensus 309 i~~~~v~f~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~~ 384 (1303)
|+++||+++|++.. ..++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996321 246999999999999999999999999999999999999999999999999998776543 34
Q ss_pred -cceEEEeccccccc-HhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHH
Q 000751 385 -SQIGLVTQEPALLS-LSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKL 455 (1303)
Q Consensus 385 -~~i~~v~Q~~~l~~-~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqri 455 (1303)
+.|+||+|++.+|. .|++||+.++. ..+. +++.++++.. |++.........||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKV-----------GLEHRINHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CChhhhhCChhhCCHHHHHHH
Confidence 67999999999885 69999998742 2222 2233333433 344444455578999999999
Q ss_pred HHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccccCEEEEEeCceEe
Q 000751 456 SIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRNADYIAVMDEGRLF 523 (1303)
Q Consensus 456 alARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~~d~i~~l~~G~i~ 523 (1303)
+||||++++|++|||||||++||+++...+.+.|+++. .++|+|++||+++.+..+|+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999998875 379999999999998889999999999986
No 394
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-40 Score=367.84 Aligned_cols=217 Identities=30% Similarity=0.472 Sum_probs=184.0
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC-----CCCcEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD-----PTLGEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 380 (1303)
.|+++|++|+|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYG---NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEEC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 489999999995 3479999999999999999999999999999999999997 479999999999854 344
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCCC---C-C----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGRD---A-T----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~---~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
..+++.|+||+|++.+|+.|++||+.++.. . . ++++.++++..+++... .........+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET-------KDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch-------HHHhccChhhCCHHHH
Confidence 567889999999999999999999987631 1 1 12344455555543211 1123456678999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++||||++++|+++||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999998764 999999999999999999998
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
...
T Consensus 234 ~~~ 236 (251)
T PRK14251 234 FIA 236 (251)
T ss_pred HhC
Confidence 654
No 395
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-39 Score=370.32 Aligned_cols=219 Identities=26% Similarity=0.458 Sum_probs=182.1
Q ss_pred EEEEEEEEEcCCCC--CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCC----CHHH
Q 000751 309 IEFRNVYFSYLSRP--EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNL----KLEW 382 (1303)
Q Consensus 309 i~~~~v~f~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~ 382 (1303)
|+++||+|+|++.. ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999996321 14699999999999999999999999999999999999999999999999998754 3466
Q ss_pred HhcceEEEeccc--ccccHhHHHHHhcCC---CCCHHHHHHHHHHhcchHHHHhcccccC-ccccCCCCCCChHHHHHHH
Q 000751 383 LRSQIGLVTQEP--ALLSLSIRDNIAYGR---DATLDQIEEAAKIAHAHTFISSLEKGYE-TQVGRAGLALTEEQKIKLS 456 (1303)
Q Consensus 383 ~~~~i~~v~Q~~--~l~~~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~vg~~g~~LSgGqkqria 456 (1303)
+|+.|+|++|++ .+|+.|++||+.++. ..+.++..+.+ .+.++.+ |++ .........||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALA-----REKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999998 678899999998753 23333322211 1122222 333 2234556789999999999
Q ss_pred HHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhc
Q 000751 457 IARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 457 lARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
|||||+.+|++|||||||++||+++.+.+.+.|+++. .++|+|++||+++.+. .||++++|++|++++.|+++++...
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999998875 4799999999999885 5999999999999999999888654
No 396
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=9.5e-40 Score=359.77 Aligned_cols=209 Identities=22% Similarity=0.358 Sum_probs=180.1
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.|+++|++++|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.|
T Consensus 7 ~i~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAG---DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeC---CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 489999999995 35799999999999999999999999999999999999999999999999999888887888899
Q ss_pred EEEecccccccHhHHHHHhcCCC-----CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhc
Q 000751 388 GLVTQEPALLSLSIRDNIAYGRD-----ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVL 462 (1303)
Q Consensus 388 ~~v~Q~~~l~~~ti~~ni~~~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~ 462 (1303)
+|++|++.+|+.|++||+.++.. ..++++.+.++..++. ++.......+||||||||++|||||+
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~LS~G~~qrv~laral~ 153 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALP----------DTILTKNIAELSGGEKQRISLIRNLQ 153 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCC----------hHHhcCCcccCCHHHHHHHHHHHHHh
Confidence 99999999999999999987421 1122233333333332 23445667789999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccccCEEEEEe-CceEeeccChH
Q 000751 463 LNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRNADYIAVMD-EGRLFEMGTHD 529 (1303)
Q Consensus 463 ~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~~d~i~~l~-~G~i~~~g~~~ 529 (1303)
++|+++||||||++||+.+.+.+.+.++++. .++|+|++||+++.++.||++++|+ ++..+++|+|+
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 154 FMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999998874 3789999999999998899999995 67777889885
No 397
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=364.46 Aligned_cols=218 Identities=28% Similarity=0.441 Sum_probs=182.2
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCC-----ccEEEECCeeCCC--CCH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPV-----AGQVLLDGRDLKL--YNL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~-----~G~I~idG~di~~--~~~ 1125 (1303)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 4789999999963 35999999999999999999999999999999999999874 8999999999875 345
Q ss_pred HHhhcceEEEccCCccCcc-cHHHHHHcCCC--CC-CHHHHHH----HHHHhchHHHHHhCCCCcccccCCCCCCCChHH
Q 000751 1126 RWLRNHLGLVQQEPIIFST-TIRENIIYARH--NA-SEAEVKE----AARIANAHHFISSLPHGYDTHVGMRGVDLTPGQ 1197 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~g-TIreNl~~g~~--~~-~~~ei~~----al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1197 (1303)
..+|+.++|+||+|.+|+. |++||+.++.. .. .+++..+ .++..++++.+ ++.+++. ..+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~~----~~~LS~G~ 153 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRLKTP----ATGLSGGQ 153 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhhcCC----cccCCHHH
Confidence 5778999999999999984 99999986432 11 2333322 23334433222 2233443 45899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHhh-cCEEEEEeCCEEEEecChH
Q 000751 1198 KQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHD 1276 (1303)
Q Consensus 1198 rQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~ 1276 (1303)
|||++||||++++|+||||||||++||+.+...+.+.|++... ++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTD 232 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999998754 5999999999998875 9999999999999999999
Q ss_pred HHhhc
Q 000751 1277 SLLAK 1281 (1303)
Q Consensus 1277 eLl~~ 1281 (1303)
+++..
T Consensus 233 ~~~~~ 237 (252)
T PRK14272 233 QLFTN 237 (252)
T ss_pred HHHhC
Confidence 99875
No 398
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2e-39 Score=354.41 Aligned_cols=203 Identities=28% Similarity=0.485 Sum_probs=177.7
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
++++||+++|+. .++|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++.+.+ .+|++++
T Consensus 1 ~~~~~l~~~~~~-----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH-----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC-----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 368999999952 468999999999999999999999999999999999999999999999987654 4678899
Q ss_pred EEccCCccCcc-cHHHHHHcCC-CC-----CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1134 LVQQEPIIFST-TIRENIIYAR-HN-----ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1134 ~VpQdp~LF~g-TIreNl~~g~-~~-----~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
||||+|.+|.+ |++||+.++. +. ..++++.++++..++.+...+.|. +||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----------~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLPE-----------QLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCcc-----------cCCHHHHHHHHHHHH
Confidence 99999999975 9999997642 11 124467778888888777666553 799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecC
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt 1274 (1303)
++++|+|+||||||++||+++.+.+.+.|++..++ ++|+|+|||+++.+. .||++++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 99999999999999999999999999999987543 689999999999875 599999999999999875
No 399
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.2e-39 Score=369.54 Aligned_cols=215 Identities=29% Similarity=0.495 Sum_probs=188.7
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcce
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHL 1132 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1132 (1303)
.|+++||+.+|.. ...+|+||||+|++||.+|++||||||||||+++|.|++.|++|+|.++|.|...- ...+|+++
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4789999999973 12599999999999999999999999999999999999999999999999988765 77889999
Q ss_pred EEEccCCccCcc-cHHHHHHcCCC------CCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHH
Q 000751 1133 GLVQQEPIIFST-TIRENIIYARH------NASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIAR 1205 (1303)
Q Consensus 1133 ~~VpQdp~LF~g-TIreNl~~g~~------~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLAR 1205 (1303)
|||||+|.+++. |++|||.|... ...++.+.+.++..++.+.- +.. ...||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-------~~~----~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-------NKK----VRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-------Ccc----hhhcCHHHHHHHHHHH
Confidence 999999998875 99999976421 11245788888888875421 222 3479999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCC-cEEEEEecCchhHhh-cCEEEEEeCCEEEEecChHHHhhc
Q 000751 1206 VVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGN-KTTILIAHRAAMMRH-VDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1206 Allr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~-~TvI~IaHrl~ti~~-~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
||+.+|++|||||||++||+.+...+++.|+++..++ +||++.||.++.+.. ||+|++|++|+++..|+++++.+.
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999999987765 799999999998877 999999999999999999998765
No 400
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1e-39 Score=360.26 Aligned_cols=215 Identities=27% Similarity=0.424 Sum_probs=171.1
Q ss_pred EEEEeeEEECCCCC-CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc---CCccEEEECCeeCCCCCHHHhh
Q 000751 1054 IELKNVDFCYPSRP-EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD---PVAGQVLLDGRDLKLYNLRWLR 1129 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~---~~~G~I~idG~di~~~~~~~lR 1129 (1303)
++|+||+|+|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 57999999998642 2469999999999999999999999999999999999999 99999999999875 34678
Q ss_pred cceEEEccCCccCcc-cHHHHHHcCCCCCCHHHHHHHHHHhchHH-HHHhCCCCcccccCCCCCCCChHHHHHHHHHHHH
Q 000751 1130 NHLGLVQQEPIIFST-TIRENIIYARHNASEAEVKEAARIANAHH-FISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVV 1207 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~g-TIreNl~~g~~~~~~~ei~~al~~a~l~~-~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAl 1207 (1303)
++++|+||++.+|++ |++||+.++..........+.......++ .++.+ +++.........||||||||++||||+
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHHH
Confidence 899999999999987 99999986421100000000000000111 12211 222223344568999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCc--hhHhhcCEEEEEeCCEEEEec
Q 000751 1208 LKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRA--AMMRHVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1208 lr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl--~ti~~~D~Iivl~~G~Ive~G 1273 (1303)
+++|++|||||||++||+.+.+.+.+.+++....++|+|++||++ .....||+|++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999998755568999999998 356779999999999999876
No 401
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=9.6e-40 Score=364.05 Aligned_cols=216 Identities=25% Similarity=0.461 Sum_probs=181.5
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCC--CHHHHhcc
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNL--KLEWLRSQ 386 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~--~~~~~~~~ 386 (1303)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... +..++++.
T Consensus 2 l~~~~l~~~~~---~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFG---PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEEC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 68999999995 34699999999999999999999999999999999999999999999999998764 34567889
Q ss_pred eEEEeccccccc-HhHHHHHhcCC----CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhh
Q 000751 387 IGLVTQEPALLS-LSIRDNIAYGR----DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAV 461 (1303)
Q Consensus 387 i~~v~Q~~~l~~-~ti~~ni~~~~----~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal 461 (1303)
++|++|++.++. .|++||+.++. ..+.++..+. +.+.++.+ |++.........||||||||++||||+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQ-----ARELLAKV--GLAERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHH-----HHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHH
Confidence 999999998885 69999998753 1222221111 12223332 444444555678999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhc
Q 000751 462 LLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 462 ~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
+++|+++||||||++||+++...+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999998875 4899999999999986 4999999999999999999888654
No 402
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5e-40 Score=379.11 Aligned_cols=217 Identities=25% Similarity=0.368 Sum_probs=183.4
Q ss_pred cEEEEEEEEEcCCCC----------CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCC
Q 000751 308 NIEFRNVYFSYLSRP----------EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKN 377 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~----------~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~ 377 (1303)
-++++|++++|+... ...+++||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999998
Q ss_pred CCHHH---HhcceEEEeccc--ccc-cHhHHHHHhcCC-----CCCHHHH----HHHHHHhcchHHHHhcccccCccccC
Q 000751 378 LKLEW---LRSQIGLVTQEP--ALL-SLSIRDNIAYGR-----DATLDQI----EEAAKIAHAHTFISSLEKGYETQVGR 442 (1303)
Q Consensus 378 ~~~~~---~~~~i~~v~Q~~--~l~-~~ti~~ni~~~~-----~~~~~~~----~~~~~~~~~~~~i~~l~~g~~t~vg~ 442 (1303)
++... +|++|+||+|+| .|+ ..||.|||.++. ..+.++. .++++..++.+ .....
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~----------~~~~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLP----------NLINR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCh----------HHhcC
Confidence 87544 578899999998 466 589999997531 2343333 33444444421 12344
Q ss_pred CCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccc-cCEEEEEeC
Q 000751 443 AGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRN-ADYIAVMDE 519 (1303)
Q Consensus 443 ~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~-~d~i~~l~~ 519 (1303)
....||||||||++|||||+.+|++||+||||++||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 5568999999999999999999999999999999999999999999988753 8999999999999875 999999999
Q ss_pred ceEeeccChHHHhhc
Q 000751 520 GRLFEMGTHDELLAT 534 (1303)
Q Consensus 520 G~i~~~g~~~~l~~~ 534 (1303)
|+|++.|+.+++.++
T Consensus 238 G~ive~g~~~~i~~~ 252 (331)
T PRK15079 238 GHAVELGTYDEVYHN 252 (331)
T ss_pred CEEEEEcCHHHHHcC
Confidence 999999999999865
No 403
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-40 Score=367.32 Aligned_cols=211 Identities=24% Similarity=0.388 Sum_probs=183.7
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
++++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 3 l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYG---TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEEC---CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 78999999995 357999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEecccccccH-hHHHHHhcCC-CC----------CHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHH
Q 000751 389 LVTQEPALLSL-SIRDNIAYGR-DA----------TLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLS 456 (1303)
Q Consensus 389 ~v~Q~~~l~~~-ti~~ni~~~~-~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqria 456 (1303)
|++|++.++.+ |+.||+.++. .. .++++.++++..++.+. .......||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHL-----------ADRRLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHH-----------HcCCcccCCHHHHHHHH
Confidence 99999988865 9999999863 10 12234555555555433 23445689999999999
Q ss_pred HHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhh
Q 000751 457 IARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 457 lARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
||||++.+|++|||||||++||+++.+.+.+.|+++. +++|+|++||+++.+. .||++++|++|++++.|+.+++..
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 9999999999999999999999999999999998875 4899999999999876 599999999999999999988864
No 404
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-39 Score=368.93 Aligned_cols=216 Identities=25% Similarity=0.431 Sum_probs=181.8
Q ss_pred cEEEEEEEEEcCCCC--CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCC----CHH
Q 000751 308 NIEFRNVYFSYLSRP--EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNL----KLE 381 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~ 381 (1303)
.|+++|++++|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996321 24699999999999999999999999999999999999999999999999998653 245
Q ss_pred HHhcceEEEeccc--ccccHhHHHHHhcCC---CCCHHH----HHHHHHHhcchHHHHhcccccC-ccccCCCCCCChHH
Q 000751 382 WLRSQIGLVTQEP--ALLSLSIRDNIAYGR---DATLDQ----IEEAAKIAHAHTFISSLEKGYE-TQVGRAGLALTEEQ 451 (1303)
Q Consensus 382 ~~~~~i~~v~Q~~--~l~~~ti~~ni~~~~---~~~~~~----~~~~~~~~~~~~~i~~l~~g~~-t~vg~~g~~LSgGq 451 (1303)
..++.|+||+|+| .+|..|++|||.++. ..+.++ +.++++.+ |++ .........|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~~LSgGq 150 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKV-----------GLSEDLISKSPFELSGGQ 150 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-----------CCChhHhhCCcccCCHHH
Confidence 6778999999998 577889999998753 233322 23333333 343 22345567899999
Q ss_pred HHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChH
Q 000751 452 KIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHD 529 (1303)
Q Consensus 452 kqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~ 529 (1303)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +|.|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999998875 5899999999999875 59999999999999999999
Q ss_pred HHhhc
Q 000751 530 ELLAT 534 (1303)
Q Consensus 530 ~l~~~ 534 (1303)
++...
T Consensus 231 ~~~~~ 235 (287)
T PRK13641 231 EIFSD 235 (287)
T ss_pred HHhcC
Confidence 88653
No 405
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-40 Score=360.48 Aligned_cols=204 Identities=30% Similarity=0.441 Sum_probs=172.6
Q ss_pred EEEEEEEEEcCCCC-CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 309 IEFRNVYFSYLSRP-EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 309 i~~~~v~f~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
|+++|++++|++.. .+++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. .++.+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999995311 1479999999999999999999999999999999999999999999999998863 36789
Q ss_pred EEEeccccccc-HhHHHHHhcCC---CCC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHH
Q 000751 388 GLVTQEPALLS-LSIRDNIAYGR---DAT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIAR 459 (1303)
Q Consensus 388 ~~v~Q~~~l~~-~ti~~ni~~~~---~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialAR 459 (1303)
+||+|++.+|. .|++||+.++. ... .+++.++++..++.+++. ....+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFEN-----------AYPHQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------CCcccCCHHHHHHHHHHH
Confidence 99999999887 79999998753 111 234455555555544433 334579999999999999
Q ss_pred hhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEe--CceEeeccCh
Q 000751 460 AVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMD--EGRLFEMGTH 528 (1303)
Q Consensus 460 al~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~--~G~i~~~g~~ 528 (1303)
||+++|+++||||||++||+.+...+.+.|+++. .++|+|++||+++.+. .||+|++|+ +|++++.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999998873 3799999999999875 599999999 7999988764
No 406
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-39 Score=371.78 Aligned_cols=219 Identities=28% Similarity=0.487 Sum_probs=186.8
Q ss_pred ccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEECCeeCCCC--C
Q 000751 1052 GSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD-----PVAGQVLLDGRDLKLY--N 1124 (1303)
Q Consensus 1052 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~~--~ 1124 (1303)
..|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++... +
T Consensus 44 ~~l~i~nl~~~~~~~---~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGDD---HALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCCe---eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 369999999999753 59999999999999999999999999999999999986 6899999999998753 4
Q ss_pred HHHhhcceEEEccCCccCcccHHHHHHcCCCC-------------------CCHHHHHHHHHHhchHHHHHhCCCCcccc
Q 000751 1125 LRWLRNHLGLVQQEPIIFSTTIRENIIYARHN-------------------ASEAEVKEAARIANAHHFISSLPHGYDTH 1185 (1303)
Q Consensus 1125 ~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~-------------------~~~~ei~~al~~a~l~~~I~~lp~Gldt~ 1185 (1303)
...+|++++||||++.+|++|++||+.++... ..++++.++++.+++.+ ++++.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWD-------EVNDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCch-------hhhHH
Confidence 56788999999999999999999999875210 01234555666655533 33344
Q ss_pred cCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEE-EE
Q 000751 1186 VGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNI-VV 1263 (1303)
Q Consensus 1186 vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~I-iv 1263 (1303)
......+||||||||++|||||+++|+||||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+. .||+| ++
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~~i~~~~d~i~~~ 272 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQQAARISDQTAVF 272 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHHHHHHhcCEEEEE
Confidence 5566779999999999999999999999999999999999999999999998865 489999999999875 59997 56
Q ss_pred EeCCEEEEecChHHHhhc
Q 000751 1264 LNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1264 l~~G~Ive~Gt~~eLl~~ 1281 (1303)
|++|++++.|+++++.+.
T Consensus 273 l~~G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 273 LTGGELVEYDDTDKIFEN 290 (305)
T ss_pred ecCCEEEEeCCHHHHHhC
Confidence 799999999999999764
No 407
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=366.40 Aligned_cols=220 Identities=26% Similarity=0.416 Sum_probs=188.4
Q ss_pred cccEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-----CccEEEECCeeCC----
Q 000751 1051 YGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-----VAGQVLLDGRDLK---- 1121 (1303)
Q Consensus 1051 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~---- 1121 (1303)
.+.|+++|++++|++. ++|+|+||+|++||+++|+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 14 ~~~l~~~~l~~~~~~~---~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 14 QQKSEVNKLNFYYGGY---QALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CceEEEEEEEEEECCe---eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 3679999999999743 599999999999999999999999999999999999875 7999999998874
Q ss_pred CCCHHHhhcceEEEccCCccCcccHHHHHHcCCC--C-----CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCC
Q 000751 1122 LYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARH--N-----ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLT 1194 (1303)
Q Consensus 1122 ~~~~~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~-----~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1194 (1303)
..+...+|++++|+||+|.+|++|++||+.++.. . ..++++.++++.+++.+.+ ..........||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS 163 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEV-------KDRLGDLAFNLS 163 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhh-------hHHHhCCcccCC
Confidence 3345678899999999999999999999986521 1 1135566777777664333 233445566899
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEec
Q 000751 1195 PGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1195 gGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~G 1273 (1303)
||||||++||||++++|++|||||||++||+.+.+.+.+.|++... ++|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g 242 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQQAARVSDYTAYMYMGELIEFG 242 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 9999999999999999999999999999999999999999998755 589999999999885 59999999999999999
Q ss_pred ChHHHhhc
Q 000751 1274 THDSLLAK 1281 (1303)
Q Consensus 1274 t~~eLl~~ 1281 (1303)
+++++...
T Consensus 243 ~~~~~~~~ 250 (265)
T PRK14252 243 ATDTIFIK 250 (265)
T ss_pred CHHHHHhC
Confidence 99999754
No 408
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=366.18 Aligned_cols=217 Identities=26% Similarity=0.436 Sum_probs=186.7
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC-----CCCcEEEECCeecC--CCCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD-----PTLGEVLLDGENIK--NLKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~--~~~~ 380 (1303)
.|+++||+++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|++. |++|+|.++|.++. ..+.
T Consensus 10 ~l~i~~v~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYG---SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEEC---CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 489999999995 3469999999999999999999999999999999999986 47999999999885 3455
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCCC---CC---HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGRD---AT---LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIK 454 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~---~~---~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqr 454 (1303)
..++++|+||+|++.+|+.|++||+.++.. .. ++++.++++.+++.+++.. .....+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHHH
Confidence 677889999999999998899999998641 11 2344555666666544432 2455677899999999
Q ss_pred HHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEe---------CceEee
Q 000751 455 LSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMD---------EGRLFE 524 (1303)
Q Consensus 455 ialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~---------~G~i~~ 524 (1303)
++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|+ +|++++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 9999999999999999999999999999999999998877899999999999876 599999998 899999
Q ss_pred ccChHHHhhc
Q 000751 525 MGTHDELLAT 534 (1303)
Q Consensus 525 ~g~~~~l~~~ 534 (1303)
.|+++++.+.
T Consensus 240 ~~~~~~~~~~ 249 (264)
T PRK14243 240 FDRTEKIFNS 249 (264)
T ss_pred eCCHHHHHhC
Confidence 9999998754
No 409
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1e-39 Score=369.13 Aligned_cols=213 Identities=23% Similarity=0.352 Sum_probs=181.0
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHH---HHh
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLE---WLR 384 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~~ 384 (1303)
-|+++|++|+|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .++
T Consensus 7 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRG---NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 489999999995 35699999999999999999999999999999999999999999999999998876543 357
Q ss_pred cceEEEecccccccH-hHHHHHhcCC----CCCHH----HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHH
Q 000751 385 SQIGLVTQEPALLSL-SIRDNIAYGR----DATLD----QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKL 455 (1303)
Q Consensus 385 ~~i~~v~Q~~~l~~~-ti~~ni~~~~----~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqri 455 (1303)
++|+|++|++.+|.. |+.||+.++. ..+.+ ++.+.++..++ +.........||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGL-----------RGAAKLMPSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCC-----------hhhhhCChhhCCHHHHHHH
Confidence 789999999999875 9999998752 12222 23333343333 3233344568999999999
Q ss_pred HHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHh
Q 000751 456 SIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELL 532 (1303)
Q Consensus 456 alARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 532 (1303)
+|||||+++|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999988753 7999999999998865 9999999999999999999987
Q ss_pred hc
Q 000751 533 AT 534 (1303)
Q Consensus 533 ~~ 534 (1303)
+.
T Consensus 233 ~~ 234 (269)
T PRK11831 233 AN 234 (269)
T ss_pred cC
Confidence 64
No 410
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.7e-39 Score=366.66 Aligned_cols=223 Identities=26% Similarity=0.424 Sum_probs=184.7
Q ss_pred EEEEEEEEEcCCC------CCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHH
Q 000751 309 IEFRNVYFSYLSR------PEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW 382 (1303)
Q Consensus 309 i~~~~v~f~y~~~------~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~ 382 (1303)
|+++||+|+|++. +++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999631 1357999999999999999999999999999999999999999999999999998776543
Q ss_pred ---HhcceEEEecccc--cc-cHhHHHHHhcCC----CCCH----HHHHHHHHHhcchHHHHhcccccC-ccccCCCCCC
Q 000751 383 ---LRSQIGLVTQEPA--LL-SLSIRDNIAYGR----DATL----DQIEEAAKIAHAHTFISSLEKGYE-TQVGRAGLAL 447 (1303)
Q Consensus 383 ---~~~~i~~v~Q~~~--l~-~~ti~~ni~~~~----~~~~----~~~~~~~~~~~~~~~i~~l~~g~~-t~vg~~g~~L 447 (1303)
+|+.|+||+|++. ++ ..|++||+.++. .... +++.++++.. |++ ......+..|
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~~L 151 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMV-----------GLRSEDADKLPRQL 151 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCChhhhhCChhhC
Confidence 6778999999983 44 479999997542 1221 2233333333 343 2345567789
Q ss_pred ChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEee
Q 000751 448 TEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLFE 524 (1303)
Q Consensus 448 SgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~ 524 (1303)
|||||||++|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+. .||++++|++|++++
T Consensus 152 SgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 231 (265)
T TIGR02769 152 SGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVE 231 (265)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999988753 899999999999987 599999999999999
Q ss_pred ccChHHHhhc-ChhHHHHH
Q 000751 525 MGTHDELLAT-GDLYAELL 542 (1303)
Q Consensus 525 ~g~~~~l~~~-~~~~~~~~ 542 (1303)
.|+++++... ++.++.+.
T Consensus 232 ~g~~~~~~~~~~~~~~~~~ 250 (265)
T TIGR02769 232 ECDVAQLLSFKHPAGRNLQ 250 (265)
T ss_pred ECCHHHHcCCCCHHHHHHH
Confidence 9999999863 34454443
No 411
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=7.1e-40 Score=358.49 Aligned_cols=202 Identities=27% Similarity=0.492 Sum_probs=172.0
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
|+++|++++|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++++
T Consensus 1 i~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFG---NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEEC---CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 47899999995 34799999999999999999999999999999999999999999999999998765543 46899
Q ss_pred EEeccccccc-HhHHHHHhcCC---CCCHH----HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHh
Q 000751 389 LVTQEPALLS-LSIRDNIAYGR---DATLD----QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARA 460 (1303)
Q Consensus 389 ~v~Q~~~l~~-~ti~~ni~~~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARa 460 (1303)
||+|++.+|. .|++||+.++. ....+ ++.++++..++.+. .......||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHL-----------LDRKPKQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHH-----------HhCChhhCCHHHHHHHHHHHH
Confidence 9999999885 69999998762 12222 33444454444433 334456899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccc-cCEEEEEeCceEeecc
Q 000751 461 VLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMG 526 (1303)
Q Consensus 461 l~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g 526 (1303)
++++|+++||||||++||+++.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999998875 37999999999998765 9999999999999865
No 412
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=362.61 Aligned_cols=217 Identities=24% Similarity=0.350 Sum_probs=181.1
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHH-Hhcc
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW-LRSQ 386 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~~~~ 386 (1303)
-|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYG---KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeC---CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 489999999995 357999999999999999999999999999999999999999999999999998877644 6788
Q ss_pred eEEEeccccccc-HhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccC
Q 000751 387 IGLVTQEPALLS-LSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLN 464 (1303)
Q Consensus 387 i~~v~Q~~~l~~-~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~ 464 (1303)
++|++|++.+|. .|++||+.++. ..+.++..+.++ +.++.++.. +.........||||||||++||||++++
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~l~~~~~l-~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIK-----WVYELFPRL-HERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHH-----HHHHHHHHH-HHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 999999999987 59999999864 222222222211 122222211 1122345668999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhh
Q 000751 465 PSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 465 ~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
|+||||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999999999998874 5899999999998764 599999999999999999999864
No 413
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.3e-39 Score=365.71 Aligned_cols=212 Identities=26% Similarity=0.453 Sum_probs=180.9
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCC---------
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLK--------- 379 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~--------- 379 (1303)
|+++||+|+|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+++
T Consensus 1 i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFG---ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeC---CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 57899999995 347999999999999999999999999999999999999999999999999987543
Q ss_pred ----HHHHhcceEEEeccccccc-HhHHHHHhcCC----CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCC
Q 000751 380 ----LEWLRSQIGLVTQEPALLS-LSIRDNIAYGR----DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLA 446 (1303)
Q Consensus 380 ----~~~~~~~i~~v~Q~~~l~~-~ti~~ni~~~~----~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~ 446 (1303)
...+++.|+||+|++.+|. .|+.||+.++. .... +++.++++..+ ++.........
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVG-----------LADKADHMPAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------ChhHhhcChhh
Confidence 2467889999999998885 89999998752 1222 22333444443 33344455678
Q ss_pred CChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEe
Q 000751 447 LTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLF 523 (1303)
Q Consensus 447 LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~ 523 (1303)
||||||||++|||||+++|+++||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+. .||++++|++|+++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV 226 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999988753 799999999999985 59999999999999
Q ss_pred eccChHHHhhc
Q 000751 524 EMGTHDELLAT 534 (1303)
Q Consensus 524 ~~g~~~~l~~~ 534 (1303)
+.|+++++.+.
T Consensus 227 ~~g~~~~~~~~ 237 (252)
T TIGR03005 227 EQGKPDEIFRQ 237 (252)
T ss_pred EeCCHHHHhcC
Confidence 99999998654
No 414
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=7.1e-40 Score=362.74 Aligned_cols=211 Identities=28% Similarity=0.454 Sum_probs=173.7
Q ss_pred EEEEEEEEEcCCCC-CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCH---HHHh
Q 000751 309 IEFRNVYFSYLSRP-EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKL---EWLR 384 (1303)
Q Consensus 309 i~~~~v~f~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~~ 384 (1303)
|+++||+|+|++.. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 68999999995321 1269999999999999999999999999999999999999999999999999987763 5678
Q ss_pred cceEEEecccc--cc-cHhHHHHHhcCC-----CCCHHHHHHHHHHhcchHHHHhcccccC-ccccCCCCCCChHHHHHH
Q 000751 385 SQIGLVTQEPA--LL-SLSIRDNIAYGR-----DATLDQIEEAAKIAHAHTFISSLEKGYE-TQVGRAGLALTEEQKIKL 455 (1303)
Q Consensus 385 ~~i~~v~Q~~~--l~-~~ti~~ni~~~~-----~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~vg~~g~~LSgGqkqri 455 (1303)
++++|++|++. ++ ..|++||+.++. ...++...++. ++.++.+ |+. ........+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAV-----LLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHH-----HHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 89999999993 44 579999998642 11111111111 1223333 332 345566678999999999
Q ss_pred HHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEeecc
Q 000751 456 SIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMG 526 (1303)
Q Consensus 456 alARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g 526 (1303)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999988754 799999999999987 59999999999998764
No 415
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.6e-39 Score=362.88 Aligned_cols=220 Identities=22% Similarity=0.377 Sum_probs=183.7
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHH-Hhcce
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW-LRSQI 387 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~~~~i 387 (1303)
|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+..+
T Consensus 3 i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFD---GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 78999999995 346999999999999999999999999999999999999999999999999998777654 35679
Q ss_pred EEEecccccccH-hHHHHHhcCCCCCHH---HH---HHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHh
Q 000751 388 GLVTQEPALLSL-SIRDNIAYGRDATLD---QI---EEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARA 460 (1303)
Q Consensus 388 ~~v~Q~~~l~~~-ti~~ni~~~~~~~~~---~~---~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARa 460 (1303)
+|++|++.+|.+ |++||+.++...... .+ ........+.+.++.+ |++.........||||||||++||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 999999999975 999999886321000 00 0000111223334443 45555566677899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHhh
Q 000751 461 VLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 461 l~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
++.+|++|||||||++||+++.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 99999999999999999999999999999988778999999999999864 99999999999999999988864
No 416
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-40 Score=364.44 Aligned_cols=216 Identities=25% Similarity=0.383 Sum_probs=183.4
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHH-Hhcc
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW-LRSQ 386 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~~~~ 386 (1303)
.++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+... .|+.
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYK---GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 378999999995 347999999999999999999999999999999999999999999999999998777544 5788
Q ss_pred eEEEeccccccc-HhHHHHHhcCCC----CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhh
Q 000751 387 IGLVTQEPALLS-LSIRDNIAYGRD----ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAV 461 (1303)
Q Consensus 387 i~~v~Q~~~l~~-~ti~~ni~~~~~----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal 461 (1303)
|+||+|++.+|. .|++||+.++.. .+.++.+ ..+++.++.+ |++.........||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRE-----DRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHH-----HHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 999999999887 599999987531 2222111 1223344444 455555667789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhh
Q 000751 462 LLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 462 ~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
+++|++|||||||++||+.+.+.+.+.+..+. +++|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999999999999888765 4899999999998765 599999999999999999998865
No 417
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=3.8e-39 Score=362.88 Aligned_cols=227 Identities=23% Similarity=0.386 Sum_probs=184.4
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCee-----CCCCCHHH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRD-----LKLYNLRW 1127 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~d-----i~~~~~~~ 1127 (1303)
.|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~~---~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGPR---KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCCc---eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 48999999999743 59999999999999999999999999999999999999999999999998 87776654
Q ss_pred ----hhcceEEEccCCc--cCc-ccHHHHHHcCC---CCCCHHHHHHHHHHhchHHHHHhCCCCcc-cccCCCCCCCChH
Q 000751 1128 ----LRNHLGLVQQEPI--IFS-TTIRENIIYAR---HNASEAEVKEAARIANAHHFISSLPHGYD-THVGMRGVDLTPG 1196 (1303)
Q Consensus 1128 ----lR~~i~~VpQdp~--LF~-gTIreNl~~g~---~~~~~~ei~~al~~a~l~~~I~~lp~Gld-t~vge~G~~LSgG 1196 (1303)
+|+.++||||+|. ++. .|+.+|+.+.. ...+..++.+ ...++++.+ |++ +.....+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERV--EIDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHc--CCChhHHhCCCccCCHH
Confidence 3567999999984 343 58899986421 1111122211 124455554 332 3455667799999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecC
Q 000751 1197 QKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1197 QrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt 1274 (1303)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++...+ +.|+|+|||+++.+. .||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999886543 689999999999987 599999999999999999
Q ss_pred hHHHhhcC-chhHHHH
Q 000751 1275 HDSLLAKN-GLYVRLM 1289 (1303)
Q Consensus 1275 ~~eLl~~~-g~y~~l~ 1289 (1303)
++++.... ..|.+.+
T Consensus 236 ~~~~~~~~~~~~~~~~ 251 (258)
T PRK11701 236 TDQVLDDPQHPYTQLL 251 (258)
T ss_pred HHHHhcCCCCHHHHHH
Confidence 99998653 3454443
No 418
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-39 Score=369.63 Aligned_cols=218 Identities=28% Similarity=0.463 Sum_probs=180.9
Q ss_pred ccEEEEEEEEEcCCCC--CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCC----C-C
Q 000751 307 GNIEFRNVYFSYLSRP--EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKN----L-K 379 (1303)
Q Consensus 307 ~~i~~~~v~f~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~-~ 379 (1303)
+.|+++|++++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. . +
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 5699999999996321 1359999999999999999999999999999999999999999999999998852 2 3
Q ss_pred HHHHhcceEEEeccc--ccccHhHHHHHhcCC---CCCHHHHH----HHHHHhcchHHHHhcccccCccccCCCCCCChH
Q 000751 380 LEWLRSQIGLVTQEP--ALLSLSIRDNIAYGR---DATLDQIE----EAAKIAHAHTFISSLEKGYETQVGRAGLALTEE 450 (1303)
Q Consensus 380 ~~~~~~~i~~v~Q~~--~l~~~ti~~ni~~~~---~~~~~~~~----~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgG 450 (1303)
...+|+.|+||+|++ .+|..|++||+.++. ....++.. +.++..+ +|.+ ........||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~-------L~~~---~~~~~~~~LS~G 154 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQ-------LPED---YVKRSPFELSGG 154 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-------CChh---HhcCChhhCCHH
Confidence 566788999999998 467889999999863 22332222 2222222 2222 234566789999
Q ss_pred HHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccC
Q 000751 451 QKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGT 527 (1303)
Q Consensus 451 qkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~ 527 (1303)
||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+. .||+|++|++|++++.|+
T Consensus 155 q~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~ 234 (289)
T PRK13645 155 QKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGS 234 (289)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998875 3799999999999875 599999999999999999
Q ss_pred hHHHhhc
Q 000751 528 HDELLAT 534 (1303)
Q Consensus 528 ~~~l~~~ 534 (1303)
++++...
T Consensus 235 ~~~~~~~ 241 (289)
T PRK13645 235 PFEIFSN 241 (289)
T ss_pred HHHHhcC
Confidence 9888654
No 419
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.5e-40 Score=362.65 Aligned_cols=210 Identities=29% Similarity=0.452 Sum_probs=178.7
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHH-Hhcce
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW-LRSQI 387 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~~~~i 387 (1303)
|+++||+++|+ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYG---QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeC---CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 47899999995 347999999999999999999999999999999999999999999999999998877654 46789
Q ss_pred EEEecccccccH-hHHHHHhcCC-CC--CH-HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhc
Q 000751 388 GLVTQEPALLSL-SIRDNIAYGR-DA--TL-DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVL 462 (1303)
Q Consensus 388 ~~v~Q~~~l~~~-ti~~ni~~~~-~~--~~-~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~ 462 (1303)
+|++|++.+|.. |++||+.++. .. .. +...++++.. ++++.........||||||||++||||++
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~----------~~l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELF----------PVLKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHH----------HhHHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999999975 9999998764 21 11 1122222222 12233345566789999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHH
Q 000751 463 LNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 463 ~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 531 (1303)
++|+++||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999999988753 7999999999999875 999999999999999999887
No 420
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=8.9e-40 Score=358.02 Aligned_cols=200 Identities=28% Similarity=0.454 Sum_probs=172.4
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHH---HHhc
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLE---WLRS 385 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~~~ 385 (1303)
|+++|++++|++ +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.+++.. .+++
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 689999999952 35799999999999999999999999999999999999999999999999999877643 4678
Q ss_pred ceEEEeccccccc-HhHHHHHhcCC---CCC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHH
Q 000751 386 QIGLVTQEPALLS-LSIRDNIAYGR---DAT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSI 457 (1303)
Q Consensus 386 ~i~~v~Q~~~l~~-~ti~~ni~~~~---~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrial 457 (1303)
.++|++|++.+|. .|++||+.++. ... ++++.++++..++.+++... ...||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAF-----------PEQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHHHHH
Confidence 8999999999885 79999998752 112 24456666666665444333 34799999999999
Q ss_pred HHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccccc-cCEEEEEeCce
Q 000751 458 ARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIRN-ADYIAVMDEGR 521 (1303)
Q Consensus 458 ARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~~-~d~i~~l~~G~ 521 (1303)
||||+++|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999998874 58999999999999875 99999999985
No 421
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=369.10 Aligned_cols=218 Identities=26% Similarity=0.416 Sum_probs=183.7
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc-----CCccEEEECCeeCCCC--CH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD-----PVAGQVLLDGRDLKLY--NL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~~--~~ 1125 (1303)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +.
T Consensus 39 ~l~~~~l~~~~~~~---~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 39 HVVAKNFSIYYGEF---EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred EEEEeeeEEEECCE---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 58999999999642 49999999999999999999999999999999999864 4999999999998653 33
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCC--CC-C----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARH--NA-S----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
..+|++++||||+|.+|+.|++|||.++.. .. + ++++.++++..++.+.+. + ........||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~----~~~~~~~~LSgGq~ 188 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS---D----RLDKNALGLSGGQQ 188 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh---h----HhhCChhhCCHHHH
Confidence 467889999999999999999999987531 11 1 223455666665532221 1 22334568999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++|||||+++|++|||||||++||+++...+.+.|++... ++|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999998754 589999999999875 599999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+.++
T Consensus 268 ~~~~ 271 (286)
T PRK14275 268 LFTN 271 (286)
T ss_pred HHhC
Confidence 9875
No 422
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-39 Score=363.07 Aligned_cols=203 Identities=28% Similarity=0.373 Sum_probs=176.4
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.|+++|++++|+ +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+++.+
T Consensus 12 ~l~i~~l~~~~~---~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYG---ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEEC---CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 599999999995 357999999999999999999999999999999999999999999999998753 457789
Q ss_pred EEEeccccccc-HhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCC
Q 000751 388 GLVTQEPALLS-LSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNP 465 (1303)
Q Consensus 388 ~~v~Q~~~l~~-~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~ 465 (1303)
+|++|++.+|. .|++||+.++. ...++++.++++..++.+. ......+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADR-----------ANEWPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhH-----------hcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999886 79999999864 2224455666666655443 33445689999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChH
Q 000751 466 SILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHD 529 (1303)
Q Consensus 466 ~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~ 529 (1303)
++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+. .||+|++|++|++++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999998863 3799999999999875 59999999999999888754
No 423
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.5e-39 Score=363.25 Aligned_cols=216 Identities=27% Similarity=0.449 Sum_probs=181.2
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCC--------H
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLK--------L 380 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~--------~ 380 (1303)
++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+ .
T Consensus 4 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 4 IEVKNLVKKFH---GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred EEEeceEEEEC---CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 88999999995 346999999999999999999999999999999999999999999999999986542 3
Q ss_pred HHHhcceEEEeccccccc-HhHHHHHhcCC----CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHH
Q 000751 381 EWLRSQIGLVTQEPALLS-LSIRDNIAYGR----DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKL 455 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~-~ti~~ni~~~~----~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqri 455 (1303)
..+++.++||+|++.+|. .|++||+.++. ....++..+. +.+.++.+ |++........+||||||||+
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~Gq~qrv 153 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATAR-----ARELLAKV--GLAGKETSYPRRLSGGQQQRV 153 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CCcchhhCChhhCChHHHHHH
Confidence 457789999999998885 79999998742 1222221111 12233333 444444556778999999999
Q ss_pred HHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHhh
Q 000751 456 SIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 456 alARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 233 (250)
T PRK11264 154 AIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFA 233 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998875 48999999999999864 99999999999999999998865
Q ss_pred c
Q 000751 534 T 534 (1303)
Q Consensus 534 ~ 534 (1303)
.
T Consensus 234 ~ 234 (250)
T PRK11264 234 D 234 (250)
T ss_pred C
Confidence 4
No 424
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-39 Score=363.25 Aligned_cols=219 Identities=25% Similarity=0.384 Sum_probs=188.7
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-----CccEEEECCeeCCCC--CH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-----VAGQVLLDGRDLKLY--NL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~~--~~ 1125 (1303)
.+.+++.+++|.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|++||.++... ..
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 4789999999963 3599999999999999999999999999999999999986 799999999998653 44
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCCC-----CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARHN-----ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQR 1200 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~-----~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1200 (1303)
..+|++++||||+|.+|+.|++|||.++... ...+++.++++.+++.+.+.. ..++...+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHH
Confidence 5678899999999999999999999876321 123467778888877655432 2234566899999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEe--------CCEEEE
Q 000751 1201 IAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLN--------GGRIVE 1271 (1303)
Q Consensus 1201 laLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~--------~G~Ive 1271 (1303)
++||||++++|+||||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+. .||+|++|+ +|++++
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~-~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~ 236 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKK-DYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVE 236 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEE
Confidence 9999999999999999999999999999999999998754 589999999999875 599999996 899999
Q ss_pred ecChHHHhhcC
Q 000751 1272 EGTHDSLLAKN 1282 (1303)
Q Consensus 1272 ~Gt~~eLl~~~ 1282 (1303)
.|+++++++..
T Consensus 237 ~g~~~~~~~~~ 247 (261)
T PRK14263 237 MGPTAQIFQNP 247 (261)
T ss_pred eCCHHHHHhCC
Confidence 99999998653
No 425
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-39 Score=363.19 Aligned_cols=211 Identities=27% Similarity=0.392 Sum_probs=183.0
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
|+++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 3 l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLG---GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 78999999995 346999999999999999999999999999999999999999999999999998888777888999
Q ss_pred EEeccccc-ccHhHHHHHhcCC-CC--C----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHh
Q 000751 389 LVTQEPAL-LSLSIRDNIAYGR-DA--T----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARA 460 (1303)
Q Consensus 389 ~v~Q~~~l-~~~ti~~ni~~~~-~~--~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARa 460 (1303)
|++|++.+ +..|++||+.++. .. + ++++.++++..++.+ ........||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAH-----------LAGRDYPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHh-----------HhcCCcccCCHHHHHHHHHHHH
Confidence 99999987 5789999998863 11 1 223444555554433 2334456899999999999999
Q ss_pred hc------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 461 VL------LNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 461 l~------~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
|+ .+|++|||||||++||+.+...+.+.|+++. .++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999998875 4899999999999886 5999999999999999999887
Q ss_pred hh
Q 000751 532 LA 533 (1303)
Q Consensus 532 ~~ 533 (1303)
..
T Consensus 229 ~~ 230 (258)
T PRK13548 229 LT 230 (258)
T ss_pred hC
Confidence 65
No 426
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=9.7e-40 Score=356.90 Aligned_cols=200 Identities=36% Similarity=0.606 Sum_probs=170.5
Q ss_pred EEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEE
Q 000751 310 EFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGL 389 (1303)
Q Consensus 310 ~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 389 (1303)
+++|++++|++. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.|+|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 368999999531 2569999999999999999999999999999999999999999999999999988877788899999
Q ss_pred Eecccc--cccHhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHh
Q 000751 390 VTQEPA--LLSLSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARA 460 (1303)
Q Consensus 390 v~Q~~~--l~~~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARa 460 (1303)
++|++. ++..|++||+.++. ..+. +++.+.++..++.+ .+......||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEG-----------LRDRSPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHh-----------hhcCCcccCCHHHHHHHHHHHH
Confidence 999983 67889999998753 1222 23334444444433 3344556899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccccc-cCEEEEEeCce
Q 000751 461 VLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIRN-ADYIAVMDEGR 521 (1303)
Q Consensus 461 l~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~~-~d~i~~l~~G~ 521 (1303)
|+++|++|||||||++||+.+.+.+.+.|.++. +++|+|++||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999998875 48999999999999876 99999999985
No 427
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=366.28 Aligned_cols=216 Identities=25% Similarity=0.436 Sum_probs=182.9
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC-----CCCcEEEECCeecCCCC--HH
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD-----PTLGEVLLDGENIKNLK--LE 381 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~~--~~ 381 (1303)
-+++|++|+|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|++. |++|+|.++|.++...+ ..
T Consensus 6 ~~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYG---SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEEC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 46899999995 3579999999999999999999999999999999999986 47999999999886543 34
Q ss_pred HHhcceEEEecccccccHhHHHHHhcCC---CC--C----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 382 WLRSQIGLVTQEPALLSLSIRDNIAYGR---DA--T----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 382 ~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~--~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
.+|+.++||+|++.+|.+|++||+.++. +. . ++++.++++..++.+++ .+.+...+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEEL-------GDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhcChhhCCHHHH
Confidence 5788999999999999899999998752 11 1 12344455555544322 1234556778999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998877899999999999986 4999999999999999999988
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
...
T Consensus 236 ~~~ 238 (251)
T PRK14244 236 FKN 238 (251)
T ss_pred hcC
Confidence 654
No 428
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=364.48 Aligned_cols=217 Identities=28% Similarity=0.449 Sum_probs=185.4
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecCCC--CH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIKNL--KL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 380 (1303)
.|+++|++|+|+ ++++|+|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|+++... +.
T Consensus 6 ~i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYG---EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEEC---CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 489999999995 35799999999999999999999999999999999999763 489999999998765 45
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCCC---C-C----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGRD---A-T----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~---~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
...++.|+|++|++.+|+.|++||+.++.. . . ++++.++++..++.+. +.+..+..+..||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDE-------VKDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchh-------hHHHhhcChhhCCHHHH
Confidence 667889999999999998999999998631 1 1 1233444444444322 22345677789999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++||||++.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+.+++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 999999999999999999999999999999999999998877899999999999986 5999999999999999999988
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
...
T Consensus 236 ~~~ 238 (253)
T PRK14261 236 FEN 238 (253)
T ss_pred HhC
Confidence 653
No 429
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-39 Score=363.44 Aligned_cols=218 Identities=23% Similarity=0.423 Sum_probs=185.5
Q ss_pred ccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC--C---CCcEEEECCeecCCC--C
Q 000751 307 GNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD--P---TLGEVLLDGENIKNL--K 379 (1303)
Q Consensus 307 ~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~~--~ 379 (1303)
+.|+++|++|+|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++... +
T Consensus 3 ~~l~~~nl~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 3 NKVKLEQLNVHFG---KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred cEEEEEEEEEEeC---CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 4699999999995 3469999999999999999999999999999999999986 4 689999999998643 4
Q ss_pred HHHHhcceEEEeccccccc-HhHHHHHhcCC---C-CCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChH
Q 000751 380 LEWLRSQIGLVTQEPALLS-LSIRDNIAYGR---D-ATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEE 450 (1303)
Q Consensus 380 ~~~~~~~i~~v~Q~~~l~~-~ti~~ni~~~~---~-~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgG 450 (1303)
...+|+.|+||+|++.+|. .|++||+.++. . .+. +++.++++..++.+++.. .....+..||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKD-------RLKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcCcCCHH
Confidence 4567889999999999887 69999998752 1 122 234555556665443322 233456789999
Q ss_pred HHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChH
Q 000751 451 QKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHD 529 (1303)
Q Consensus 451 qkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~ 529 (1303)
||||++||||++.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999999877899999999999985 59999999999999999999
Q ss_pred HHhhc
Q 000751 530 ELLAT 534 (1303)
Q Consensus 530 ~l~~~ 534 (1303)
++...
T Consensus 233 ~~~~~ 237 (252)
T PRK14256 233 KIFTT 237 (252)
T ss_pred HHHhC
Confidence 98654
No 430
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.2e-39 Score=357.11 Aligned_cols=201 Identities=26% Similarity=0.450 Sum_probs=171.6
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCH---HHHhc
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKL---EWLRS 385 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~~~ 385 (1303)
++++|++++|++ .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+. ...|+
T Consensus 1 l~~~~l~~~~~~--~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPN--GTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCC--CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 478999999953 2469999999999999999999999999999999999999999999999999987654 34678
Q ss_pred ceEEEeccccccc-HhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHH
Q 000751 386 QIGLVTQEPALLS-LSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSI 457 (1303)
Q Consensus 386 ~i~~v~Q~~~l~~-~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrial 457 (1303)
.|+||+|++.+|. .|++||+.++. ..+. +++.++++..++.+... ....+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHR-----------ALPAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-----------CChhhcCHHHHHHHHH
Confidence 8999999999887 59999998753 1222 23455555555544333 3345899999999999
Q ss_pred HHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccccc-cCEEEEEeCceE
Q 000751 458 ARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIRN-ADYIAVMDEGRL 522 (1303)
Q Consensus 458 ARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~~-~d~i~~l~~G~i 522 (1303)
|||++++|+++||||||++||+++.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999998874 58999999999999875 999999999974
No 431
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-39 Score=365.94 Aligned_cols=217 Identities=26% Similarity=0.397 Sum_probs=184.2
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC-----CCCcEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD-----PTLGEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 380 (1303)
.++++|++|+|+ +.++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 24 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYG---EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEEC---CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 599999999995 3469999999999999999999999999999999999987 699999999999853 345
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCC---CCCHH-----HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGR---DATLD-----QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~~~~-----~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
..+++.|+|++|++.+|..|++||+.++. ..+++ ++.++++..++.+ ++.......+..||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWD-------ELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-------hHHHHHhcCcccCCHHHH
Confidence 66788999999999999899999998753 22211 1233333333222 222334567789999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998877899999999999976 5999999999999999999998
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
...
T Consensus 254 ~~~ 256 (271)
T PRK14238 254 FSN 256 (271)
T ss_pred HcC
Confidence 654
No 432
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-39 Score=361.69 Aligned_cols=225 Identities=24% Similarity=0.426 Sum_probs=187.1
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECC------eeCCCCCHH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDG------RDLKLYNLR 1126 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG------~di~~~~~~ 1126 (1303)
.|+++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| .++.+++..
T Consensus 10 ~i~~~~~~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 10 VFNISRLYLYINDK---AILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred heeeeeEEEecCCc---eeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 58999999999743 499999999999999999999999999999999999999987666655 677777778
Q ss_pred HhhcceEEEccCCccCcc-cHHHHHHcCCC--CC-CHHH----HHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1127 WLRNHLGLVQQEPIIFST-TIRENIIYARH--NA-SEAE----VKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1127 ~lR~~i~~VpQdp~LF~g-TIreNl~~g~~--~~-~~~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
.+|++++|+||+|.+|++ |++||+.++.. .. ++++ +.++++..++++++. .........||||||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVY-------DRLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccch-------hhhcCCcccCCHHHH
Confidence 889999999999999976 99999986532 11 2223 345555555543221 122345568999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhH-hhcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMM-RHVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti-~~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++||||++++|+++||||||++||..+++.+.+.|.+... ++|+|++||+++.+ ..||++++|++|++++.|++++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~ 238 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNE 238 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999998754 59999999999988 5699999999999999999999
Q ss_pred HhhcC-chhHHH
Q 000751 1278 LLAKN-GLYVRL 1288 (1303)
Q Consensus 1278 Ll~~~-g~y~~l 1288 (1303)
+.+.. ..|.+.
T Consensus 239 ~~~~~~~~~~~~ 250 (257)
T PRK14246 239 IFTSPKNELTEK 250 (257)
T ss_pred HHhCCCcHHHHH
Confidence 98753 345443
No 433
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-39 Score=366.88 Aligned_cols=212 Identities=28% Similarity=0.471 Sum_probs=180.3
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecC--CCCHHHHhcc
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIK--NLKLEWLRSQ 386 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~--~~~~~~~~~~ 386 (1303)
|+++||+++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++. +.+...+|++
T Consensus 2 l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQ---DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcC---CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 68999999995 346999999999999999999999999999999999999999999999999985 3345567889
Q ss_pred eEEEecccc--cccHhHHHHHhcCC---CCCHH----HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHH
Q 000751 387 IGLVTQEPA--LLSLSIRDNIAYGR---DATLD----QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSI 457 (1303)
Q Consensus 387 i~~v~Q~~~--l~~~ti~~ni~~~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrial 457 (1303)
|+||+|++. ++..|+.+|+.++. ..+.+ ++.++++..++.++. ......||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFR-----------HQPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHh-----------cCCchhCCHHHHHHHHH
Confidence 999999985 56789999998752 22332 233445555543332 23456899999999999
Q ss_pred HHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhc
Q 000751 458 ARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 458 ARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
||||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+. .||++++|++|++++.|+++++...
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998874 5899999999999985 5999999999999999999888654
No 434
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.6e-39 Score=342.77 Aligned_cols=172 Identities=38% Similarity=0.604 Sum_probs=161.7
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
|+++|++++|++ .+.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...++++++
T Consensus 1 i~~~~l~~~~~~-~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPG-AEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCC-CCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 478999999963 2346999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEecccccccHhHHHHHhcCCCCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCCEE
Q 000751 389 LVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSIL 468 (1303)
Q Consensus 389 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~il 468 (1303)
|++|++.+|..|++||+ ||||||||++||||++.+|++|
T Consensus 80 ~~~q~~~~~~~tv~~~l-----------------------------------------LS~G~~qrv~la~al~~~p~~l 118 (173)
T cd03246 80 YLPQDDELFSGSIAENI-----------------------------------------LSGGQRQRLGLARALYGNPRIL 118 (173)
T ss_pred EECCCCccccCcHHHHC-----------------------------------------cCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999998 9999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccccccCEEEEEeCceE
Q 000751 469 LLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIRNADYIAVMDEGRL 522 (1303)
Q Consensus 469 ilDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~~~d~i~~l~~G~i 522 (1303)
||||||++||+.+...+.+.++++. +++|+|++||+++.+..||++++|++|++
T Consensus 119 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 119 VLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 9999999999999999999998875 48899999999999888999999999974
No 435
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=362.75 Aligned_cols=217 Identities=29% Similarity=0.456 Sum_probs=185.9
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecCCC--CH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIKNL--KL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 380 (1303)
.|+++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYG---EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEEC---CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 489999999995 34699999999999999999999999999999999999875 799999999998643 34
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCC---CC-CH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGR---DA-TL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
...++.++||+|++.+|..|++||+.++. .. +. +++.++++.+++.+.+. .........||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVK-------DDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHHH
Confidence 56788999999999999999999999763 11 22 23455666665543332 223456678999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++||||++++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+.+++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999998765 999999999999999999998
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
...
T Consensus 234 ~~~ 236 (251)
T PRK14270 234 FLE 236 (251)
T ss_pred hcC
Confidence 654
No 436
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-39 Score=362.76 Aligned_cols=216 Identities=27% Similarity=0.465 Sum_probs=185.1
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecC-CCCHH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIK-NLKLE 381 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~-~~~~~ 381 (1303)
.++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++. ..+..
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYG---ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEEC---CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 488999999995 35799999999999999999999999999999999999986 5999999999985 44566
Q ss_pred HHhcceEEEecccccccHhHHHHHhcCC---CCC-H----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHH
Q 000751 382 WLRSQIGLVTQEPALLSLSIRDNIAYGR---DAT-L----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKI 453 (1303)
Q Consensus 382 ~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~~-~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkq 453 (1303)
.+|+.++||+|++.+|..|++||+.++. ... + +++.++++..++.+.+. +........|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHH
Confidence 7888999999999999999999998763 111 1 23344455555543332 3345566789999999
Q ss_pred HHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHh
Q 000751 454 KLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELL 532 (1303)
Q Consensus 454 rialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 532 (1303)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998778999999999999775 9999999999999999988875
Q ss_pred h
Q 000751 533 A 533 (1303)
Q Consensus 533 ~ 533 (1303)
.
T Consensus 233 ~ 233 (249)
T PRK14253 233 S 233 (249)
T ss_pred c
Confidence 4
No 437
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2e-39 Score=365.01 Aligned_cols=214 Identities=23% Similarity=0.429 Sum_probs=181.9
Q ss_pred ccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCC--------
Q 000751 307 GNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNL-------- 378 (1303)
Q Consensus 307 ~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~-------- 378 (1303)
+.++++|++|+|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++...
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYG---EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 4699999999995 34699999999999999999999999999999999999999999999999988642
Q ss_pred -----CHHHHhcceEEEeccccccc-HhHHHHHhcCC----CCCH----HHHHHHHHHhcchHHHHhcccccCccc-cCC
Q 000751 379 -----KLEWLRSQIGLVTQEPALLS-LSIRDNIAYGR----DATL----DQIEEAAKIAHAHTFISSLEKGYETQV-GRA 443 (1303)
Q Consensus 379 -----~~~~~~~~i~~v~Q~~~l~~-~ti~~ni~~~~----~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~v-g~~ 443 (1303)
....+++.|+||+|++.+|. .|++||+.++. .... +++.++++..++ .... ...
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~ 149 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGI-----------DERAQGKY 149 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC-----------ChhhhhCC
Confidence 13466789999999999996 59999998642 1222 223333444333 3322 455
Q ss_pred CCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccccc-cCEEEEEeCce
Q 000751 444 GLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIRN-ADYIAVMDEGR 521 (1303)
Q Consensus 444 g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~~-~d~i~~l~~G~ 521 (1303)
...||||||||++|||||+++|+++||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|+
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~ 229 (257)
T PRK10619 150 PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGK 229 (257)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 67899999999999999999999999999999999999999999998875 48999999999999875 99999999999
Q ss_pred EeeccChHHHhhc
Q 000751 522 LFEMGTHDELLAT 534 (1303)
Q Consensus 522 i~~~g~~~~l~~~ 534 (1303)
+++.|+++++...
T Consensus 230 i~~~~~~~~~~~~ 242 (257)
T PRK10619 230 IEEEGAPEQLFGN 242 (257)
T ss_pred EEEeCCHHHhhhC
Confidence 9999999988654
No 438
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.6e-39 Score=371.74 Aligned_cols=211 Identities=26% Similarity=0.396 Sum_probs=178.6
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.|+++|++++|+ +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++... ....|++|
T Consensus 4 ~i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYG---DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeC---CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 489999999995 34699999999999999999999999999999999999999999999999998654 35678899
Q ss_pred EEEeccccccc-HhHHHHHhcC-C--CCCHHHH----HHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHH
Q 000751 388 GLVTQEPALLS-LSIRDNIAYG-R--DATLDQI----EEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIAR 459 (1303)
Q Consensus 388 ~~v~Q~~~l~~-~ti~~ni~~~-~--~~~~~~~----~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialAR 459 (1303)
+||+|++.++. .|++||+.+. . ..+.++. .++++..++ ++..+ .....||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l-------~~~~~----~~~~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARL-------ESKAD----VRVALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCC-------hhHhc----CchhhCCHHHHHHHHHHH
Confidence 99999998884 7999999753 2 2333322 223333332 22223 344579999999999999
Q ss_pred hhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhh
Q 000751 460 AVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 460 al~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999998874 5899999999999986 599999999999999999998864
No 439
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-39 Score=362.23 Aligned_cols=218 Identities=28% Similarity=0.444 Sum_probs=183.7
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc--C---CccEEEECCeeCCC--CCH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD--P---VAGQVLLDGRDLKL--YNL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~--~---~~G~I~idG~di~~--~~~ 1125 (1303)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999974 259999999999999999999999999999999999975 4 58999999999864 345
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCC--CC-C----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARH--NA-S----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1198 (1303)
..+|++++|+||+|.+|+.|+++|+.++.. .. . ++++.++++.+++.+.+ .........+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEV-------KDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccch-------hhHHhcCcccCCHHHH
Confidence 577889999999999999999999986421 11 1 23345555665554322 1223344568999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHH
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1199 QRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
||++||||++++|+||||||||++||+.+.+.+.+.|++... ++|+|+|||+++.+. .||+|++|++|++++.|++.+
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQ 233 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999998755 489999999999885 599999999999999999999
Q ss_pred Hhhc
Q 000751 1278 LLAK 1281 (1303)
Q Consensus 1278 Ll~~ 1281 (1303)
+...
T Consensus 234 ~~~~ 237 (252)
T PRK14255 234 MFLN 237 (252)
T ss_pred HhcC
Confidence 8765
No 440
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-39 Score=361.24 Aligned_cols=216 Identities=25% Similarity=0.415 Sum_probs=179.3
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecC------CCCHH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIK------NLKLE 381 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~------~~~~~ 381 (1303)
.++++|++|+|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+..
T Consensus 2 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T PRK11124 2 SIQLNGINCFYG---AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred EEEEEeeEEEEC---CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHH
Confidence 378999999995 346999999999999999999999999999999999999999999999999873 12345
Q ss_pred HHhcceEEEeccccccc-HhHHHHHhcCC----CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHH
Q 000751 382 WLRSQIGLVTQEPALLS-LSIRDNIAYGR----DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLS 456 (1303)
Q Consensus 382 ~~~~~i~~v~Q~~~l~~-~ti~~ni~~~~----~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqria 456 (1303)
.+|++|+|++|++.+|. .|++||+.++. ....++..+ .+.+.++.+ |++..+.....+||||||||++
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~ 151 (242)
T PRK11124 79 ELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALA-----RAEKLLERL--RLKPYADRFPLHLSGGQQQRVA 151 (242)
T ss_pred HHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHH
Confidence 67889999999999886 59999997531 122222111 122233333 4444445556789999999999
Q ss_pred HHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhh
Q 000751 457 IARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 457 lARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
||||++++|+++||||||++||+++...+.+.|+++. +++|+|++||+++.+. .||++++|++|++++.|+++++.+
T Consensus 152 laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 152 IARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 9999999999999999999999999999999998875 4899999999999986 499999999999999999888654
No 441
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-39 Score=366.10 Aligned_cols=217 Identities=26% Similarity=0.412 Sum_probs=185.6
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecCCCC-HH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIKNLK-LE 381 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~-~~ 381 (1303)
.++++||+|+|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.+.+ ..
T Consensus 21 ~l~i~nl~~~~~---~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFA---GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEEC---CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 589999999995 35799999999999999999999999999999999999986 6999999999987653 45
Q ss_pred HHhcceEEEecccccccHhHHHHHhcCC----CCCHHHHH----HHHHHhcchHHHHhcccccCccccCCCCCCChHHHH
Q 000751 382 WLRSQIGLVTQEPALLSLSIRDNIAYGR----DATLDQIE----EAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKI 453 (1303)
Q Consensus 382 ~~~~~i~~v~Q~~~l~~~ti~~ni~~~~----~~~~~~~~----~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkq 453 (1303)
.+++.|+||+|++.+|..|++||+.++. ..+++++. +.++.+++.+ .+++.+.....+|||||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~l~~~~~~LSgGq~q 170 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWD-------AVKDRLSDSPFRLSGGQQQ 170 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCc-------hhhhHhhCCcccCCHHHHH
Confidence 6788999999999999999999999763 13444333 2233333322 2223455677899999999
Q ss_pred HHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHh
Q 000751 454 KLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELL 532 (1303)
Q Consensus 454 rialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 532 (1303)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++.
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999998876799999999999876 59999999999999999999987
Q ss_pred hc
Q 000751 533 AT 534 (1303)
Q Consensus 533 ~~ 534 (1303)
+.
T Consensus 251 ~~ 252 (276)
T PRK14271 251 SS 252 (276)
T ss_pred hC
Confidence 64
No 442
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5e-39 Score=332.78 Aligned_cols=223 Identities=28% Similarity=0.435 Sum_probs=188.1
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHh-hcc
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWL-RNH 1131 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~l-R~~ 1131 (1303)
-++++|++..|.. ..+|++|||++++||+++++||||+||||++++|+|+.++.+|+|.++|.||+..+++.. |.-
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 3789999999964 359999999999999999999999999999999999999999999999999999988755 778
Q ss_pred eEEEccCCccCc-ccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcC
Q 000751 1132 LGLVQQEPIIFS-TTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKN 1210 (1303)
Q Consensus 1132 i~~VpQdp~LF~-gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~ 1210 (1303)
|+||||...+|+ -||.|||.+|.....+++-++. .+++..+-+| -+......++.+|||||+|-+||||||..+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~----~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQER----DLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhcccccccccc----cHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 999999999997 5999999987432222111110 1222223334 355555667789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchh-HhhcCEEEEEeCCEEEEecChHHHhhcCc
Q 000751 1211 APILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAM-MRHVDNIVVLNGGRIVEEGTHDSLLAKNG 1283 (1303)
Q Consensus 1211 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~t-i~~~D~Iivl~~G~Ive~Gt~~eLl~~~g 1283 (1303)
|++|+|||||.+|-|.--+.|.++|+++.++ +.||++|-++... ++-+||.+||++|+|+.+|+.+||.++..
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~~ 229 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADPD 229 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCHH
Confidence 9999999999999999999999999998644 4699999999985 56799999999999999999999998743
No 443
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-39 Score=362.98 Aligned_cols=218 Identities=29% Similarity=0.441 Sum_probs=186.6
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC-----CccEEEECCeeCCC--CCH
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP-----VAGQVLLDGRDLKL--YNL 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~--~~~ 1125 (1303)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++| .+|+|.+||.++.. .+.
T Consensus 20 ~l~~~nl~~~~~~~---~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 20 VFEVEGVKVFYGGF---LALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred eEEEeeEEEEeCCe---EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 69999999999742 599999999999999999999999999999999999864 58999999999864 344
Q ss_pred HHhhcceEEEccCCccCcccHHHHHHcCCCC-----CCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHH
Q 000751 1126 RWLRNHLGLVQQEPIIFSTTIRENIIYARHN-----ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQR 1200 (1303)
Q Consensus 1126 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~-----~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1200 (1303)
..+|++++|+||++.+|+.|++|||.++... ..++++.++++.+++.+.+.. ........||||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD-------KLKEKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH-------HhcCCcccCCHHHHHH
Confidence 5678999999999999999999999875321 123445667777776554432 2234456899999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEe---------CCEEE
Q 000751 1201 IAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLN---------GGRIV 1270 (1303)
Q Consensus 1201 laLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~---------~G~Iv 1270 (1303)
++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+. .||+|++|+ +|+++
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~ 248 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV 248 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 9999999999999999999999999999999999998765 589999999999875 699999997 89999
Q ss_pred EecChHHHhhc
Q 000751 1271 EEGTHDSLLAK 1281 (1303)
Q Consensus 1271 e~Gt~~eLl~~ 1281 (1303)
+.|+++++...
T Consensus 249 ~~g~~~~~~~~ 259 (274)
T PRK14265 249 EFSPTEQMFGS 259 (274)
T ss_pred EeCCHHHHHhC
Confidence 99999999765
No 444
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.1e-39 Score=356.94 Aligned_cols=197 Identities=26% Similarity=0.426 Sum_probs=167.0
Q ss_pred EEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceEE
Q 000751 310 EFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGL 389 (1303)
Q Consensus 310 ~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 389 (1303)
+++|++++|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .++++|+|
T Consensus 1 ~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYG---GHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEEC---CEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 3689999995 246999999999999999999999999999999999999999999999998764 46778999
Q ss_pred Eeccccc---ccHhHHHHHhcCCCC-----------CHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHH
Q 000751 390 VTQEPAL---LSLSIRDNIAYGRDA-----------TLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKL 455 (1303)
Q Consensus 390 v~Q~~~l---~~~ti~~ni~~~~~~-----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqri 455 (1303)
|+|++.+ ++.|++||+.++... .++++.++++..++.++.. ....+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELAD-----------RQIGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHh-----------CCcccCCHHHHHHH
Confidence 9999976 568999999876421 1234555666666554433 33457999999999
Q ss_pred HHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccccc-cCEEEEEeCceEeecc
Q 000751 456 SIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMG 526 (1303)
Q Consensus 456 alARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g 526 (1303)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999999998875 68999999999999864 9999999886 55544
No 445
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=363.85 Aligned_cols=217 Identities=28% Similarity=0.460 Sum_probs=185.0
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecCCC--CH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIKNL--KL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 380 (1303)
-|+++|++|+|+ +.++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYG---EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeC---CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 489999999995 35799999999999999999999999999999999999984 899999999988653 34
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCC---CC-C----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGR---DA-T----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
..+++.++|++|++.+|..|++||+.++. .. . ++++.++++..++.+.+. +.......+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVK-------SELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhH-------HHHhCChhhcCHHHH
Confidence 56788999999999999999999998753 11 1 123445555555543332 234566778999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++||||++++|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999999999999998877899999999999765 5999999999999999999988
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
.+.
T Consensus 233 ~~~ 235 (250)
T PRK14262 233 VER 235 (250)
T ss_pred HhC
Confidence 654
No 446
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-39 Score=335.15 Aligned_cols=221 Identities=28% Similarity=0.418 Sum_probs=189.3
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHH-Hhcc
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW-LRSQ 386 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~~~~ 386 (1303)
-++++|++-.|. ...+|++|||++++||+++++|+||+|||||++.|+|+.+|.+|+|.++|.|+...++.. .|..
T Consensus 3 mL~v~~l~~~YG---~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYG---KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeeccc---ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 378999999994 468999999999999999999999999999999999999999999999999999997755 5778
Q ss_pred eEEEeccccccc-HhHHHHHhcCCCCCHH-HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccC
Q 000751 387 IGLVTQEPALLS-LSIRDNIAYGRDATLD-QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLN 464 (1303)
Q Consensus 387 i~~v~Q~~~l~~-~ti~~ni~~~~~~~~~-~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~ 464 (1303)
|+||||.-.+|. .||+||+.+|.....+ +.. ...+++-.+-+| -+......++.+|||||+|-+||||||..+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~----~~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQ----ERDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhcccccccc----cccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 999999999995 7999999998522111 111 111222333445 355667788999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccc-cccCEEEEEeCceEeeccChHHHhhcCh
Q 000751 465 PSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLI-RNADYIAVMDEGRLFEMGTHDELLATGD 536 (1303)
Q Consensus 465 ~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 536 (1303)
|++|+|||||.+|-|.-.+.|.+.|+++.+ +.||++|-++.... +.|||.+||++|+|+.+|+.+||.++..
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~~ 229 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADPD 229 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCHH
Confidence 999999999999999999999999999874 66999999999875 5699999999999999999999987643
No 447
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=4e-39 Score=354.86 Aligned_cols=206 Identities=22% Similarity=0.395 Sum_probs=178.9
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
++++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++.... ++.++
T Consensus 1 l~l~~v~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~ 73 (223)
T TIGR03740 1 LETKNLSKRFGKQ---TAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIG 73 (223)
T ss_pred CEEEeEEEEECCE---EEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEE
Confidence 4789999999742 5999999999999999999999999999999999999999999999999876422 35799
Q ss_pred EEccCCccCc-ccHHHHHHcCCC--CCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcC
Q 000751 1134 LVQQEPIIFS-TTIRENIIYARH--NASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKN 1210 (1303)
Q Consensus 1134 ~VpQdp~LF~-gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~ 1210 (1303)
|+||++.+|. .|++||+.++.. ..+++++.++++..++.+..... ..+||||||||++||||++++
T Consensus 74 ~~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~~rv~laral~~~ 142 (223)
T TIGR03740 74 SLIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGKKK-----------AKQFSLGMKQRLGIAIALLNH 142 (223)
T ss_pred EEcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHhhh-----------HhhCCHHHHHHHHHHHHHhcC
Confidence 9999998886 699999975421 23456778888888776554332 347999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHH
Q 000751 1211 APILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDS 1277 (1303)
Q Consensus 1211 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~e 1277 (1303)
|++|||||||++||+.+.+.+.+.|++...+++|+|++||+++.+. .||+|++|++|++++.|++.+
T Consensus 143 p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 143 PKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999999999999999987554689999999999875 699999999999999999875
No 448
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-39 Score=366.39 Aligned_cols=213 Identities=31% Similarity=0.497 Sum_probs=181.5
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCC--CCHHHHhcc
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKN--LKLEWLRSQ 386 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~ 386 (1303)
|+++|++++|++ ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .+...+++.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 689999999952 3469999999999999999999999999999999999999999999999999852 234567889
Q ss_pred eEEEeccc--ccccHhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHH
Q 000751 387 IGLVTQEP--ALLSLSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSI 457 (1303)
Q Consensus 387 i~~v~Q~~--~l~~~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrial 457 (1303)
|+|++|++ .+|..|++||+.++. ..+. +++.++++.+++.++ .......||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGF-----------ENKPPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchh-----------hcCChhhCCHHHHHHHHH
Confidence 99999997 578889999998763 1222 234445555554322 223355899999999999
Q ss_pred HHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhc
Q 000751 458 ARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 458 ARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
|||++.+|++|||||||++||+.+...+.+.+.++. +++|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998875 4899999999999886 5999999999999999999988654
No 449
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.7e-39 Score=370.88 Aligned_cols=211 Identities=19% Similarity=0.356 Sum_probs=182.9
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
++++|++++|+ +..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +...+++.+|
T Consensus 3 l~~~~l~~~~~---~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYG---TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEEC---CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 78999999994 3569999999999999999999999999999999999999999999999999876 3456788999
Q ss_pred EEeccccccc-HhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHh
Q 000751 389 LVTQEPALLS-LSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARA 460 (1303)
Q Consensus 389 ~v~Q~~~l~~-~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARa 460 (1303)
|+||++.++. .|++||+.+.. .... +++.++++.. |++.........||||||||++||||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELV-----------GLRPEQHKKIGQLSKGYRQRVGLAQA 147 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHC-----------CCchHhcCchhhCCHHHHHHHHHHHH
Confidence 9999999986 49999998642 1222 2233333333 44444555667899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHhhc
Q 000751 461 VLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 461 l~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
|+.+|++|||||||++||+.+.+.+.+.++++.+++|+|++||+++.+.. ||+|++|++|+++..|+.+++.+.
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999998878999999999998865 999999999999999999998653
No 450
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-39 Score=352.55 Aligned_cols=200 Identities=24% Similarity=0.390 Sum_probs=172.6
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
|+++|++++|++ .. .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGE---QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCC---Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 578999999952 22 39999999999999999999999999999999999999999999999977654 357899
Q ss_pred EEeccccccc-HhHHHHHhcCCC-------CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHh
Q 000751 389 LVTQEPALLS-LSIRDNIAYGRD-------ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARA 460 (1303)
Q Consensus 389 ~v~Q~~~l~~-~ti~~ni~~~~~-------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARa 460 (1303)
|++|++.+|. .|++||+.++.. .+++++.++++..++.+.....| ..||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 9999999986 599999987632 12345667777777665554443 4799999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccc-cCEEEEEeCceEeecc
Q 000751 461 VLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMG 526 (1303)
Q Consensus 461 l~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g 526 (1303)
++++|++|||||||++||+++...+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999998875 38999999999999865 9999999999998754
No 451
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-39 Score=365.75 Aligned_cols=218 Identities=28% Similarity=0.458 Sum_probs=185.1
Q ss_pred ccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC-----CCCcEEEECCeecCC--CC
Q 000751 307 GNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD-----PTLGEVLLDGENIKN--LK 379 (1303)
Q Consensus 307 ~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~ 379 (1303)
..|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.+ .+
T Consensus 38 ~~l~i~~l~~~~~---~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYG---DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEEC---CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 3589999999995 3469999999999999999999999999999999999997 689999999999864 34
Q ss_pred HHHHhcceEEEecccccccHhHHHHHhcCC---CC---CHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHH
Q 000751 380 LEWLRSQIGLVTQEPALLSLSIRDNIAYGR---DA---TLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKI 453 (1303)
Q Consensus 380 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~---~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkq 453 (1303)
...+++.++||+|++.+|..|++||+.++. .. .++++.++++..++...+. .........|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVK-------DQLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhH-------HHHhCCcccCCHHHHH
Confidence 566788999999999999889999998752 11 1334555666655543332 1234566789999999
Q ss_pred HHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccc-cCEEE-EEeCceEeeccChHHH
Q 000751 454 KLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRN-ADYIA-VMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 454 rialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~-~d~i~-~l~~G~i~~~g~~~~l 531 (1303)
|++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998777899999999999865 99975 5799999999999888
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
.+.
T Consensus 268 ~~~ 270 (285)
T PRK14254 268 FEN 270 (285)
T ss_pred HhC
Confidence 653
No 452
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=347.17 Aligned_cols=225 Identities=29% Similarity=0.488 Sum_probs=193.6
Q ss_pred cEEEEEEEEEcCCCC---------------------CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCc
Q 000751 308 NIEFRNVYFSYLSRP---------------------EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLG 366 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~---------------------~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 366 (1303)
.|+++||++-|..++ ..--++|+||+|+.||+..|.|-||||||||++++.|+++|+.|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 588888888875321 11248899999999999999999999999999999999999999
Q ss_pred EEEECCeecCCCCHHHHh----cceEEEecccccc-cHhHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHHhccc
Q 000751 367 EVLLDGENIKNLKLEWLR----SQIGLVTQEPALL-SLSIRDNIAYGRD---AT----LDQIEEAAKIAHAHTFISSLEK 434 (1303)
Q Consensus 367 ~i~~~g~~~~~~~~~~~~----~~i~~v~Q~~~l~-~~ti~~ni~~~~~---~~----~~~~~~~~~~~~~~~~i~~l~~ 434 (1303)
+|+++|.|+..++.+.|| +++++|+|+.-|| +-||.||..||.+ .. +++..++++.++|+.|-.+.|+
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~ 163 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPN 163 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcc
Confidence 999999999999988875 5799999999988 5899999999952 22 3446677788888888777765
Q ss_pred ccCccccCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcc-cccc
Q 000751 435 GYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSL-IRNA 511 (1303)
Q Consensus 435 g~~t~vg~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~-~~~~ 511 (1303)
.||||+|||+.|||||..+|+||++|||+|||||--...+++.|.++. -+||+|+|||+++. ++-.
T Consensus 164 -----------eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 164 -----------ELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred -----------cccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 699999999999999999999999999999999999999998887664 37999999999987 5679
Q ss_pred CEEEEEeCceEeeccChHHHhhcCh--hHHHHHH
Q 000751 512 DYIAVMDEGRLFEMGTHDELLATGD--LYAELLK 543 (1303)
Q Consensus 512 d~i~~l~~G~i~~~g~~~~l~~~~~--~~~~~~~ 543 (1303)
|||..|++|+|+..|+++|++.+.. +-+++++
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~~Fv~ 266 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYVRDFVR 266 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHHHHHHh
Confidence 9999999999999999999988743 3344443
No 453
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=5e-39 Score=376.06 Aligned_cols=209 Identities=26% Similarity=0.399 Sum_probs=178.2
Q ss_pred eeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCC----HHHhhcceE
Q 000751 1058 NVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYN----LRWLRNHLG 1133 (1303)
Q Consensus 1058 ~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~----~~~lR~~i~ 1133 (1303)
|++++|++. .+ |+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++...+ ...+|++++
T Consensus 4 ~l~~~~~~~----~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGDF----SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECCE----EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 899999632 35 999999999999999999999999999999999999999999999987542 345688999
Q ss_pred EEccCCccCcc-cHHHHHHcCCCCCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHh
Q 000751 1134 LVQQEPIIFST-TIRENIIYARHNAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVL 1208 (1303)
Q Consensus 1134 ~VpQdp~LF~g-TIreNl~~g~~~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAll 1208 (1303)
||||++.+|+. |++||+.++..... ++++.++++..++.+... ....+||||||||++|||||+
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGqkqRvalAraL~ 147 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHLLG-----------RLPGRLSGGEKQRVAIGRALL 147 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhHhc-----------CChhhCCHHHHHHHHHHHHHH
Confidence 99999999975 99999998643222 123555666665554443 334589999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhcC
Q 000751 1209 KNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1209 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
++|++|||||||++||+.+.+.+.+.|++..++ ++|+|+|||+++.+. .||+|++|++|++++.|+++++..+.
T Consensus 148 ~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 223 (354)
T TIGR02142 148 SSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASP 223 (354)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCc
Confidence 999999999999999999999999999987543 689999999999875 49999999999999999999998764
No 454
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.9e-39 Score=355.74 Aligned_cols=203 Identities=27% Similarity=0.418 Sum_probs=172.6
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHH---Hhc
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW---LRS 385 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~~~ 385 (1303)
|+++|++++|++ +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++..++... +|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999952 357999999999999999999999999999999999999999999999999998776443 678
Q ss_pred ceEEEecccccc-cHhHHHHHhcCC---CCCHHH----HHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHH
Q 000751 386 QIGLVTQEPALL-SLSIRDNIAYGR---DATLDQ----IEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSI 457 (1303)
Q Consensus 386 ~i~~v~Q~~~l~-~~ti~~ni~~~~---~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrial 457 (1303)
.++|++|++.++ ..|++||+.++. ..++++ +.++++..++.+++ ......||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKA-----------KNFPIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------hCCchhCCHHHHHHHHH
Confidence 999999999874 689999998763 233322 33444444443332 33456899999999999
Q ss_pred HHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccccc-cCEEEEEeCceEee
Q 000751 458 ARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIRN-ADYIAVMDEGRLFE 524 (1303)
Q Consensus 458 ARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~ 524 (1303)
|||++.+|++|||||||++||+.+.+.+.+.|.++. ++.|+|++||+++.+.. ||+|++|++|+++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999998874 47899999999999875 99999999999864
No 455
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=4.2e-39 Score=356.17 Aligned_cols=207 Identities=25% Similarity=0.344 Sum_probs=175.5
Q ss_pred cEEEEEEEEEcCCCCC-CCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHH---H
Q 000751 308 NIEFRNVYFSYLSRPE-IPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW---L 383 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~-~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~ 383 (1303)
.|+++|++++|++... .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999963211 35999999999999999999999999999999999999999999999999998876543 2
Q ss_pred -hcceEEEeccccccc-HhHHHHHhcCC---CCC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHH
Q 000751 384 -RSQIGLVTQEPALLS-LSIRDNIAYGR---DAT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIK 454 (1303)
Q Consensus 384 -~~~i~~v~Q~~~l~~-~ti~~ni~~~~---~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqr 454 (1303)
++.|+|++|++.+|. .|+.||+.++. ... .+++.++++..++.+.+.. ....||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDH-----------LPAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhC-----------ChhhCCHHHHHH
Confidence 357999999999887 59999998642 122 2345556666665544433 335799999999
Q ss_pred HHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccccCEEEEEeCceEeec
Q 000751 455 LSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRNADYIAVMDEGRLFEM 525 (1303)
Q Consensus 455 ialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~ 525 (1303)
++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+..||++++|++|++++.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999999999998874 37899999999999888999999999999763
No 456
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=7.7e-39 Score=361.50 Aligned_cols=231 Identities=28% Similarity=0.407 Sum_probs=188.0
Q ss_pred cEEEEeeEEECCCC------CCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCH-
Q 000751 1053 SIELKNVDFCYPSR------PEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNL- 1125 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~------~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~- 1125 (1303)
.|+++||+++|+.. .+.++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++..++.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38899999999731 02369999999999999999999999999999999999999999999999999988765
Q ss_pred --HHhhcceEEEccCCc--cC-cccHHHHHHcCCC---CCCHHHHHHHHHHhchHHHHHhCCCCccc-ccCCCCCCCChH
Q 000751 1126 --RWLRNHLGLVQQEPI--IF-STTIRENIIYARH---NASEAEVKEAARIANAHHFISSLPHGYDT-HVGMRGVDLTPG 1196 (1303)
Q Consensus 1126 --~~lR~~i~~VpQdp~--LF-~gTIreNl~~g~~---~~~~~ei~~al~~a~l~~~I~~lp~Gldt-~vge~G~~LSgG 1196 (1303)
..+|+.++|+||++. ++ ..|+++|+.+... ..+.+ .....+.+.+..+ |+++ ........||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~-----~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~G 155 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKA-----ERLARASEMLRAV--DLDDSVLDKRPPQLSGG 155 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHH-----HHHHHHHHHHHHc--CCChhHhhCCCccCChH
Confidence 357889999999983 44 4699999864311 11111 1112233444443 5543 345566789999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecC
Q 000751 1197 QKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1197 QrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt 1274 (1303)
||||++|||||+++|+||||||||++||+.+...+.+.|++..++ ++|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 156 e~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~ 235 (268)
T PRK10419 156 QLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQP 235 (268)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCC
Confidence 999999999999999999999999999999999999999987542 689999999999987 599999999999999999
Q ss_pred hHHHhhcCchhHHHHh
Q 000751 1275 HDSLLAKNGLYVRLMQ 1290 (1303)
Q Consensus 1275 ~~eLl~~~g~y~~l~~ 1290 (1303)
++++....+.|..-+.
T Consensus 236 ~~~~~~~~~~~~~~~~ 251 (268)
T PRK10419 236 VGDKLTFSSPAGRVLQ 251 (268)
T ss_pred hhhccCCCCHHHHHHH
Confidence 9999876665554444
No 457
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=3.2e-39 Score=363.13 Aligned_cols=211 Identities=27% Similarity=0.408 Sum_probs=182.2
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
++++|++++|+ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.|+
T Consensus 2 l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAG---GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEEC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 68999999995 347999999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEecccc-cccHhHHHHHhcCC-CC----------CHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHH
Q 000751 389 LVTQEPA-LLSLSIRDNIAYGR-DA----------TLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLS 456 (1303)
Q Consensus 389 ~v~Q~~~-l~~~ti~~ni~~~~-~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqria 456 (1303)
|++|++. .+..|++||+.++. .. ..+++.++++..++. .........||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELS-----------HLADRDMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcH-----------hhhcCCcccCCHHHHHHHH
Confidence 9999985 45689999998863 11 112344444444443 2334456689999999999
Q ss_pred HHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhh
Q 000751 457 IARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 457 lARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 533 (1303)
||||++.+|+++||||||++||+.+...+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999999999998875 4789999999999985 599999999999999999988754
No 458
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-39 Score=364.52 Aligned_cols=213 Identities=23% Similarity=0.367 Sum_probs=185.0
Q ss_pred ccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcc
Q 000751 307 GNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQ 386 (1303)
Q Consensus 307 ~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 386 (1303)
..|+++|++++|+ +..+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.
T Consensus 6 ~~l~i~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYG---KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEEC---CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 3699999999995 3469999999999999999999999999999999999999999999999999988888888889
Q ss_pred eEEEecccccc-cHhHHHHHhcCC-CC----------CHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHH
Q 000751 387 IGLVTQEPALL-SLSIRDNIAYGR-DA----------TLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIK 454 (1303)
Q Consensus 387 i~~v~Q~~~l~-~~ti~~ni~~~~-~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqr 454 (1303)
|+||+|++.+| ..|++||+.++. .. .++++.++++..++.++ .......||||||||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~Gq~qr 151 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHL-----------ADQSVDTLSGGQRQR 151 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHH-----------hcCCcccCChHHHHH
Confidence 99999999887 479999998753 11 12244555555555433 334556899999999
Q ss_pred HHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 455 LSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 455 ialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
++||||++++|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 152 AWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999988753 789999999999875 5999999999999999999887
Q ss_pred hh
Q 000751 532 LA 533 (1303)
Q Consensus 532 ~~ 533 (1303)
..
T Consensus 232 ~~ 233 (265)
T PRK10253 232 VT 233 (265)
T ss_pred hh
Confidence 64
No 459
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-39 Score=370.07 Aligned_cols=217 Identities=25% Similarity=0.378 Sum_probs=182.3
Q ss_pred cEEEEEEEEEcCCCC-------CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCH
Q 000751 308 NIEFRNVYFSYLSRP-------EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~-------~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~ 380 (1303)
-|+++|++++|+... ...+|+||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999988765
Q ss_pred H---HHhcceEEEecccc--ccc-HhHHHHHhcC----CCCC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCC
Q 000751 381 E---WLRSQIGLVTQEPA--LLS-LSIRDNIAYG----RDAT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLA 446 (1303)
Q Consensus 381 ~---~~~~~i~~v~Q~~~--l~~-~ti~~ni~~~----~~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~ 446 (1303)
. .+|++|+||+|+|. |+. .||.+|+... .... .+++.++++.+++.+ .+++ .....
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------~~~~----~~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP------EHYD----RYPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh------HHhc----CCCcc
Confidence 3 46789999999984 543 5898888632 1122 234555556555532 1222 34568
Q ss_pred CChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEe
Q 000751 447 LTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLF 523 (1303)
Q Consensus 447 LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~ 523 (1303)
||||||||++|||||+.+|++||+||||++||+.+...+.+.|+++.+ |.|+|+|||+++.+. .||+|++|.+|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999988753 899999999999997 49999999999999
Q ss_pred eccChHHHhhc
Q 000751 524 EMGTHDELLAT 534 (1303)
Q Consensus 524 ~~g~~~~l~~~ 534 (1303)
+.|+.+++.++
T Consensus 235 e~g~~~~~~~~ 245 (327)
T PRK11308 235 EKGTKEQIFNN 245 (327)
T ss_pred EECCHHHHhcC
Confidence 99999999875
No 460
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-39 Score=362.48 Aligned_cols=217 Identities=28% Similarity=0.463 Sum_probs=186.5
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~ 380 (1303)
.|+++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.+ .+.
T Consensus 7 ~l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 7 AIKVKDLSFYYN---TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred eEEEEEEEEEEC---CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 589999999995 34699999999999999999999999999999999999985 48999999999854 445
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCC----CCC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGR----DAT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~----~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
..++..|+||+|++.+|+.|++||+.++. ... ++.+.++++.+++.+++.. .....+..||||||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKD-------KLNKSALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHHH
Confidence 67788999999999999999999998752 112 2335566666666544432 23456678999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccc-cCEEEEEe-----CceEeecc
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRN-ADYIAVMD-----EGRLFEMG 526 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~-~d~i~~l~-----~G~i~~~g 526 (1303)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|+ +|++++.|
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 236 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFG 236 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeC
Confidence 9999999999999999999999999999999999999988778999999999999864 99999997 59999999
Q ss_pred ChHHHhhc
Q 000751 527 THDELLAT 534 (1303)
Q Consensus 527 ~~~~l~~~ 534 (1303)
+++++.+.
T Consensus 237 ~~~~~~~~ 244 (259)
T PRK14260 237 VTTQIFSN 244 (259)
T ss_pred CHHHHhcC
Confidence 99998653
No 461
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-39 Score=361.06 Aligned_cols=217 Identities=27% Similarity=0.475 Sum_probs=187.0
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC-----CCCcEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD-----PTLGEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 380 (1303)
.++++||+++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+.. |++|+|.+||.++.. .+.
T Consensus 3 ~l~~~~v~~~~~---~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFD---DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeC---CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 378999999995 3569999999999999999999999999999999999864 489999999999865 345
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCC---C-CCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGR---D-ATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~-~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
..+++.++||+|++.+|..|++||+.++. . .+. +++.++++.+++.+++..+ ....+..||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK-------LDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH-------HhCCcccCCHHHH
Confidence 67788999999999999999999998752 1 122 3455666777776555422 3456778999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. +|++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999998765 999999999999999999998
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
...
T Consensus 233 ~~~ 235 (250)
T PRK14266 233 FIN 235 (250)
T ss_pred HhC
Confidence 654
No 462
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-39 Score=358.91 Aligned_cols=203 Identities=24% Similarity=0.365 Sum_probs=172.4
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
|+++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +.+++
T Consensus 2 l~~~~l~~~~~~~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~ 73 (255)
T PRK11248 2 LQISHLYADYGGK---PALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERG 73 (255)
T ss_pred EEEEEEEEEeCCe---eeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEE
Confidence 7899999999642 599999999999999999999999999999999999999999999999998653 34699
Q ss_pred EEccCCccCc-ccHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1134 LVQQEPIIFS-TTIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1134 ~VpQdp~LF~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
|+||++.+|+ .|++||+.++.. ... ++++.++++..++.+... ....+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgGq~qrl~lara 142 (255)
T PRK11248 74 VVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEK-----------RYIWQLSGGQRQRVGIARA 142 (255)
T ss_pred EEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhh-----------CChhhCCHHHHHHHHHHHH
Confidence 9999999887 699999986421 112 234556666666654433 2345899999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHh-hcCEEEEEe--CCEEEEecCh
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMR-HVDNIVVLN--GGRIVEEGTH 1275 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~-~~D~Iivl~--~G~Ive~Gt~ 1275 (1303)
|+++|++|||||||++||+.+...+.+.|++..+ +++|+|+|||+++.+. .||+|++|+ +|+|++.++.
T Consensus 143 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 143 LAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999998643 3689999999999875 599999998 5999998764
No 463
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=4.7e-39 Score=371.95 Aligned_cols=212 Identities=27% Similarity=0.424 Sum_probs=180.3
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcce
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI 387 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i 387 (1303)
.|+++|++++|+ +..+|+||||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...++.|
T Consensus 41 ~i~i~nl~k~y~---~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYG---DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 499999999995 356999999999999999999999999999999999999999999999999987654 4678899
Q ss_pred EEEecccccc-cHhHHHHHhcC-C--CCCHHH----HHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHH
Q 000751 388 GLVTQEPALL-SLSIRDNIAYG-R--DATLDQ----IEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIAR 459 (1303)
Q Consensus 388 ~~v~Q~~~l~-~~ti~~ni~~~-~--~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialAR 459 (1303)
|||||++.++ ..|++||+.+. . ..+.++ +.++++.++ +++..++. ..+||||||||++|||
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~-------L~~~~~~~----~~~LS~G~kqrv~lA~ 185 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFAR-------LESKADAR----VSDLSGGMKRRLTLAR 185 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-------CchhhCCC----hhhCCHHHHHHHHHHH
Confidence 9999999886 57999999853 2 222222 222333332 33333433 4579999999999999
Q ss_pred hhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhc
Q 000751 460 AVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 460 al~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+. .||+|++|++|+++..|+.+++...
T Consensus 186 aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 186 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999998875 4899999999999986 4999999999999999999998653
No 464
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=6.7e-39 Score=352.14 Aligned_cols=205 Identities=28% Similarity=0.449 Sum_probs=176.2
Q ss_pred EEEEeeEEECCCCC-CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHH---Hhh
Q 000751 1054 IELKNVDFCYPSRP-EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLR---WLR 1129 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~---~lR 1129 (1303)
|+++||++.|++.. ..++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996421 24599999999999999999999999999999999999999999999999999877643 468
Q ss_pred cceEEEccCCccCc-ccHHHHHHcCCC---CCCH----HHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHH
Q 000751 1130 NHLGLVQQEPIIFS-TTIRENIIYARH---NASE----AEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRI 1201 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~-gTIreNl~~g~~---~~~~----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1201 (1303)
+.++|+||+|.+|. .|+.||+.++.. ..+. +++.++++.+++.+++.+.| .+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYP-----------HNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHH
Confidence 89999999999997 699999986532 1222 23555666666655554443 47999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEecCchhHhhcCEEEEEeCCEE
Q 000751 1202 AIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIM-GNKTTILIAHRAAMMRHVDNIVVLNGGRI 1269 (1303)
Q Consensus 1202 aLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~~TvI~IaHrl~ti~~~D~Iivl~~G~I 1269 (1303)
+||||++++|++|||||||++||+++.+.+.+.|++..+ .++|+|+|||+++....||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999999999999999999999999999999999998754 36999999999998888999999999986
No 465
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.6e-39 Score=376.03 Aligned_cols=201 Identities=24% Similarity=0.392 Sum_probs=172.6
Q ss_pred CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCe----ecCCCCHHHHh----cceEEEeccc
Q 000751 323 EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGE----NIKNLKLEWLR----SQIGLVTQEP 394 (1303)
Q Consensus 323 ~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~----~~~~~~~~~~~----~~i~~v~Q~~ 394 (1303)
...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|. ++...+...++ ++|+||+|++
T Consensus 36 ~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~ 115 (382)
T TIGR03415 36 LVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKF 115 (382)
T ss_pred CEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCC
Confidence 346899999999999999999999999999999999999999999999996 66666655443 5799999999
Q ss_pred cccc-HhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhccCCC
Q 000751 395 ALLS-LSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPS 466 (1303)
Q Consensus 395 ~l~~-~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~~~~~ 466 (1303)
.+|. .|++||+.++. ..+. ++..++++..++.++.. ....+||||||||++|||||+.+|+
T Consensus 116 ~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~-----------~~~~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 116 ALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWAD-----------KKPGELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred cCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9996 79999999874 1222 23455566665554433 3345799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccc-cccCEEEEEeCceEeeccChHHHhhc
Q 000751 467 ILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLI-RNADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 467 ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
|||||||||+||+.+.+.+++.|.++.+ ++|+|+|||+++.+ +.||+|++|++|++++.|++++++.+
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 9999999999999999999999988753 89999999999987 56999999999999999999999865
No 466
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-38 Score=353.78 Aligned_cols=209 Identities=25% Similarity=0.402 Sum_probs=180.7
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
|+++||+++|+. . ..|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ++.++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~--~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPS--RRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChh--hccEE
Confidence 689999999952 2 2499999999999999999999999999999999999999999999998766542 56899
Q ss_pred EEeccccccc-HhHHHHHhcCC-C------CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHh
Q 000751 389 LVTQEPALLS-LSIRDNIAYGR-D------ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARA 460 (1303)
Q Consensus 389 ~v~Q~~~l~~-~ti~~ni~~~~-~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARa 460 (1303)
|++|++.+|. .|+.||+.++. . ..++++.++++..++.+.+...| ..||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 9999999987 59999998753 1 12345667777777766555544 4799999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHhhcC
Q 000751 461 VLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELLATG 535 (1303)
Q Consensus 461 l~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 535 (1303)
++++|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++....
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~~ 221 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSGK 221 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCh
Confidence 9999999999999999999999999999988743 7899999999998864 9999999999999999999887643
No 467
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-39 Score=362.22 Aligned_cols=222 Identities=24% Similarity=0.415 Sum_probs=184.1
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHH-hcc
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWL-RSQ 386 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-~~~ 386 (1303)
-++++|++++|+ +.++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFG---GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEEC---CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 489999999995 3579999999999999999999999999999999999999999999999999988776554 456
Q ss_pred eEEEeccccccc-HhHHHHHhcCCC-CCH----------HHHH--HHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 387 IGLVTQEPALLS-LSIRDNIAYGRD-ATL----------DQIE--EAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 387 i~~v~Q~~~l~~-~ti~~ni~~~~~-~~~----------~~~~--~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
++||+|++.+|. .|++||+.++.. ... ..+. +......+.+.++.+ |++........+||||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~ 159 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQQ 159 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHHH
Confidence 999999999997 599999998631 100 0000 000011123344444 565666777889999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccc-cCEEEEEeCceEeeccChH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHD 529 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~ 529 (1303)
||++||||++.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+.+
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 239 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPE 239 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHH
Confidence 999999999999999999999999999999999999988753 7899999999999865 9999999999999999998
Q ss_pred HHhhc
Q 000751 530 ELLAT 534 (1303)
Q Consensus 530 ~l~~~ 534 (1303)
++...
T Consensus 240 ~~~~~ 244 (255)
T PRK11300 240 EIRNN 244 (255)
T ss_pred HHhhC
Confidence 87643
No 468
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-39 Score=338.89 Aligned_cols=171 Identities=33% Similarity=0.575 Sum_probs=158.7
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
++++||+++|++. ++|+|+||++++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|++++
T Consensus 1 l~~~~l~~~~~~~---~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 76 (173)
T cd03230 1 IEVRNLSKRYGKK---TALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIG 76 (173)
T ss_pred CEEEEEEEEECCe---eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEE
Confidence 4789999999743 4999999999999999999999999999999999999999999999999998766 67788999
Q ss_pred EEccCCccCcc-cHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcCCC
Q 000751 1134 LVQQEPIIFST-TIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAP 1212 (1303)
Q Consensus 1134 ~VpQdp~LF~g-TIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ 1212 (1303)
|+||+|.+|.+ |++||+. ||||||||++||||++++|+
T Consensus 77 ~~~q~~~~~~~~tv~~~~~-----------------------------------------LS~G~~qrv~laral~~~p~ 115 (173)
T cd03230 77 YLPEEPSLYENLTVRENLK-----------------------------------------LSGGMKQRLALAQALLHDPE 115 (173)
T ss_pred EEecCCccccCCcHHHHhh-----------------------------------------cCHHHHHHHHHHHHHHcCCC
Confidence 99999999986 9999984 99999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEE
Q 000751 1213 ILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRI 1269 (1303)
Q Consensus 1213 ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~I 1269 (1303)
||||||||++||+.+.+.+.+.|++..+++.|+|++||+.+.+. .||+|++|++|++
T Consensus 116 illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 116 LLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 99999999999999999999999987555689999999999877 6999999999974
No 469
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-39 Score=362.80 Aligned_cols=218 Identities=29% Similarity=0.434 Sum_probs=187.5
Q ss_pred CccEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecC----
Q 000751 306 HGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIK---- 376 (1303)
Q Consensus 306 ~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~---- 376 (1303)
.+.|+++|++|+|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++.
T Consensus 14 ~~~l~~~~l~~~~~---~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 14 QQKSEVNKLNFYYG---GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CceEEEEEEEEEEC---CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 34699999999995 34699999999999999999999999999999999999975 7999999998774
Q ss_pred CCCHHHHhcceEEEecccccccHhHHHHHhcCCC--------CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCC
Q 000751 377 NLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRD--------ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALT 448 (1303)
Q Consensus 377 ~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~--------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LS 448 (1303)
..+...+++.|+|++|++.+|.+|++||+.++.. ..++++.++++.+++.+.+ .+..+.....||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS 163 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEV-------KDRLGDLAFNLS 163 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhh-------hHHHhCCcccCC
Confidence 2345577889999999999999999999987631 1134556666666554333 234556677999
Q ss_pred hHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccC
Q 000751 449 EEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGT 527 (1303)
Q Consensus 449 gGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~ 527 (1303)
||||||++|||||+++|+++||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+. .||+|++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999999998877899999999999986 599999999999999999
Q ss_pred hHHHhh
Q 000751 528 HDELLA 533 (1303)
Q Consensus 528 ~~~l~~ 533 (1303)
++++..
T Consensus 244 ~~~~~~ 249 (265)
T PRK14252 244 TDTIFI 249 (265)
T ss_pred HHHHHh
Confidence 998864
No 470
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=367.98 Aligned_cols=218 Identities=18% Similarity=0.269 Sum_probs=179.9
Q ss_pred EEEEEEEEEcCCCCC-CCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC----CCCcEEEECCeecCCCCHHHH
Q 000751 309 IEFRNVYFSYLSRPE-IPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD----PTLGEVLLDGENIKNLKLEWL 383 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~-~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~----~~~G~i~~~g~~~~~~~~~~~ 383 (1303)
++++|++++|+.... ..+|+||||+|++||+++|||+||||||||+++|+|+++ |++|+|.++|+|+.+++.+.+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 799999999964221 369999999999999999999999999999999999998 489999999999998887665
Q ss_pred hc----ceEEEecccc--ccc-HhHHH----HHhcCCCCC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCC
Q 000751 384 RS----QIGLVTQEPA--LLS-LSIRD----NIAYGRDAT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALT 448 (1303)
Q Consensus 384 ~~----~i~~v~Q~~~--l~~-~ti~~----ni~~~~~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LS 448 (1303)
++ .|+||+|+|. +.. .|+.+ ++....... .+++.++++..++.+.. .........||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~--------~~l~~~p~~LS 155 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPA--------SRLDVYPHQLS 155 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhCCchhCC
Confidence 43 6999999995 332 35554 444321112 23455666666654321 12345667899
Q ss_pred hHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEeCceEeec
Q 000751 449 EEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEM 525 (1303)
Q Consensus 449 gGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~ 525 (1303)
||||||++|||||+.+|++||+||||++||+.+...+.+.|+++. .|.|+|+|||+++.+. .||+|++|.+|+|++.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 999999999999999999999999999999999999999998875 3899999999999985 5999999999999999
Q ss_pred cChHHHhhc
Q 000751 526 GTHDELLAT 534 (1303)
Q Consensus 526 g~~~~l~~~ 534 (1303)
|+.+++.++
T Consensus 236 g~~~~~~~~ 244 (326)
T PRK11022 236 GKAHDIFRA 244 (326)
T ss_pred CCHHHHhhC
Confidence 999999875
No 471
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.2e-38 Score=357.68 Aligned_cols=224 Identities=24% Similarity=0.391 Sum_probs=184.0
Q ss_pred cEEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccC----CccEEEECCeeCCCCCHHHh
Q 000751 1053 SIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDP----VAGQVLLDGRDLKLYNLRWL 1128 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~----~~G~I~idG~di~~~~~~~l 1128 (1303)
.|+++||+++| +. ++|+|+||+|++||+++|+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~-~~---~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~ 77 (254)
T PRK10418 4 QIELRNIALQA-AQ---PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALR 77 (254)
T ss_pred EEEEeCeEEEe-cc---ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--ccc
Confidence 58999999999 32 499999999999999999999999999999999999999 999999999998632 223
Q ss_pred hcceEEEccCCc-cCc--ccHHHHHHcC----CCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHH
Q 000751 1129 RNHLGLVQQEPI-IFS--TTIRENIIYA----RHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRI 1201 (1303)
Q Consensus 1129 R~~i~~VpQdp~-LF~--gTIreNl~~g----~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1201 (1303)
++.++||||+|. .|. .|+.+|+.+. .....++++.++++.+++.+. ++.++.....||||||||+
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHH
Confidence 467999999985 443 5888887531 112234567777777776432 1233445568999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHh
Q 000751 1202 AIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLL 1279 (1303)
Q Consensus 1202 aLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl 1279 (1303)
+|||||+++|+||||||||++||+.+.+.+.+.|++..++ ++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999999999987543 689999999999885 59999999999999999999998
Q ss_pred hcC-c-hhHHHHh
Q 000751 1280 AKN-G-LYVRLMQ 1290 (1303)
Q Consensus 1280 ~~~-g-~y~~l~~ 1290 (1303)
+.. . .++.++.
T Consensus 230 ~~~~~~~~~~~~~ 242 (254)
T PRK10418 230 NAPKHAVTRSLVS 242 (254)
T ss_pred hCCCCHHHHHHHH
Confidence 763 2 3444554
No 472
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-39 Score=357.00 Aligned_cols=210 Identities=31% Similarity=0.497 Sum_probs=181.3
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
|+++|++|+|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|+++...+.. ++.++
T Consensus 1 l~~~~l~~~~~---~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~--~~~i~ 75 (232)
T cd03300 1 IELENVSKFYG---GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPH--KRPVN 75 (232)
T ss_pred CEEEeEEEEeC---CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChh--hcceE
Confidence 47899999995 34799999999999999999999999999999999999999999999999999876543 67899
Q ss_pred EEeccccccc-HhHHHHHhcCC---CCC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHh
Q 000751 389 LVTQEPALLS-LSIRDNIAYGR---DAT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARA 460 (1303)
Q Consensus 389 ~v~Q~~~l~~-~ti~~ni~~~~---~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARa 460 (1303)
||+|++.+|. .|++||+.++. ..+ ++++.++++..++.+++... ...||||||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~lS~G~~qrl~lara 144 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRK-----------PSQLSGGQQQRVAIARA 144 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHHH
Confidence 9999999986 59999998753 122 23455555655655554443 35899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhc
Q 000751 461 VLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 461 l~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
++++|+++||||||++||+.+.+.+.+.++++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 145 l~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 145 LVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 9999999999999999999999999999988753 899999999999986 4999999999999999998887653
No 473
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-39 Score=361.77 Aligned_cols=217 Identities=26% Similarity=0.465 Sum_probs=183.1
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~ 380 (1303)
.++++|++++|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .+.
T Consensus 4 ~l~i~~v~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYG---SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEEC---CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 489999999995 24699999999999999999999999999999999999974 69999999999853 445
Q ss_pred HHHhcceEEEeccccccc-HhHHHHHhcCC---CC-CH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHH
Q 000751 381 EWLRSQIGLVTQEPALLS-LSIRDNIAYGR---DA-TL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQ 451 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~-~ti~~ni~~~~---~~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGq 451 (1303)
..+|+.|+||+|++.+|. .|++||+.++. .. +. +++.++++..++.+.+ .........+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEV-------KDRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hhHhhCCcccCCHHH
Confidence 677889999999999886 69999998753 11 12 2334445555543322 223445667899999
Q ss_pred HHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEe------CceEee
Q 000751 452 KIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMD------EGRLFE 524 (1303)
Q Consensus 452 kqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~------~G~i~~ 524 (1303)
|||++||||++.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 9999999999999999999999999999999999999998877899999999999875 599999997 899999
Q ss_pred ccChHHHhhc
Q 000751 525 MGTHDELLAT 534 (1303)
Q Consensus 525 ~g~~~~l~~~ 534 (1303)
.|+++++...
T Consensus 234 ~~~~~~~~~~ 243 (258)
T PRK14241 234 IDDTEKIFSN 243 (258)
T ss_pred cCCHHHHHhC
Confidence 9999998654
No 474
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-39 Score=360.21 Aligned_cols=217 Identities=26% Similarity=0.375 Sum_probs=188.4
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~ 380 (1303)
.+.+++.+++|. +.++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. .+.
T Consensus 8 ~~~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYG---NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 488999999994 35799999999999999999999999999999999999987 79999999999864 344
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCCC------CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGRD------ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIK 454 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqr 454 (1303)
..+++.|+||+|++.+|..|+.||+.++.. ...+++.++++.+++.+.+.. ..++...+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHH
Confidence 567888999999999999999999998741 112456777777776554432 2345677899999999
Q ss_pred HHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEe--------CceEeec
Q 000751 455 LSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMD--------EGRLFEM 525 (1303)
Q Consensus 455 ialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~--------~G~i~~~ 525 (1303)
++||||++++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 9999999999999999999999999999999999998877899999999999875 599999996 8999999
Q ss_pred cChHHHhhc
Q 000751 526 GTHDELLAT 534 (1303)
Q Consensus 526 g~~~~l~~~ 534 (1303)
|+++++.+.
T Consensus 238 g~~~~~~~~ 246 (261)
T PRK14263 238 GPTAQIFQN 246 (261)
T ss_pred CCHHHHHhC
Confidence 999998764
No 475
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-39 Score=365.02 Aligned_cols=217 Identities=29% Similarity=0.443 Sum_probs=183.1
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC-----CCCcEEEECCeecCCC--CH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD-----PTLGEVLLDGENIKNL--KL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~--~~ 380 (1303)
.|+++|++|+|+ +.++|+|+||+|++||+++|+||||||||||+++|.|+.+ |++|+|.++|.++... +.
T Consensus 39 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 39 HVVAKNFSIYYG---EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred EEEEeeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 589999999995 2469999999999999999999999999999999999864 4999999999988643 33
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCC---CC-CH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGR---DA-TL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
..+|+.|+||+|++.+|..|+.||+.++. .. +. +++.++++..++.+.+. .........||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~ 188 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS-------DRLDKNALGLSGGQQ 188 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh-------hHhhCChhhCCHHHH
Confidence 45788999999999999889999999863 11 11 23344445444432221 123456678999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++|||||+.+|++|||||||++||+++.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~ 268 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQL 268 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998877789999999999986 5999999999999999999998
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
.+.
T Consensus 269 ~~~ 271 (286)
T PRK14275 269 FTN 271 (286)
T ss_pred HhC
Confidence 764
No 476
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=3.4e-39 Score=353.25 Aligned_cols=200 Identities=28% Similarity=0.486 Sum_probs=169.9
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCC--CCHHHHhcc
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKN--LKLEWLRSQ 386 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~ 386 (1303)
|+++|++++|+ +.++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...+++.
T Consensus 1 l~~~~l~~~~~---~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFG---DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEEC---CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 47899999995 2469999999999999999999999999999999999999999999999999853 345667889
Q ss_pred eEEEeccccccc-HhHHHHHhcCC----CCCHH----HHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHH
Q 000751 387 IGLVTQEPALLS-LSIRDNIAYGR----DATLD----QIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSI 457 (1303)
Q Consensus 387 i~~v~Q~~~l~~-~ti~~ni~~~~----~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrial 457 (1303)
|+|++|++.+|. .|++||+.++. ..+.+ ++.++++.. |++..+.....+||||||||++|
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~l 146 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKV-----------GLADKADAYPAQLSGGQQQRVAI 146 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHc-----------CCHhHhhhCccccCHHHHHHHHH
Confidence 999999999886 79999998752 22222 223333333 33334445557899999999999
Q ss_pred HHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceE
Q 000751 458 ARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRL 522 (1303)
Q Consensus 458 ARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i 522 (1303)
|||++.+|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+. .||+|++|++|++
T Consensus 147 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 147 ARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999998875 4799999999999986 4999999999975
No 477
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=360.71 Aligned_cols=217 Identities=29% Similarity=0.432 Sum_probs=186.0
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCC-----CCcEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDP-----TLGEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~ 380 (1303)
.|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+.
T Consensus 20 ~l~~~nl~~~~~---~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 20 VFEVEGVKVFYG---GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred eEEEeeEEEEeC---CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 699999999995 34699999999999999999999999999999999999863 68999999999864 344
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCCC---C---CHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGRD---A---TLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIK 454 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~---~---~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqr 454 (1303)
..+|+.|+|++|++.+|+.|+.||+.++.. . .++++.++++.+++.+++. .........||||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVK-------DKLKEKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhH-------HHhcCCcccCCHHHHHH
Confidence 567889999999999998899999988631 1 1234455666666654442 22345667899999999
Q ss_pred HHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEe---------CceEee
Q 000751 455 LSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMD---------EGRLFE 524 (1303)
Q Consensus 455 ialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~---------~G~i~~ 524 (1303)
++|||||+.+|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+. .||++++|+ +|++++
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~ 249 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE 249 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 9999999999999999999999999999999999998877899999999999886 599999997 899999
Q ss_pred ccChHHHhhc
Q 000751 525 MGTHDELLAT 534 (1303)
Q Consensus 525 ~g~~~~l~~~ 534 (1303)
.|+.+++...
T Consensus 250 ~g~~~~~~~~ 259 (274)
T PRK14265 250 FSPTEQMFGS 259 (274)
T ss_pred eCCHHHHHhC
Confidence 9999998654
No 478
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=9.3e-39 Score=360.59 Aligned_cols=222 Identities=20% Similarity=0.297 Sum_probs=183.5
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCC---CcEEEECCeecCCC-----C
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPT---LGEVLLDGENIKNL-----K 379 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~---~G~i~~~g~~~~~~-----~ 379 (1303)
-|+++||+++|+ +.++|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... +
T Consensus 4 ~l~~~nl~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFN---QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeC---CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 489999999995 357999999999999999999999999999999999999986 49999999988653 2
Q ss_pred HHHHhcceEEEeccccccc-HhHHHHHhcCCC-C-----------C---HHHHHHHHHHhcchHHHHhcccccCccccCC
Q 000751 380 LEWLRSQIGLVTQEPALLS-LSIRDNIAYGRD-A-----------T---LDQIEEAAKIAHAHTFISSLEKGYETQVGRA 443 (1303)
Q Consensus 380 ~~~~~~~i~~v~Q~~~l~~-~ti~~ni~~~~~-~-----------~---~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~ 443 (1303)
...+++.++|++|++.+|. .|++||+.++.. . . .+++.++++..++.+ .....
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVH-----------FAHQR 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHH-----------HHhCC
Confidence 3566788999999998886 699999987631 1 1 123344444444432 33445
Q ss_pred CCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEeCc
Q 000751 444 GLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMDEG 520 (1303)
Q Consensus 444 g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~~G 520 (1303)
...||||||||++||||++.+|++|||||||++||+++.+.+.+.|+++. .|+|+|++||+++.+. .||+|++|++|
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g 229 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQG 229 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 56899999999999999999999999999999999999999999998875 3799999999999864 59999999999
Q ss_pred eEeeccChHHHhhcChhHHHHHHHH
Q 000751 521 RLFEMGTHDELLATGDLYAELLKCE 545 (1303)
Q Consensus 521 ~i~~~g~~~~l~~~~~~~~~~~~~~ 545 (1303)
++++.|+++++ ......+++...
T Consensus 230 ~i~~~g~~~~~--~~~~~~~~~~~~ 252 (262)
T PRK09984 230 HVFYDGSSQQF--DNERFDHLYRSI 252 (262)
T ss_pred EEEEeCCHHHh--ccHHHHHHHhhh
Confidence 99999999986 233445555443
No 479
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.3e-38 Score=367.65 Aligned_cols=219 Identities=19% Similarity=0.327 Sum_probs=181.7
Q ss_pred cEEEEEEEEEcCCC-CCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCC---CcEEEECCeecCCCCHHHH
Q 000751 308 NIEFRNVYFSYLSR-PEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPT---LGEVLLDGENIKNLKLEWL 383 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~-~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~---~G~i~~~g~~~~~~~~~~~ 383 (1303)
-++++|++++|+.. +...+|+||||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++..++..++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 58999999999632 2346999999999999999999999999999999999999996 9999999999998887765
Q ss_pred h----cceEEEecccc--ccc-HhHHHHHhcC----CCCCHHH----HHHHHHHhcchHHHHhcccccCccccCCCCCCC
Q 000751 384 R----SQIGLVTQEPA--LLS-LSIRDNIAYG----RDATLDQ----IEEAAKIAHAHTFISSLEKGYETQVGRAGLALT 448 (1303)
Q Consensus 384 ~----~~i~~v~Q~~~--l~~-~ti~~ni~~~----~~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LS 448 (1303)
+ +.|+||+|+|. ++. .|+.+|+... ...+.++ +.+.++..+ ||++. ..++.....||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vg-------L~~~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVK-------MPEAR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-------CCChH-HHhcCCcccCC
Confidence 3 47999999983 443 5777776532 1233322 233333333 33332 23566778999
Q ss_pred hHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEeec
Q 000751 449 EEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLFEM 525 (1303)
Q Consensus 449 gGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~ 525 (1303)
||||||++|||||+.+|++||+|||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+. .||+|+||.+|+|++.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999988754 899999999999986 5999999999999999
Q ss_pred cChHHHhhc
Q 000751 526 GTHDELLAT 534 (1303)
Q Consensus 526 g~~~~l~~~ 534 (1303)
|+.+++.+.
T Consensus 244 g~~~~i~~~ 252 (330)
T PRK09473 244 GNARDVFYQ 252 (330)
T ss_pred CCHHHHHhC
Confidence 999999875
No 480
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-39 Score=360.46 Aligned_cols=211 Identities=25% Similarity=0.373 Sum_probs=182.6
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCC--------CcEEEECCeecCCCCH
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPT--------LGEVLLDGENIKNLKL 380 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~--------~G~i~~~g~~~~~~~~ 380 (1303)
|+++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++...+.
T Consensus 2 l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARR---HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEEC---CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 78999999994 347999999999999999999999999999999999999998 9999999999988888
Q ss_pred HHHhcceEEEecccc-cccHhHHHHHhcCC-CC-------CH---HHHHHHHHHhcchHHHHhcccccCccccCCCCCCC
Q 000751 381 EWLRSQIGLVTQEPA-LLSLSIRDNIAYGR-DA-------TL---DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALT 448 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~-l~~~ti~~ni~~~~-~~-------~~---~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LS 448 (1303)
..+++.++||+|++. +|..|++||+.++. .. .. +++.++++.. |+++..+.....||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS 147 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALA-----------GATALVGRDVTTLS 147 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHc-----------CcHhhhcCCcccCC
Confidence 888888999999986 57889999998863 11 11 1223333333 45555666778999
Q ss_pred hHHHHHHHHHHhhc---------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEE
Q 000751 449 EEQKIKLSIARAVL---------LNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAV 516 (1303)
Q Consensus 449 gGqkqrialARal~---------~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~ 516 (1303)
||||||++|||||+ .+|++|||||||++||+.+.+.+.+.++++.+ ++|+|+|||+++.+. .||++++
T Consensus 148 gG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~ 227 (272)
T PRK13547 148 GGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAM 227 (272)
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEE
Confidence 99999999999999 59999999999999999999999999988753 799999999999886 5999999
Q ss_pred EeCceEeeccChHHHhh
Q 000751 517 MDEGRLFEMGTHDELLA 533 (1303)
Q Consensus 517 l~~G~i~~~g~~~~l~~ 533 (1303)
|++|+|++.|+++++..
T Consensus 228 l~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 228 LADGAIVAHGAPADVLT 244 (272)
T ss_pred EECCeEEEecCHHHHcC
Confidence 99999999999988865
No 481
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.3e-38 Score=359.65 Aligned_cols=225 Identities=25% Similarity=0.414 Sum_probs=186.4
Q ss_pred cEEEEEEEEEcCCC------CCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHH
Q 000751 308 NIEFRNVYFSYLSR------PEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLE 381 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~------~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~ 381 (1303)
.|+++||+++|+.. ++.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999521 134799999999999999999999999999999999999999999999999998765556
Q ss_pred HHhcceEEEecccc--ccc-HhHHHHHhcCC----CCC----HHHHHHHHHHhcch-HHHHhcccccCccccCCCCCCCh
Q 000751 382 WLRSQIGLVTQEPA--LLS-LSIRDNIAYGR----DAT----LDQIEEAAKIAHAH-TFISSLEKGYETQVGRAGLALTE 449 (1303)
Q Consensus 382 ~~~~~i~~v~Q~~~--l~~-~ti~~ni~~~~----~~~----~~~~~~~~~~~~~~-~~i~~l~~g~~t~vg~~g~~LSg 449 (1303)
..++.|+||+|++. ++. .|+.+|+.++. ... ++++.++++.+++. +.. ......|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHA-----------SYYPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHH-----------hcCchhcCH
Confidence 66778999999985 443 58999987531 112 23455666666653 222 223457999
Q ss_pred HHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCccccc-cCEEEEEeCceEeecc
Q 000751 450 EQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMG 526 (1303)
Q Consensus 450 GqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g 526 (1303)
|||||++||||++.+|+||||||||++||+++.+.+.+.|.++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999998875 37899999999999875 9999999999999999
Q ss_pred ChHHHhhcC--hhHHHHHH
Q 000751 527 THDELLATG--DLYAELLK 543 (1303)
Q Consensus 527 ~~~~l~~~~--~~~~~~~~ 543 (1303)
+++++.... ..+++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~ 251 (267)
T PRK15112 233 STADVLASPLHELTKRLIA 251 (267)
T ss_pred CHHHHhcCCCCHHHHHHHH
Confidence 999987753 44555654
No 482
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-39 Score=351.67 Aligned_cols=200 Identities=24% Similarity=0.406 Sum_probs=169.7
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. ..++.++
T Consensus 1 l~~~~l~~~~~---~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFG---RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 47899999995 3469999999999999999999999999999999999999999999999987753 4677899
Q ss_pred EEeccccccc-HhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHh
Q 000751 389 LVTQEPALLS-LSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARA 460 (1303)
Q Consensus 389 ~v~Q~~~l~~-~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARa 460 (1303)
|++|++.++. .|++||+.++. .... +++.+.++.. |++........+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrl~la~a 142 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERL-----------ELSEYANKRVEELSKGNQQKVQFIAA 142 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHc-----------CChHHHhCcHhhCCHHHHHHHHHHHH
Confidence 9999999886 59999998753 1221 2233333333 33444445567899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCcccc-ccCEEEEEeCceEeecc
Q 000751 461 VLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMG 526 (1303)
Q Consensus 461 l~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g 526 (1303)
++.+|+++||||||++||+.+.+.+.+.++++. +++|+|++||+++.+. .||++++|++|++++.|
T Consensus 143 l~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 143 VIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 999999999999999999999999999998864 5789999999999886 49999999999998754
No 483
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=9.4e-39 Score=354.76 Aligned_cols=210 Identities=30% Similarity=0.476 Sum_probs=179.0
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
|+++|++|+|+ ++++|+|+||++.+||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~i~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFG---SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEEC---CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 47899999995 3469999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EEeccccccc-HhHHHHHhcCCC---CC----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHh
Q 000751 389 LVTQEPALLS-LSIRDNIAYGRD---AT----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARA 460 (1303)
Q Consensus 389 ~v~Q~~~l~~-~ti~~ni~~~~~---~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARa 460 (1303)
||+|++.+|. .|++||+.++.. .+ .+++.++++..++.++ ......+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~lS~G~~qrl~lara 144 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGL-----------GDRYPNQLSGGQRQRVALARA 144 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhH-----------hhCChhhCCHHHHHHHHHHHH
Confidence 9999999996 499999987641 22 1233344444444332 233446899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCccccc-cCEEEEEeCceEeeccChHHHhhc
Q 000751 461 VLLNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 461 l~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
++++|+++||||||++||+++++.+.+.|.+..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 145 l~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 145 LAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999999988754 7999999999998755 999999999999999999998653
No 484
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-39 Score=373.81 Aligned_cols=210 Identities=26% Similarity=0.444 Sum_probs=181.4
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCC----CHHHHh
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNL----KLEWLR 384 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~~~ 384 (1303)
|++ |++++|+ +. .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+. +....+
T Consensus 2 l~~-~l~k~~~---~~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLG---DL-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeC---CE-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 9999994 22 23 99999999999999999999999999999999999999999999998653 234567
Q ss_pred cceEEEeccccccc-HhHHHHHhcCC-CCCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHhhc
Q 000751 385 SQIGLVTQEPALLS-LSIRDNIAYGR-DATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVL 462 (1303)
Q Consensus 385 ~~i~~v~Q~~~l~~-~ti~~ni~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal~ 462 (1303)
++|+||+|++.+|. .|++||+.++. ....+++.++++..++.++..+ ...+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDR-----------YPGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhC-----------CcccCCHHHHHHHHHHHHHH
Confidence 89999999999985 69999999875 3445566777777766554443 34589999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhcC
Q 000751 463 LNPSILLLDEVTGGLDFEAERAVQEALDLLML--GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLATG 535 (1303)
Q Consensus 463 ~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~--~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 535 (1303)
++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+. .||+|++|++|++++.|+++++..+.
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p 220 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASS 220 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCc
Confidence 99999999999999999999999999988753 789999999999875 59999999999999999999998764
No 485
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=359.32 Aligned_cols=217 Identities=30% Similarity=0.467 Sum_probs=185.7
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCC-----CcEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPT-----LGEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~--~~~ 380 (1303)
.|+++|++|+|+ +..+|+|+||++++|++++|+|+||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 7 ~l~~~nl~~~~~---~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 7 AIKVNNLSFYYD---TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred eEEEeeEEEEeC---CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 699999999995 246999999999999999999999999999999999999985 8999999998853 345
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCC---CC-C----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGR---DA-T----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
..+++.++|++|++.+|..|++||+.++. .. + ++++.++++..++.+++.. ..+..+..||||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~ 156 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKH-------KIHKSALDLSGGQQ 156 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHHH
Confidence 67788999999999999999999998752 11 2 2334556666665444432 34556778999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEeC-----ceEee
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMDE-----GRLFE 524 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~~-----G~i~~ 524 (1303)
||++|||||+++|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+. .||+|++|++ |++++
T Consensus 157 qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~ 236 (261)
T PRK14258 157 QRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVE 236 (261)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEE
Confidence 99999999999999999999999999999999999998863 4899999999999886 5999999999 99999
Q ss_pred ccChHHHhhc
Q 000751 525 MGTHDELLAT 534 (1303)
Q Consensus 525 ~g~~~~l~~~ 534 (1303)
.|+++++...
T Consensus 237 ~~~~~~~~~~ 246 (261)
T PRK14258 237 FGLTKKIFNS 246 (261)
T ss_pred eCCHHHHHhC
Confidence 9999998754
No 486
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-39 Score=323.83 Aligned_cols=214 Identities=27% Similarity=0.500 Sum_probs=185.8
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCCHHHhhcceE
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLG 1133 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1133 (1303)
+++.+++.+|++ ...+++||||+++.||.+||.|+|||||||+++.|..++.|++|+|+|||.|+... +...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~-p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRD-PSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccC-hHHHhhhcc
Confidence 678999999975 23489999999999999999999999999999999999999999999999998764 567899999
Q ss_pred EEccCCccCc-ccHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHH
Q 000751 1134 LVQQEPIIFS-TTIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARV 1206 (1303)
Q Consensus 1134 ~VpQdp~LF~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARA 1206 (1303)
+++-+.-|+. .|.||||.|+.. +.+ +.++.+..+..++.+.+ |+.+| +||-|+|||++||||
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~-------~rRv~----~~S~G~kqkV~iARA 147 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYL-------DRRVG----EFSTGMKQKVAIARA 147 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHH-------HHHHh----hhchhhHHHHHHHHH
Confidence 9997777775 599999987632 122 23344444555555443 45555 799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh-hcCEEEEEeCCEEEEecChHHHhhc
Q 000751 1207 VLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEGTHDSLLAK 1281 (1303)
Q Consensus 1207 llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~Gt~~eLl~~ 1281 (1303)
|+++|+|++||||||+||..+.+.+++.+.+....|++||+-||-++.++ -||+|+++.+|+++..|+++++.++
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 99999999999999999999999999999998776899999999999998 7999999999999999999999875
No 487
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-38 Score=338.17 Aligned_cols=173 Identities=38% Similarity=0.599 Sum_probs=160.2
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCCC--HHHhhcc
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYN--LRWLRNH 1131 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~--~~~lR~~ 1131 (1303)
|+++|++++|++. ++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+++ ...+++.
T Consensus 1 i~~~~l~~~~~~~---~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (178)
T cd03229 1 LELKNVSKRYGQK---TVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRR 77 (178)
T ss_pred CEEEEEEEEECCe---EEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhc
Confidence 5789999999642 5999999999999999999999999999999999999999999999999998876 5678899
Q ss_pred eEEEccCCccCc-ccHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHhcC
Q 000751 1132 LGLVQQEPIIFS-TTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKN 1210 (1303)
Q Consensus 1132 i~~VpQdp~LF~-gTIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAllr~ 1210 (1303)
++|+||+|.+|. .|++||+.+. ||||||||++||||++++
T Consensus 78 i~~~~q~~~~~~~~t~~~~l~~~---------------------------------------lS~G~~qr~~la~al~~~ 118 (178)
T cd03229 78 IGMVFQDFALFPHLTVLENIALG---------------------------------------LSGGQQQRVALARALAMD 118 (178)
T ss_pred EEEEecCCccCCCCCHHHheeec---------------------------------------CCHHHHHHHHHHHHHHCC
Confidence 999999999886 4999998763 999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCE
Q 000751 1211 APILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGR 1268 (1303)
Q Consensus 1211 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~ 1268 (1303)
|+++||||||++||+.+...+.+.|++..++ ++|+|++||+++.+. .||+|++|++|+
T Consensus 119 p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 119 PDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 9999999999999999999999999987654 589999999999987 599999999984
No 488
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-38 Score=343.63 Aligned_cols=192 Identities=23% Similarity=0.374 Sum_probs=164.2
Q ss_pred cEEEEeeEEECCCC-CCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhcccc---CCccEEEECCeeCCCCCHHHh
Q 000751 1053 SIELKNVDFCYPSR-PEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYD---PVAGQVLLDGRDLKLYNLRWL 1128 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~-~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~---~~~G~I~idG~di~~~~~~~l 1128 (1303)
.+.++||+|.|+.. .+.++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 36899999999853 34579999999999999999999999999999999999999 89999999999998765 457
Q ss_pred hcceEEEccCCccCcc-cHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHH
Q 000751 1129 RNHLGLVQQEPIIFST-TIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVV 1207 (1303)
Q Consensus 1129 R~~i~~VpQdp~LF~g-TIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAl 1207 (1303)
|++++|+||++.+|.+ |++|||.++... . .+ .....||||||||++||||+
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~------~------------------~~----~~~~~LS~Ge~qrl~laral 133 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRC------K------------------GN----EFVRGISGGERKRVSIAEAL 133 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhh------c------------------cc----cchhhCCHHHHHHHHHHHHH
Confidence 8899999999988874 999999865310 0 12 23347999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEec-CchhH-hhcCEEEEEeCCEEEEec
Q 000751 1208 LKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAH-RAAMM-RHVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1208 lr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaH-rl~ti-~~~D~Iivl~~G~Ive~G 1273 (1303)
+++|++|||||||++||+++.+.+.+.+++..++ ++|+|+++| +.+.+ ..||+|++|++|++++.|
T Consensus 134 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 134 VSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred hhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 9999999999999999999999999999987543 467676655 45554 679999999999999865
No 489
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=366.23 Aligned_cols=217 Identities=26% Similarity=0.452 Sum_probs=185.2
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC-----CCCcEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD-----PTLGEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 380 (1303)
.|+++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 45 ~l~i~nl~~~~~---~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~~ 121 (305)
T PRK14264 45 KLSVEDLDVYYG---DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVNL 121 (305)
T ss_pred eEEEEEEEEEeC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccccH
Confidence 589999999995 3579999999999999999999999999999999999986 689999999999864 345
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCCCC--------------------CHHHHHHHHHHhcchHHHHhcccccCccc
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGRDA--------------------TLDQIEEAAKIAHAHTFISSLEKGYETQV 440 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~--------------------~~~~~~~~~~~~~~~~~i~~l~~g~~t~v 440 (1303)
..+|+.|+||+|++.+|+.||+||+.++... .++++.++++.+++. .++++..
T Consensus 122 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~ 194 (305)
T PRK14264 122 VELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALW-------DEVNDRL 194 (305)
T ss_pred HHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCc-------hhhhHHh
Confidence 6678899999999999999999999976310 122344444444443 2334556
Q ss_pred cCCCCCCChHHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEE-EEEe
Q 000751 441 GRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYI-AVMD 518 (1303)
Q Consensus 441 g~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i-~~l~ 518 (1303)
.....+||||||||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||++ ++|+
T Consensus 195 ~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l~ 274 (305)
T PRK14264 195 DDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFLT 274 (305)
T ss_pred cCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEec
Confidence 677889999999999999999999999999999999999999999999999877799999999999976 49997 5779
Q ss_pred CceEeeccChHHHhhc
Q 000751 519 EGRLFEMGTHDELLAT 534 (1303)
Q Consensus 519 ~G~i~~~g~~~~l~~~ 534 (1303)
+|++++.|+++++...
T Consensus 275 ~G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 275 GGELVEYDDTDKIFEN 290 (305)
T ss_pred CCEEEEeCCHHHHHhC
Confidence 9999999999988653
No 490
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1e-37 Score=395.69 Aligned_cols=105 Identities=28% Similarity=0.490 Sum_probs=94.4
Q ss_pred Cccc-ccCCCCCCCChHHHHHHHHHHHHhcCC---CEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchhHh
Q 000751 1181 GYDT-HVGMRGVDLTPGQKQRIAIARVVLKNA---PILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR 1256 (1303)
Q Consensus 1181 Gldt-~vge~G~~LSgGQrQRlaLARAllr~p---~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~ 1256 (1303)
|++. .++.....||||||||++|||||+++| +++||||||++||+++...+.+.|+++...++|+|+|+|+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 5544 356777899999999999999999999 999999999999999999999999987655789999999999999
Q ss_pred hcCEEEEE------eCCEEEEecChHHHhhcCchh
Q 000751 1257 HVDNIVVL------NGGRIVEEGTHDSLLAKNGLY 1285 (1303)
Q Consensus 1257 ~~D~Iivl------~~G~Ive~Gt~~eLl~~~g~y 1285 (1303)
.||+|++| ++|+|++.|+++++.+..+.|
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~~~s~ 932 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKVEASY 932 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhCcccH
Confidence 99999999 799999999999999765433
No 491
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=9.4e-39 Score=357.27 Aligned_cols=210 Identities=25% Similarity=0.379 Sum_probs=173.4
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccC--CCCCcEEEECCeecCCCCHHHH-hc
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFY--DPTLGEVLLDGENIKNLKLEWL-RS 385 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~~~G~i~~~g~~~~~~~~~~~-~~ 385 (1303)
|+++|++++|+ +.++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|.++...+.... +.
T Consensus 1 l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVE---DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEEC---CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 47899999995 346999999999999999999999999999999999994 7999999999999988776554 45
Q ss_pred ceEEEeccccccc-HhHHHHHhcCCC----------CCH----HHHHHHHHHhcchHHHHhcccccCccccCCCC-CCCh
Q 000751 386 QIGLVTQEPALLS-LSIRDNIAYGRD----------ATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGL-ALTE 449 (1303)
Q Consensus 386 ~i~~v~Q~~~l~~-~ti~~ni~~~~~----------~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~-~LSg 449 (1303)
.++||+|++.+|. .|++||+.+... .+. +++.++++..++.+ + ....... .|||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~---~~~~~~~~~LS~ 147 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDE-------E---FLNRSVNEGFSG 147 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCch-------h---hcccccccCcCH
Confidence 6999999999886 589999976421 111 12233333333321 1 1122233 4999
Q ss_pred HHHHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCCccccc--cCEEEEEeCceEeecc
Q 000751 450 EQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRLSLIRN--ADYIAVMDEGRLFEMG 526 (1303)
Q Consensus 450 GqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~~~~~~--~d~i~~l~~G~i~~~g 526 (1303)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 148 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g 227 (243)
T TIGR01978 148 GEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSG 227 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEec
Confidence 99999999999999999999999999999999999999998875 47999999999999875 7999999999999999
Q ss_pred ChHHH
Q 000751 527 THDEL 531 (1303)
Q Consensus 527 ~~~~l 531 (1303)
+++++
T Consensus 228 ~~~~~ 232 (243)
T TIGR01978 228 DVELA 232 (243)
T ss_pred CHHHh
Confidence 98754
No 492
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=358.51 Aligned_cols=217 Identities=26% Similarity=0.399 Sum_probs=181.2
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCC-----CcEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPT-----LGEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~--~~~ 380 (1303)
-++++|++|+|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYG---DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEEC---CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 378999999995 347999999999999999999999999999999999999875 8999999999864 345
Q ss_pred HHHhcceEEEeccccccc-HhHHHHHhcCC---CC-CHHHHHHH----HHHhcchHHHHhcccccCccccCCCCCCChHH
Q 000751 381 EWLRSQIGLVTQEPALLS-LSIRDNIAYGR---DA-TLDQIEEA----AKIAHAHTFISSLEKGYETQVGRAGLALTEEQ 451 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~-~ti~~ni~~~~---~~-~~~~~~~~----~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGq 451 (1303)
..+|+.|+|++|++.+|. .|+.||+.++. .. .+++..+. ++..++.+.+ ++.. .....+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~----~~~~~~LS~G~ 153 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRL----KTPATGLSGGQ 153 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhh----cCCcccCCHHH
Confidence 567889999999999887 59999998653 11 22322222 2233332222 2222 34456899999
Q ss_pred HHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCccccc-cCEEEEEeCceEeeccChHH
Q 000751 452 KIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRN-ADYIAVMDEGRLFEMGTHDE 530 (1303)
Q Consensus 452 kqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~-~d~i~~l~~G~i~~~g~~~~ 530 (1303)
|||++||||++++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQ 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999999875 99999999999999999999
Q ss_pred Hhhc
Q 000751 531 LLAT 534 (1303)
Q Consensus 531 l~~~ 534 (1303)
+...
T Consensus 234 ~~~~ 237 (252)
T PRK14272 234 LFTN 237 (252)
T ss_pred HHhC
Confidence 8764
No 493
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.5e-38 Score=347.65 Aligned_cols=201 Identities=25% Similarity=0.420 Sum_probs=173.6
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
++++||+++|+ . .++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+++.+.+ ..++.++
T Consensus 1 ~~~~~l~~~~~---~--~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYE---H--LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeC---C--cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 36899999994 1 468999999999999999999999999999999999999999999999987643 3577899
Q ss_pred EEeccccccc-HhHHHHHhcCC--C-----CCHHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHh
Q 000751 389 LVTQEPALLS-LSIRDNIAYGR--D-----ATLDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARA 460 (1303)
Q Consensus 389 ~v~Q~~~l~~-~ti~~ni~~~~--~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARa 460 (1303)
||+|+|.+|. .|+.||+.++. . ..++++.++++..++.+...+.| .+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHH
Confidence 9999999886 59999998642 1 12345666777777665554444 3799999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCCcccc-ccCEEEEEeCceEeeccC
Q 000751 461 VLLNPSILLLDEVTGGLDFEAERAVQEALDLLM--LGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGT 527 (1303)
Q Consensus 461 l~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~--~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~ 527 (1303)
++++|+++||||||++||+++.+.+.+.|.++. .++|+|++||+++.+. .||++++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999998875 3789999999999876 599999999999998764
No 494
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-38 Score=355.22 Aligned_cols=217 Identities=26% Similarity=0.444 Sum_probs=183.6
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECC------eecCCCCHH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDG------ENIKNLKLE 381 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g------~~~~~~~~~ 381 (1303)
.|+++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .++...+..
T Consensus 10 ~i~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 10 VFNISRLYLYIN---DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred heeeeeEEEecC---CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 589999999995 35799999999999999999999999999999999999999997666655 666666777
Q ss_pred HHhcceEEEecccccccH-hHHHHHhcCC---CC-CHHH----HHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 382 WLRSQIGLVTQEPALLSL-SIRDNIAYGR---DA-TLDQ----IEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 382 ~~~~~i~~v~Q~~~l~~~-ti~~ni~~~~---~~-~~~~----~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
.+|+.++|++|++.+|.+ |+.||+.++. .. .+++ +.++++..++++++ .......+..||||||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEV-------YDRLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccc-------hhhhcCCcccCCHHHH
Confidence 889999999999999864 9999999753 11 2222 34444444443322 1223456778999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++||||++++|+++||||||++||+.++..+.+.|.++.+++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999998877899999999999985 5999999999999999999998
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
.+.
T Consensus 240 ~~~ 242 (257)
T PRK14246 240 FTS 242 (257)
T ss_pred HhC
Confidence 765
No 495
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=357.35 Aligned_cols=217 Identities=27% Similarity=0.413 Sum_probs=182.6
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC--C---CCcEEEECCeecCC--CCH
Q 000751 308 NIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD--P---TLGEVLLDGENIKN--LKL 380 (1303)
Q Consensus 308 ~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~--~~~ 380 (1303)
.|+++||+++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++.. .+.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYG---KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEEC---CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 489999999995 3579999999999999999999999999999999999875 5 58999999998864 344
Q ss_pred HHHhcceEEEecccccccHhHHHHHhcCC---CC-C----HHHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHH
Q 000751 381 EWLRSQIGLVTQEPALLSLSIRDNIAYGR---DA-T----LDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQK 452 (1303)
Q Consensus 381 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~---~~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqk 452 (1303)
..+++.|+||+|++.+|..|+++|+.++. .. . ++++.++++.+++.+.+ ..........||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEV-------KDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccch-------hhHHhcCcccCCHHHH
Confidence 56778999999999999999999998752 11 1 12334444555443222 2234456678999999
Q ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHH
Q 000751 453 IKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDEL 531 (1303)
Q Consensus 453 qrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 531 (1303)
||++||||++++|++|||||||++||+++.+.+.+.|+++.+++|+|+|||+++.+. .||+|++|++|++++.|+..+.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998877789999999999986 5999999999999999998887
Q ss_pred hhc
Q 000751 532 LAT 534 (1303)
Q Consensus 532 ~~~ 534 (1303)
...
T Consensus 235 ~~~ 237 (252)
T PRK14255 235 FLN 237 (252)
T ss_pred hcC
Confidence 654
No 496
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-39 Score=323.59 Aligned_cols=212 Identities=26% Similarity=0.433 Sum_probs=182.7
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCCCCCcEEEECCeecCCCCHHHHhcceE
Q 000751 309 IEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG 388 (1303)
Q Consensus 309 i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 388 (1303)
+++.+++++|++ ...+++||||+++.|++++|.|||||||||+++.|..++.|++|.|++||.|... ++...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcc
Confidence 678999999963 3458999999999999999999999999999999999999999999999999876 4567889999
Q ss_pred EEecccccc-cHhHHHHHhcCC---CCCH----HHHHHHHHHhcchHHHHhcccccCccccCCCCCCChHHHHHHHHHHh
Q 000751 389 LVTQEPALL-SLSIRDNIAYGR---DATL----DQIEEAAKIAHAHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARA 460 (1303)
Q Consensus 389 ~v~Q~~~l~-~~ti~~ni~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~vg~~g~~LSgGqkqrialARa 460 (1303)
+++-+.-|+ ..|++|||.|.. +... .++.+..+.-++.+. +..+..++|-|+|||++||||
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~-----------~~rRv~~~S~G~kqkV~iARA 147 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEY-----------LDRRVGEFSTGMKQKVAIARA 147 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHH-----------HHHHHhhhchhhHHHHHHHHH
Confidence 999887787 479999999642 3332 334444444444443 334455799999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CCeEEEEecCCcccc-ccCEEEEEeCceEeeccChHHHhhc
Q 000751 461 VLLNPSILLLDEVTGGLDFEAERAVQEALDLLML-GRSTIIIARRLSLIR-NADYIAVMDEGRLFEMGTHDELLAT 534 (1303)
Q Consensus 461 l~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~-~~t~i~ith~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 534 (1303)
|.+||++++||||||+||..+.+.+.+.+.+++. |+++|+.||.++.++ .||+|+++.+|+++..|+.+++.++
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 9999999999999999999999999999988875 999999999999998 5999999999999999999998764
No 497
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-38 Score=346.84 Aligned_cols=202 Identities=26% Similarity=0.416 Sum_probs=169.4
Q ss_pred EEEEeeEEECCCCCCcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCccEEEECCeeCCCC----CHHHhh
Q 000751 1054 IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLY----NLRWLR 1129 (1303)
Q Consensus 1054 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~----~~~~lR 1129 (1303)
+++ ||+++|++. .+ |+||+|++ |++||+|+||||||||+++|.|+++|++|+|.++|.++... +...+|
T Consensus 2 ~~~-~l~~~~~~~---~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 74 (214)
T cd03297 2 LCV-DIEKRLPDF---TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQ 74 (214)
T ss_pred cee-eeeEecCCe---ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHh
Confidence 355 899999753 24 99999999 99999999999999999999999999999999999998643 234578
Q ss_pred cceEEEccCCccCc-ccHHHHHHcCCCCCC----HHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHH
Q 000751 1130 NHLGLVQQEPIIFS-TTIRENIIYARHNAS----EAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIA 1204 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~-gTIreNl~~g~~~~~----~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLA 1204 (1303)
++++|+||++.+|+ .|++||+.++..... ++++.++++..++.+ ........||||||||++||
T Consensus 75 ~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~la 143 (214)
T cd03297 75 RKIGLVFQQYALFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLDH-----------LLNRYPAQLSGGEKQRVALA 143 (214)
T ss_pred hcEEEEecCCccCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCHh-----------HhhcCcccCCHHHHHHHHHH
Confidence 89999999999996 599999987543212 223444555554433 33445568999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCchhHh-hcCEEEEEeCCEEEEec
Q 000751 1205 RVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAAMMR-HVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1205 RAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~ti~-~~D~Iivl~~G~Ive~G 1273 (1303)
||++++|++|||||||++||+++.+.+.+.|++...+ ++|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 144 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 144 RALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999999987543 689999999999875 59999999999999876
No 498
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=9.5e-39 Score=352.49 Aligned_cols=213 Identities=23% Similarity=0.343 Sum_probs=170.7
Q ss_pred EEEEEEEEEcCCCC-CCCcccceeEEeeCCCEEEEECCCCCcHHHHHHHHhccCC---CCCcEEEECCeecCCCCHHHHh
Q 000751 309 IEFRNVYFSYLSRP-EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYD---PTLGEVLLDGENIKNLKLEWLR 384 (1303)
Q Consensus 309 i~~~~v~f~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~---~~~G~i~~~g~~~~~~~~~~~~ 384 (1303)
++|+||+|+|++.+ .+++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 57999999997532 3679999999999999999999999999999999999999 99999999999875 34678
Q ss_pred cceEEEecccccccH-hHHHHHhcCCC-CCHHHHHHHHHHhcchH-HHHhcccccCccccCCCCCCChHHHHHHHHHHhh
Q 000751 385 SQIGLVTQEPALLSL-SIRDNIAYGRD-ATLDQIEEAAKIAHAHT-FISSLEKGYETQVGRAGLALTEEQKIKLSIARAV 461 (1303)
Q Consensus 385 ~~i~~v~Q~~~l~~~-ti~~ni~~~~~-~~~~~~~~~~~~~~~~~-~i~~l~~g~~t~vg~~g~~LSgGqkqrialARal 461 (1303)
+.|+|++|++.+|.+ |++||+.++.. .......+.......+. .+..+ |+..........||||||||++||||+
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHHH
Confidence 899999999999976 99999987531 10000000001001111 22222 333334455678999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCC-ccc-cccCEEEEEeCceEeecc
Q 000751 462 LLNPSILLLDEVTGGLDFEAERAVQEALDLLM-LGRSTIIIARRL-SLI-RNADYIAVMDEGRLFEMG 526 (1303)
Q Consensus 462 ~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~-~~~t~i~ith~~-~~~-~~~d~i~~l~~G~i~~~g 526 (1303)
+++|++|||||||++||+.+...+.+.+.++. +++|+|++||++ ..+ ..||+|++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999998874 478999999998 354 569999999999999865
No 499
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-38 Score=340.27 Aligned_cols=183 Identities=25% Similarity=0.454 Sum_probs=162.7
Q ss_pred cEEEEeeEEECCCCC-CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccc--cCCccEEEECCeeCCCCCHHHhh
Q 000751 1053 SIELKNVDFCYPSRP-EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFY--DPVAGQVLLDGRDLKLYNLRWLR 1129 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~--~~~~G~I~idG~di~~~~~~~lR 1129 (1303)
.|+++|++++|++.. +.++|+|+||+|++||+++|+|+||||||||+++|.|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 589999999997421 236999999999999999999999999999999999986 489999999999886 5678
Q ss_pred cceEEEccCCccCcc-cHHHHHHcCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccccCCCCCCCChHHHHHHHHHHHHh
Q 000751 1130 NHLGLVQQEPIIFST-TIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVL 1208 (1303)
Q Consensus 1130 ~~i~~VpQdp~LF~g-TIreNl~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaLARAll 1208 (1303)
++++|++|+|.+|.+ |++||+.++.. ++ +||||||||++||||++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~~----------~~------------------------~LSgGe~qrv~la~al~ 124 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFSAL----------LR------------------------GLSVEQRKRLTIGVELA 124 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHHHH----------Hh------------------------cCCHHHhHHHHHHHHHh
Confidence 899999999988875 99999986320 00 79999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcCCcEEEEEecCchh--HhhcCEEEEEeC-CEEEEec
Q 000751 1209 KNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAM--MRHVDNIVVLNG-GRIVEEG 1273 (1303)
Q Consensus 1209 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~t--i~~~D~Iivl~~-G~Ive~G 1273 (1303)
++|++|||||||++||+++.+.+.+.|++....++|+|+|||+++. ...||+|++|++ |++++.|
T Consensus 125 ~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 125 AKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred cCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999875556999999999983 567999999999 9999876
No 500
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-38 Score=339.86 Aligned_cols=219 Identities=31% Similarity=0.520 Sum_probs=192.6
Q ss_pred cEEEEeeEEECCCCC---------------------CcceeeeeeEEeeCCCEEEEEcCCCCChHHHHHHHhccccCCcc
Q 000751 1053 SIELKNVDFCYPSRP---------------------EVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAG 1111 (1303)
Q Consensus 1053 ~I~~~~Vsf~Y~~~~---------------------~~~vL~~isl~I~~Ge~vaIVG~sGSGKSTL~~lL~rl~~~~~G 1111 (1303)
.|+++||+.-+..++ ...-++|+||+|+.||+..|.|-||||||||+++|.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 578888888775432 11358999999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCCHHHhh----cceEEEccCCccCc-ccHHHHHHcCCC--CCC----HHHHHHHHHHhchHHHHHhCCC
Q 000751 1112 QVLLDGRDLKLYNLRWLR----NHLGLVQQEPIIFS-TTIRENIIYARH--NAS----EAEVKEAARIANAHHFISSLPH 1180 (1303)
Q Consensus 1112 ~I~idG~di~~~~~~~lR----~~i~~VpQdp~LF~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~I~~lp~ 1180 (1303)
+|++||.||..++.+.|| +++++|+|..-||+ -||.||..||.. ..+ .+...++++.+||.+|-.+.|+
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~ 163 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPN 163 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcc
Confidence 999999999999988774 57999999999997 599999999853 122 3456788999999999888775
Q ss_pred CcccccCCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhhcC-CcEEEEEecCch-hHhhc
Q 000751 1181 GYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMG-NKTTILIAHRAA-MMRHV 1258 (1303)
Q Consensus 1181 Gldt~vge~G~~LSgGQrQRlaLARAllr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~-~~TvI~IaHrl~-ti~~~ 1258 (1303)
+||||+|||+.|||||..+|+|||+|||.|||||--...+|+.|.++.++ .||+++|||+|+ .++--
T Consensus 164 -----------eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 164 -----------ELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred -----------cccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 79999999999999999999999999999999999999999988765322 589999999997 57789
Q ss_pred CEEEEEeCCEEEEecChHHHhhcC
Q 000751 1259 DNIVVLNGGRIVEEGTHDSLLAKN 1282 (1303)
Q Consensus 1259 D~Iivl~~G~Ive~Gt~~eLl~~~ 1282 (1303)
|||..|++|+|+..|||+|++.+.
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~P 256 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNP 256 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCc
Confidence 999999999999999999999763
Done!