Query 000751
Match_columns 1303
No_of_seqs 370 out of 4928
Neff 8.3
Searched_HMMs 29240
Date Tue Mar 26 17:24:33 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000751.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_521-524//hhsearch_pdb/000751hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1720.8 127.4 1180 28-1296 134-1320(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1510.6 117.4 1164 29-1297 107-1275(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 862.2 76.6 580 712-1294 58-655 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 780.9 62.6 578 714-1294 33-627 (1284)
5 3qf4_A ABC transporter, ATP-bi 1.0 1 1 732.4 73.7 570 719-1297 14-583 (587)
6 3qf4_B Uncharacterized ABC tra 1.0 1 1 728.4 65.9 572 715-1297 24-595 (598)
7 4a82_A Cystic fibrosis transme 1.0 1 1 724.1 68.8 572 717-1293 3-577 (578)
8 2yl4_A ATP-binding cassette SU 1.0 1 1 707.9 75.3 576 717-1297 8-588 (595)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 704.5 77.7 568 716-1294 13-581 (582)
10 3b60_A Lipid A export ATP-bind 1.0 1 1 703.1 74.8 568 716-1294 13-581 (582)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1720.81 Aligned_cols=1180 Identities=31% Similarity=0.513 Sum_probs=998.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999998099346810488225999999559999999999
Q 000751 28 WLSELALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSE 107 (1303)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~g~l~sr~~~Dv~~i~~~~~~ 107 (1303)
.+..+++++++++++.+++.|++.+||.++++|+..++|.++|+|++++|++|||++ ++|++++|+++|++.+++++.+
T Consensus 134 ~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~-~~G~l~sr~~~D~~~i~~~~~~ 212 (1321)
T 4f4c_A 134 DVMNVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTN-HSGTLATKLFDNLERVKEGTGD 212 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHT-CCTTHHHHHHHHHHHHHHTSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999999999978898998799-8489999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999989999999999999884999999999999999999999999999999999999999999999982189999842
Q 000751 108 KVGNYIHNMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFT 187 (1303)
Q Consensus 108 ~~~~~~~~~~~~~~~~v~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~ 187 (1303)
.++.++..+.+++++++++|+++|.+++++++..|+++++..++.+...+..++.++..++..+.+.|.++|+++||+|+
T Consensus 213 ~l~~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~ 292 (1321)
T 4f4c_A 213 KIGMAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLN 292 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999999998999999999999999999999999999999999999999999999998399999821
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 16999999999999999999999999998899999999999999999999999807766777999999999999999999
Q 000751 188 NETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQA 267 (1303)
Q Consensus 188 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~ 267 (1303)
+|+.+.++|.+..++..+...+.....++..+...++.++.+++++|+|.+++..|.++.|.+++++.++..+..|+..+
T Consensus 293 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~ 372 (1321)
T 4f4c_A 293 GLRYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLA 372 (1321)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 42999999999999999999999999999999999999999999999999999959986999999999999999999989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECC
Q ss_conf 9999999999999999999724698888889--99999877648999799984999999851211388509978999879
Q 000751 268 ATNFYSFDQGRIAAYRLYEMISRSSSTTNYD--GNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGR 345 (1303)
Q Consensus 268 ~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~--~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~ 345 (1303)
...+..+.++.++++|++++++.+++..... +....+..++|+|+||+|+||++++.++|+|+||++++|++++||||
T Consensus 373 ~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~ 452 (1321)
T 4f4c_A 373 GPQLAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGS 452 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEEC
T ss_conf 99999999999999999999717853456665565677888767999855407999987433331886228827899805
Q ss_pred CCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEEECCCCCCCHHHHHHHHCCC-CCCHHHHHHHHHHHC
Q ss_conf 9992889999994048999858998995069989888742418890456555273999984199-999999999999813
Q 000751 346 NGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAH 424 (1303)
Q Consensus 346 sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~ 424 (1303)
||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||+|+||||++||+|||++|+ +++++++++||+.|+
T Consensus 453 sGsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~ 532 (1321)
T 4f4c_A 453 SGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMAN 532 (1321)
T ss_dssp SSSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf 89857788887545651644861579965011259998504666587533207861678864155220999999998756
Q ss_pred CHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 14779731024475235799989948999999987520499889983899999989899999999986199739998128
Q 000751 425 AHTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARR 504 (1303)
Q Consensus 425 ~~~~i~~l~~g~~t~ig~~g~~LSgGqkqrialARal~~~~~ililDE~ts~lD~~~~~~~~~~l~~~~~~~t~i~i~h~ 504 (1303)
+++||+.||+||+|.|||+|.+||||||||||||||+|++|+|||||||||+||+++|+.++++++++.+++|+|+||||
T Consensus 533 l~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHr 612 (1321)
T 4f4c_A 533 AEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHR 612 (1321)
T ss_dssp CHHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSC
T ss_pred CHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 54688708888860755898877777879999999872599989984554468878999999999998479889997363
Q ss_pred CCCCCCCCEEEEEECCEEEECCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 74102467899984965841059278952490689999978740078888766756554000023766777888999965
Q 000751 505 LSLIRNADYIAVMDEGRLFEMGTHDELLATGDLYAELLKCEEAAKLPRRMPVRNYKETSTFQIEKDSSASHSFQEPSSPK 584 (1303)
Q Consensus 505 ~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (1303)
+++++.||+|++|++|+|+++|+|+||++.++.|++++..|...+....... .......+......
T Consensus 613 ls~i~~aD~Iivl~~G~ive~Gth~eL~~~~g~y~~l~~~q~~~~~~~~~~~------------~~~~~~~~~~~~~~-- 678 (1321)
T 4f4c_A 613 LSTIRNADLIISCKNGQVVEVGDHRALMAQQGLYYDLVTAQTFTDAVDSAAE------------GKFSRENSVARQTS-- 678 (1321)
T ss_dssp TTTTTTCSEEEEEETTEEEEEECHHHHHTTTCHHHHHHHHHHHHHHHHHHHC------------C---------------
T ss_pred HHHHHHCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC------------CCCCCCCCCCCCCC--
T ss_conf 8789868989996399651368999999853279999996221222233233------------44332232111222--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 67897422246668999988888998889995035431399987457784211123212247889844446666667899
Q 000751 585 MLKSPSLQRVGIYRPTDGAFDSQESPKVLSPPSEKMLENGMPMDAADKEPSIRRQDSFEMRLPELPKIDVHSSNRQTSNG 664 (1303)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (1303)
+.+...... ++..+...+.. .+
T Consensus 679 -----------------------~~~~~~~~~-------------~~~~~~~~~~~--------------------~~-- 700 (1321)
T 4f4c_A 679 -----------------------EHEGLSRQA-------------SEMDDIMNRVR--------------------SS-- 700 (1321)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------CCCCCCCCC-------------CCCCCHHHHHH--------------------CC--
T ss_conf -----------------------223422222-------------22110221110--------------------13--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999998877799766555565556899999999850124432106862178876654797999999999999989878
Q 000751 665 SDPESPISPLLTSDPKNERSHSQTFSRPHSHSDDFPTKVREEESKHQKAPSFWRLAELSFAEWLYAVLGSIGAAIFGSFN 744 (1303)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~~~ 744 (1303)
........+..... .+. ...........+.+........+++++...++.++.+.++.+.+.+.+...
T Consensus 701 ~~~~~~~~~~~~~~--~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~ 768 (1321)
T 4f4c_A 701 TIGSITNGPVIDEK--EER----------IGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIY 768 (1321)
T ss_dssp -----------------CC----------CCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHH
T ss_pred CCCCCCCCCCHHHH--HHH----------CCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 21245677402577--753----------154038999999997078631099999998778999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 79999999999985187502334787999999999999999999999999999999999999999999999809943300
Q 000751 745 PLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFD 824 (1303)
Q Consensus 745 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~ 824 (1303)
|.+++++..+++.+.... .........|.+++++++++..++.+++.+++.+.+.++..++|.++|++++++|++|||
T Consensus 769 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd 846 (1321)
T 4f4c_A 769 PTYSVFFTSFMNVFAGNP--ADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFD 846 (1321)
T ss_dssp HHHHHHHHHHHHHTSSCS--STTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTT
T ss_pred HHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC
T ss_conf 999999999998751793--455667899999999999999999999999999999999999999998887349933321
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 14677346999998139999999999899999999999999999999979999999999999999999999999778899
Q 000751 825 EEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRG 904 (1303)
Q Consensus 825 ~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~i~~~~~~~~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~ 904 (1303)
.+++++|++++|+++|++.++..++..+..++..++.++++++++++++|++++++++.+|++.+......+.......+
T Consensus 847 ~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~ 926 (1321)
T 4f4c_A 847 SPQNASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVK 926 (1321)
T ss_dssp SGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTT
T ss_pred CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 67888488885025059999999999999999986537777022137868999999998889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999994199999813518999999999999999999999999999999999999999999999969863
Q 000751 905 IQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVR 984 (1303)
Q Consensus 905 ~~~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 984 (1303)
..+...+....+.|++.|+++||+|+.++++.++|.+..+...+..++.....+..+++...+..+..+++++++..++.
T Consensus 927 ~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~ 1006 (1321)
T 4f4c_A 927 SASEFADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALII 1006 (1321)
T ss_dssp TSSHHHHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998889889999996279888614148899999999999999999999999999999999999999999987578875
Q ss_pred CCCCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf 3865978899--99999999999978888649999999999999999981299989999989899997662899755898
Q 000751 985 DGYMDLPTAL--KEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFC 1062 (1303)
Q Consensus 985 ~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~ 1062 (1303)
.+..+.+... ..+..+.+....+.........+.+...+..+++++++.+++.+.... ....++..|.|+|+||+|+
T Consensus 1007 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~-~~~~~~~~g~I~f~nVsf~ 1085 (1321)
T 4f4c_A 1007 TDPPTMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLSL-AGEKKKLYGKVIFKNVRFA 1085 (1321)
T ss_dssp SSSCSSCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTTCC-CSBCCCCCCCEEEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCCCCCEEEEEEEEEE
T ss_conf 376542147899999999877889999999999999999999989998607665777667-7878888881899987985
Q ss_pred CCCCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCC
Q ss_conf 79999852011015886389799998279998688999870566588658999996079999787641368883678667
Q 000751 1063 YPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIF 1142 (1303)
Q Consensus 1063 Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Q~p~Lf 1142 (1303)
||++++.+||+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+||+++++++||++|+||||||+||
T Consensus 1086 Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF 1165 (1321)
T 4f4c_A 1086 YPERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLF 1165 (1321)
T ss_dssp CTTSCSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCC
T ss_pred CCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEE
T ss_conf 79999882124516998898999998999981999999995686389978999999865499999985459987899732
Q ss_pred CCCHHHHHHCCC--CCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 212899997188--899999999999995269999819998664237888888958999999999970399999984778
Q 000751 1143 STTIRENIIYAR--HNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEAS 1220 (1303)
Q Consensus 1143 ~gTIreNI~~g~--~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSGGQkQRiaLARAll~~p~ILlLDEaT 1220 (1303)
+|||||||.||. ++++|+++++|++.|+++++|++||+||||.|||+|.+||||||||||||||++|+|+||||||||
T Consensus 1166 ~gTIreNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaT 1245 (1321)
T 4f4c_A 1166 DCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEAT 1245 (1321)
T ss_dssp SEEHHHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCC
T ss_pred CCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 72399997454999999999999999982984999717678999823889156999999999999997179989996811
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCC
Q ss_conf 9999898999999999844199299998339016740598999969899883495789640706699874552044
Q 000751 1221 SSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQPHYGKG 1296 (1303)
Q Consensus 1221 SaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~aD~Iivl~~G~Ive~Gt~~eLl~~~g~y~~l~~~q~~~~ 1296 (1303)
|+||++||+.|+++|++.+. +||+|+||||++|+++||+|+||++|+|+|+|+|+||++++|.|++||+.|..+.
T Consensus 1246 SaLD~~tE~~Iq~~l~~~~~-~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~~g~y~~L~~~Q~~e~ 1320 (1321)
T 4f4c_A 1246 SALDTESEKVVQEALDRARE-GRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSEKGAYYKLTQKQMTEK 1320 (1321)
T ss_dssp CSTTSHHHHHHHHHHTTTSS-SSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHCC--------------
T ss_pred CCCCHHHHHHHHHHHHHHCC-CCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCC
T ss_conf 15789999999999999739-9989996068999996999999989899998888999849809999999998505
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1510.56 Aligned_cols=1164 Identities=36% Similarity=0.622 Sum_probs=995.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999980993468104882259999995599999999999
Q 000751 29 LSELALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEK 108 (1303)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~~g~l~sr~~~Dv~~i~~~~~~~ 108 (1303)
+...++++++++++.+++.+++.+++...++++..++|.++|++++++|+.||+++ ++|++++|+++|++.+++.+...
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~-~~G~l~sr~~~D~~~i~~~~~~~ 185 (1284)
T 3g5u_A 107 MTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVH-DVGELNTRLTDDVSKINEGIGDK 185 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSC-CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999986998997568-87789999998899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
Q ss_conf 99999899999999999998849999999999999999999999999999999999999999999999821899998421
Q 000751 109 VGNYIHNMATFFSGLAIAFVNCWQIALITLCTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTN 188 (1303)
Q Consensus 109 ~~~~~~~~~~~~~~~v~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~ 188 (1303)
++.++..++++++.+++++.++|.+++++++..|+++++..++.+...+..++.++..++..+.+.|.++|+++||+|++
T Consensus 186 ~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~ 265 (1284)
T 3g5u_A 186 IGMFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGG 265 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCC
T ss_conf 99999999999999999999989999999999999999999999999999999999999999999999978799998465
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 69999999999999999999999999988999999999999999999999998077667779999999999999999999
Q 000751 189 ETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIVTALFAVILSGLGLNQAA 268 (1303)
Q Consensus 189 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~ 268 (1303)
|+.+.++|.+..++..+...+.....++..++..++.++.+++++|+|++++..|.++.|.+++++++......++.++.
T Consensus 266 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~ 345 (1284)
T 3g5u_A 266 QKKELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQAS 345 (1284)
T ss_dssp CCSHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 39999999999999999999999999999999999999999999999999999299889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCC
Q ss_conf 9999999999999999997246988888--89999998776489997999849999998512113885099789998799
Q 000751 269 TNFYSFDQGRIAAYRLYEMISRSSSTTN--YDGNTLPSVHGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRN 346 (1303)
Q Consensus 269 ~~~~~~~~~~~a~~ri~~~l~~~~~~~~--~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~s 346 (1303)
..+..+..+..++.|++++++.+++..+ ..+...+...+.|+++||+|+|+++++.++|+|+||++++||+++|||||
T Consensus 346 ~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~s 425 (1284)
T 3g5u_A 346 PNIEAFANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNS 425 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCC
T ss_conf 99999999999999999997289867766656777777777189999899769999871012545897599889998999
Q ss_pred CCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEEECCCCCCCHHHHHHHHCCC-CCCHHHHHHHHHHHCC
Q ss_conf 992889999994048999858998995069989888742418890456555273999984199-9999999999998131
Q 000751 347 GSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DATLDQIEEAAKIAHA 425 (1303)
Q Consensus 347 GsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~-~~~~~~~~~~~~~~~~ 425 (1303)
|||||||+++|.|+|+|++|+|.+||+|+++++.+++|++|+||+|+|++|++||+|||.+|. +.++++++++++.+++
T Consensus 426 GsGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~ 505 (1284)
T 3g5u_A 426 GCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANA 505 (1284)
T ss_dssp SSSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCC
T ss_conf 99799999998078899973899999987757999998654898688753776699997457989999999999998296
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 47797310244752357999899489999999875204998899838999999898999999999861997399981287
Q 000751 426 HTFISSLEKGYETQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRL 505 (1303)
Q Consensus 426 ~~~i~~l~~g~~t~ig~~g~~LSgGqkqrialARal~~~~~ililDE~ts~lD~~~~~~~~~~l~~~~~~~t~i~i~h~~ 505 (1303)
+++++.+|+|++|.+|++|.+||||||||++||||++++|+|||||||||+||+++++.+++.++...+++|+|+||||+
T Consensus 506 ~~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l 585 (1284)
T 3g5u_A 506 YDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRL 585 (1284)
T ss_dssp HHHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCH
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCH
T ss_conf 99997465633450147878659999999999999952999899979877779999999999999973999899994077
Q ss_pred CCCCCCCEEEEEECCEEEECCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 41024678999849658410592789524906899999787400788887667565540000237667778889999656
Q 000751 506 SLIRNADYIAVMDEGRLFEMGTHDELLATGDLYAELLKCEEAAKLPRRMPVRNYKETSTFQIEKDSSASHSFQEPSSPKM 585 (1303)
Q Consensus 506 ~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (1303)
+++..||+|++|++|++++.|+|+++++.++.|.+++..+.......... + .. .. ..+....
T Consensus 586 ~~i~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~-~~-------~~------~~~~~~~-- 647 (1284)
T 3g5u_A 586 STVRNADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTAGNEIELGN--E-AC-------KS------KDEIDNL-- 647 (1284)
T ss_dssp HHHTTCSEEEECSSSCCCCEECHHHHHHTTSHHHHHHHHTC---------------------------------------
T ss_pred HHHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCC--C-CC-------CC------CCCCCCC--
T ss_conf 89974998999989999997889999867877999999743002211133--3-33-------32------2222344--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 78974222466689999888889988899950354313999874577842111232122478898444466666678999
Q 000751 586 LKSPSLQRVGIYRPTDGAFDSQESPKVLSPPSEKMLENGMPMDAADKEPSIRRQDSFEMRLPELPKIDVHSSNRQTSNGS 665 (1303)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (1303)
.... .. .......+...
T Consensus 648 ----------------------~~~~---~~--------------~~~~~~~~~~~------------------------ 664 (1284)
T 3g5u_A 648 ----------------------DMSS---KD--------------SGSSLIRRRST------------------------ 664 (1284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------CCCC---CC--------------CCCCCCCCCCC------------------------
T ss_conf ----------------------3333---33--------------33200034543------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999988777997665555655568999999998501244321068621788766547979999999999999898787
Q 000751 666 DPESPISPLLTSDPKNERSHSQTFSRPHSHSDDFPTKVREEESKHQKAPSFWRLAELSFAEWLYAVLGSIGAAIFGSFNP 745 (1303)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~~~~ 745 (1303)
. .... ...... . .....+..........+++++.+.++.|+++.++.++.++.+.+.|
T Consensus 665 ~--~~~~----~~~~~~--------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 722 (1284)
T 3g5u_A 665 R--KSIC----GPHDQD--------R--------KLSTKEALDEDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQP 722 (1284)
T ss_dssp -----------------------------------------CCCCCSCCCTTHHHHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred C--CCCC----CCCCCC--------C--------CCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 3--3445----642233--------2--------1102455531366258999999845157999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999999851875023347879999999999999999999999999999999999999999999998099433001
Q 000751 746 LLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDE 825 (1303)
Q Consensus 746 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~ 825 (1303)
.++++++.+++.+...............|..++++++++..++.+++.+++.+.+.++..++|.++|++++++|++||++
T Consensus 723 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~ 802 (1284)
T 3g5u_A 723 AFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDD 802 (1284)
T ss_dssp HHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHS
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
T ss_conf 99999999999985568503367799999999999999999999999999999999999999999999998399888757
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 46773469999981399999999998999999999999999999999799999999999999999999999997788999
Q 000751 826 EENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGI 905 (1303)
Q Consensus 826 ~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~i~~~~~~~~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~ 905 (1303)
+++++|++++|+++|+..++..++..+..++..+..++.++++++.++|.+++++++.+|++++..+...+++.....+.
T Consensus 803 ~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~ 882 (1284)
T 3g5u_A 803 PKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKD 882 (1284)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89988999999999999999999999999999999999999999999699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999941999998135189999999999999999999999999999999999999999999999698633
Q 000751 906 QKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRD 985 (1303)
Q Consensus 906 ~~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 985 (1303)
.+........+.|.+.|+++|++|+.++++.++|.+..+...+...+.....+...++.+.+.++..++++|++++++..
T Consensus 883 ~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~ 962 (1284)
T 3g5u_A 883 KKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQ 962 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999988999998465999999999999999999999999999999999999999999999999999990
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC
Q ss_conf 86597889999999999999978888649999999999999999981299989999989899997662899755898799
Q 000751 986 GYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFCYPS 1065 (1303)
Q Consensus 986 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~ 1065 (1303)
+.++++.++.++.++.+...++.......+.+.++..++.+++++++.+++.+........++...|.|+|+||+|+||+
T Consensus 963 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~ 1042 (1284)
T 3g5u_A 963 QLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPT 1042 (1284)
T ss_dssp SCSCSTTHHHHHHHHHHHHHHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSSCCCTTTTSCCEEEEEEEBCCSC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC
T ss_conf 98069999999999999999999999999999999999999999983887666655566545677785799998997799
Q ss_pred CCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCC
Q ss_conf 99852011015886389799998279998688999870566588658999996079999787641368883678667212
Q 000751 1066 RPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTT 1145 (1303)
Q Consensus 1066 ~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Q~p~Lf~gT 1145 (1303)
+++.++|+|+||+|++||++|||||||||||||+++|.|+|+|++|+|.+||+|+++++++++|++++||||||.+|++|
T Consensus 1043 ~~~~~~l~~vsl~i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~t 1122 (1284)
T 3g5u_A 1043 RPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCS 1122 (1284)
T ss_dssp GGGCCSBSSCCEEECSSSEEEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSB
T ss_pred CCCCEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCC
T ss_conf 99870020305997699889998899997899999994686789977989999800078999970268987787406666
Q ss_pred HHHHHHCCCC--CCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 8999971888--99999999999995269999819998664237888888958999999999970399999984778999
Q 000751 1146 IRENIIYARH--NASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSI 1223 (1303)
Q Consensus 1146 IreNI~~g~~--~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSGGQkQRiaLARAll~~p~ILlLDEaTSaL 1223 (1303)
|+|||.++.+ ..++++++++++.++++++++++|+||||.+||+|.+||||||||+|||||++++|+|||||||||+|
T Consensus 1123 i~eNi~~~~~~~~~~~~~i~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~l 1202 (1284)
T 3g5u_A 1123 IAENIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSAL 1202 (1284)
T ss_dssp HHHHHTCCCSSCCCCHHHHHHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSC
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 99997466877899999999999983959999727042456117888933899999999999997499999986875557
Q ss_pred CHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCC
Q ss_conf 98989999999998441992999983390167405989999698998834957896407066998745520444
Q 000751 1224 ESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQPHYGKGL 1297 (1303)
Q Consensus 1224 D~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~aD~Iivl~~G~Ive~Gt~~eLl~~~g~y~~l~~~q~~~~~ 1297 (1303)
|+++++.|++.+++... ++|+|+||||+++++.||+|+||++|+|+|.|+|++|++++|.|++||+.|..+..
T Consensus 1203 D~~~~~~i~~~l~~~~~-~~tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~~~g~y~~l~~~q~~~~~ 1275 (1284)
T 3g5u_A 1203 DTESEKVVQEALDKARE-GRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQKGIYFSMVSVQAGAKR 1275 (1284)
T ss_dssp CHHHHHHHHHHHHHHSS-SSCEEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHHSCSHHHHHHHHHC----
T ss_pred CHHHHHHHHHHHHHHCC-CCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCC
T ss_conf 99999999999998679-99899995587999809989999899899977899998477779999999761322
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=862.17 Aligned_cols=580 Identities=34% Similarity=0.525 Sum_probs=520.3
Q ss_pred CCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-----------------CHHHHHHHHHH
Q ss_conf 8621788766547-97999999999999989878799999999999851875-----------------02334787999
Q 000751 712 KAPSFWRLAELSF-AEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPE-----------------ERHHLREEVNK 773 (1303)
Q Consensus 712 ~~~~~~~l~~~~~-~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~i~~~~~~~-----------------~~~~~~~~~~~ 773 (1303)
++.++++++.+.. ..++++.++.+++++.++..|+..++++.+++.+.... ........+..
T Consensus 58 ~~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (1321)
T 4f4c_A 58 NKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMN 137 (1321)
T ss_dssp SCCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHH
T ss_pred CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 87799997315676789999999999999999999999999999999970100014543000344310016899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999980994330014677346999998139999999999899
Q 000751 774 WCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLS 853 (1303)
Q Consensus 774 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~l~ 853 (1303)
+++.+++++++.+++.+++.+++.+.+.+...++|.++|+|++++|++|||+ +++|++++|+++|++.++..+...+.
T Consensus 138 ~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~--~~~G~l~sr~~~D~~~i~~~~~~~l~ 215 (1321)
T 4f4c_A 138 VVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDT--NHSGTLATKLFDNLERVKEGTGDKIG 215 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHH--TCCTTHHHHHHHHHHHHHHTSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999997889899879--98489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 99999999999999999997999999999999999999999999977889999999999999999994199999813518
Q 000751 854 IFIQDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGN 933 (1303)
Q Consensus 854 ~~~~~~~~~i~~i~~~~~~~~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~gi~tI~~~~~~~ 933 (1303)
.++..+..++++++++++++|++++++++.+|++++......+...+..++.+....+....+.|.+.|+++||+|+.++
T Consensus 216 ~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 295 (1321)
T 4f4c_A 216 MAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLR 295 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999998399999821429
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999996986338659788999999999999997888864
Q 000751 934 KVMELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGL 1013 (1303)
Q Consensus 934 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1303)
.+.++|.+..++..+...+.....+...++..++.++..++++|++++++..|.++++.++.++.++.....++......
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~ 375 (1321)
T 4f4c_A 296 YELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQ 375 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999959986999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCC
Q ss_conf 99999999999999999812999899999898999976628997558987999985201101588638979999827999
Q 000751 1014 APYILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGS 1093 (1303)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGS 1093 (1303)
...+.++..++.|++++++.+|..+........+....|.|+|+||+|+||++++.++|+|+||+|+||+++||||||||
T Consensus 376 ~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGs 455 (1321)
T 4f4c_A 376 LAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGC 455 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCC
T ss_conf 99999999999999999717853456665565677888767999855407999987433331886228827899805898
Q ss_pred CHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHH
Q ss_conf 86889998705665886589999960799997876413688836786672128999971888999999999999952699
Q 000751 1094 GKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHH 1173 (1303)
Q Consensus 1094 GKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Q~p~Lf~gTIreNI~~g~~~~~~~ei~~al~~a~l~~ 1173 (1303)
|||||+++|+|+|+|++|+|.+||+|++++++++||++|+||||||+||++||||||.+|.++++++++++||+.|++++
T Consensus 456 GKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~ 535 (1321)
T 4f4c_A 456 GKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEK 535 (1321)
T ss_dssp CHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHH
T ss_conf 57788887545651644861579965011259998504666587533207861678864155220999999998756546
Q ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCH
Q ss_conf 99819998664237888888958999999999970399999984778999989899999999984419929999833901
Q 000751 1174 FISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAA 1253 (1303)
Q Consensus 1174 ~I~~lp~Gldt~vge~G~~LSGGQkQRiaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ 1253 (1303)
||+.||+|+||.|||+|.+||||||||||||||++++|+||||||||||||+++|+.++++|+.+.+ ++|+|+||||++
T Consensus 536 ~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~-~~T~iiiaHrls 614 (1321)
T 4f4c_A 536 FIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAK-GRTTIIIAHRLS 614 (1321)
T ss_dssp HHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHT-TSEEEEECSCTT
T ss_pred HHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC-CCEEEEECCCHH
T ss_conf 8870888886075589887777787999999987259998998455446887899999999999847-988999736387
Q ss_pred HHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHH
Q ss_conf 67405989999698998834957896407066998745520
Q 000751 1254 MMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQPHYG 1294 (1303)
Q Consensus 1254 ti~~aD~Iivl~~G~Ive~Gt~~eLl~~~g~y~~l~~~q~~ 1294 (1303)
++++||+|+||++|+|+|+|+|+||++++|.|++|++.|..
T Consensus 615 ~i~~aD~Iivl~~G~ive~Gth~eL~~~~g~y~~l~~~q~~ 655 (1321)
T 4f4c_A 615 TIRNADLIISCKNGQVVEVGDHRALMAQQGLYYDLVTAQTF 655 (1321)
T ss_dssp TTTTCSEEEEEETTEEEEEECHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 89868989996399651368999999853279999996221
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=780.86 Aligned_cols=578 Identities=35% Similarity=0.596 Sum_probs=508.3
Q ss_pred CHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC----------------HHHHHHHHHHHHH
Q ss_conf 2178876654-7979999999999999898787999999999998518750----------------2334787999999
Q 000751 714 PSFWRLAELS-FAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEE----------------RHHLREEVNKWCL 776 (1303)
Q Consensus 714 ~~~~~l~~~~-~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~i~~~~~~~~----------------~~~~~~~~~~~~~ 776 (1303)
..+++++.+. +..++++.++.+++++.++..|+.+++++.+++.+..... ..........|.+
T Consensus 33 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (1284)
T 3g5u_A 33 VSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAY 112 (1284)
T ss_dssp CTTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 56999998726579999999999999999999999999999999986134443322222211111002446889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999980994330014677346999998139999999999899999
Q 000751 777 IIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFI 856 (1303)
Q Consensus 777 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~ 856 (1303)
++++++++..++.+++.+++.+.+.+...++|.++|++++++|++|||+ +++|++++|+++|++.++..++..+..++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~--~~~G~l~sr~~~D~~~i~~~~~~~~~~~~ 190 (1284)
T 3g5u_A 113 YYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDV--HDVGELNTRLTDDVSKINEGIGDKIGMFF 190 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHS--CCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999998699899756--88778999999889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 99999999999999997999999999999999999999999977889999999999999999994199999813518999
Q 000751 857 QDSAAVIVAVIIGMLLEWRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVM 936 (1303)
Q Consensus 857 ~~~~~~i~~i~~~~~~~~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~ 936 (1303)
..+..+++++++++.++|++++++++.+|++.+...+..+..++..++.+....+....+.|.+.|+++||+|+.++++.
T Consensus 191 ~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~ 270 (1284)
T 3g5u_A 191 QAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKEL 270 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHH
T ss_conf 99999999999999998999999999999999999999999999999999999999999999997879999846539999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999996986338659788999999999999997888864999
Q 000751 937 ELYRLQLKKIFTKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPY 1016 (1303)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1303)
++|.+..++..+...+.....+...++..++..+..++++|+|+.++..|.+++|.++.++........++.........
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (1284)
T 3g5u_A 271 ERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEA 350 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999929988999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCHH
Q ss_conf 99999999999999812999899999898999976628997558987999985201101588638979999827999868
Q 000751 1017 ILKRRKSLISVFEIIDRVPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKS 1096 (1303)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKS 1096 (1303)
+.++..++.|++++++.+++.++.......++...|.|+|+||+|+||++++.++|+|+||+|++||++|||||||||||
T Consensus 351 ~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKS 430 (1284)
T 3g5u_A 351 FANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKS 430 (1284)
T ss_dssp HHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHH
T ss_conf 99999999999999728986776665677777777718999989976999987101254589759988999899999799
Q ss_pred HHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHH
Q ss_conf 89998705665886589999960799997876413688836786672128999971888999999999999952699998
Q 000751 1097 TIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFIS 1176 (1303)
Q Consensus 1097 TLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Q~p~Lf~gTIreNI~~g~~~~~~~ei~~al~~a~l~~~I~ 1176 (1303)
||+++|+|+|+|++|+|.+||+|+++++++++|++|+||||+|++|++||+|||.+|.++.++++++++++.+++++++.
T Consensus 431 Tl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~ 510 (1284)
T 3g5u_A 431 TTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIM 510 (1284)
T ss_dssp HHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH
T ss_conf 99999807889997389999998775799999865489868875377669999745798999999999999829699997
Q ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHH
Q ss_conf 19998664237888888958999999999970399999984778999989899999999984419929999833901674
Q 000751 1177 SLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMR 1256 (1303)
Q Consensus 1177 ~lp~Gldt~vge~G~~LSGGQkQRiaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~ 1256 (1303)
.+|+|+||.+|++|.+||||||||+|||||++++|+|||||||||+||+++|+.+++.++.... ++|+|+||||++++.
T Consensus 511 ~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~i~ 589 (1284)
T 3g5u_A 511 KLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKARE-GRTTIVIAHRLSTVR 589 (1284)
T ss_dssp HSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHT-TSEEEEECSCHHHHT
T ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCEEEEEECCHHHHH
T ss_conf 4656334501478786599999999999999529998999798777799999999999999739-998999940778997
Q ss_pred HCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHH
Q ss_conf 05989999698998834957896407066998745520
Q 000751 1257 HVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQPHYG 1294 (1303)
Q Consensus 1257 ~aD~Iivl~~G~Ive~Gt~~eLl~~~g~y~~l~~~q~~ 1294 (1303)
.||+|+||++|+|+|.|+|+||++++|.|++++..|..
T Consensus 590 ~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 627 (1284)
T 3g5u_A 590 NADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTA 627 (1284)
T ss_dssp TCSEEEECSSSCCCCEECHHHHHHTTSHHHHHHHHTC-
T ss_pred CCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHH
T ss_conf 49989999899999978899998678779999997430
No 5
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=732.43 Aligned_cols=570 Identities=26% Similarity=0.395 Sum_probs=495.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76654797999999999999989878799999999999851875023347879999999999999999999999999999
Q 000751 719 LAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYFGI 798 (1303)
Q Consensus 719 l~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 798 (1303)
++.+.++.++.+.++.++.++..++....+++++.+++...... .......+.++++++.++..++.+++.++..+
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (587)
T 3qf4_A 14 LARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARG----DFSLVLKTGILMLIVALIGAVGGIGCTVFASY 89 (587)
T ss_dssp GGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999987369----87999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999809943300146773469999981399999999998999999999999999999999799999
Q 000751 799 MGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRLAL 878 (1303)
Q Consensus 799 ~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~i~~~~~~~~~l~l 878 (1303)
.+.++..++|.++|+++++.|+.||++ +++|++++|+++|++.++..+...+..++.....+++++++++.++|.+++
T Consensus 90 ~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l 167 (587)
T 3qf4_A 90 ASQNFGADLRRDLFRKVLSFSISNVNR--FHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSS 167 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCHHHHHH--SCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999997889799765--888999999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999778899999999999999999941999998135189999999999999999999999999
Q 000751 879 VALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMAIG 958 (1303)
Q Consensus 879 i~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 958 (1303)
++++.+|++.+......+..++..++.++...+....+.|.+.|+++||+|+.++.+.++|.+..++..+...+.....+
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (587)
T 3qf4_A 168 VLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIV 247 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999855999998621499999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999999999999999999969863386597889999999999999978888649999999999999999981299989
Q 000751 959 FAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKID 1038 (1303)
Q Consensus 959 ~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1303)
...++...+..+..++++|++++++..|.+++|.++.+..+......++.........+.++..++.|+.++++.+++.+
T Consensus 248 ~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 327 (587)
T 3qf4_A 248 FALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIE 327 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999998499389999999999999999999999999999999999999999976897657
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 99998989999766289975589879999852011015886389799998279998688999870566588658999996
Q 000751 1039 PDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGR 1118 (1303)
Q Consensus 1039 ~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~idG~ 1118 (1303)
+. ......+...+.|+++||+|+|+++ ..++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|.+||+
T Consensus 328 ~~-~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~ 405 (587)
T 3qf4_A 328 EA-DNALALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDEL 405 (587)
T ss_dssp CC-TTCBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSS
T ss_pred CC-CCCCCCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
T ss_conf 88-7765668888807997889984899-976421117998699889998999997999999992786699867989999
Q ss_pred ECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 07999978764136888367866721289999718889999999999999526999981999866423788888895899
Q 000751 1119 DLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQK 1198 (1303)
Q Consensus 1119 di~~~~~~~lR~~i~~V~Q~p~Lf~gTIreNI~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSGGQk 1198 (1303)
|+++++.+++|++++||||+|++|++||+|||.++.++.++++++++++.++++++++.+|+|+||.++++|.+||||||
T Consensus 406 ~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGqr 485 (587)
T 3qf4_A 406 DVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQK 485 (587)
T ss_dssp BGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHHH
T ss_pred ECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHHH
T ss_conf 83407899998413897789867675599998524889999999999999684999975653121275189899299999
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999703999999847789999898999999999844199299998339016740598999969899883495789
Q 000751 1199 QRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSL 1278 (1303)
Q Consensus 1199 QRiaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~aD~Iivl~~G~Ive~Gt~~eL 1278 (1303)
||++||||++++|+||+||||||+||+++++.+++.+++... ++|+|+||||++++..||+|++|++|+|+|.|+|+||
T Consensus 486 Qrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el 564 (587)
T 3qf4_A 486 QRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTK-GCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKEL 564 (587)
T ss_dssp HHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHST-TCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 999999999729999999797544799999999999998679-9989998227688981998999989989997889999
Q ss_pred HHCCCHHHHHHHHHHHCCC
Q ss_conf 6407066998745520444
Q 000751 1279 LAKNGLYVRLMQPHYGKGL 1297 (1303)
Q Consensus 1279 l~~~g~y~~l~~~q~~~~~ 1297 (1303)
+++++.|++++..|..++.
T Consensus 565 ~~~~~~~~~~~~~~~~~~~ 583 (587)
T 3qf4_A 565 LEHCKPYREIYESQFGNGV 583 (587)
T ss_dssp HHHCHHHHHHHHHHC----
T ss_pred HHCCCHHHHHHHHHHCCCC
T ss_conf 8678399999999846566
No 6
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=728.42 Aligned_cols=572 Identities=29% Similarity=0.418 Sum_probs=499.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 17887665479799999999999998987879999999999985187502334787999999999999999999999999
Q 000751 715 SFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHF 794 (1303)
Q Consensus 715 ~~~~l~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 794 (1303)
.+++++.+.++.++.+.++.++.++.+++.++.+++++.+++....... ......+.++++++.++..++.+++.+
T Consensus 24 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (598)
T 3qf4_B 24 TLRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRR----FDLLPRYMLILGTIYALTSLLFWLQGK 99 (598)
T ss_dssp HHHHHGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC----GGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999999973688----899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999980994330014677346999998139999999999899999999999999999999979
Q 000751 795 YFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEW 874 (1303)
Q Consensus 795 ~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~i~~~~~~~~ 874 (1303)
+..+.+.++..++|.++|++++++|+.||++ +++|++++|+++|++.++..+...+..++..+..+++++++++.++|
T Consensus 100 ~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 177 (598)
T 3qf4_B 100 IMLTLSQDVVFRLRKELFEKLQRVPVGFFDR--TPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNV 177 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCTHHHHH--SCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999997799999768--88899999999999999999999999999999999999999999989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999977889999999999999999994199999813518999999999999999999999
Q 000751 875 RLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHG 954 (1303)
Q Consensus 875 ~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1303)
++++++++.+|+.++......+..++..++.++...+....+.|.+.|+++||+|+.++.+.++|.+..++..+...+..
T Consensus 178 ~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 257 (598)
T 3qf4_B 178 ILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQ 257 (598)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999973799999748709999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999999999996986338659788999999999999997888864999999999999999998129
Q 000751 955 MAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRV 1034 (1303)
Q Consensus 955 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1303)
...+....+...+..+..+++++++++++..|.+++|.++.++.+......++.........+.++..++.|+.++++.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~ 337 (598)
T 3qf4_B 258 IFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLE 337 (598)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999999999859978999999999999999999999999999999999999999997688
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 99899999898999976628997558987999985201101588638979999827999868899987056658865899
Q 000751 1035 PKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVL 1114 (1303)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~ 1114 (1303)
++.+. ......+...+.|+++||+|+|+++ .++|+|+||++++||++|||||||||||||+++|+|+|+|++|+|.
T Consensus 338 ~~~~~--~~~~~~~~~~~~i~~~~v~~~y~~~--~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~ 413 (598)
T 3qf4_B 338 EEKDD--PDAVELREVRGEIEFKNVWFSYDKK--KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQIL 413 (598)
T ss_dssp CCCCC--SSCCCCCSCCCCEEEEEEECCSSSS--SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEE
T ss_pred CCCCC--CCCCCCCCCCCEEEEEEEEEECCCC--CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEE
T ss_conf 77777--7777777777718999989977999--8601222799869988999899999699999999458579980899
Q ss_pred ECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 99960799997876413688836786672128999971888999999999999952699998199986642378888889
Q 000751 1115 LDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLT 1194 (1303)
Q Consensus 1115 idG~di~~~~~~~lR~~i~~V~Q~p~Lf~gTIreNI~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1194 (1303)
+||+|+++++.+.+|++++||||+|++|++||+|||.++.++.++++++++++.++++++++.+|+|++|.+|++|.+||
T Consensus 414 ~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LS 493 (598)
T 3qf4_B 414 VDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLS 493 (598)
T ss_dssp ETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSC
T ss_pred ECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCC
T ss_conf 99998301889999841089907982324639999744799999999999999969788897464532364227889879
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECC
Q ss_conf 58999999999970399999984778999989899999999984419929999833901674059899996989988349
Q 000751 1195 PGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1195 GGQkQRiaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~aD~Iivl~~G~Ive~Gt 1274 (1303)
||||||++||||++++|+||+||||||+||+++++.+++.+++... ++|+|+||||+++++.||+|++|++|+|+|.|+
T Consensus 494 gGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 572 (598)
T 3qf4_B 494 QGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLME-GKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGK 572 (598)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHT-TSEEEEESCCTTHHHHCSEEEEECSSSEEECSC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCEEEEEECCHHHHHCCCEEEEEECCEEEEECC
T ss_conf 9999999999999649999999897667999999999999999808-998999942778997199899998999998778
Q ss_pred HHHHHHCCCHHHHHHHHHHHCCC
Q ss_conf 57896407066998745520444
Q 000751 1275 HDSLLAKNGLYVRLMQPHYGKGL 1297 (1303)
Q Consensus 1275 ~~eLl~~~g~y~~l~~~q~~~~~ 1297 (1303)
|+||++++|.|++++..|.+...
T Consensus 573 ~~~l~~~~~~~~~~~~~~~~~~~ 595 (598)
T 3qf4_B 573 HDELIQKRGFYYELFTSQYGLVV 595 (598)
T ss_dssp HHHHHHTTCHHHHHHHHHHGGGG
T ss_pred HHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 99998678779999999764652
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=724.06 Aligned_cols=572 Identities=29% Similarity=0.418 Sum_probs=493.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 887665479799999999999998987879999999999985187502---33478799999999999999999999999
Q 000751 717 WRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEER---HHLREEVNKWCLIIACMGVVTVVANFLQH 793 (1303)
Q Consensus 717 ~~l~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 793 (1303)
++++.+.++.++.+.++.++.++..++.++.+++++..++........ .........+...++++.++..++.+++.
T Consensus 3 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (578)
T 4a82_A 3 KRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQ 82 (578)
T ss_dssp HHHHHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999988999999999999999999999999999999999981687114677888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998099433001467734699999813999999999989999999999999999999997
Q 000751 794 FYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLE 873 (1303)
Q Consensus 794 ~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~i~~~~~~~ 873 (1303)
+...+.+.++..++|.++|++++++|++||++ +++|++++|+++|++.++..+...+..++.....+++++++++.++
T Consensus 83 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 160 (578)
T 4a82_A 83 YLAQWTSNKILYDIRKKLYNHLQALSARFYAN--NQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLD 160 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHT--SCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999998789999768--9869999999999999999999999999999999999999999996
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999997788999999999999999999419999981351899999999999999999999
Q 000751 874 WRLALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLH 953 (1303)
Q Consensus 874 ~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~ 953 (1303)
|+++++.++.+|++++......+..++..++......+....+.|.+.|+++||+|+.++.+.++|.+..++..+...+.
T Consensus 161 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (578)
T 4a82_A 161 VKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH 240 (578)
T ss_dssp TTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999998249999981664999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999999999999999698633865978899999999999999788886499999999999999999812
Q 000751 954 GMAIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDR 1033 (1303)
Q Consensus 954 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1303)
....+...++...+..+..+++++++++++..|.+++|.++.+..++.....++.........+.++..++.|++++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 320 (578)
T 4a82_A 241 TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDE 320 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985995899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
Q ss_conf 99989999989899997662899755898799998520110158863897999982799986889998705665886589
Q 000751 1034 VPKIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQV 1113 (1303)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I 1113 (1303)
+++.+.. ......+...+.|+++||+|+|++. +.++|+|+||+|++||++|||||||||||||+++|.|+|+|++|+|
T Consensus 321 ~~~~~~~-~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i 398 (578)
T 4a82_A 321 DYDIKNG-VGAQPIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQI 398 (578)
T ss_dssp CCSSCCC-TTCCCCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEE
T ss_pred CCCCCCC-CCCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEE
T ss_conf 9766678-7766667778807999999975899-9741343379987999999989999859999999846788999679
Q ss_pred EECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99996079999787641368883678667212899997188899999999999995269999819998664237888888
Q 000751 1114 LLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDL 1193 (1303)
Q Consensus 1114 ~idG~di~~~~~~~lR~~i~~V~Q~p~Lf~gTIreNI~~g~~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1193 (1303)
.+||+|+++++.+++|++++||||+|++|++|++|||.+|.++.++++++++++.++++++++.+|+|+||.+|++|.+|
T Consensus 399 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~L 478 (578)
T 4a82_A 399 LIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKL 478 (578)
T ss_dssp EETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTS
T ss_pred EECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCC
T ss_conf 99999844278999960068992898347645999985279998899999999880959999757330102530688967
Q ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEEC
Q ss_conf 95899999999997039999998477899998989999999998441992999983390167405989999698998834
Q 000751 1194 TPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEG 1273 (1303)
Q Consensus 1194 SGGQkQRiaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~aD~Iivl~~G~Ive~G 1273 (1303)
|||||||++||||++++|+|++||||||+||+++++.+++.+++... ++|+|+||||+++++.||+|++|++|+++|.|
T Consensus 479 SgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 557 (578)
T 4a82_A 479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSK-DRTTLIVAHRLSTITHADKIVVIENGHIVETG 557 (578)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTT-TSEEEEECSSGGGTTTCSEEEEEETTEEEEEE
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 99999999999999749999999786545799999999999999808-99799983178999719989999899899988
Q ss_pred CHHHHHHCCCHHHHHHHHHH
Q ss_conf 95789640706699874552
Q 000751 1274 THDSLLAKNGLYVRLMQPHY 1293 (1303)
Q Consensus 1274 t~~eLl~~~g~y~~l~~~q~ 1293 (1303)
+|+||++++|.|++++..|.
T Consensus 558 ~~~el~~~~~~~~~~~~~q~ 577 (578)
T 4a82_A 558 THRELIAKQGAYEHLYSIQN 577 (578)
T ss_dssp CHHHHHHTTSHHHHHHTTTT
T ss_pred CHHHHHHCCCHHHHHHHHHC
T ss_conf 89999858838999998506
No 8
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=707.91 Aligned_cols=576 Identities=30% Similarity=0.486 Sum_probs=488.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88766547979999999999999898787999999999998518750233478799999999999999999999999999
Q 000751 717 WRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFYF 796 (1303)
Q Consensus 717 ~~l~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 796 (1303)
++++.+.++.++.+.++.++.++..++.++.+++++.+++........ ........+...++++.++..++.+++.++.
T Consensus 8 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (595)
T 2yl4_A 8 RKLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTV-DYSDNLTRLCLGLSAVFLCGAAANAIRVYLM 86 (595)
T ss_dssp HHHHHHHGGGHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTS-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999887899999999999999999999999999999999735740-2667999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998099433001467734699999813999999999989999999999999999999997999
Q 000751 797 GIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWRL 876 (1303)
Q Consensus 797 ~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~i~~~~~~~~~l 876 (1303)
.+.+.++..++|.++|++++++|+.||++ +++|++++|+++|++.++..+...+..++..++.+++.+++++.++|++
T Consensus 87 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l 164 (595)
T 2yl4_A 87 QTSGQRIVNRLRTSLFSSILRQEVAFFDK--TRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNL 164 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHHH--SCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998199999777--9848899999999999999999999999999999999999999981999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999997788999999999999999999419999981351899999999999999999999999
Q 000751 877 ALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGMA 956 (1303)
Q Consensus 877 ~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 956 (1303)
++++++.+|++++......+..++..++.++...+....+.|.+.|+++||+|+.++++.++|.+..++..+...+....
T Consensus 165 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 244 (595)
T 2yl4_A 165 ATFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFA 244 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998119999983756999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999999999999999698633865978899999999999999788886499999999999999999812999
Q 000751 957 IGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPK 1036 (1303)
Q Consensus 957 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1303)
.....++...+..+..+++++++++++..|.+++|.++.+..+......++.........+.++..++.|++++++.+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~ 324 (595)
T 2yl4_A 245 RAGFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPK 324 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999999999986997899999999999999999999999999999999999999999838976
Q ss_pred CCCCCCCCCCCCCCCCC-EEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 89999989899997662-89975589879999852011015886389799998279998688999870566588658999
Q 000751 1037 IDPDDSSAVKPPNVYGS-IELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLL 1115 (1303)
Q Consensus 1037 ~~~~~~~~~~~~~~~g~-I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~i 1115 (1303)
.+.. .....++...+. |+++||+|+|+++++.++|+|+||++++||++|||||||||||||+++|.|+++|++|+|.+
T Consensus 325 ~~~~-~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~ 403 (595)
T 2yl4_A 325 LPFN-EGVILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISL 403 (595)
T ss_dssp SCSS-CSBCCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEE
T ss_pred CCCC-CCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf 6777-787777678998389998899858998881201127998499889998999997999999982585789837999
Q ss_pred CCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCC---CCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 99607999978764136888367866721289999718889---999999999999526999981999866423788888
Q 000751 1116 DGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHN---ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVD 1192 (1303)
Q Consensus 1116 dG~di~~~~~~~lR~~i~~V~Q~p~Lf~gTIreNI~~g~~~---~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~ 1192 (1303)
||+|+++++.+.+|++++||||+|.+|++|++|||.++.+. .++++++++++.++++++++++|+|+||.+|++|.+
T Consensus 404 ~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~ 483 (595)
T 2yl4_A 404 DGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVL 483 (595)
T ss_dssp TTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCC
T ss_pred CCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99981117999997322898368832687799998405877665689999999998697999974732013501688786
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEE
Q ss_conf 89589999999999703999999847789999898999999999844199299998339016740598999969899883
Q 000751 1193 LTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEE 1272 (1303)
Q Consensus 1193 LSGGQkQRiaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~aD~Iivl~~G~Ive~ 1272 (1303)
||||||||++||||++++|+|++||||||+||+++++.+++.+++... ++|+|+||||+++++.||+|++|++|+++|.
T Consensus 484 LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 562 (595)
T 2yl4_A 484 LSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMD-GRTVLVIAHRLSTIKNANMVAVLDQGKITEY 562 (595)
T ss_dssp CCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHT-TSEEEEECCCHHHHHHSSEEEEEETTEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC-CCEEEEEECCHHHHHCCCEEEEEECCEEEEE
T ss_conf 899999999999999759999999886668998999999999999965-9979999468789975998999989989997
Q ss_pred CCHHHHHHC-CCHHHHHHHHHHHCCC
Q ss_conf 495789640-7066998745520444
Q 000751 1273 GTHDSLLAK-NGLYVRLMQPHYGKGL 1297 (1303)
Q Consensus 1273 Gt~~eLl~~-~g~y~~l~~~q~~~~~ 1297 (1303)
|+|+||+++ ++.|++++..|....-
T Consensus 563 g~~~~l~~~~~~~~~~~~~~q~~~~~ 588 (595)
T 2yl4_A 563 GKHEELLSKPNGIYRKLMNKQSFISA 588 (595)
T ss_dssp ECSCC------C--------------
T ss_pred CCHHHHHHCCCHHHHHHHHHHHCCCC
T ss_conf 88999974787299999997430254
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=704.52 Aligned_cols=568 Identities=27% Similarity=0.407 Sum_probs=490.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78876654797999999999999989878799999999999851875023347879999999999999999999999999
Q 000751 716 FWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFY 795 (1303)
Q Consensus 716 ~~~l~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 795 (1303)
+++++.+.++.++.+.++.++.++.+++.++.+++++.+++...... . ..........++++.++..++.++..++
T Consensus 13 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (582)
T 3b5x_A 13 FKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNA--E--SNFLRILPFMILGLMFVRGLSGFASSYC 88 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--C--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998899999999999999999999999999999999986468--6--6799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999809943300146773469999981399999999998999999999999999999999799
Q 000751 796 FGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWR 875 (1303)
Q Consensus 796 ~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~i~~~~~~~~~ 875 (1303)
..+.+.++..++|.++|++++++|+.||++ +++|++++|+++|++.++..+...+..++..++.+++.+++++.++|+
T Consensus 89 ~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~ 166 (582)
T 3b5x_A 89 LSWVSGNVVMQMRRRLFNHFMHMPVRFFDQ--ESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQ 166 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999998699999778--987899999998899999999999999999999999999999998299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999778899999999999999999941999998135189999999999999999999999
Q 000751 876 LALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGM 955 (1303)
Q Consensus 876 l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1303)
+++++++.+|+..+......+..++..++.++...+....+.|.+.|+++||+|+.++.+.++|.+..++..+...+...
T Consensus 167 l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 246 (582)
T 3b5x_A 167 LSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVS 246 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999951999997087599999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999999999999969863386597889999999999999978888649999999999999999981299
Q 000751 956 AIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVP 1035 (1303)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1303)
.......+...+..+..+++++++++.+..|.+++|.++.+..+......++.........+.++..++.|+.++++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 326 (582)
T 3b5x_A 247 AQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLET 326 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999999998599889999999999999999999999999999999999999999975897
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 98999998989999766289975589879999852011015886389799998279998688999870566588658999
Q 000751 1036 KIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLL 1115 (1303)
Q Consensus 1036 ~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~i 1115 (1303)
+.++ . ....+...+.|+++||+|+|++++ .++|+|+||++++||++|||||||||||||+++|.|+|+|++|+|.+
T Consensus 327 ~~~~-~--~~~~~~~~~~i~~~~v~~~y~~~~-~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~ 402 (582)
T 3b5x_A 327 ERDN-G--KYEAERVNGEVDVKDVTFTYQGKE-KPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICL 402 (582)
T ss_pred CCCC-C--CCCCCCCCCEEEEEEEEEECCCCC-CCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf 6777-7--777777888289999899728998-65400416998799989998999997999999996577899987989
Q ss_pred CCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCC-CCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 996079999787641368883678667212899997188-8999999999999952699998199986642378888889
Q 000751 1116 DGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYAR-HNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLT 1194 (1303)
Q Consensus 1116 dG~di~~~~~~~lR~~i~~V~Q~p~Lf~gTIreNI~~g~-~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1194 (1303)
||+|+++++...+|++++||||+|.+|++|++|||.++. ++.++++++++++.++++++++++|+|+||.++++|.+||
T Consensus 403 ~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LS 482 (582)
T 3b5x_A 403 DGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLS 482 (582)
T ss_pred CCEEHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCC
T ss_conf 99985638899996485898279905310299998566889999999999999879899998476533451068888479
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECC
Q ss_conf 58999999999970399999984778999989899999999984419929999833901674059899996989988349
Q 000751 1195 PGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1195 GGQkQRiaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~aD~Iivl~~G~Ive~Gt 1274 (1303)
||||||++||||++++|+|++||||||+||+++++.+++.+++... ++|+|+||||+++++.||+|++|++|++++.|+
T Consensus 483 gGq~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 561 (582)
T 3b5x_A 483 GGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQK-NKTVLVIAHRLSTIEQADEILVVDEGEIIERGR 561 (582)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
T ss_conf 9999999999999749999999785446899999999999999728-998999936889998199899998998999778
Q ss_pred HHHHHHCCCHHHHHHHHHHH
Q ss_conf 57896407066998745520
Q 000751 1275 HDSLLAKNGLYVRLMQPHYG 1294 (1303)
Q Consensus 1275 ~~eLl~~~g~y~~l~~~q~~ 1294 (1303)
|+||+++++.|+++++.|..
T Consensus 562 ~~~l~~~~~~~~~~~~~q~~ 581 (582)
T 3b5x_A 562 HADLLAQDGAYAQLHRIQFG 581 (582)
T ss_pred HHHHHHCCCHHHHHHHHHHC
T ss_conf 99998488589999998612
No 10
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=703.12 Aligned_cols=568 Identities=29% Similarity=0.444 Sum_probs=489.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78876654797999999999999989878799999999999851875023347879999999999999999999999999
Q 000751 716 FWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLIVTAYYKPEERHHLREEVNKWCLIIACMGVVTVVANFLQHFY 795 (1303)
Q Consensus 716 ~~~l~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 795 (1303)
+++++.+.++.++.+.++.++.++.+++.++.+++++.+++...... . ..........++++.++..++.+++.++
T Consensus 13 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (582)
T 3b60_A 13 FRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKT--D--RSVLLWMPLVVIGLMILRGITSYISSYC 88 (582)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTST--T--HHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--C--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999884368--6--5799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999809943300146773469999981399999999998999999999999999999999799
Q 000751 796 FGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGMLLEWR 875 (1303)
Q Consensus 796 ~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~i~~~~~~~~~ 875 (1303)
..+.+.++..++|.++|++++++|+.||++ +++|++++|+++|++.++..+...+..++..++.+++.+++++.++|+
T Consensus 89 ~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~ 166 (582)
T 3b60_A 89 ISWVSGKVVMTMRRRLFGHMMGMPVAFFDK--QSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQ 166 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCSTHHHH--SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999998099999788--986589999998799999999999999999999999999999998099
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999778899999999999999999941999998135189999999999999999999999
Q 000751 876 LALVALATLPILSLSAIAQKLWLAGFSRGIQKMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTKSFLHGM 955 (1303)
Q Consensus 876 l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~i~gi~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1303)
+++++++.+|++.+......+..++..++.++...+....+.|.+.|+++||+|+.++.+.++|.+..++..+...+...
T Consensus 167 l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 246 (582)
T 3b60_A 167 LSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVS 246 (582)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999961999998376899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999999999999969863386597889999999999999978888649999999999999999981299
Q 000751 956 AIGFAFGFSQFLLFACNALLLWYTGKSVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVP 1035 (1303)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1303)
.......+..++..+..+++++++++.+..|.+++|.++.+..+......++.........+.++..++.|+.++++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 326 (582)
T 3b60_A 247 ASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQ 326 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999999998499989999999999999999999999999999999999999999975998
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 98999998989999766289975589879999852011015886389799998279998688999870566588658999
Q 000751 1036 KIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLL 1115 (1303)
Q Consensus 1036 ~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~i 1115 (1303)
+.+. . ....+...+.|+++||+|+|+++. .++|+|+||++++||++||+||||||||||+++|.|+|+|++|+|.+
T Consensus 327 ~~~~-~--~~~~~~~~~~i~~~~v~~~y~~~~-~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~ 402 (582)
T 3b60_A 327 EKDE-G--KRVIDRATGDLEFRNVTFTYPGRE-VPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILM 402 (582)
T ss_dssp SCCC-C--CBCCSCCCCCEEEEEEEECSSSSS-CCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEE
T ss_pred CCCC-C--CCCCCCCCCCEEEEEEEEECCCCC-CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEE
T ss_conf 7667-7--777778888479998899739999-74415615997699989998999998999999986106898976979
Q ss_pred CCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCC-CCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 996079999787641368883678667212899997188-8999999999999952699998199986642378888889
Q 000751 1116 DGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYAR-HNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLT 1194 (1303)
Q Consensus 1116 dG~di~~~~~~~lR~~i~~V~Q~p~Lf~gTIreNI~~g~-~~~~~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1194 (1303)
||+|+++++...+|++++||||+|.+|++|++|||.++. ++.++++++++++.++++++++++|+|+||.++++|.+||
T Consensus 403 ~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LS 482 (582)
T 3b60_A 403 DGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLS 482 (582)
T ss_dssp TTEETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSC
T ss_pred CCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 99982306999999608088068747787899998545999989999999999849799998450411451147988789
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECC
Q ss_conf 58999999999970399999984778999989899999999984419929999833901674059899996989988349
Q 000751 1195 PGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGT 1274 (1303)
Q Consensus 1195 GGQkQRiaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~~TvI~IaHrl~ti~~aD~Iivl~~G~Ive~Gt 1274 (1303)
||||||++||||++++|+|++||||||+||+++++.+++.+++... ++|+|+||||+++++.||+|++|++|++++.|+
T Consensus 483 gGq~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 561 (582)
T 3b60_A 483 GGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQK-NRTSLVIAHRLSTIEQADEIVVVEDGIIVERGT 561 (582)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHT-TSEEEEECSCGGGTTTCSEEEEEETTEEEEEEC
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC-CCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
T ss_conf 9999999999999728998999786555798999999999999967-997999945477898599899997888988458
Q ss_pred HHHHHHCCCHHHHHHHHHHH
Q ss_conf 57896407066998745520
Q 000751 1275 HDSLLAKNGLYVRLMQPHYG 1294 (1303)
Q Consensus 1275 ~~eLl~~~g~y~~l~~~q~~ 1294 (1303)
|+||+++++.|+++++.|..
T Consensus 562 ~~~l~~~~~~~~~~~~~q~~ 581 (582)
T 3b60_A 562 HSELLAQHGVYAQLHKMQFG 581 (582)
T ss_dssp HHHHHHHTSSHHHHHHHTCC
T ss_pred HHHHHHCCCHHHHHHHHHCC
T ss_conf 99998769889999997502
Done!