Query 000753
Match_columns 1302
No_of_seqs 859 out of 5806
Neff 7.6
Searched_HMMs 46136
Date Mon Apr 1 23:08:15 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000753.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000753hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 3E-227 6E-232 2082.3 85.8 1192 51-1301 12-1224(1391)
2 PLN03140 ABC transporter G fam 100.0 1E-208 3E-213 2056.3 126.2 1277 4-1299 3-1313(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 4E-162 8E-167 1620.0 115.7 1137 113-1299 3-1195(1394)
4 KOG0061 Transporter, ABC super 100.0 6.3E-82 1.4E-86 782.5 58.6 587 133-797 21-608 (613)
5 TIGR00955 3a01204 The Eye Pigm 100.0 3E-81 6.5E-86 786.3 59.0 572 181-796 35-612 (617)
6 PLN03211 ABC transporter G-25; 100.0 9.6E-80 2.1E-84 771.1 62.8 609 133-797 35-658 (659)
7 PLN03140 ABC transporter G fam 100.0 2.1E-78 4.6E-83 807.8 64.0 600 130-798 860-1467(1470)
8 KOG0055 Multidrug/pheromone ex 100.0 1.2E-75 2.7E-80 731.7 59.0 774 178-1093 360-1209(1228)
9 KOG0065 Pleiotropic drug resis 100.0 8.7E-76 1.9E-80 730.2 32.8 565 182-797 802-1383(1391)
10 TIGR00956 3a01205 Pleiotropic 100.0 1.9E-72 4.2E-77 754.8 61.2 562 183-796 775-1389(1394)
11 TIGR01257 rim_protein retinal- 100.0 3.5E-70 7.6E-75 727.5 71.7 217 854-1093 1937-2155(2272)
12 KOG0054 Multidrug resistance-a 100.0 5.9E-72 1.3E-76 715.9 49.1 758 185-1094 535-1359(1381)
13 PLN03130 ABC transporter C fam 100.0 1.9E-67 4.2E-72 713.1 65.6 213 853-1094 1236-1458(1622)
14 PLN03232 ABC transporter C fam 100.0 7.5E-67 1.6E-71 708.1 63.7 212 853-1093 1233-1454(1495)
15 KOG0061 Transporter, ABC super 100.0 1.7E-68 3.7E-73 662.6 39.2 424 851-1299 22-455 (613)
16 COG1123 ATPase components of v 100.0 1.5E-65 3.3E-70 604.2 48.4 474 184-1092 22-514 (539)
17 PTZ00265 multidrug resistance 100.0 5.1E-65 1.1E-69 683.3 59.6 217 853-1092 1164-1447(1466)
18 PLN03211 ABC transporter G-25; 100.0 3.8E-66 8.3E-71 648.4 45.2 434 851-1299 36-504 (659)
19 TIGR00957 MRP_assoc_pro multi 100.0 2.9E-64 6.3E-69 683.8 60.1 212 853-1093 1283-1504(1522)
20 PRK13549 xylose transporter AT 100.0 2.1E-64 4.5E-69 623.1 48.7 461 184-1095 18-492 (506)
21 PRK10762 D-ribose transporter 100.0 3.8E-64 8.3E-69 620.0 47.9 450 184-1094 17-481 (501)
22 TIGR00955 3a01204 The Eye Pigm 100.0 7.9E-65 1.7E-69 637.8 42.2 411 879-1299 37-458 (617)
23 PRK09700 D-allose transporter 100.0 2.6E-64 5.6E-69 623.3 46.2 458 184-1092 18-493 (510)
24 PRK10261 glutathione transport 100.0 1E-63 2.2E-68 628.4 50.4 488 184-1093 29-549 (623)
25 PTZ00243 ABC transporter; Prov 100.0 6E-63 1.3E-67 668.8 61.1 212 853-1093 1307-1529(1560)
26 PRK15439 autoinducer 2 ABC tra 100.0 1.8E-63 3.8E-68 614.5 48.2 454 184-1094 24-489 (510)
27 TIGR01271 CFTR_protein cystic 100.0 2.9E-62 6.2E-67 662.2 64.5 211 853-1093 1216-1436(1490)
28 TIGR03269 met_CoM_red_A2 methy 100.0 2.6E-63 5.6E-68 615.8 48.2 445 184-1092 13-512 (520)
29 PRK15134 microcin C ABC transp 100.0 2.2E-63 4.7E-68 617.3 47.3 464 184-1092 22-510 (529)
30 TIGR02633 xylG D-xylose ABC tr 100.0 8.4E-63 1.8E-67 608.7 48.8 459 184-1092 14-487 (500)
31 PRK11288 araG L-arabinose tran 100.0 8.1E-63 1.7E-67 608.2 47.0 451 184-1094 17-482 (501)
32 PRK10982 galactose/methyl gala 100.0 8.6E-62 1.9E-66 598.0 46.2 449 184-1092 11-475 (491)
33 PRK10938 putative molybdenum t 100.0 1.4E-60 3E-65 587.6 42.4 447 184-1089 16-484 (490)
34 PRK11819 putative ABC transpor 100.0 2E-57 4.4E-62 565.8 52.6 201 854-1091 324-527 (556)
35 COG4172 ABC-type uncharacteriz 100.0 8.2E-58 1.8E-62 504.7 42.2 470 182-1092 21-511 (534)
36 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 8.8E-58 1.9E-62 569.1 46.4 201 854-1091 322-525 (552)
37 PRK15064 ABC transporter ATP-b 100.0 1.7E-57 3.8E-62 564.6 48.5 198 854-1092 319-520 (530)
38 PRK13409 putative ATPase RIL; 100.0 5.9E-56 1.3E-60 550.0 41.9 211 854-1106 340-554 (590)
39 PRK10636 putative ABC transpor 100.0 3.7E-54 8.1E-59 541.9 51.8 197 854-1092 312-512 (638)
40 PRK11147 ABC transporter ATPas 100.0 5.1E-54 1.1E-58 542.2 52.4 202 854-1092 319-523 (635)
41 COG1129 MglA ABC-type sugar tr 100.0 6.5E-54 1.4E-58 502.8 43.9 452 181-1091 18-484 (500)
42 PLN03073 ABC transporter F fam 100.0 2.2E-51 4.9E-56 517.4 49.3 200 854-1092 508-709 (718)
43 COG0488 Uup ATPase components 100.0 5.6E-51 1.2E-55 492.0 43.2 222 182-433 14-240 (530)
44 COG3845 ABC-type uncharacteriz 100.0 2.5E-49 5.4E-54 453.1 38.1 458 182-1093 15-488 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 5.4E-45 1.2E-49 377.1 20.8 206 876-1092 11-220 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 1.9E-43 4E-48 365.8 19.8 222 182-454 13-238 (240)
47 KOG0927 Predicted transporter 100.0 8.5E-42 1.8E-46 391.5 31.9 203 852-1092 387-591 (614)
48 COG1135 AbcC ABC-type metal io 100.0 2.9E-42 6.2E-47 374.2 19.2 203 879-1093 18-227 (339)
49 COG1127 Ttg2A ABC-type transpo 100.0 6E-42 1.3E-46 359.9 19.4 222 876-1108 17-250 (263)
50 COG1131 CcmA ABC-type multidru 100.0 8.5E-42 1.8E-46 389.8 22.3 205 876-1092 13-221 (293)
51 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.7E-41 3.8E-46 368.4 21.4 218 854-1094 4-224 (254)
52 COG1120 FepC ABC-type cobalami 100.0 1.4E-41 2.9E-46 371.4 19.3 218 855-1094 3-225 (258)
53 COG1116 TauB ABC-type nitrate/ 100.0 1.5E-41 3.3E-46 363.3 18.4 203 855-1083 4-207 (248)
54 COG1125 OpuBA ABC-type proline 100.0 1.3E-41 2.7E-46 358.0 17.1 205 877-1093 11-221 (309)
55 COG3839 MalK ABC-type sugar tr 100.0 3.3E-41 7.2E-46 381.9 20.2 217 186-453 18-235 (338)
56 COG1135 AbcC ABC-type metal io 100.0 5.7E-41 1.2E-45 364.1 20.8 224 182-456 17-246 (339)
57 COG1131 CcmA ABC-type multidru 100.0 7.4E-41 1.6E-45 382.1 22.9 212 183-437 17-230 (293)
58 COG4555 NatA ABC-type Na+ tran 100.0 1.7E-41 3.6E-46 345.6 14.9 202 880-1093 15-218 (245)
59 COG3638 ABC-type phosphate/pho 100.0 4.5E-41 9.7E-46 352.5 18.0 222 854-1096 3-236 (258)
60 COG1136 SalX ABC-type antimicr 100.0 1.1E-40 2.3E-45 357.5 20.8 193 880-1085 18-219 (226)
61 COG3842 PotA ABC-type spermidi 100.0 9.4E-41 2E-45 380.2 19.2 223 183-455 17-240 (352)
62 COG1120 FepC ABC-type cobalami 100.0 1.9E-40 4E-45 362.5 18.4 211 183-432 14-227 (258)
63 COG1125 OpuBA ABC-type proline 100.0 3.6E-40 7.9E-45 347.0 19.7 209 182-433 12-225 (309)
64 COG1118 CysA ABC-type sulfate/ 100.0 2E-40 4.2E-45 358.8 17.5 207 878-1094 13-224 (345)
65 COG1118 CysA ABC-type sulfate/ 100.0 3.3E-40 7.2E-45 357.0 18.8 224 182-454 13-240 (345)
66 COG2884 FtsE Predicted ATPase 100.0 6E-40 1.3E-44 331.8 18.8 212 855-1091 2-220 (223)
67 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.9E-39 4.1E-44 352.5 24.1 207 185-433 18-227 (254)
68 COG3839 MalK ABC-type sugar tr 100.0 3E-40 6.5E-45 374.2 18.3 201 882-1094 18-220 (338)
69 COG1127 Ttg2A ABC-type transpo 100.0 1.2E-39 2.5E-44 342.7 20.6 210 182-433 19-235 (263)
70 COG1117 PstB ABC-type phosphat 100.0 6.5E-40 1.4E-44 337.3 18.0 218 854-1092 7-232 (253)
71 COG1116 TauB ABC-type nitrate/ 100.0 1.4E-39 3.1E-44 348.1 20.5 194 184-422 16-211 (248)
72 COG3638 ABC-type phosphate/pho 100.0 1.6E-39 3.5E-44 340.7 19.1 217 182-433 15-237 (258)
73 COG3842 PotA ABC-type spermidi 100.0 7.6E-40 1.6E-44 372.8 18.1 207 877-1094 15-223 (352)
74 COG4555 NatA ABC-type Na+ tran 100.0 8.7E-40 1.9E-44 333.0 15.6 209 181-433 12-222 (245)
75 PRK13537 nodulation ABC transp 100.0 6.4E-39 1.4E-43 369.7 24.9 214 854-1092 7-222 (306)
76 COG1136 SalX ABC-type antimicr 100.0 9E-39 2E-43 342.7 22.5 195 184-422 18-220 (226)
77 KOG0058 Peptide exporter, ABC 100.0 1E-38 2.2E-43 380.9 21.5 214 178-433 475-691 (716)
78 TIGR02314 ABC_MetN D-methionin 100.0 2.6E-38 5.7E-43 367.3 24.4 218 855-1093 2-226 (343)
79 COG1137 YhbG ABC-type (unclass 100.0 2.1E-39 4.6E-44 329.8 12.9 210 874-1093 11-224 (243)
80 TIGR01257 rim_protein retinal- 100.0 1.4E-35 3E-40 397.3 53.1 216 853-1092 927-1144(2272)
81 cd03261 ABC_Org_Solvent_Resist 100.0 3.5E-38 7.6E-43 351.6 21.1 202 880-1092 13-221 (235)
82 COG3840 ThiQ ABC-type thiamine 100.0 3.1E-38 6.7E-43 316.3 18.3 201 189-432 17-218 (231)
83 TIGR02314 ABC_MetN D-methionin 100.0 1.6E-37 3.4E-42 360.9 26.9 206 184-432 18-229 (343)
84 TIGR03265 PhnT2 putative 2-ami 100.0 6.9E-38 1.5E-42 366.5 23.8 215 854-1093 4-220 (353)
85 PRK11650 ugpC glycerol-3-phosp 100.0 8.3E-38 1.8E-42 366.2 24.5 206 184-432 17-223 (356)
86 TIGR01188 drrA daunorubicin re 100.0 5.7E-38 1.2E-42 362.2 22.7 202 879-1092 5-208 (302)
87 KOG0058 Peptide exporter, ABC 100.0 8.4E-37 1.8E-41 364.6 33.2 223 845-1092 455-686 (716)
88 PRK11650 ugpC glycerol-3-phosp 100.0 4.9E-38 1.1E-42 368.1 21.9 215 855-1093 4-220 (356)
89 PRK11432 fbpC ferric transport 100.0 8.6E-38 1.9E-42 365.0 23.7 215 854-1093 6-222 (351)
90 TIGR03265 PhnT2 putative 2-ami 100.0 1.1E-37 2.3E-42 364.9 24.3 207 184-433 17-224 (353)
91 PRK11432 fbpC ferric transport 100.0 1.2E-37 2.6E-42 363.8 24.4 206 184-432 19-225 (351)
92 COG1117 PstB ABC-type phosphat 100.0 3E-38 6.5E-43 325.1 16.6 222 183-452 19-248 (253)
93 TIGR03258 PhnT 2-aminoethylpho 100.0 1.2E-37 2.5E-42 365.0 23.9 215 854-1093 5-224 (362)
94 PRK13536 nodulation factor exp 100.0 9.5E-38 2.1E-42 363.5 23.0 215 854-1093 41-257 (340)
95 TIGR01186 proV glycine betaine 100.0 2.1E-37 4.5E-42 361.6 25.1 208 183-433 5-219 (363)
96 COG1124 DppF ABC-type dipeptid 100.0 4.1E-38 9E-43 333.2 17.0 216 855-1093 4-227 (252)
97 COG2274 SunT ABC-type bacterio 100.0 1.3E-37 2.7E-42 387.7 23.9 207 185-433 487-696 (709)
98 TIGR00960 3a0501s02 Type II (G 100.0 1.7E-37 3.6E-42 341.7 21.7 208 855-1085 2-215 (216)
99 COG1122 CbiO ABC-type cobalt t 100.0 9.5E-38 2.1E-42 341.9 19.5 214 855-1092 4-223 (235)
100 cd03259 ABC_Carb_Solutes_like 100.0 1.7E-37 3.6E-42 340.9 21.3 199 880-1090 13-213 (213)
101 TIGR01288 nodI ATP-binding ABC 100.0 3.5E-37 7.6E-42 355.8 24.8 214 854-1092 4-219 (303)
102 PRK09452 potA putrescine/sperm 100.0 3.1E-37 6.8E-42 362.6 24.6 218 184-452 27-245 (375)
103 TIGR03258 PhnT 2-aminoethylpho 100.0 2.6E-37 5.7E-42 362.0 23.7 206 184-432 18-227 (362)
104 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.9E-37 6.4E-42 340.7 22.3 200 880-1092 17-218 (220)
105 TIGR01186 proV glycine betaine 100.0 2.6E-37 5.6E-42 360.8 23.0 204 878-1093 4-215 (363)
106 PRK13537 nodulation ABC transp 100.0 3.9E-37 8.5E-42 354.9 23.9 206 184-433 20-227 (306)
107 PRK09452 potA putrescine/sperm 100.0 4.4E-37 9.4E-42 361.3 24.4 215 854-1093 14-230 (375)
108 PRK10851 sulfate/thiosulfate t 100.0 2.5E-37 5.3E-42 361.8 22.2 217 855-1093 3-222 (353)
109 cd03265 ABC_DrrA DrrA is the A 100.0 3.2E-37 6.8E-42 340.4 21.6 202 879-1092 12-216 (220)
110 cd03269 ABC_putative_ATPase Th 100.0 4E-37 8.6E-42 337.2 21.4 198 880-1090 13-210 (210)
111 PRK11153 metN DL-methionine tr 100.0 6E-37 1.3E-41 358.6 24.4 218 855-1093 2-226 (343)
112 cd03301 ABC_MalK_N The N-termi 100.0 5.9E-37 1.3E-41 336.7 22.5 199 880-1090 13-213 (213)
113 COG3840 ThiQ ABC-type thiamine 100.0 1.3E-37 2.7E-42 312.0 15.5 197 885-1093 17-215 (231)
114 COG4152 ABC-type uncharacteriz 100.0 1.5E-37 3.2E-42 325.2 16.7 206 875-1093 10-215 (300)
115 PRK11607 potG putrescine trans 100.0 8.6E-37 1.9E-41 359.5 24.9 215 854-1093 19-235 (377)
116 TIGR03522 GldA_ABC_ATP gliding 100.0 5.4E-37 1.2E-41 353.6 22.3 213 855-1093 3-217 (301)
117 PRK11000 maltose/maltodextrin 100.0 7.8E-37 1.7E-41 360.4 24.0 214 855-1093 4-219 (369)
118 cd03296 ABC_CysA_sulfate_impor 100.0 1.1E-36 2.4E-41 340.4 23.8 216 855-1092 3-221 (239)
119 cd03261 ABC_Org_Solvent_Resist 100.0 1.4E-36 3.1E-41 338.6 24.6 207 184-432 13-225 (235)
120 cd03219 ABC_Mj1267_LivG_branch 100.0 8.2E-37 1.8E-41 340.9 22.6 204 880-1092 13-227 (236)
121 TIGR01188 drrA daunorubicin re 100.0 8.5E-37 1.9E-41 352.4 23.4 206 184-433 6-213 (302)
122 cd03266 ABC_NatA_sodium_export 100.0 6.8E-37 1.5E-41 337.4 21.3 198 881-1090 19-218 (218)
123 cd03294 ABC_Pro_Gly_Bertaine T 100.0 7.3E-37 1.6E-41 347.3 22.0 207 874-1092 31-245 (269)
124 PRK10851 sulfate/thiosulfate t 100.0 1.3E-36 2.9E-41 355.6 24.8 210 184-432 15-225 (353)
125 cd03218 ABC_YhbG The ABC trans 100.0 8.5E-37 1.8E-41 339.9 21.9 202 879-1092 12-217 (232)
126 cd03226 ABC_cobalt_CbiO_domain 100.0 5.3E-37 1.1E-41 334.9 19.6 192 880-1087 13-205 (205)
127 PRK11607 potG putrescine trans 100.0 1.4E-36 3E-41 357.8 24.6 206 184-432 32-238 (377)
128 PRK09536 btuD corrinoid ABC tr 100.0 6.2E-37 1.4E-41 361.8 21.6 217 855-1093 4-224 (402)
129 KOG0057 Mitochondrial Fe/S clu 100.0 1.4E-36 3.1E-41 350.5 23.6 229 129-433 343-574 (591)
130 COG0410 LivF ABC-type branched 100.0 5.1E-37 1.1E-41 322.9 18.1 207 875-1094 11-223 (237)
131 cd03234 ABCG_White The White s 100.0 2.3E-36 5E-41 334.9 24.4 221 855-1090 4-226 (226)
132 cd03260 ABC_PstB_phosphate_tra 100.0 9.9E-37 2.2E-41 338.2 21.3 202 880-1092 13-224 (227)
133 cd03268 ABC_BcrA_bacitracin_re 100.0 8.7E-37 1.9E-41 334.0 20.4 195 880-1090 13-208 (208)
134 cd03258 ABC_MetN_methionine_tr 100.0 1.3E-36 2.9E-41 338.5 22.1 200 881-1092 19-225 (233)
135 COG4988 CydD ABC-type transpor 100.0 1.7E-36 3.6E-41 356.4 23.8 206 185-433 335-543 (559)
136 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 8E-37 1.7E-41 336.8 19.9 193 880-1085 17-217 (218)
137 PRK13637 cbiO cobalt transport 100.0 1.9E-36 4.1E-41 346.7 23.7 218 855-1092 3-229 (287)
138 TIGR02673 FtsE cell division A 100.0 1.5E-36 3.3E-41 333.6 21.8 193 880-1083 15-213 (214)
139 cd03256 ABC_PhnC_transporter A 100.0 1.2E-36 2.7E-41 340.6 21.5 204 880-1092 14-229 (241)
140 PRK09493 glnQ glutamine ABC tr 100.0 2.6E-36 5.7E-41 337.7 24.0 202 880-1092 14-220 (240)
141 PRK11000 maltose/maltodextrin 100.0 2.5E-36 5.3E-41 356.2 24.7 206 184-432 16-222 (369)
142 PRK11264 putative amino-acid A 100.0 3E-36 6.5E-41 339.4 24.3 214 855-1092 4-228 (250)
143 PRK11629 lolD lipoprotein tran 100.0 3.7E-36 8.1E-41 334.8 24.7 217 854-1092 5-229 (233)
144 COG1137 YhbG ABC-type (unclass 100.0 2.1E-37 4.6E-42 315.3 13.3 211 181-433 14-228 (243)
145 cd03263 ABC_subfamily_A The AB 100.0 1.5E-36 3.2E-41 335.1 21.1 200 880-1092 15-216 (220)
146 COG1122 CbiO ABC-type cobalt t 100.0 1.1E-36 2.4E-41 333.5 19.6 207 184-433 17-228 (235)
147 PRK13536 nodulation factor exp 100.0 2.8E-36 6.1E-41 351.2 23.9 206 184-433 54-261 (340)
148 cd03292 ABC_FtsE_transporter F 100.0 2.3E-36 4.9E-41 332.3 21.7 194 880-1085 14-213 (214)
149 COG0411 LivG ABC-type branched 100.0 6.9E-37 1.5E-41 324.3 16.6 211 875-1094 12-236 (250)
150 COG0410 LivF ABC-type branched 100.0 3.6E-36 7.7E-41 316.6 21.8 208 182-433 14-226 (237)
151 COG2884 FtsE Predicted ATPase 100.0 1.7E-36 3.7E-41 306.8 18.4 202 182-427 13-220 (223)
152 PRK13651 cobalt transporter AT 100.0 3.3E-36 7.2E-41 346.4 23.2 219 855-1093 3-250 (305)
153 PRK13647 cbiO cobalt transport 100.0 3.8E-36 8.3E-41 342.1 23.3 215 854-1092 4-222 (274)
154 PRK11831 putative ABC transpor 100.0 5.3E-36 1.1E-40 340.4 24.3 215 854-1092 7-228 (269)
155 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3E-36 6.6E-41 337.5 21.9 201 880-1092 14-220 (242)
156 TIGR02315 ABC_phnC phosphonate 100.0 1.9E-36 4.1E-41 339.5 20.0 205 880-1093 15-231 (243)
157 COG1124 DppF ABC-type dipeptid 100.0 3E-36 6.6E-41 319.1 20.2 204 185-433 21-231 (252)
158 COG0411 LivG ABC-type branched 100.0 1.7E-36 3.6E-41 321.4 18.1 222 181-433 14-239 (250)
159 PRK11153 metN DL-methionine tr 100.0 6E-36 1.3E-40 350.1 24.7 206 184-432 18-229 (343)
160 PRK10908 cell division protein 100.0 5.3E-36 1.1E-40 331.2 22.9 209 855-1087 2-216 (222)
161 PRK13634 cbiO cobalt transport 100.0 4.7E-36 1E-40 344.0 23.2 217 855-1092 3-230 (290)
162 PRK13643 cbiO cobalt transport 100.0 5.6E-36 1.2E-40 343.0 23.8 218 855-1093 2-229 (288)
163 cd03224 ABC_TM1139_LivF_branch 100.0 2.7E-36 5.8E-41 333.6 20.3 199 880-1092 13-216 (222)
164 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 7.7E-36 1.7E-40 332.9 24.1 200 880-1092 14-216 (236)
165 cd03235 ABC_Metallic_Cations A 100.0 2.4E-36 5.2E-41 331.8 19.7 199 880-1090 12-213 (213)
166 COG2274 SunT ABC-type bacterio 100.0 1.4E-34 3E-39 360.5 37.9 218 848-1093 465-692 (709)
167 cd03225 ABC_cobalt_CbiO_domain 100.0 3.2E-36 6.9E-41 330.3 20.5 193 880-1083 14-210 (211)
168 PRK11248 tauB taurine transpor 100.0 4.3E-36 9.3E-41 338.1 22.1 200 880-1092 14-215 (255)
169 PRK13631 cbiO cobalt transport 100.0 5.8E-36 1.3E-40 346.4 23.7 218 854-1092 21-260 (320)
170 cd03257 ABC_NikE_OppD_transpor 100.0 6.2E-36 1.3E-40 332.1 22.9 200 881-1090 19-228 (228)
171 cd03265 ABC_DrrA DrrA is the A 100.0 6.8E-36 1.5E-40 329.8 22.9 205 184-431 13-219 (220)
172 PRK10619 histidine/lysine/argi 100.0 1E-35 2.2E-40 336.3 24.8 215 854-1092 5-236 (257)
173 cd03259 ABC_Carb_Solutes_like 100.0 6.6E-36 1.4E-40 328.3 22.6 200 184-426 13-213 (213)
174 cd03264 ABC_drug_resistance_li 100.0 4.2E-36 9E-41 329.4 20.9 197 880-1090 13-211 (211)
175 cd03262 ABC_HisP_GlnQ_permease 100.0 3.7E-36 8.1E-41 330.3 20.2 195 880-1085 13-212 (213)
176 PRK15079 oligopeptide ABC tran 100.0 1.1E-35 2.3E-40 345.5 25.1 230 854-1093 8-247 (331)
177 TIGR00972 3a0107s01c2 phosphat 100.0 1E-35 2.2E-40 334.2 24.2 202 880-1092 14-227 (247)
178 PRK13636 cbiO cobalt transport 100.0 8.8E-36 1.9E-40 340.8 23.8 216 854-1093 5-227 (283)
179 PRK10895 lipopolysaccharide AB 100.0 5.2E-36 1.1E-40 335.4 21.5 214 855-1092 4-221 (241)
180 cd03296 ABC_CysA_sulfate_impor 100.0 1.2E-35 2.5E-40 332.1 24.2 210 184-432 15-225 (239)
181 PRK13646 cbiO cobalt transport 100.0 7E-36 1.5E-40 342.1 22.8 217 855-1092 3-230 (286)
182 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.2E-35 2.6E-40 337.3 24.6 208 182-432 35-249 (269)
183 PRK13650 cbiO cobalt transport 100.0 6.5E-36 1.4E-40 341.1 22.2 216 854-1092 4-224 (279)
184 PRK13637 cbiO cobalt transport 100.0 1.3E-35 2.9E-40 339.7 24.7 218 184-444 20-248 (287)
185 PRK11247 ssuB aliphatic sulfon 100.0 8E-36 1.7E-40 335.5 22.2 206 854-1092 12-218 (257)
186 TIGR01288 nodI ATP-binding ABC 100.0 1.1E-35 2.4E-40 343.2 24.0 206 184-433 17-224 (303)
187 TIGR02211 LolD_lipo_ex lipopro 100.0 1E-35 2.3E-40 328.7 22.7 195 880-1087 18-220 (221)
188 COG4559 ABC-type hemin transpo 100.0 5.7E-36 1.2E-40 307.5 18.6 217 855-1094 2-227 (259)
189 PRK11174 cysteine/glutathione 100.0 1.2E-35 2.5E-40 374.9 25.6 207 184-433 363-572 (588)
190 cd03258 ABC_MetN_methionine_tr 100.0 1.4E-35 3.1E-40 330.2 23.4 205 185-432 19-229 (233)
191 PRK13650 cbiO cobalt transport 100.0 3.3E-35 7.1E-40 335.4 26.8 205 184-432 20-228 (279)
192 cd03219 ABC_Mj1267_LivG_branch 100.0 1.8E-35 3.9E-40 330.1 24.1 215 184-432 13-231 (236)
193 TIGR03005 ectoine_ehuA ectoine 100.0 1.5E-35 3.2E-40 334.0 23.4 202 880-1092 13-231 (252)
194 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.8E-35 3.9E-40 326.4 23.6 201 184-429 17-219 (220)
195 PRK13643 cbiO cobalt transport 100.0 2.6E-35 5.5E-40 337.6 25.3 223 185-452 20-255 (288)
196 cd03301 ABC_MalK_N The N-termi 100.0 1.8E-35 3.9E-40 324.9 23.1 200 184-426 13-213 (213)
197 PRK11614 livF leucine/isoleuci 100.0 1.1E-35 2.3E-40 332.1 21.5 213 854-1093 5-222 (237)
198 TIGR03740 galliderm_ABC gallid 100.0 1.3E-35 2.9E-40 328.2 22.1 198 880-1094 13-210 (223)
199 COG4988 CydD ABC-type transpor 100.0 3.1E-34 6.7E-39 337.3 34.6 215 851-1093 317-539 (559)
200 cd03256 ABC_PhnC_transporter A 100.0 1.8E-35 3.9E-40 331.3 23.1 214 184-432 14-233 (241)
201 TIGR03522 GldA_ABC_ATP gliding 100.0 1.8E-35 3.9E-40 341.0 23.7 205 184-433 15-221 (301)
202 PRK13644 cbiO cobalt transport 100.0 1.4E-35 2.9E-40 337.6 22.3 200 880-1092 15-219 (274)
203 cd03218 ABC_YhbG The ABC trans 100.0 2.2E-35 4.8E-40 328.5 23.6 205 184-432 13-221 (232)
204 PRK14247 phosphate ABC transpo 100.0 2.8E-35 6E-40 331.4 24.6 216 855-1092 4-229 (250)
205 PRK11300 livG leucine/isoleuci 100.0 1.2E-35 2.6E-40 335.5 21.6 218 854-1093 5-239 (255)
206 PRK14268 phosphate ABC transpo 100.0 2.7E-35 5.9E-40 332.8 24.5 214 854-1092 12-237 (258)
207 PRK10070 glycine betaine trans 100.0 2.4E-35 5.3E-40 348.1 24.9 207 183-432 40-253 (400)
208 PRK14273 phosphate ABC transpo 100.0 2.9E-35 6.2E-40 332.1 24.5 215 854-1092 7-233 (254)
209 PRK14267 phosphate ABC transpo 100.0 2.7E-35 5.8E-40 332.2 24.2 217 854-1092 4-232 (253)
210 PRK11124 artP arginine transpo 100.0 1.6E-35 3.4E-40 331.8 22.1 213 855-1092 3-225 (242)
211 PRK00635 excinuclease ABC subu 100.0 5E-34 1.1E-38 376.6 39.8 135 951-1093 759-902 (1809)
212 PRK13634 cbiO cobalt transport 100.0 2.1E-35 4.5E-40 338.7 23.5 218 184-444 20-249 (290)
213 KOG0055 Multidrug/pheromone ex 100.0 8.1E-36 1.8E-40 374.7 21.6 216 176-433 995-1213(1228)
214 PRK13548 hmuV hemin importer A 100.0 2.2E-35 4.8E-40 333.2 23.1 214 855-1093 3-226 (258)
215 PRK13641 cbiO cobalt transport 100.0 1.5E-35 3.2E-40 339.6 21.9 219 854-1092 2-229 (287)
216 PRK10070 glycine betaine trans 100.0 1.4E-35 3.1E-40 350.0 22.4 203 879-1093 40-250 (400)
217 PRK13652 cbiO cobalt transport 100.0 2.6E-35 5.6E-40 336.1 23.6 215 855-1093 4-223 (277)
218 cd03263 ABC_subfamily_A The AB 100.0 1.9E-35 4.1E-40 326.4 21.6 203 184-431 15-219 (220)
219 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3E-35 6.5E-40 329.4 23.3 206 184-432 14-224 (242)
220 TIGR00960 3a0501s02 Type II (G 100.0 1.7E-35 3.6E-40 325.9 20.8 195 184-422 16-216 (216)
221 TIGR01978 sufC FeS assembly AT 100.0 2.7E-35 5.8E-40 330.3 22.7 207 880-1092 13-229 (243)
222 cd03224 ABC_TM1139_LivF_branch 100.0 3.1E-35 6.7E-40 325.2 22.8 203 184-432 13-220 (222)
223 PRK13638 cbiO cobalt transport 100.0 2.7E-35 5.9E-40 335.1 22.9 201 880-1092 14-220 (271)
224 TIGR03415 ABC_choXWV_ATP choli 100.0 3.8E-35 8.2E-40 344.0 24.5 208 182-432 35-253 (382)
225 PRK10575 iron-hydroxamate tran 100.0 3.1E-35 6.7E-40 333.5 22.9 218 854-1093 11-233 (265)
226 PRK13635 cbiO cobalt transport 100.0 3.1E-35 6.7E-40 335.4 23.0 214 855-1092 6-224 (279)
227 TIGR03415 ABC_choXWV_ATP choli 100.0 2.5E-35 5.4E-40 345.5 22.8 205 877-1093 34-250 (382)
228 cd03269 ABC_putative_ATPase Th 100.0 2.6E-35 5.6E-40 322.9 21.5 198 184-426 13-210 (210)
229 TIGR02315 ABC_phnC phosphonate 100.0 2.3E-35 4.9E-40 330.8 21.5 213 184-431 15-233 (243)
230 PRK14241 phosphate transporter 100.0 5E-35 1.1E-39 330.7 24.5 217 854-1092 4-237 (258)
231 TIGR03411 urea_trans_UrtD urea 100.0 2.7E-35 5.9E-40 329.9 21.9 203 880-1092 15-226 (242)
232 PRK10253 iron-enterobactin tra 100.0 3.2E-35 6.9E-40 333.5 22.7 219 853-1093 6-229 (265)
233 COG4525 TauB ABC-type taurine 100.0 1.3E-35 2.8E-40 300.3 17.2 201 880-1093 18-220 (259)
234 PRK13647 cbiO cobalt transport 100.0 4E-35 8.6E-40 333.8 23.5 204 184-431 18-225 (274)
235 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.6E-35 5.6E-40 324.8 21.2 195 184-422 17-218 (218)
236 PRK00349 uvrA excinuclease ABC 100.0 9.4E-34 2E-38 361.7 38.4 122 955-1092 792-922 (943)
237 cd03298 ABC_ThiQ_thiamine_tran 100.0 2E-35 4.3E-40 324.0 20.0 194 885-1090 16-211 (211)
238 PRK10744 pstB phosphate transp 100.0 5.7E-35 1.2E-39 330.6 24.2 219 850-1092 9-239 (260)
239 PRK11629 lolD lipoprotein tran 100.0 6.4E-35 1.4E-39 324.9 24.0 201 184-428 22-229 (233)
240 PRK09984 phosphonate/organopho 100.0 3.1E-35 6.6E-40 333.3 21.8 221 854-1094 4-239 (262)
241 PRK14242 phosphate transporter 100.0 6.6E-35 1.4E-39 329.0 24.3 221 852-1092 4-232 (253)
242 PRK11231 fecE iron-dicitrate t 100.0 2.6E-35 5.6E-40 332.5 21.0 217 855-1093 3-223 (255)
243 TIGR03410 urea_trans_UrtE urea 100.0 2.8E-35 6E-40 327.3 20.8 200 880-1094 13-218 (230)
244 PRK10584 putative ABC transpor 100.0 7.1E-35 1.5E-39 323.6 24.0 213 854-1088 6-226 (228)
245 PRK11308 dppF dipeptide transp 100.0 6.6E-35 1.4E-39 338.6 24.8 226 854-1093 5-240 (327)
246 TIGR01184 ntrCD nitrate transp 100.0 2.8E-35 6.1E-40 326.8 20.7 198 883-1092 1-199 (230)
247 cd03260 ABC_PstB_phosphate_tra 100.0 3.9E-35 8.5E-40 325.4 21.9 204 184-430 13-226 (227)
248 cd03268 ABC_BcrA_bacitracin_re 100.0 4.2E-35 9.1E-40 320.7 21.7 195 184-426 13-208 (208)
249 PRK13639 cbiO cobalt transport 100.0 5.7E-35 1.2E-39 332.9 23.5 215 855-1093 2-222 (275)
250 TIGR02769 nickel_nikE nickel i 100.0 5.8E-35 1.3E-39 331.3 23.5 223 855-1092 3-235 (265)
251 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 5.6E-34 1.2E-38 365.2 35.4 209 853-1092 450-668 (686)
252 PRK13646 cbiO cobalt transport 100.0 7.8E-35 1.7E-39 333.5 24.6 205 184-432 20-234 (286)
253 PRK11022 dppD dipeptide transp 100.0 8.3E-35 1.8E-39 337.9 25.1 221 855-1093 4-239 (326)
254 cd03267 ABC_NatA_like Similar 100.0 5.6E-35 1.2E-39 325.7 22.4 202 877-1090 31-236 (236)
255 cd03234 ABCG_White The White s 100.0 6.8E-35 1.5E-39 323.2 23.0 204 183-426 19-226 (226)
256 PRK14245 phosphate ABC transpo 100.0 9.3E-35 2E-39 327.1 24.4 219 854-1092 3-229 (250)
257 PRK11831 putative ABC transpor 100.0 9.7E-35 2.1E-39 330.1 24.8 207 184-432 20-232 (269)
258 PRK09536 btuD corrinoid ABC tr 100.0 6.9E-35 1.5E-39 344.4 24.3 209 184-432 16-227 (402)
259 PRK13649 cbiO cobalt transport 100.0 4.8E-35 1E-39 334.8 22.3 217 855-1092 3-229 (280)
260 cd03226 ABC_cobalt_CbiO_domain 100.0 4E-35 8.8E-40 320.1 20.7 192 184-423 13-205 (205)
261 cd03300 ABC_PotA_N PotA is an 100.0 8E-35 1.7E-39 323.8 23.4 201 880-1092 13-215 (232)
262 TIGR03608 L_ocin_972_ABC putat 100.0 3.9E-35 8.4E-40 320.5 20.5 190 879-1080 10-206 (206)
263 PRK13549 xylose transporter AT 100.0 4.8E-35 1E-39 361.8 24.0 221 854-1094 5-229 (506)
264 PRK13632 cbiO cobalt transport 100.0 6.7E-35 1.5E-39 331.7 23.1 215 854-1092 7-226 (271)
265 PRK15079 oligopeptide ABC tran 100.0 8.6E-35 1.9E-39 337.9 24.3 209 183-432 33-250 (331)
266 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.3E-34 2.8E-39 323.1 24.7 206 184-433 14-221 (236)
267 cd03233 ABC_PDR_domain1 The pl 100.0 7.9E-35 1.7E-39 316.6 22.2 196 854-1090 3-202 (202)
268 COG4181 Predicted ABC-type tra 100.0 3E-35 6.5E-40 291.7 17.1 200 876-1088 19-226 (228)
269 TIGR01277 thiQ thiamine ABC tr 100.0 6.2E-35 1.3E-39 320.5 21.6 198 882-1091 13-212 (213)
270 TIGR03873 F420-0_ABC_ATP propo 100.0 4.5E-35 9.7E-40 330.8 20.9 206 879-1093 13-222 (256)
271 PRK13648 cbiO cobalt transport 100.0 9.4E-35 2E-39 330.3 23.7 216 854-1093 7-227 (269)
272 PRK09493 glnQ glutamine ABC tr 100.0 9.1E-35 2E-39 325.2 23.2 205 184-432 14-224 (240)
273 PRK14235 phosphate transporter 100.0 1.2E-34 2.6E-39 328.9 24.4 216 854-1092 19-246 (267)
274 PRK14256 phosphate ABC transpo 100.0 1.7E-34 3.6E-39 325.5 25.4 220 854-1092 4-231 (252)
275 PRK09473 oppD oligopeptide tra 100.0 1.1E-34 2.3E-39 337.3 24.4 225 854-1093 12-247 (330)
276 COG1245 Predicted ATPase, RNas 100.0 4.5E-34 9.8E-39 320.9 28.4 173 883-1081 357-530 (591)
277 COG4175 ProV ABC-type proline/ 100.0 1.6E-35 3.5E-40 320.3 16.2 202 881-1094 42-251 (386)
278 cd03266 ABC_NatA_sodium_export 100.0 6E-35 1.3E-39 321.9 21.2 198 185-426 19-218 (218)
279 PRK13547 hmuV hemin importer A 100.0 7.4E-35 1.6E-39 330.4 22.4 208 879-1093 13-240 (272)
280 COG4175 ProV ABC-type proline/ 100.0 3E-35 6.6E-40 318.2 18.1 222 183-455 40-268 (386)
281 PRK13631 cbiO cobalt transport 100.0 1.1E-34 2.3E-39 335.8 24.1 216 184-444 39-279 (320)
282 cd03232 ABC_PDR_domain2 The pl 100.0 8.1E-35 1.7E-39 314.1 21.5 190 854-1090 3-192 (192)
283 PRK13645 cbiO cobalt transport 100.0 8.1E-35 1.8E-39 334.2 22.7 219 854-1092 6-235 (289)
284 COG4618 ArpD ABC-type protease 100.0 8.4E-35 1.8E-39 332.3 22.4 238 125-435 322-562 (580)
285 cd03297 ABC_ModC_molybdenum_tr 100.0 7.7E-35 1.7E-39 320.0 21.5 197 877-1090 10-214 (214)
286 PRK14259 phosphate ABC transpo 100.0 1.1E-34 2.3E-39 329.6 23.3 215 853-1092 12-248 (269)
287 PRK14237 phosphate transporter 100.0 1.8E-34 3.9E-39 327.5 25.1 224 849-1092 15-246 (267)
288 PRK13633 cobalt transporter AT 100.0 8.9E-35 1.9E-39 332.2 22.7 220 854-1093 4-229 (280)
289 cd03267 ABC_NatA_like Similar 100.0 1.6E-34 3.5E-39 322.0 24.2 202 182-426 32-236 (236)
290 PRK14269 phosphate ABC transpo 100.0 8.7E-35 1.9E-39 326.4 22.1 215 855-1092 3-225 (246)
291 cd03233 ABC_PDR_domain1 The pl 100.0 1.7E-34 3.8E-39 313.9 23.8 183 182-426 18-202 (202)
292 PRK14250 phosphate ABC transpo 100.0 7E-35 1.5E-39 326.1 21.2 209 854-1092 3-216 (241)
293 COG4559 ABC-type hemin transpo 100.0 9E-35 1.9E-39 298.7 20.0 207 184-432 14-229 (259)
294 PRK13640 cbiO cobalt transport 100.0 1.1E-34 2.4E-39 331.5 23.1 217 854-1092 5-227 (282)
295 PRK11264 putative amino-acid A 100.0 1.4E-34 3.1E-39 325.7 23.6 206 184-432 16-232 (250)
296 PRK10771 thiQ thiamine transpo 100.0 7.4E-35 1.6E-39 324.2 21.0 197 885-1093 17-215 (232)
297 TIGR02142 modC_ABC molybdenum 100.0 7.2E-35 1.6E-39 342.8 21.9 194 885-1092 15-216 (354)
298 PRK13635 cbiO cobalt transport 100.0 1.6E-34 3.5E-39 329.5 24.0 216 184-443 20-242 (279)
299 cd03292 ABC_FtsE_transporter F 100.0 7.7E-35 1.7E-39 320.1 20.6 195 184-422 14-214 (214)
300 PRK13651 cobalt transporter AT 100.0 1.2E-34 2.7E-39 333.4 23.1 205 184-432 20-253 (305)
301 PRK15093 antimicrobial peptide 100.0 1.7E-34 3.6E-39 336.5 24.3 222 855-1092 4-243 (330)
302 TIGR00968 3a0106s01 sulfate AB 100.0 1.1E-34 2.3E-39 323.8 21.6 202 880-1093 13-216 (237)
303 KOG0057 Mitochondrial Fe/S clu 100.0 3.1E-35 6.6E-40 339.4 17.5 212 851-1092 348-569 (591)
304 PRK13636 cbiO cobalt transport 100.0 1.2E-34 2.6E-39 331.4 22.4 207 184-433 19-231 (283)
305 PRK11144 modC molybdate transp 100.0 1.3E-34 2.7E-39 340.2 23.0 195 189-432 16-217 (352)
306 KOG0062 ATPase component of AB 100.0 2.1E-34 4.5E-39 329.3 23.9 204 851-1091 359-563 (582)
307 PRK10895 lipopolysaccharide AB 100.0 1.7E-34 3.6E-39 323.3 22.8 206 184-432 16-225 (241)
308 PRK11144 modC molybdate transp 100.0 8.8E-35 1.9E-39 341.5 21.3 191 885-1093 16-214 (352)
309 TIGR02673 FtsE cell division A 100.0 1E-34 2.3E-39 319.1 20.6 194 184-421 15-214 (214)
310 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.3E-33 2.8E-38 363.3 34.0 210 853-1092 476-695 (710)
311 PRK09473 oppD oligopeptide tra 100.0 5.2E-34 1.1E-38 331.5 27.3 214 184-433 29-251 (330)
312 TIGR03410 urea_trans_UrtE urea 100.0 1.8E-34 4E-39 320.7 22.5 202 184-431 13-219 (230)
313 PRK11247 ssuB aliphatic sulfon 100.0 1.8E-34 4E-39 324.5 22.7 194 185-429 26-219 (257)
314 cd03257 ABC_NikE_OppD_transpor 100.0 2.5E-34 5.4E-39 319.3 23.4 201 185-426 19-228 (228)
315 TIGR02770 nickel_nikD nickel i 100.0 1.4E-34 3.1E-39 321.4 21.4 201 882-1092 1-210 (230)
316 TIGR02211 LolD_lipo_ex lipopro 100.0 2E-34 4.4E-39 318.4 22.6 196 184-423 18-220 (221)
317 cd03264 ABC_drug_resistance_li 100.0 1.4E-34 3E-39 317.4 21.0 197 184-426 13-211 (211)
318 cd03299 ABC_ModC_like Archeal 100.0 1.7E-34 3.8E-39 321.7 22.1 199 882-1092 14-214 (235)
319 PRK14239 phosphate transporter 100.0 2.8E-34 6.1E-39 323.7 23.8 215 854-1092 5-231 (252)
320 TIGR01193 bacteriocin_ABC ABC- 100.0 1.1E-32 2.5E-37 354.3 41.8 211 853-1092 472-692 (708)
321 PRK14274 phosphate ABC transpo 100.0 3E-34 6.5E-39 324.6 24.0 215 854-1092 12-238 (259)
322 PRK14270 phosphate ABC transpo 100.0 3E-34 6.5E-39 323.1 23.9 216 854-1093 4-231 (251)
323 PRK11248 tauB taurine transpor 100.0 3E-34 6.6E-39 323.1 23.9 201 184-429 14-216 (255)
324 PRK11022 dppD dipeptide transp 100.0 4.8E-34 1E-38 331.5 26.3 211 184-433 20-243 (326)
325 PRK13632 cbiO cobalt transport 100.0 5E-34 1.1E-38 324.6 25.8 205 184-432 22-230 (271)
326 PRK13642 cbiO cobalt transport 100.0 2.5E-34 5.4E-39 328.0 23.2 216 854-1092 4-224 (277)
327 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.9E-34 6.3E-39 367.7 26.7 205 184-433 466-673 (686)
328 PRK14240 phosphate transporter 100.0 3.5E-34 7.7E-39 322.5 24.1 215 854-1092 3-229 (250)
329 PRK13652 cbiO cobalt transport 100.0 2.2E-34 4.8E-39 328.4 22.7 205 185-432 18-226 (277)
330 PRK14257 phosphate ABC transpo 100.0 3.8E-34 8.1E-39 332.2 24.9 223 853-1093 79-309 (329)
331 PRK14244 phosphate ABC transpo 100.0 2.1E-34 4.5E-39 324.5 22.0 207 880-1092 18-232 (251)
332 COG0444 DppD ABC-type dipeptid 100.0 3E-34 6.4E-39 317.5 22.7 207 879-1093 17-239 (316)
333 TIGR02142 modC_ABC molybdenum 100.0 2.9E-34 6.2E-39 337.7 24.0 199 189-432 15-220 (354)
334 PRK14260 phosphate ABC transpo 100.0 3.5E-34 7.6E-39 323.9 23.8 216 854-1092 7-238 (259)
335 PRK13644 cbiO cobalt transport 100.0 2E-34 4.4E-39 328.0 22.0 204 184-432 15-223 (274)
336 TIGR03005 ectoine_ehuA ectoine 100.0 2.8E-34 6.2E-39 323.6 22.9 207 184-432 13-235 (252)
337 PRK11614 livF leucine/isoleuci 100.0 2.5E-34 5.5E-39 321.0 22.3 203 184-432 18-225 (237)
338 PRK15112 antimicrobial peptide 100.0 1.6E-34 3.4E-39 328.0 20.9 224 854-1092 4-234 (267)
339 TIGR02769 nickel_nikE nickel i 100.0 3.3E-34 7.2E-39 325.1 23.5 208 183-432 23-239 (265)
340 PRK10762 D-ribose transporter 100.0 1.9E-34 4.1E-39 356.1 23.3 218 855-1094 5-227 (501)
341 COG1132 MdlB ABC-type multidru 100.0 2.8E-34 6E-39 360.4 25.1 209 183-433 341-552 (567)
342 PRK14253 phosphate ABC transpo 100.0 4.5E-34 9.8E-39 321.4 24.1 215 854-1092 3-228 (249)
343 PRK14262 phosphate ABC transpo 100.0 4.2E-34 9.1E-39 321.9 23.8 214 855-1092 4-229 (250)
344 TIGR02770 nickel_nikD nickel i 100.0 3.1E-34 6.7E-39 318.7 22.4 204 186-432 1-214 (230)
345 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 2.8E-34 6E-39 317.5 21.9 196 874-1090 29-224 (224)
346 PRK13548 hmuV hemin importer A 100.0 4.3E-34 9.3E-39 322.8 23.8 206 184-432 15-229 (258)
347 PRK11701 phnK phosphonate C-P 100.0 3.1E-34 6.7E-39 324.3 22.5 215 854-1092 6-236 (258)
348 TIGR00972 3a0107s01c2 phosphat 100.0 5E-34 1.1E-38 320.6 24.1 206 185-432 15-231 (247)
349 PRK14273 phosphate ABC transpo 100.0 8.7E-34 1.9E-38 320.0 26.1 206 185-432 21-237 (254)
350 cd03213 ABCG_EPDR ABCG transpo 100.0 3.7E-34 8E-39 309.3 22.1 190 854-1090 3-194 (194)
351 PRK10418 nikD nickel transport 100.0 4.3E-34 9.4E-39 322.2 23.5 214 853-1092 3-225 (254)
352 TIGR00630 uvra excinuclease AB 100.0 6.9E-33 1.5E-37 353.2 37.2 123 954-1092 789-920 (924)
353 TIGR01184 ntrCD nitrate transp 100.0 3.4E-34 7.4E-39 318.1 22.2 202 187-431 1-202 (230)
354 PRK14271 phosphate ABC transpo 100.0 6.2E-34 1.4E-38 324.2 24.9 220 854-1093 21-247 (276)
355 TIGR03411 urea_trans_UrtD urea 100.0 5.2E-34 1.1E-38 319.6 23.9 212 184-432 15-230 (242)
356 PRK13641 cbiO cobalt transport 100.0 3.3E-34 7.2E-39 328.4 22.7 205 184-432 20-233 (287)
357 PRK13648 cbiO cobalt transport 100.0 5.9E-34 1.3E-38 323.8 24.5 204 185-432 23-230 (269)
358 PRK11300 livG leucine/isoleuci 100.0 4.8E-34 1E-38 322.4 23.5 221 184-432 18-242 (255)
359 TIGR03740 galliderm_ABC gallid 100.0 5.4E-34 1.2E-38 315.4 23.4 198 184-430 13-210 (223)
360 PRK11308 dppF dipeptide transp 100.0 7.1E-34 1.5E-38 330.0 25.4 209 183-433 27-244 (327)
361 PRK10908 cell division protein 100.0 3.1E-34 6.7E-39 317.1 21.4 196 184-423 15-216 (222)
362 PRK11176 lipid transporter ATP 100.0 4.2E-34 9.1E-39 360.4 25.4 209 184-433 356-567 (582)
363 PRK14258 phosphate ABC transpo 100.0 5.8E-34 1.3E-38 322.4 24.0 221 854-1092 7-240 (261)
364 PRK13633 cobalt transporter AT 100.0 5.2E-34 1.1E-38 325.8 23.8 206 184-433 23-233 (280)
365 PRK14236 phosphate transporter 100.0 7.5E-34 1.6E-38 323.3 24.9 216 853-1092 24-251 (272)
366 KOG0056 Heavy metal exporter H 100.0 9.4E-35 2E-39 326.3 17.0 251 106-433 500-761 (790)
367 PRK10619 histidine/lysine/argi 100.0 4.6E-34 9.9E-39 322.7 22.9 205 184-432 18-240 (257)
368 PRK11174 cysteine/glutathione 100.0 8.8E-35 1.9E-39 366.8 18.8 210 853-1092 348-567 (588)
369 PRK11176 lipid transporter ATP 100.0 2.1E-32 4.6E-37 345.0 40.3 213 853-1092 340-562 (582)
370 cd03300 ABC_PotA_N PotA is an 100.0 8E-34 1.7E-38 315.8 24.1 206 184-432 13-219 (232)
371 PRK13543 cytochrome c biogenes 100.0 3.7E-34 7.9E-39 314.4 21.0 201 854-1081 11-211 (214)
372 PRK09700 D-allose transporter 100.0 2.3E-34 5.1E-39 356.3 21.6 219 854-1094 5-231 (510)
373 PRK14248 phosphate ABC transpo 100.0 7.3E-34 1.6E-38 323.0 23.8 215 854-1092 21-247 (268)
374 PRK13649 cbiO cobalt transport 100.0 7.3E-34 1.6E-38 325.1 23.9 204 184-432 20-233 (280)
375 PRK13639 cbiO cobalt transport 100.0 7.2E-34 1.6E-38 323.8 23.7 205 184-432 15-225 (275)
376 PRK14250 phosphate ABC transpo 100.0 7.2E-34 1.6E-38 317.9 23.3 200 185-432 17-220 (241)
377 PRK14242 phosphate transporter 100.0 1.4E-33 3.1E-38 318.1 25.8 206 185-432 20-236 (253)
378 PRK14268 phosphate ABC transpo 100.0 7.1E-34 1.5E-38 321.3 23.3 206 184-432 25-241 (258)
379 PRK13538 cytochrome c biogenes 100.0 3.5E-34 7.6E-39 312.3 20.1 187 880-1080 14-202 (204)
380 PRK14275 phosphate ABC transpo 100.0 9.8E-34 2.1E-38 324.2 24.7 215 854-1092 39-265 (286)
381 PRK10790 putative multidrug tr 100.0 6.1E-34 1.3E-38 359.3 25.4 206 185-433 355-563 (592)
382 PRK10584 putative ABC transpor 100.0 7.8E-34 1.7E-38 315.2 23.2 198 184-425 23-227 (228)
383 TIGR02982 heterocyst_DevA ABC 100.0 4.8E-34 1E-38 315.0 21.4 211 855-1086 2-219 (220)
384 PRK14249 phosphate ABC transpo 100.0 8.6E-34 1.9E-38 319.4 23.8 215 854-1092 4-230 (251)
385 PRK11124 artP arginine transpo 100.0 4.3E-34 9.4E-39 320.1 21.3 204 184-431 15-228 (242)
386 cd03299 ABC_ModC_like Archeal 100.0 9.6E-34 2.1E-38 315.7 23.9 204 186-432 14-218 (235)
387 cd03298 ABC_ThiQ_thiamine_tran 100.0 6E-34 1.3E-38 312.3 21.9 195 189-426 16-211 (211)
388 PRK14272 phosphate ABC transpo 100.0 6.8E-34 1.5E-38 320.6 22.9 216 854-1092 4-231 (252)
389 COG4598 HisP ABC-type histidin 100.0 8.6E-35 1.9E-39 290.1 13.7 208 875-1093 14-237 (256)
390 PRK14251 phosphate ABC transpo 100.0 8.9E-34 1.9E-38 319.4 23.8 215 854-1092 4-230 (251)
391 PRK15056 manganese/iron transp 100.0 4.5E-34 9.8E-39 325.1 21.5 219 854-1094 6-227 (272)
392 cd03225 ABC_cobalt_CbiO_domain 100.0 5.2E-34 1.1E-38 312.8 21.1 194 184-421 14-211 (211)
393 PRK14261 phosphate ABC transpo 100.0 9E-34 2E-38 319.7 23.5 215 854-1092 6-232 (253)
394 PRK10575 iron-hydroxamate tran 100.0 8.8E-34 1.9E-38 321.6 23.4 210 184-432 24-236 (265)
395 cd03235 ABC_Metallic_Cations A 100.0 5.4E-34 1.2E-38 313.1 21.0 200 184-426 12-213 (213)
396 PRK13642 cbiO cobalt transport 100.0 2.3E-33 5E-38 320.0 26.8 205 184-432 20-228 (277)
397 COG4525 TauB ABC-type taurine 100.0 6.6E-34 1.4E-38 287.9 19.6 204 184-432 18-223 (259)
398 PRK09984 phosphonate/organopho 100.0 7.8E-34 1.7E-38 321.8 22.7 216 184-431 17-240 (262)
399 PRK14263 phosphate ABC transpo 100.0 7.2E-34 1.6E-38 321.2 22.3 206 879-1092 20-240 (261)
400 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 5.8E-34 1.3E-38 366.6 24.4 206 184-433 492-700 (710)
401 PRK14254 phosphate ABC transpo 100.0 1.2E-33 2.5E-38 323.2 24.2 213 854-1092 39-264 (285)
402 PRK10253 iron-enterobactin tra 100.0 8.4E-34 1.8E-38 321.8 22.9 210 184-432 20-232 (265)
403 PRK14247 phosphate ABC transpo 100.0 1.3E-33 2.9E-38 317.8 24.3 209 184-432 16-233 (250)
404 PRK10419 nikE nickel transport 100.0 1E-33 2.3E-38 321.3 23.6 225 855-1094 4-238 (268)
405 PRK10982 galactose/methyl gala 100.0 4.6E-34 9.9E-39 352.1 22.3 207 879-1094 10-220 (491)
406 PRK15112 antimicrobial peptide 100.0 1.1E-33 2.5E-38 320.9 23.8 207 184-432 26-238 (267)
407 TIGR01166 cbiO cobalt transpor 100.0 3.9E-34 8.4E-39 308.5 18.9 179 879-1067 4-188 (190)
408 PRK13638 cbiO cobalt transport 100.0 1.3E-33 2.8E-38 321.4 24.2 205 184-432 14-224 (271)
409 PRK15439 autoinducer 2 ABC tra 100.0 4.7E-34 1E-38 352.9 22.3 212 854-1094 11-226 (510)
410 PRK10247 putative ABC transpor 100.0 5.8E-34 1.3E-38 315.3 20.8 209 854-1090 7-220 (225)
411 TIGR00958 3a01208 Conjugate Tr 100.0 7.2E-34 1.6E-38 364.0 24.7 206 184-433 494-702 (711)
412 TIGR00968 3a0106s01 sulfate AB 100.0 1.3E-33 2.9E-38 315.0 23.8 206 184-432 13-219 (237)
413 PRK14255 phosphate ABC transpo 100.0 1.6E-33 3.5E-38 317.5 24.6 215 854-1092 5-231 (252)
414 PRK14267 phosphate ABC transpo 100.0 1.2E-33 2.6E-38 318.8 23.6 209 184-432 17-236 (253)
415 cd03231 ABC_CcmA_heme_exporter 100.0 3.3E-34 7.1E-39 311.7 18.3 185 879-1080 12-198 (201)
416 PRK11231 fecE iron-dicitrate t 100.0 8.6E-34 1.9E-38 320.1 22.3 209 184-432 15-226 (255)
417 PRK11288 araG L-arabinose tran 100.0 7.2E-34 1.6E-38 351.0 23.6 216 854-1091 4-223 (501)
418 PRK13640 cbiO cobalt transport 100.0 1.4E-33 3.1E-38 322.4 24.2 209 184-433 20-232 (282)
419 cd03252 ABCC_Hemolysin The ABC 100.0 2.4E-34 5.1E-39 321.3 17.3 196 880-1092 15-220 (237)
420 PRK10771 thiQ thiamine transpo 100.0 1.4E-33 3E-38 313.9 23.4 202 189-433 17-219 (232)
421 PRK15093 antimicrobial peptide 100.0 2.1E-33 4.7E-38 327.2 26.1 214 184-432 20-247 (330)
422 TIGR02633 xylG D-xylose ABC tr 100.0 5.8E-34 1.3E-38 352.2 22.5 209 879-1094 13-227 (500)
423 PRK14265 phosphate ABC transpo 100.0 1.4E-33 3E-38 321.1 23.6 216 853-1093 19-254 (274)
424 PRK03695 vitamin B12-transport 100.0 1.1E-33 2.3E-38 317.6 22.3 198 882-1093 11-218 (248)
425 PRK14238 phosphate transporter 100.0 1.4E-33 3.1E-38 320.7 23.5 215 854-1092 24-250 (271)
426 COG4604 CeuD ABC-type enteroch 100.0 5.6E-35 1.2E-39 296.4 10.6 220 875-1104 9-234 (252)
427 TIGR01846 type_I_sec_HlyB type 100.0 1.3E-32 2.9E-37 352.7 35.2 213 852-1092 453-675 (694)
428 TIGR03375 type_I_sec_LssB type 100.0 3.7E-32 8.1E-37 348.8 39.2 212 853-1092 462-683 (694)
429 PRK13645 cbiO cobalt transport 100.0 1.1E-33 2.3E-38 325.0 22.4 206 184-432 24-239 (289)
430 TIGR03873 F420-0_ABC_ATP propo 100.0 1.5E-33 3.2E-38 318.4 23.2 209 184-432 14-225 (256)
431 COG0444 DppD ABC-type dipeptid 100.0 2.1E-33 4.5E-38 310.8 23.7 212 183-432 17-242 (316)
432 TIGR01978 sufC FeS assembly AT 100.0 2.1E-33 4.5E-38 314.9 24.2 213 184-432 13-233 (243)
433 cd03262 ABC_HisP_GlnQ_permease 100.0 6.7E-34 1.5E-38 312.4 19.8 195 184-422 13-213 (213)
434 TIGR03375 type_I_sec_LssB type 100.0 1.1E-33 2.3E-38 363.0 24.9 208 184-433 478-688 (694)
435 KOG0066 eIF2-interacting prote 100.0 3.8E-33 8.3E-38 309.1 25.4 209 851-1099 583-793 (807)
436 PRK10744 pstB phosphate transp 100.0 3.8E-33 8.2E-38 315.7 26.2 206 185-432 27-243 (260)
437 CHL00131 ycf16 sulfate ABC tra 100.0 2.3E-33 5E-38 316.3 24.2 221 854-1093 7-237 (252)
438 PRK11160 cysteine/glutathione 100.0 1.5E-33 3.2E-38 353.4 25.1 200 185-433 354-562 (574)
439 COG1132 MdlB ABC-type multidru 100.0 2E-34 4.4E-39 361.6 17.1 213 852-1093 326-548 (567)
440 PRK14243 phosphate transporter 100.0 1.9E-33 4.2E-38 318.6 23.0 214 854-1092 10-243 (264)
441 TIGR01193 bacteriocin_ABC ABC- 100.0 1.3E-33 2.7E-38 363.2 24.1 208 184-433 487-697 (708)
442 PRK14235 phosphate transporter 100.0 2.8E-33 6.1E-38 317.8 24.1 208 184-432 32-250 (267)
443 TIGR01277 thiQ thiamine ABC tr 100.0 2.5E-33 5.4E-38 307.8 22.9 199 186-427 13-212 (213)
444 TIGR00958 3a01208 Conjugate Tr 100.0 3.9E-32 8.5E-37 348.0 37.6 211 853-1092 477-697 (711)
445 cd03289 ABCC_CFTR2 The CFTR su 100.0 6.6E-34 1.4E-38 322.0 18.8 212 854-1094 2-222 (275)
446 COG4148 ModC ABC-type molybdat 100.0 2.9E-34 6.3E-39 305.5 14.8 196 189-433 16-218 (352)
447 PRK14257 phosphate ABC transpo 100.0 3.2E-33 6.9E-38 324.5 24.8 211 184-432 95-312 (329)
448 PTZ00265 multidrug resistance 100.0 1.3E-33 2.8E-38 380.5 24.3 214 183-433 1180-1452(1466)
449 PRK14246 phosphate ABC transpo 100.0 2.9E-33 6.3E-38 315.5 23.3 215 855-1092 11-236 (257)
450 PRK14269 phosphate ABC transpo 100.0 3.6E-33 7.8E-38 313.4 23.9 208 184-432 15-229 (246)
451 PRK14274 phosphate ABC transpo 100.0 3.8E-33 8.1E-38 315.7 24.2 207 184-432 25-242 (259)
452 PRK14266 phosphate ABC transpo 100.0 3E-33 6.6E-38 314.9 23.3 218 855-1092 4-229 (250)
453 PRK14241 phosphate transporter 100.0 3.7E-33 8.1E-38 315.5 23.9 208 184-432 17-241 (258)
454 PRK14256 phosphate ABC transpo 100.0 5.2E-33 1.1E-37 313.3 24.9 208 184-432 17-235 (252)
455 PRK14270 phosphate ABC transpo 100.0 4.7E-33 1E-37 313.5 24.4 207 184-432 17-234 (251)
456 cd03297 ABC_ModC_molybdenum_tr 100.0 2.9E-33 6.3E-38 307.5 22.2 192 189-426 16-214 (214)
457 cd03245 ABCC_bacteriocin_expor 100.0 1E-33 2.2E-38 312.6 18.4 195 880-1090 17-220 (220)
458 PRK11701 phnK phosphonate C-P 100.0 5.1E-33 1.1E-37 314.4 24.6 207 184-432 19-240 (258)
459 PRK14259 phosphate ABC transpo 100.0 4.8E-33 1E-37 316.0 24.5 206 184-433 26-253 (269)
460 PRK14237 phosphate transporter 100.0 1.1E-32 2.4E-37 312.9 27.3 207 184-432 33-250 (267)
461 TIGR02323 CP_lyasePhnK phospho 100.0 2E-33 4.4E-38 316.9 21.2 214 855-1092 4-233 (253)
462 COG4987 CydC ABC-type transpor 100.0 8.1E-34 1.8E-38 327.6 18.2 202 183-433 350-561 (573)
463 PRK10418 nikD nickel transport 100.0 5.2E-33 1.1E-37 313.5 24.5 206 185-432 17-229 (254)
464 PRK13546 teichoic acids export 100.0 4.7E-33 1E-37 314.1 24.0 205 878-1104 35-239 (264)
465 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 6.6E-34 1.4E-38 317.9 16.7 196 880-1092 16-221 (238)
466 PRK14248 phosphate ABC transpo 100.0 1.5E-32 3.2E-37 312.2 28.0 207 184-432 34-251 (268)
467 COG1129 MglA ABC-type sugar tr 100.0 1.9E-33 4.1E-38 330.6 21.2 219 875-1102 16-241 (500)
468 PRK14245 phosphate ABC transpo 100.0 4.5E-33 9.8E-38 313.4 23.3 206 184-432 16-233 (250)
469 cd03254 ABCC_Glucan_exporter_l 100.0 7.9E-34 1.7E-38 315.4 16.9 211 854-1092 2-221 (229)
470 PRK10790 putative multidrug tr 100.0 8.7E-34 1.9E-38 357.9 19.5 211 853-1093 339-559 (592)
471 cd03251 ABCC_MsbA MsbA is an e 100.0 5.8E-34 1.3E-38 317.6 15.7 195 881-1092 16-220 (234)
472 COG4604 CeuD ABC-type enteroch 100.0 3.2E-34 6.9E-39 291.0 12.2 212 181-433 11-225 (252)
473 PRK13539 cytochrome c biogenes 100.0 1.1E-33 2.4E-38 309.0 17.5 185 880-1081 15-199 (207)
474 PRK14239 phosphate transporter 100.0 6.1E-33 1.3E-37 312.8 24.1 207 184-432 18-235 (252)
475 PRK13545 tagH teichoic acids e 100.0 3.6E-33 7.9E-38 331.5 23.0 203 880-1104 37-239 (549)
476 cd03230 ABC_DR_subfamily_A Thi 100.0 1.6E-33 3.5E-38 298.9 18.0 157 880-1083 13-171 (173)
477 TIGR02324 CP_lyasePhnL phospho 100.0 4.2E-33 9.2E-38 308.5 21.8 210 855-1081 2-223 (224)
478 TIGR02982 heterocyst_DevA ABC 100.0 1E-32 2.3E-37 304.4 24.7 196 184-422 18-219 (220)
479 PRK11160 cysteine/glutathione 100.0 9.5E-34 2.1E-38 355.0 18.6 212 853-1092 337-557 (574)
480 PRK14252 phosphate ABC transpo 100.0 7.5E-33 1.6E-37 314.2 24.2 216 853-1092 15-244 (265)
481 PRK09580 sufC cysteine desulfu 100.0 4.3E-33 9.3E-38 313.4 21.9 219 855-1092 2-230 (248)
482 PRK14244 phosphate ABC transpo 100.0 6.5E-33 1.4E-37 312.3 23.3 208 184-432 18-236 (251)
483 COG4181 Predicted ABC-type tra 100.0 4.5E-33 9.8E-38 276.3 19.2 202 179-424 18-226 (228)
484 COG4987 CydC ABC-type transpor 100.0 6.8E-34 1.5E-38 328.3 15.3 212 854-1093 336-557 (573)
485 TIGR01189 ccmA heme ABC export 100.0 1.8E-33 3.9E-38 305.3 17.7 184 879-1079 12-197 (198)
486 cd03252 ABCC_Hemolysin The ABC 100.0 5.8E-33 1.3E-37 310.1 22.1 206 184-433 15-225 (237)
487 PRK13547 hmuV hemin importer A 100.0 5.5E-33 1.2E-37 315.1 22.2 213 184-432 14-243 (272)
488 TIGR02203 MsbA_lipidA lipid A 100.0 4.1E-32 9E-37 341.8 32.5 213 853-1092 329-551 (571)
489 COG4152 ABC-type uncharacteriz 100.0 2.4E-33 5.2E-38 293.7 17.5 210 181-435 12-221 (300)
490 PRK10419 nikE nickel transport 100.0 8.2E-33 1.8E-37 314.0 23.5 207 184-432 25-240 (268)
491 PRK14264 phosphate ABC transpo 100.0 5.2E-33 1.1E-37 321.0 22.2 221 854-1092 45-284 (305)
492 PRK14240 phosphate transporter 100.0 1.1E-32 2.5E-37 310.2 24.4 206 185-432 17-233 (250)
493 PRK14262 phosphate ABC transpo 100.0 1.1E-32 2.4E-37 310.3 24.2 207 184-432 16-233 (250)
494 TIGR03771 anch_rpt_ABC anchore 100.0 4.7E-33 1E-37 307.5 20.7 194 888-1093 1-197 (223)
495 PRK14272 phosphate ABC transpo 100.0 1.1E-32 2.5E-37 310.6 24.2 208 184-432 17-235 (252)
496 PRK03695 vitamin B12-transport 100.0 8.9E-33 1.9E-37 310.2 23.1 201 186-432 11-221 (248)
497 TIGR01842 type_I_sec_PrtD type 100.0 1.5E-32 3.3E-37 342.8 27.6 209 184-433 331-542 (544)
498 PRK13540 cytochrome c biogenes 100.0 3.8E-33 8.3E-38 303.2 19.2 182 880-1078 14-197 (200)
499 PRK13657 cyclic beta-1,2-gluca 100.0 8.6E-33 1.9E-37 348.4 25.0 207 185-433 349-558 (588)
500 cd03229 ABC_Class3 This class 100.0 2.3E-33 4.9E-38 299.1 16.7 159 880-1083 13-177 (178)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.8e-227 Score=2082.26 Aligned_cols=1192 Identities=54% Similarity=0.926 Sum_probs=1112.1
Q ss_pred cCchhhhHHHHHhhCCChhhhhhcccccccccCcccceeeccCCcChhhhHHHHHHHHhhhhhcHHHHHHHHHHHhhhcC
Q 000753 51 QDDEEELRWAAIERLPTYDRLKKGMLNQVLEDGKVVKHEVDVSNLAVQDKKRLLESILKIVEEDNEKFLKRIRHRTDRVG 130 (1302)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g 130 (1302)
+||||+|+|||+|||||++| +++.+.. + .++|+.++++++++.++++..+..++|+|+++.++++|++++
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~-~-----~~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~- 81 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIF-E-----SEVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV- 81 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhc-c-----CcccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc-
Confidence 45999999999999999999 6655321 1 169999999999999999999999999999999999999998
Q ss_pred CCCCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceEeeceEEEEeCCeEEEEEcCCCCCH
Q 000753 131 IEIPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGK 210 (1302)
Q Consensus 131 ~~~p~i~v~~~~l~v~~~~~~~~~~~pt~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGK 210 (1302)
++|.++++++++.+++++..| ||+.|...+.++..+...+.. ++...+||+|+||.++||+|++++|||||||
T Consensus 82 -~~p~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ 154 (1391)
T KOG0065|consen 82 -ELPTIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGK 154 (1391)
T ss_pred -cCCceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCch
Confidence 899999999999999998876 999999999999877666654 5567889999999999999999999999999
Q ss_pred HHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHH
Q 000753 211 TTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREK 290 (1302)
Q Consensus 211 STLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~ 290 (1302)
||||++|+|.++..+...|+|+|||++.+++.+++.++|++|+|.|+|+|||||||+|+++|++++.|++ ++.|+|+
T Consensus 155 ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~ 231 (1391)
T KOG0065|consen 155 TTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREK 231 (1391)
T ss_pred HHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHH
Confidence 9999999999998878889999999999999999999999999999999999999999999999999987 5666665
Q ss_pred hcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCC
Q 000753 291 QAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEIS 370 (1302)
Q Consensus 291 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEpt 370 (1302)
.+ ..+|++++++||++|+||+|||++.||+||||||||+||++++++++++||||+|
T Consensus 232 ~~-----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t 288 (1391)
T KOG0065|consen 232 LA-----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEIT 288 (1391)
T ss_pred HH-----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeeccc
Confidence 42 1579999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEEEEcChhHHHHHHHhcCCCCCCCCChHH
Q 000753 371 TGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVAD 450 (1302)
Q Consensus 371 sgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~ad 450 (1302)
+|||++|+.+|++.||+++|..+.|++++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++||
T Consensus 289 ~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~AD 368 (1391)
T KOG0065|consen 289 RGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTAD 368 (1391)
T ss_pred ccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHHhhhcCCCCcccCCCCccccccccccHHHHHHHHHHH
Q 000753 451 FLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAR 530 (1302)
Q Consensus 451 fl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R 530 (1302)
|++++++++++.++|..+..|+.+.+++||.+.|.+++.++++..+++.++++++.++.++..++|..+.|+|++.|+.|
T Consensus 369 fLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R 448 (1391)
T KOG0065|consen 369 FLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIR 448 (1391)
T ss_pred HHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhc
Q 000753 531 EWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRD 610 (1302)
Q Consensus 531 ~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~ 610 (1302)
+|++++||.+++++++++.+++++++|++|+++++ .+..++..+.|++||++++.+|++++|+.+++.++|||+|||+
T Consensus 449 ~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~ 526 (1391)
T KOG0065|consen 449 EFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRD 526 (1391)
T ss_pred HHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhc
Confidence 99999999999999999999999999999999985 5666788899999999999999999999999999999999999
Q ss_pred ccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Q 000753 611 HLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLG 690 (1302)
Q Consensus 611 ~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~ 690 (1302)
..||++|+++++.+++++|++++++++|.+|+||++|+.+++++||.+|+.++++++++.++||+++++++++.+|+++|
T Consensus 527 ~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g 606 (1391)
T KOG0065|consen 527 LSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIG 606 (1391)
T ss_pred ccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHHHHhhCCccccCCCCCCC------------cccchhHHH
Q 000753 691 TFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGRWDAQNKDPSI------------NQPTIGKVL 758 (1302)
Q Consensus 691 ~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~nef~~~~~~~~~~~~~~------------~~~~~G~~~ 758 (1302)
++.++++++++||+|+..+||+||+|++|++|++|+++++++|||++++|+|.+.+|.+ ...+.|..+
T Consensus 607 ~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~ 686 (1391)
T KOG0065|consen 607 GILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDY 686 (1391)
T ss_pred HHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceE
Confidence 99999999999999999999999999999999999999999999999999998443321 235678889
Q ss_pred HhhcCcc-----ccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeeccchhhhccCcccchhhhhhccccc
Q 000753 759 LKIRGFS-----TESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGHEAEGMQMAVRSSSK 833 (1302)
Q Consensus 759 L~~~~~~-----~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (1302)
+..+++. +..+|+|+++|+++||.++|++++++++.|+++.......+..+..+........ . ......
T Consensus 687 v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~-~---~~~~~~-- 760 (1391)
T KOG0065|consen 687 VSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSA-G---SSSEIE-- 760 (1391)
T ss_pred EecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhc-c---cccccc--
Confidence 9988887 7889999999999999999999999999999999888887776655433221100 0 000000
Q ss_pred cccccccccCCccccccCCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhh
Q 000753 834 TVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVL 913 (1302)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L 913 (1302)
........+++++++|+.+..++++||.|.+++|-+++.+| +++++|+|||+.++||.++||||+||||||||||+|
T Consensus 761 ~~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvL 837 (1391)
T KOG0065|consen 761 KLDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVL 837 (1391)
T ss_pred ccccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCchHHHHHHH
Confidence 00011111456788999999999999999999999988877 678999999999999999999999999999999999
Q ss_pred cCCCCCceeEEEEEEcCccCChhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc
Q 000753 914 AGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS 993 (1302)
Q Consensus 914 ~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~ 993 (1302)
+||+++|.++|+|.|||+|++++.++|.+|||+|+|.|.|.+||+|.|.|+|+||++.+++.+++.++|+++++.++|++
T Consensus 838 A~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~ 917 (1391)
T KOG0065|consen 838 AGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKE 917 (1391)
T ss_pred hcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHhhCC-CCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHH
Q 000753 994 LNDSMVGLPGVSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE 1072 (1302)
Q Consensus 994 ~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P-~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~ 1072 (1302)
++|.++|.|| +|||++|||||+||++|++|| .||||||||||||++++..|++.+|+++++|+|||||+||||.++++
T Consensus 918 ~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife 996 (1391)
T KOG0065|consen 918 YADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFE 996 (1391)
T ss_pred hhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHH
Confidence 9999999999 999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred hcCeEEEEecCcEEEEecCCCcchhhHHHHHHhCCCCccccccCCccceEEEeccccccccccccHHHHHhhchHHHHHH
Q 000753 1073 AFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNK 1152 (1302)
Q Consensus 1073 ~~D~i~~l~~gG~~~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 1152 (1302)
.||++++|++||+++|.||+|++++++++||++++|++++++. ||||||||+++.+.+...+.||+++|++|+++++++
T Consensus 997 ~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~~~~~~-NPA~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~~ 1075 (1391)
T KOG0065|consen 997 AFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVKCISDE-NPAEWMLEVIGAGAEASLSVDFAEIWKNSEEYKRNK 1075 (1391)
T ss_pred HHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCccCCCCC-ChHHHHHhhcccccccccCccHHHHHhccHHHHHHH
Confidence 9999999999999999999999999999999999988755555 999999999999988888999999999999999999
Q ss_pred HHHHhhcCCCCC-CCCCCCCCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhH
Q 000753 1153 ELIKELSTPPPG-SSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDL 1231 (1302)
Q Consensus 1153 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~ 1231 (1302)
+++++++.|+++ ..+..++++|++|+|.|++.|+|||+++|||+|+|+++|++++++.||++|++||+.|+ ++||+
T Consensus 1076 e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~l 1152 (1391)
T KOG0065|consen 1076 ELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH---NVQGL 1152 (1391)
T ss_pred HHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC---cHHHH
Confidence 999999999999 88899999999999999999999999999999999999999999999999999999995 79999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCCcChHHHHHHHHHHHHhhHH--HHhhhhcccC
Q 000753 1232 QNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVRNTFHLFK--NLMCFDSIFP 1301 (1302)
Q Consensus 1232 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~--~~~~~~~~~~ 1301 (1302)
+|.+|++|++++|.+.+++..++|.+..||.+|||||++|||||.||++||+++|+|+-+ ..++|.|.|+
T Consensus 1153 qn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~ 1224 (1391)
T KOG0065|consen 1153 QNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYY 1224 (1391)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeee
Confidence 999999999999999999888999999999999999999999999999999999999833 3477777664
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.3e-208 Score=2056.29 Aligned_cols=1277 Identities=62% Similarity=1.051 Sum_probs=1132.5
Q ss_pred ccccccccccccccCcccccccccccccccccccccCCCccccCC--------CccCchhhhHHHHHhhCCChhhhhhcc
Q 000753 4 TVADDLARSFSVRGGQSISSGSRRSWASASIREVWNAPDNVFSRS--------ERQDDEEELRWAAIERLPTYDRLKKGM 75 (1302)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (1302)
..|++|+||+| +++++ +.|.. +|+|++. ..|||||+|+|||+||||||+|+|+++
T Consensus 3 ~~~~~~~~~~~----------~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (1470)
T PLN03140 3 SRGGSMRRSIS----------RSVSR------SSRNM-EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSI 65 (1470)
T ss_pred CCcccHHHHHH----------HHhhh------hhhhh-hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhh
Confidence 35677999999 44433 33433 4666331 127899999999999999999999999
Q ss_pred ccccc-ccCccc---ceeeccCCcChhhhHHHHHHHHhhhhhcHHHHHHHHHHHhhhcCCCCCccEEEEeeeEEEEEEec
Q 000753 76 LNQVL-EDGKVV---KHEVDVSNLAVQDKKRLLESILKIVEEDNEKFLKRIRHRTDRVGIEIPKIEVRYDHLSVEGDVHV 151 (1302)
Q Consensus 76 ~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~p~i~v~~~~l~v~~~~~~ 151 (1302)
+.+.. ++|... ..++|+.+|+.++++.+++++++++++|+++|++++++|+|++|+++|++||+|+||+|++++++
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~ 145 (1470)
T PLN03140 66 MKSFVENDVYGNQLLHKEVDVTKLDGNDRQKFIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYI 145 (1470)
T ss_pred hhcccccccccccccccccccccCChHHHHHHHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecC
Confidence 96421 111111 23599999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCChhHHHHHHHHHHhhhccccCCCcccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceE
Q 000753 152 GTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKI 231 (1302)
Q Consensus 152 ~~~~~pt~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I 231 (1302)
+++.+||++|.+.+.++.+.+..+...+++.+++||+||||.++||++++|+|||||||||||++|+|+++++..++|+|
T Consensus 146 ~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I 225 (1470)
T PLN03140 146 GSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEI 225 (1470)
T ss_pred CcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEE
Confidence 99999999999999998876655543445567889999999999999999999999999999999999998877789999
Q ss_pred EECCcccCCCCccceEEEEccCCCCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhc
Q 000753 232 TYCGHELNEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAG 311 (1302)
Q Consensus 232 ~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~ 311 (1302)
+|||+++++..+++.++||+|+|.|++++||+|||.|+++|++.+.++++..++++++++.++.|+.+++.+|++...++
T Consensus 226 ~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~ 305 (1470)
T PLN03140 226 TYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEG 305 (1470)
T ss_pred EECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhc
Confidence 99999988776778899999999999999999999999999988777777677778888888888889999999988888
Q ss_pred chhhhHHHHHHHHcCCcccccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh
Q 000753 312 QETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHI 391 (1302)
Q Consensus 312 ~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~ 391 (1302)
.+.+..++.+++.+||++|+||.||+++.|||||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++.
T Consensus 306 ~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~ 385 (1470)
T PLN03140 306 VKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHL 385 (1470)
T ss_pred chhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHh
Confidence 87888899999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCceEEEEEecCchhHHhhcCeEEEecCCeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCC
Q 000753 392 LDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQP 471 (1302)
Q Consensus 392 ~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~ 471 (1302)
.++|+|+++|||+++++++||+|++|++|+++|+||++++.+||+++||+||+++++|||+++++++++++++|.....|
T Consensus 386 ~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p 465 (1470)
T PLN03140 386 TEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKP 465 (1470)
T ss_pred cCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999998888888777778
Q ss_pred CCCCChhHHHHHHHhChhcHhHHhhhcCCCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 000753 472 YRYIPVSDFVEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTF 551 (1302)
Q Consensus 472 ~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i 551 (1302)
+++.++++|+++|++++.++++.++++.+.++++.++.....++|..++|+|++.|++|+|++++||+..+++++++.++
T Consensus 466 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii 545 (1470)
T PLN03140 466 YRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIII 545 (1470)
T ss_pred cccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 88889999999999999998888888777766655666666677999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHH
Q 000753 552 MSLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPIS 631 (1302)
Q Consensus 552 ~ali~~tvf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~ 631 (1302)
+|+++|++||+++++..+..+++.+.|++||++++.+|++++++..++.+||||+|||+.+||++|+|+++.++.++|+.
T Consensus 546 ~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~ 625 (1470)
T PLN03140 546 VAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPIS 625 (1470)
T ss_pred HHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHH
Confidence 99999999999987665556678889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCch
Q 000753 632 ILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIE 711 (1302)
Q Consensus 632 ~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip 711 (1302)
++++++|++++|||+|+++++++||.++++++++++++.++|++++++++++.+|+++++++++++++|+||++++++||
T Consensus 626 ~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip 705 (1470)
T PLN03140 626 IIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIP 705 (1470)
T ss_pred HHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHcHHHHHHHHHHHHHhhCCccccCCCCCCCcccchhHHHHhhcCccccCchhhHHHHHHHHHHHHHHHHHHH
Q 000753 712 PFLRWGYYISPMMYGQTSLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIA 791 (1302)
Q Consensus 712 ~~~~W~~~isp~~Y~~~al~~nef~~~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~ 791 (1302)
+||+|++|+||+.|+++++++|||.+.+|.+..+.. ...+.|..+|+.+++..+..|+|+++++|++|+++|++++++
T Consensus 706 ~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~--~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l 783 (1470)
T PLN03140 706 NWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASD--NSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTL 783 (1470)
T ss_pred hHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCC--CCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998886532221 245789999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCcceeeccchhhhcc--Cc----c-cchhh---hhh--cccc-------ccc-c-ccccccCCcccccc
Q 000753 792 ALAYLNPIGDSNSTVIEEDGEKQRAS--GH----E-AEGMQ---MAV--RSSS-------KTV-G-AAQNVTNRGMILPF 850 (1302)
Q Consensus 792 ~l~~~~~~~~~~~~~~~~~~~~~~~~--~~----~-~~~~~---~~~--~~~~-------~~~-~-~~~~~~~~~~~~~~ 850 (1302)
++++.++.......+..+........ .. . .+... ... +... ... . .......+++.+|+
T Consensus 784 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (1470)
T PLN03140 784 ALTYLNPLGKKQAIISEETAEEMEGEEDSIPRSLSSADGNNTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPF 863 (1470)
T ss_pred HHHhcCccCCCCccccccchhhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 99999876554443321111100000 00 0 00000 000 0000 000 0 00112345677899
Q ss_pred CCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcC
Q 000753 851 QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISG 930 (1302)
Q Consensus 851 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g 930 (1302)
.|..++|+|++|.++++.++++.+..++++++|+|||++++||+++||||||||||||||++|+|+.++|.++|+|.+||
T Consensus 864 ~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG 943 (1470)
T PLN03140 864 TPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISG 943 (1470)
T ss_pred CcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECC
Confidence 99999999999999988877777766677789999999999999999999999999999999999987777899999999
Q ss_pred ccCChhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000753 931 YPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1302)
Q Consensus 931 ~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1302)
.+.....+++.+|||+|+|.+++.+||+|+|.|++.++.+.+.+.+++.+.++++++.++|.++.|+.+|.+++++||||
T Consensus 944 ~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgG 1023 (1470)
T PLN03140 944 FPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTE 1023 (1470)
T ss_pred ccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHH
Confidence 98765567788999999999999999999999999888765556666677899999999999999999998888899999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1011 qrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
|||||+||++|+.+|+||||||||||||+.++..+++.|++++++|+|||||+|||+.++++.||++++|++||+++|.|
T Consensus 1024 erkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G 1103 (1470)
T PLN03140 1024 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSG 1103 (1470)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEEC
Confidence 99999999999999999999999999999999999999999998899999999999977889999999999889999999
Q ss_pred CCCcchhhHHHHHHhCCCCccccccCCccceEEEeccccccccccccHHHHHhhchHHHHHHHHHHhhcCCCCCCCCCCC
Q 000753 1091 PLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSSDLYF 1170 (1302)
Q Consensus 1091 ~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 1170 (1302)
+++++++++++||++++|+++||+++|||||+||+++...+...+.||++.|++|++++++++.+++++.++++.++..+
T Consensus 1104 ~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1470)
T PLN03140 1104 PLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYF 1183 (1470)
T ss_pred CcccccccHHHHHHhcCCCCCCCCCCCchhhhhhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCcccccc
Confidence 99998999999999998888899999999999999887665566679999999999999998888888877777777777
Q ss_pred CCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHHHHHHHHHHHHHHhh
Q 000753 1171 PTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNA 1250 (1302)
Q Consensus 1171 ~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 1250 (1302)
+++|++++|+|+++|+||++++|||||.|+++|+++++++|+++|++||++|++..+++|+++++|++|++++|+++.++
T Consensus 1184 ~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~ 1263 (1470)
T PLN03140 1184 ATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNC 1263 (1470)
T ss_pred CccccCCHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999998877889999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHhcCCCcChHHHHHHHHHHHHhh-HHHHhhhhcc
Q 000753 1251 ISVIPVICVERTVYYRERAAGMFAAMPYALAQVRNTFHL-FKNLMCFDSI 1299 (1302)
Q Consensus 1251 ~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~-~~~~~~~~~~ 1299 (1302)
++++|.+..||+||+|||++|||++++|++|++++|+|+ ++..++|.+|
T Consensus 1264 ~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i 1313 (1470)
T PLN03140 1264 STVQPMVAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLI 1313 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998 4444555544
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3.8e-162 Score=1620.03 Aligned_cols=1137 Identities=32% Similarity=0.538 Sum_probs=926.2
Q ss_pred hcHHHHHHHHHHHhhhcCCCCC--ccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceEeece
Q 000753 113 EDNEKFLKRIRHRTDRVGIEIP--KIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDV 190 (1302)
Q Consensus 113 ~~~~~~~~~~~~r~~~~g~~~p--~i~v~~~~l~v~~~~~~~~~~~pt~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 190 (1302)
.|++++++.++++.++.+...| +++|+|+||+|++ ...+...+||+.|.+.+......... ...+++++++||+||
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKL-KKFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHh-cccCCCCcceeeeCC
Confidence 4677788776666666665555 9999999999999 44566678999999888766433222 112344567899999
Q ss_pred EEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC-CCccceEEECCcccCCCC--ccceEEEEccCCCCCCCCCHHHHHH
Q 000753 191 SGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD-LRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMTVRETLD 267 (1302)
Q Consensus 191 s~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~-~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTVrE~l~ 267 (1302)
|+.++|||+++|+||||||||||||+|+|+.++. ...+|+|.+||+++++.. .++.++||+|+|.|++.+||+|||.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 9999999999999999999999999999997432 225999999999875432 3456999999999999999999999
Q ss_pred hhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCChHH
Q 000753 268 FSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQ 347 (1302)
Q Consensus 268 f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGq 347 (1302)
|+++++.+..+.. ...+.++ .+...+.+++.+||++++||.||++..|||||||
T Consensus 161 f~~~~~~~~~~~~---~~~~~~~-----------------------~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPD---GVSREEY-----------------------AKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCC---CCCHHHH-----------------------HHHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 9988764321100 0000000 0123466899999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEEEEcC
Q 000753 348 KKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGP 427 (1302)
Q Consensus 348 kqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv~~G~ 427 (1302)
||||+||++|+.+|+|+||||||+|||+.++.++++.|+++++..|+|+|+++|||+++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999999986689999999999999999999999999999999999
Q ss_pred hhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHHhhhcCCCCcc---
Q 000753 428 RDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRVPYDKS--- 504 (1302)
Q Consensus 428 ~~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~--- 504 (1302)
++++.+||+++||+||++.|+|||+++++++.+. +++.. .+.....++++++++|++++.++++.++++.+.++.
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~-~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPG-YEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hcccc-ccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 9999999999999999999999999999887542 22211 111223578899999999987776666554321110
Q ss_pred ------------cCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q 000753 505 ------------QAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNG 572 (1302)
Q Consensus 505 ------------~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~ 572 (1302)
...+......+|..++|.|++.|++|+++.++||+..++.++++.+++|+++|++||+.+.+. .+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~---~~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNT---SD 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hh
Confidence 000112233467889999999999999999999999999999999999999999999987543 35
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchH
Q 000753 573 GSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAA 652 (1302)
Q Consensus 573 ~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~ 652 (1302)
.+.+.|++||++++.+|.++.++...+.+|++|+|||..++|++++|+++..+.++|+.++.+++|++++|||+|+++++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 67789999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHH
Q 000753 653 SRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLV 732 (1302)
Q Consensus 653 ~~f~~~~l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~ 732 (1302)
++||.++++.+++..++.++++++++++++..+|+.+++++++++++|+||+++.++||+||+|++|+||+.|+++++++
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCccccCC--C-CC---------CCc---------ccchhHHHHhhcCccccCchhhHHHHHHHHHHHHHHHHHHH
Q 000753 733 NEFLGGRWDAQN--K-DP---------SIN---------QPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIA 791 (1302)
Q Consensus 733 nef~~~~~~~~~--~-~~---------~~~---------~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~ 791 (1302)
|||.+..++|.. + ++ ..| +.+.|..+|.. ++.....|+|.+++++++++++|.+++++
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l 688 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYIL 688 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999999988841 1 10 111 23578888875 44555678999999999999999999999
Q ss_pred HHHhcCCCCCCCcceeeccchhhhc--cCcccchhhhhhcccccc--ccccccccC-Cccc-cc--cCCcEEEEecccee
Q 000753 792 ALAYLNPIGDSNSTVIEEDGEKQRA--SGHEAEGMQMAVRSSSKT--VGAAQNVTN-RGMI-LP--FQPLSLTFDNMSYF 863 (1302)
Q Consensus 792 ~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~-~~--~~~~~l~~~~v~~~ 863 (1302)
++++.++.................. .....+.....+...... .......+. ...+ .| .....++|+|++|.
T Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nl~~~ 768 (1394)
T TIGR00956 689 LTEFNKGAKQKGEILVFRRGSLKRAKKAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEKESGEDIFHWRNLTYE 768 (1394)
T ss_pred HHHhccccCCCCceEeeccccccchhhcccccccccccccccccCCCCccccccccccccccccccCCCceEEEEeeEEE
Confidence 9999986544333222211110000 000000000000000000 000000000 0000 01 11235789999887
Q ss_pred eeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc-eeEEEEEEcCccCChhhhccee
Q 000753 864 VDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYPKNQETFARVS 942 (1302)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~g~~~~~~~~~~~~ 942 (1302)
++.+ .+++.+|+|||++++|||++||||||||||||||++|+|+.++| +.+|+|.+||.+... .+++.+
T Consensus 769 ~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i 838 (1394)
T TIGR00956 769 VKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRSI 838 (1394)
T ss_pred ecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcce
Confidence 6421 12467999999999999999999999999999999999987644 346999999998753 467889
Q ss_pred EEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHh
Q 000753 943 GYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELV 1022 (1302)
Q Consensus 943 gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~ 1022 (1302)
|||+|+|.+++.+||+|+|.|++.++.+...+.+++.+.++++++.++|.++.|+.+|.++. +|||||||||+||+||+
T Consensus 839 ~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl~Ia~aL~ 917 (1394)
T TIGR00956 839 GYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRLTIGVELV 917 (1394)
T ss_pred eeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHHHHHHHHH
Confidence 99999999999999999999999888765556666778899999999999999999886543 89999999999999999
Q ss_pred hCCC-CccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCcchhhHHH
Q 000753 1023 ANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIE 1101 (1302)
Q Consensus 1023 ~~P~-illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~~~~~~~~ 1101 (1302)
.+|+ ||||||||||||+.++..|++.|++++++|+|||+|+|||+..+++.||++++|++||+++|.|+++++++++++
T Consensus 918 ~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~~~~~~~ 997 (1394)
T TIGR00956 918 AKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGENSHTIIN 997 (1394)
T ss_pred cCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccccchHHH
Confidence 9997 999999999999999999999999998889999999999986677889999999988899999999988899999
Q ss_pred HHHhCCCCccccccCCccceEEEeccccccccccccHHHHHhhchHHHHHHHHHHhhcCCCCCCC---CCCCCCccCCcH
Q 000753 1102 YFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSS---DLYFPTKYSQPF 1178 (1302)
Q Consensus 1102 ~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 1178 (1302)
||+++ |.++||+++|||||+||+++...+.....+|.+.|+.|+.++...+.++++..+....+ +.....+|+.|+
T Consensus 998 yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 1076 (1394)
T TIGR00956 998 YFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDALSKYAASL 1076 (1394)
T ss_pred HHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCccccccccccccCCCH
Confidence 99986 76679999999999999987655444446899999999888777666555443322111 111224689999
Q ss_pred HHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHHHHHHHHHHHHHHhhhhhhhhHH
Q 000753 1179 LTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVIC 1258 (1302)
Q Consensus 1179 ~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 1258 (1302)
++|+++|++|+++++||||.|+.+|+++++++|+++|++||++++ ++++++|++|++|+++++.++.+ ++++|.|.
T Consensus 1077 ~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~~~~-~~~~~~f~ 1152 (1394)
T TIGR00956 1077 WYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFNPLI-QQYLPPFV 1152 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHHH-HHhhhhHH
Confidence 999999999999999999999999999999999999999999986 57889999999999888887763 46678888
Q ss_pred HHHHHH-HHHhcCCCcChHHHHHHHHHHHHhh-HHHHhhhhcc
Q 000753 1259 VERTVY-YRERAAGMFAAMPYALAQVRNTFHL-FKNLMCFDSI 1299 (1302)
Q Consensus 1259 ~er~v~-~rE~~~~~Y~~~~y~~a~~~~e~p~-~~~~~~~~~~ 1299 (1302)
.||.+| +|||++|+|++.+|++|++++|+|+ ++..++|..|
T Consensus 1153 ~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i 1195 (1394)
T TIGR00956 1153 AQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFI 1195 (1394)
T ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 888885 9999999999999999999999997 4444555443
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.3e-82 Score=782.54 Aligned_cols=587 Identities=28% Similarity=0.496 Sum_probs=493.3
Q ss_pred CCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceEeeceEEEEeCCeEEEEEcCCCCCHHH
Q 000753 133 IPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTT 212 (1302)
Q Consensus 133 ~p~i~v~~~~l~v~~~~~~~~~~~pt~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 212 (1302)
...++++|+|+++++... .+..+++|+||||.++|||++|||||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~-----------------------------~~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK-----------------------------SKKTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC-----------------------------CCccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 356889999999987521 114578999999999999999999999999999
Q ss_pred HHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhc
Q 000753 213 LMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQA 292 (1302)
Q Consensus 213 LL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 292 (1302)
||++|+|+.++...++|+|++||++.+....++.+|||+|+|.++|++||+|||.|+|.++.+.. +++.+
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~~~~~--- 141 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------LSKEE--- 141 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------CCHHH---
Confidence 99999999987667899999999888777778999999999999999999999999999876542 11222
Q ss_pred CCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCC
Q 000753 293 GIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTG 372 (1302)
Q Consensus 293 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsg 372 (1302)
.+.+++.+++.|||.+|+||+||+...|||||||||||+||..|+.+|.||||||||||
T Consensus 142 ---------------------k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 142 ---------------------KRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred ---------------------HHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 23468999999999999999999998899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEEEEcChhHHHHHHHhcCCCCCCCCChHHHH
Q 000753 373 LDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFL 452 (1302)
Q Consensus 373 LDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl 452 (1302)
||+.++.++++.|+++|+. |+|||+++|||+.+++++||++++|++|+++|+|+++++.+||++.|++||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHHhhhcCCCCcccCCCCccccccccccHHHHHHHHHHHHH
Q 000753 453 QEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREW 532 (1302)
Q Consensus 453 ~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~ 532 (1302)
.++.+..+..+..... .......+.++..+...+.......... +. .........++|.|+..+++|.+
T Consensus 280 l~l~s~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~s~~~q~~~L~~R~~ 348 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEEA------VRIAKLINKFSQTDNLKKTLEALEKSLS----TS-KKVEIGTSPSWWTQFKILLKRSL 348 (613)
T ss_pred HHHHccCCCchhHHhH------HHHHHHhhhccccchhhhhHHHHhhhcc----cc-cccccccCCcHHHHHHHHHHHHh
Confidence 9988743110000000 0000001111100000000000000000 00 00001116789999999999999
Q ss_pred HHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcchhHHHHHHHHHHHHHHHHH-HHHHHhhhhhhhhhhhcc
Q 000753 533 LLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFA-ENAMTVLRLPIFYKQRDH 611 (1302)
Q Consensus 533 l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~-~~~~~~~~~~vf~k~r~~ 611 (1302)
..++|++.+...|.+|.+++++++|++||+.+.+.. +.....|.+||.+....|..+. .++....++++|.||+.+
T Consensus 349 ~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~---~~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~~~ 425 (613)
T KOG0061|consen 349 KNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAK---GIQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRETSS 425 (613)
T ss_pred HHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchH---HHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHhc
Confidence 999999999999999999999999999999864332 3346788888888888776665 578888999999999999
Q ss_pred cccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHH
Q 000753 612 LFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGT 691 (1302)
Q Consensus 612 ~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~ 691 (1302)
++|+.++|++++.+.++|+.++.+++|.+++|||+|++++..+|+.+.+..++...++.+++.+++++.++...|.++++
T Consensus 426 ~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~~~ 505 (613)
T KOG0061|consen 426 GLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSLGP 505 (613)
T ss_pred CchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeehHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHHHHhhCCccccCCCCCCCcccchhHHHHhhcCccccCchh
Q 000753 692 FILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWY 771 (1302)
Q Consensus 692 ~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~nef~~~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~ 771 (1302)
++++.+++++||+++.+.||.||.|+.|+|+..|++++++.|||.+....|....+ .++...|..++...++...+ .
T Consensus 506 ~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~--~ 582 (613)
T KOG0061|consen 506 VLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGN-LCCESTGEDVLKQLGFEDSS--F 582 (613)
T ss_pred HHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcC-CcccccHHHHHHhcCCcccc--c
Confidence 99999999999999999999999999999999999999999999873333322211 35677888899888886655 6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000753 772 WIGVGALTGYSFLFNFLFIAALAYLN 797 (1302)
Q Consensus 772 w~~~~~l~~~~~~f~~l~~~~l~~~~ 797 (1302)
|.++.++.++.++|.+++++++++..
T Consensus 583 ~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 583 WLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 88999999999999999999998754
No 5
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=3e-81 Score=786.26 Aligned_cols=572 Identities=26% Similarity=0.463 Sum_probs=483.4
Q ss_pred cccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCC
Q 000753 181 KRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 181 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 260 (1302)
+.++++|+|+|+.++|||+++|+|||||||||||++|+|+.+++...+|+|.+||++++....++.++||+|+|.+++.+
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 44677999999999999999999999999999999999998775456899999999886545567899999999999999
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc-
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM- 339 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~- 339 (1302)
||+|||.|+++++.+... .+. +....++.+++.+||++++||.||++.
T Consensus 115 TV~e~l~f~~~~~~~~~~-------~~~------------------------~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRV-------TKK------------------------EKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCC-------CHH------------------------HHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 999999999887643211 000 012246789999999999999999864
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
.|||||||||||+||++|+.+|+++||||||+|||+.++.++++.|+++++. |+|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~~-g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQK-GKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHhC-CCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 7899999999999999999999999999999999999999999999999874 899999999999999999999999999
Q ss_pred CeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHHhhhcC
Q 000753 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1302)
Q Consensus 420 G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 499 (1302)
|+++|+|+++++.+||+++||+||++.|++||+.++.+....... . .....+++.+.|+.++..++..+....
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999998765322110 0 011234556666665554443333221
Q ss_pred CCCccc---CCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcchh
Q 000753 500 PYDKSQ---AHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRY 576 (1302)
Q Consensus 500 ~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~ 576 (1302)
...... ..........+..+++.|+..+++|.++..+||+..+..++++.+++++++|++||+.+.+. .+.+..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHH
Confidence 111000 00011122346678999999999999999999999999999999999999999999976543 345667
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchHHHH
Q 000753 577 FGALFFSLLNIMFNGFA-ENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRF 655 (1302)
Q Consensus 577 ~g~lff~l~~~~~~~~~-~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f 655 (1302)
.|++|+.++..+|..+. .+.....++++|+|||..++|++++|++++.+.++|+.++.+++|.+++|||+|+++++++|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 89999998888887654 45666789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHHHHh
Q 000753 656 FKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEF 735 (1302)
Q Consensus 656 ~~~~l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~nef 735 (1302)
|.+++++++...++.++++++++++++..+|+.+++++++++++|+||+++.++||+||+|++|+||+.|++++++.|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCcc-ccCCCCCCCcccchhHHHHhhcCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhc
Q 000753 736 LGGRW-DAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYL 796 (1302)
Q Consensus 736 ~~~~~-~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~ 796 (1302)
.+..+ .|...+....|...|..+++.+|+..+ ++|.++++++++.++|.++++++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776 343222111244568999999998764 458999999999999999999999864
No 6
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=9.6e-80 Score=771.12 Aligned_cols=609 Identities=21% Similarity=0.337 Sum_probs=471.6
Q ss_pred CCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceEeeceEEEEeCCeEEEEEcCCCCCHHH
Q 000753 133 IPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTT 212 (1302)
Q Consensus 133 ~p~i~v~~~~l~v~~~~~~~~~~~pt~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 212 (1302)
.++++++|.|+++.+.......+... +...+.......+.. .+..++++|+|||++++|||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~~~~~~~l~-~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSN----IKRILGHKPKISDET-RQIQERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCcccccc----ccccccccccccccc-ccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 35899999999999754310111110 111111000011111 1223567999999999999999999999999999
Q ss_pred HHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhc
Q 000753 213 LMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQA 292 (1302)
Q Consensus 213 LL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 292 (1302)
||++|+|+++++ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.+.. ..+.
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~-------~~~~---- 176 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS-------LTKQ---- 176 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-------CCHH----
Confidence 999999998764 2589999999987542 24569999999999999999999999876542210 0000
Q ss_pred CCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCC
Q 000753 293 GIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTG 372 (1302)
Q Consensus 293 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsg 372 (1302)
+....++.+++.+||++++||.||+...++|||||||||+||++|+.+|+|+||||||+|
T Consensus 177 --------------------~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsg 236 (659)
T PLN03211 177 --------------------EKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSG 236 (659)
T ss_pred --------------------HHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCC
Confidence 011235778999999999999999988999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEEEEcChhHHHHHHHhcCCCCCCCCChHHHH
Q 000753 373 LDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFL 452 (1302)
Q Consensus 373 LDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl 452 (1302)
||+.++.++++.|+++++ .|+|+|+++|||+.+++++||+|++|++|+++|+|+.+++.+||+++||+||++.|||||+
T Consensus 237 LD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ 315 (659)
T PLN03211 237 LDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFL 315 (659)
T ss_pred cCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999999999999999987 4899999999999889999999999999999999999999999999999999999999999
Q ss_pred HhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHHhhhcC---CCCccc------CCCCccccccccccHHHH
Q 000753 453 QEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV---PYDKSQ------AHPASLVKEKYGISKWEL 523 (1302)
Q Consensus 453 ~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~---~~~~~~------~~~~~~~~~~~~~s~~~~ 523 (1302)
.++++...+.........+ ...+.+.+.|++.. .....+.... +....+ ..........+..++|.|
T Consensus 316 ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 391 (659)
T PLN03211 316 LDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQ 391 (659)
T ss_pred HHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHH
Confidence 9998764321100000000 11223334443211 1111111000 000000 000000112244678999
Q ss_pred HHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcchhHHHHHHHHHHHHH-HHHHHHHHHhhhh
Q 000753 524 FRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMF-NGFAENAMTVLRL 602 (1302)
Q Consensus 524 ~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~lff~l~~~~~-~~~~~~~~~~~~~ 602 (1302)
+..+++|.++. +|+..+...|+++.+++|+++|++||+.+ ..+.+.+.|++||++++.++ +.+..+..+..++
T Consensus 392 ~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 392 FSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999888 78888888999999999999999999864 23467789999999877554 5567777888899
Q ss_pred hhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000753 603 PIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRT 682 (1302)
Q Consensus 603 ~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~i~a~~~~ 682 (1302)
++|+|||..++|++++|++++++.++|+.++.+++|++++|||+|+++++++||.+++++++...++.++++++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHHHHhhCCcc-----ccCCCCCCCcccchhHH
Q 000753 683 EVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGRW-----DAQNKDPSINQPTIGKV 757 (1302)
Q Consensus 683 ~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~nef~~~~~-----~~~~~~~~~~~~~~G~~ 757 (1302)
..+|+++++++.+++++|+||+++ +||+||+|++|+||+.|+++++++|||.+.+. +|.... +....+..
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~---~~~~~~c~ 620 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPH---GSDRASCK 620 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcc---cCCCCCCc
Confidence 999999999999999999999997 79999999999999999999999999976542 332211 00001111
Q ss_pred HHhhcCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000753 758 LLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLN 797 (1302)
Q Consensus 758 ~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~ 797 (1302)
++....+. ....|.++++|+++.++|.++.++++++.+
T Consensus 621 ~~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 621 FVEEDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred cchhhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22222222 234788999999999999999999998654
No 7
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.1e-78 Score=807.84 Aligned_cols=600 Identities=22% Similarity=0.402 Sum_probs=499.4
Q ss_pred CCCCCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceEeeceEEEEeCCeEEEEEcCCCCC
Q 000753 130 GIEIPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGAG 209 (1302)
Q Consensus 130 g~~~p~i~v~~~~l~v~~~~~~~~~~~pt~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsG 209 (1302)
.++...+.+.|+|++|+++...+.+ + ...++.++++|+|||+.++||++++|+||||||
T Consensus 860 ~~~~~~~~~~~~~v~y~v~~~~~~~--------------------~-~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaG 918 (1470)
T PLN03140 860 VLPFTPLAMSFDDVNYFVDMPAEMK--------------------E-QGVTEDRLQLLREVTGAFRPGVLTALMGVSGAG 918 (1470)
T ss_pred ccCCCcceEEEEEEEEEEccCcccc--------------------c-cccCcCCceEeeCcEEEEECCeEEEEECCCCCC
Confidence 3455667899999999986431100 0 011223457999999999999999999999999
Q ss_pred HHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHH
Q 000753 210 KTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRRE 289 (1302)
Q Consensus 210 KSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e 289 (1302)
|||||++|+|+.++. ..+|+|.+||++.++...++.+|||+|+|.|++.+||+|||.|++.++.+.. ..+.
T Consensus 919 KTTLL~~LaG~~~~g-~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~-------~~~~- 989 (1470)
T PLN03140 919 KTTLMDVLAGRKTGG-YIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKE-------VSKE- 989 (1470)
T ss_pred HHHHHHHHcCCCCCC-cccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCC-------CCHH-
Confidence 999999999997542 3589999999887644446779999999999999999999999876542110 0000
Q ss_pred HhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCC
Q 000753 290 KQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEI 369 (1302)
Q Consensus 290 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEp 369 (1302)
+....++++++.+||++++|+.||+...+||||||||||+||++|+.+|++||||||
T Consensus 990 -----------------------~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEP 1046 (1470)
T PLN03140 990 -----------------------EKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEP 1046 (1470)
T ss_pred -----------------------HHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCC
Confidence 012246789999999999999999887889999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC-CeEEEEcCh----hHHHHHHHhc-CC-CC
Q 000753 370 STGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE-GQIVYQGPR----DNVLEFFEHM-GF-KC 442 (1302)
Q Consensus 370 tsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~-G~iv~~G~~----~~~~~~f~~l-G~-~~ 442 (1302)
|+|||+.++..+++.|+++++. |+|+|+++|||+.+++++||++++|++ |+++|+|+. +++.+||+++ |+ +|
T Consensus 1047 TsgLD~~~a~~v~~~L~~l~~~-g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~ 1125 (1470)
T PLN03140 1047 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKI 1125 (1470)
T ss_pred CCCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCC
Confidence 9999999999999999999875 899999999999889999999999996 899999996 6899999997 66 49
Q ss_pred CCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHHhhhcCCCCcccCCCCccccccccccHHH
Q 000753 443 PERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWE 522 (1302)
Q Consensus 443 p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~ 522 (1302)
|+..|||||+.++++..... ....++++.|+.++.+++..+.++................+|..++|.
T Consensus 1126 p~~~NPAd~~l~v~~~~~~~------------~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 1193 (1470)
T PLN03140 1126 KEKYNPATWMLEVSSLAAEV------------KLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWG 1193 (1470)
T ss_pred CCCCCchhhhhhhhcccccc------------cccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHH
Confidence 99999999999997643211 112467888888877665544332111000011111123567889999
Q ss_pred HHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcchhHHHHHHHHHHHHHHHHHH-HHHHhhh
Q 000753 523 LFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFAE-NAMTVLR 601 (1302)
Q Consensus 523 ~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~-~~~~~~~ 601 (1302)
|++.|++|+++.+||++.+...|+++.+++|+++|++||+.+.+..+.++.++..|++|+++++..++.... ++....+
T Consensus 1194 Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~e 1273 (1470)
T PLN03140 1194 QFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVE 1273 (1470)
T ss_pred HHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988665556666778999999988877765544 4566679
Q ss_pred hhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000753 602 LPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGR 681 (1302)
Q Consensus 602 ~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~i~a~~~ 681 (1302)
|++|+|||..++|++++|+++..+.++|+.++.+++|.+++|||+|+.++++.||.++++.++...++.+++.+++++++
T Consensus 1274 R~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p 1353 (1470)
T PLN03140 1274 RTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTP 1353 (1470)
T ss_pred HHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHHHHhhCCccccCCCCCCCcccchhHHHHhh
Q 000753 682 TEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKI 761 (1302)
Q Consensus 682 ~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~nef~~~~~~~~~~~~~~~~~~~G~~~L~~ 761 (1302)
+..+|..+++++..++++|+||++++++||+||+|+||+||+.|++++++.|||.+....|.+++. .+..+..+.++..
T Consensus 1354 ~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~ 1432 (1470)
T PLN03140 1354 NQQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGG-APDPTIKWYIQDH 1432 (1470)
T ss_pred cHHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCC-CCCCcHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999887665544321 0112333455777
Q ss_pred cCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000753 762 RGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNP 798 (1302)
Q Consensus 762 ~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~ 798 (1302)
+||.. .|.|.+++++++|+++|.+++++++++++.
T Consensus 1433 ~g~~~--~~~~~~~~il~~~~~~f~~~~~~~~~~~~~ 1467 (1470)
T PLN03140 1433 YGYDP--DFMGPVAAVLVGFTVFFAFIFAFCIRTLNF 1467 (1470)
T ss_pred cCcCc--ccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 88864 467899999999999999999999999875
No 8
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-75 Score=731.65 Aligned_cols=774 Identities=23% Similarity=0.332 Sum_probs=420.9
Q ss_pred CCCcccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCC
Q 000753 178 PSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHD 254 (1302)
Q Consensus 178 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d 254 (1302)
++.+++.+||+|+|+.|++|+.+||+|||||||||++++|.+.++|+ +|+|.++|.++.++.. +.++|.|+|+|
T Consensus 360 YPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QeP 436 (1228)
T KOG0055|consen 360 YPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEP 436 (1228)
T ss_pred CCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeech
Confidence 44556788999999999999999999999999999999999999998 9999999999987764 57899999999
Q ss_pred CCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccccccc
Q 000753 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTM 334 (1302)
Q Consensus 255 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 334 (1302)
.+|. .||+|||.|+. |+.+.++..+++..+.. .+. +..|++..||.
T Consensus 437 vlF~-~tI~eNI~~G~-------------------------~dat~~~i~~a~k~ana-----~~f---i~~lp~g~~T~ 482 (1228)
T KOG0055|consen 437 VLFA-TTIRENIRYGK-------------------------PDATREEIEEAAKAANA-----HDF---ILKLPDGYDTL 482 (1228)
T ss_pred hhhc-ccHHHHHhcCC-------------------------CcccHHHHHHHHHHccH-----HHH---HHhhHHhhccc
Confidence 8886 69999999862 22233334444433221 233 34589999999
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeE
Q 000753 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1302)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~i 414 (1302)
||+. +-.|||||||||+|||||+.+|+|||||||||+||+.+...+.+.|++..+ |+|.|+..|.- .+.+.+|+|
T Consensus 483 vge~-g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~--grTTivVaHRL--StIrnaD~I 557 (1228)
T KOG0055|consen 483 VGER-GVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASK--GRTTIVVAHRL--STIRNADKI 557 (1228)
T ss_pred ccCC-CCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhc--CCeEEEEeeeh--hhhhccCEE
Confidence 9982 222999999999999999999999999999999999999999999998875 67877777754 466779999
Q ss_pred EEecCCeEEEEcChhHHHHHHHhcCCCCCCCCChH-HH--HHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCh---
Q 000753 415 ILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVA-DF--LQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFH--- 488 (1302)
Q Consensus 415 ilL~~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~a-df--l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--- 488 (1302)
++|++|+||+.|+++|+++. .+.. +. +|+....++.+ .+ ... ..++.....+.+.
T Consensus 558 ~v~~~G~IvE~G~h~ELi~~-----------~G~Y~~lv~~Q~~~~~~~~~-~~---~~~----~~~~~~~s~~~s~~~~ 618 (1228)
T KOG0055|consen 558 AVMEEGKIVEQGTHDELIAL-----------GGIYSSLVRLQELEKAAEDE-EE---EES----LKEERSRSLKSSSSSP 618 (1228)
T ss_pred EEEECCEEEEecCHHHHHhc-----------cchHHHHHHHHhhhhhhhcc-cc---ccc----hhhhhhhccccccccc
Confidence 99999999999999999862 0111 11 11211111100 00 000 0000000000000
Q ss_pred -hcHh-HHhhh--cCCCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHH---hh
Q 000753 489 -MGQQ-IASDL--RVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTV---YF 561 (1302)
Q Consensus 489 -~~~~-~~~~l--~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tv---f~ 561 (1302)
.... ..... ..+.++....+ ........++|+.++.+. .+|..+.-....-+.+-....+.+++++.+ |+
T Consensus 619 ~~~~~~~~~~~~~~~~~~e~~~~~--~~~~~~~~s~~~i~k~~~-pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~ 695 (1228)
T KOG0055|consen 619 SLSRGSNRSNLLSVKPEGEDPEEP--VSEEDEKVSFWRIFKLNK-PEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFY 695 (1228)
T ss_pred cccCCccccccccccccccccccc--cccccccccHHHHHHhcc-chhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 0000 00000 00000000000 001112234444443322 232222111111111222223333333332 22
Q ss_pred cccCCCCCCCCcchhHHHHHHHHHHH----------HHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHH
Q 000753 562 RTEMSVGDMNGGSRYFGALFFSLLNI----------MFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPIS 631 (1302)
Q Consensus 562 ~~~~~~~~~~~~~~~~g~lff~l~~~----------~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~ 631 (1302)
..+. +.+......+..+|.++... +|.-+.+....-.|...|.+ +++.++.
T Consensus 696 ~~~~--~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~-----------------ll~qd~~ 756 (1228)
T KOG0055|consen 696 PPDD--DELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRA-----------------LLRQEVG 756 (1228)
T ss_pred CCCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHcCCCc
Confidence 2211 11111122244444333221 22222333333333333322 1222222
Q ss_pred HHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHH---------HHHHHHHHHHHHHhccchHHHHHHHHHHH--HHHHHH
Q 000753 632 ILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSI---------HNMSLPLYRLVAAVGRTEVISNTLGTFIL--LIMMSL 700 (1302)
Q Consensus 632 ~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~---------~~~~~~l~~~i~a~~~~~~ia~~~~~~~~--~~~~l~ 700 (1302)
+|+-. ... ++...++...-.. ..+...+..++.++.-....++-++.+++ .+++.+
T Consensus 757 wFD~~------------~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~ 823 (1228)
T KOG0055|consen 757 WFDDP------------ENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLIL 823 (1228)
T ss_pred ccCCC------------ccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22110 001 1111111111000 00001111111111111112222222211 112222
Q ss_pred hhhcccCCCchhHHHHHHHHc---HHHHHHHHHHHHHhhCCccccCCCCCCCcccchhHHHHhhcCc-----cc--cCch
Q 000753 701 GGFVMAKDDIEPFLRWGYYIS---PMMYGQTSLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGF-----ST--ESNW 770 (1302)
Q Consensus 701 ~Gf~i~~~~ip~~~~W~~~is---p~~Y~~~al~~nef~~~~~~~~~~~~~~~~~~~G~~~L~~~~~-----~~--~~~~ 770 (1302)
+++.-. .++.-.+ --.|.-.+.+.+|-..+-... ...+....+.+.+.- .. ....
T Consensus 824 ~~~~~~--------~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV-------~al~~e~~~~~~y~~~l~~p~~~~~~~~ 888 (1228)
T KOG0055|consen 824 SGYLQK--------KFLKGFSKDDKKAYEEASKIAIEAVSNIRTV-------AALCAEEKFMELYKEELEKPRKSSFKRG 888 (1228)
T ss_pred HHHHHH--------HHHhhhhHHHHHHHHHHHHHHHHHHHhHHHH-------HHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222110 0000000 001111111222211110000 000000011110000 00 0011
Q ss_pred hhHHHHHHHHHHHHH---HHHHHHHHHhcCCCCCCCcceeeccchh-----------hhc--cCcc-cchhhh--hhccc
Q 000753 771 YWIGVGALTGYSFLF---NFLFIAALAYLNPIGDSNSTVIEEDGEK-----------QRA--SGHE-AEGMQM--AVRSS 831 (1302)
Q Consensus 771 ~w~~~~~l~~~~~~f---~~l~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~--~~~~-~~~~~~--~~~~~ 831 (1302)
.|.+++.-+...++| .+.++.+...... +... ..+.... ... ...+ ...... .+-..
T Consensus 889 ~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~-g~~~---~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i 964 (1228)
T KOG0055|consen 889 LISGLGFGFSQSLLFFVYALSFWYGARLISN-GEMT---FEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEI 964 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc-CCcC---HHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Confidence 233332222222211 1122222222111 0000 0000000 000 0000 000000 00000
Q ss_pred cccccccccccCCccccccCCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHh
Q 000753 832 SKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMD 911 (1302)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~ 911 (1302)
-...+........+...+.....++|+||++.||..+ +.+||+|+|++|++|+-+||||||||||||.+.
T Consensus 965 ~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~ 1034 (1228)
T KOG0055|consen 965 LDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVIS 1034 (1228)
T ss_pred hcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCCHHHHHH
Confidence 0000101111122333455566899999999998654 467999999999999999999999999999999
Q ss_pred hhcCCCCCceeEEEEEEcCccCCh---hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHH
Q 000753 912 VLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMEL 988 (1302)
Q Consensus 912 ~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~ 988 (1302)
+|-+..+ +..|.|.|||.++.. ..+|+++|.|.|+|.+|. -|++||+.|+. .+.+.++ +.++++.
T Consensus 1035 LLeRfYd--p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~-----~~vs~~e----Ii~Aak~ 1102 (1228)
T KOG0055|consen 1035 LLERFYD--PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS-----EEVSEEE----IIEAAKL 1102 (1228)
T ss_pred HHHHhcC--CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC-----CCCCHHH----HHHHHHH
Confidence 9997654 568999999998644 567889999999999985 69999999981 1133322 3344443
Q ss_pred c-------CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEE
Q 000753 989 V-------ELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVC 1061 (1302)
Q Consensus 989 l-------~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~ 1061 (1302)
. +|.+-.|+.+|..|. +||||||||++|||||++||+||+|||+||+||.++.+.|+++|++.. .|+|.|+
T Consensus 1103 ANaH~FI~sLP~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~Iv 1180 (1228)
T KOG0055|consen 1103 ANAHNFISSLPQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIV 1180 (1228)
T ss_pred hhhHHHHhcCcCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEE
Confidence 3 344446788886554 799999999999999999999999999999999999999999999975 6999999
Q ss_pred EecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1062 TIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1062 t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
++|++| ..+.+|.|.++++ |+|++.|+..
T Consensus 1181 IAHRLS--TIqnaD~I~Vi~~-G~VvE~GtH~ 1209 (1228)
T KOG0055|consen 1181 IAHRLS--TIQNADVIAVLKN-GKVVEQGTHD 1209 (1228)
T ss_pred Eecchh--hhhcCCEEEEEEC-CEEEecccHH
Confidence 999986 6788999999985 8999999853
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.7e-76 Score=730.19 Aligned_cols=565 Identities=26% Similarity=0.405 Sum_probs=473.7
Q ss_pred ccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCCC
Q 000753 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 261 (1302)
.++++|+||||.++||.+|||||+|||||||||++||||... ..++|+|.+||++.++...+|.+|||.|+|.|.+++|
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~-G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~T 880 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTG-GYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELT 880 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCccc-ceEEeEEEECCeeCchhhhccccceeecccccCcccc
Confidence 567899999999999999999999999999999999999765 3589999999999997778899999999999999999
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
|||.|.|+|.++.+.+ ....| ....+|++++.|+|++++|.+||+.. .
T Consensus 881 VrESL~fSA~LRlp~~-------v~~~e------------------------k~~yVe~Vi~lleL~~~~daiVG~~G-~ 928 (1391)
T KOG0065|consen 881 VRESLRFSAALRLPKE-------VSDEE------------------------KYEYVEEVIELLELKEYADALVGLPG-S 928 (1391)
T ss_pred hHHHHHHHHHHcCCCc-------CCHHH------------------------HHHHHHHHHHHhCchhhhhhhccCCC-C
Confidence 9999999998865432 11111 12468999999999999999999876 9
Q ss_pred CCChHHHHHHHHHHHHhcCC-CEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEec-C
Q 000753 342 GISGGQKKRVTTGEMLVGTA-NVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS-E 419 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p-~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~-~ 419 (1302)
|||.+||||++||.+|+.+| .||||||||||||+.++..|++.+|++++ .|+||+|++|||+.++++.||++++|. +
T Consensus 929 GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~-tGqtIlCTIHQPS~~ife~FD~LLLLkrG 1007 (1391)
T KOG0065|consen 929 GLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLAD-TGQTILCTIHQPSIDIFEAFDELLLLKRG 1007 (1391)
T ss_pred CCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHh-cCCeEEEEecCCcHHHHHHHhHHHHHhcC
Confidence 99999999999999999999 99999999999999999999999999998 699999999999999999999999996 5
Q ss_pred CeEEEEcChhH----HHHHHHhcC-CCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHH
Q 000753 420 GQIVYQGPRDN----VLEFFEHMG-FKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIA 494 (1302)
Q Consensus 420 G~iv~~G~~~~----~~~~f~~lG-~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 494 (1302)
|++||.||..+ +++||++.| .+||...|||||+.|+++...+.. ...++++.|++|..+++..
T Consensus 1008 GqtVY~G~lG~~s~~li~YFes~~~~~~~~~~NPA~~mLevi~~~~~~~------------~~~D~a~~w~~S~e~k~~~ 1075 (1391)
T KOG0065|consen 1008 GQTVYFGPLGENSSKLIEYFESIGGVKCISDENPAEWMLEVIGAGAEAS------------LSVDFAEIWKNSEEYKRNK 1075 (1391)
T ss_pred CeEEEecCcccccHHHHHHHHhcCCccCCCCCChHHHHHhhcccccccc------------cCccHHHHHhccHHHHHHH
Confidence 89999999744 677999987 899999999999999987643321 1237899999999888877
Q ss_pred hhhcCCCCcccC-CCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCc
Q 000753 495 SDLRVPYDKSQA-HPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGG 573 (1302)
Q Consensus 495 ~~l~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~ 573 (1302)
++++.-.+..+. ........+|..+.|.|++.|++|+++..||++.+...|++..++.++++|..||+.+. +.++.
T Consensus 1076 e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~l 1152 (1391)
T KOG0065|consen 1076 ELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH---NVQGL 1152 (1391)
T ss_pred HHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC---cHHHH
Confidence 665432211111 22334456688999999999999999999999999999999999999999999999883 45667
Q ss_pred chhHHHHHHHHHHHHHHHHH-HHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchH
Q 000753 574 SRYFGALFFSLLNIMFNGFA-ENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAA 652 (1302)
Q Consensus 574 ~~~~g~lff~l~~~~~~~~~-~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~ 652 (1302)
++.++++|.++++...+... .......++-+++|||..+.|+..+|+++..++++|+.++.+++|.+++|+++||...+
T Consensus 1153 qn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a 1232 (1391)
T KOG0065|consen 1153 QNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTA 1232 (1391)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhH
Confidence 78888888877765443322 34455568889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHH
Q 000753 653 SRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLV 732 (1302)
Q Consensus 653 ~~f~~~~l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~ 732 (1302)
.+++.+++..+........++.++.+++|+...|..+.+++..++.+|+||++|+..||.||+|+||+||+.|..++++.
T Consensus 1233 ~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gli~ 1312 (1391)
T KOG0065|consen 1233 SKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGLIS 1312 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHHHH
Confidence 99999999999889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCccccCCCCCC----CcccchhHHHHhhcC----ccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000753 733 NEFLGGRWDAQNKDPS----INQPTIGKVLLKIRG----FSTESNWYWIGVGALTGYSFLFNFLFIAALAYLN 797 (1302)
Q Consensus 733 nef~~~~~~~~~~~~~----~~~~~~G~~~L~~~~----~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~ 797 (1302)
..+++..-.|...+-. .+..+.|+.+...++ +..+..-+ ...+..+|.+.+.+++.+.++|.+
T Consensus 1313 ~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~--~~c~~c~y~v~~~~l~~f~~~y~~ 1383 (1391)
T KOG0065|consen 1313 SQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLAT--TACVYCAYTVADAFLAAFNIKYLN 1383 (1391)
T ss_pred HHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcce--eEEEEeeeehHHHHHHHHHHHHHH
Confidence 9998766555432211 134567777776666 33222110 111223345555566666655543
No 10
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.9e-72 Score=754.78 Aligned_cols=562 Identities=25% Similarity=0.367 Sum_probs=463.2
Q ss_pred cceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCCCH
Q 000753 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTV 262 (1302)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 262 (1302)
++++|+|||+.++||++++|+|||||||||||++|+|+.++....+|+|.+||++++. ..++.++||+|+|.+++.+||
T Consensus 775 ~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv 853 (1394)
T TIGR00956 775 KRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTV 853 (1394)
T ss_pred CcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcceeeecccccCCCCCCH
Confidence 3579999999999999999999999999999999999987432347999999998753 346789999999999999999
Q ss_pred HHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCC
Q 000753 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1302)
Q Consensus 263 rE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1302)
+|||.|+++++.+.. .++. +....++.+++.+||++++|+.||+. .++
T Consensus 854 ~E~L~~~a~l~~~~~-------~~~~------------------------~~~~~v~~~l~~l~L~~~~d~~v~~~-~~~ 901 (1394)
T TIGR00956 854 RESLRFSAYLRQPKS-------VSKS------------------------EKMEYVEEVIKLLEMESYADAVVGVP-GEG 901 (1394)
T ss_pred HHHHHHHHHhCCCCC-------CCHH------------------------HHHHHHHHHHHHcCChhhCCCeeCCC-CCC
Confidence 999999876543211 0000 01224678999999999999999964 348
Q ss_pred CChHHHHHHHHHHHHhcCCC-EEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC-
Q 000753 343 ISGGQKKRVTTGEMLVGTAN-VLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG- 420 (1302)
Q Consensus 343 LSGGqkqRvsia~al~~~p~-vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G- 420 (1302)
|||||||||+||++|+.+|+ ||||||||||||+.++..+++.|+++++ .|+|+|+++|||+..+++.||+|++|++|
T Consensus 902 LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~-~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG 980 (1394)
T TIGR00956 902 LNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLAD-HGQAILCTIHQPSAILFEEFDRLLLLQKGG 980 (1394)
T ss_pred CCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHhcCEEEEEcCCC
Confidence 99999999999999999997 9999999999999999999999999986 48999999999998888999999999987
Q ss_pred eEEEEcCh----hHHHHHHHhcCC-CCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHHh
Q 000753 421 QIVYQGPR----DNVLEFFEHMGF-KCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIAS 495 (1302)
Q Consensus 421 ~iv~~G~~----~~~~~~f~~lG~-~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 495 (1302)
+++|+|+. +++.+||+++|+ +||+..|||||+.|+.+...... ...++.+.|+.+...++..+
T Consensus 981 ~iv~~G~~~~~~~~~~~yf~~~G~~~~p~~~NpAd~~ldvi~~~~~~~------------~~~~~~~~~~~s~~~~~~~~ 1048 (1394)
T TIGR00956 981 QTVYFGDLGENSHTIINYFEKHGAPKCPEDANPAEWMLEVIGAAPGAH------------ANQDYHEVWRNSSEYQAVKN 1048 (1394)
T ss_pred EEEEECCcccccchHHHHHHhcCCCCCCCCCCHHHHHHHHhhcccccc------------hhccHHHHHhcCHHHHHHHH
Confidence 99999997 678999999996 99999999999999876432110 01245566666655444333
Q ss_pred hhc---CCCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q 000753 496 DLR---VPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNG 572 (1302)
Q Consensus 496 ~l~---~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~ 572 (1302)
++. .+..............++..++|.|++.+++|.++..+|++.+...|+++.+++|+++|++||+.+.+ ..+
T Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~---~~~ 1125 (1394)
T TIGR00956 1049 ELDRLEAELSKAEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTS---LQG 1125 (1394)
T ss_pred HHHHhhcccccCccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC---HHH
Confidence 221 11111100001112246788999999999999999999999999999999999999999999998753 345
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcch
Q 000753 573 GSRYFGALFFSLLNIMFNGFAENAMTVLRLPI-FYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPA 651 (1302)
Q Consensus 573 ~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~v-f~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~ 651 (1302)
.++..|++|+.++...+.....++..+.++++ |+|||..++|++++|++++.+.++|+.++.+++|.+++||++|+.++
T Consensus 1126 i~~~~g~~f~~~~~~~~~~~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~ 1205 (1394)
T TIGR00956 1126 LQNQMFAVFMATVLFNPLIQQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWN 1205 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCc
Confidence 67788988887776555444445555666766 49999999999999999999999999999999999999999999987
Q ss_pred HHH-------HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHH
Q 000753 652 ASR-------FFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMM 724 (1302)
Q Consensus 652 ~~~-------f~~~~l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~ 724 (1302)
+.. |+.+++..++...++.+++.++++++++..+|..+++++..++++|+||+++.++||.||+|++|+||+.
T Consensus 1206 ~~~~~~~~~~f~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~ 1285 (1394)
T TIGR00956 1206 ASKTGQVHERGVLFWLLSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFT 1285 (1394)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHH
Confidence 765 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCccccCCC--------CC---------------------------CCcccchhHHHHhhcCccccCc
Q 000753 725 YGQTSLLVNEFLGGRWDAQNK--------DP---------------------------SINQPTIGKVLLKIRGFSTESN 769 (1302)
Q Consensus 725 Y~~~al~~nef~~~~~~~~~~--------~~---------------------------~~~~~~~G~~~L~~~~~~~~~~ 769 (1302)
|++++++.|||.+....|... .+ .+|....|..+|..+++...+
T Consensus 1286 y~~~~l~~~~~~~~~~~C~~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~~- 1364 (1394)
T TIGR00956 1286 YLVQALLSTGLADVPVTCKVKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYSG- 1364 (1394)
T ss_pred HHHHHHHHHHcCCCeeecCccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCcccc-
Confidence 999999999999887655321 00 122356888999988886655
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhc
Q 000753 770 WYWIGVGALTGYSFLFNFLFIAALAYL 796 (1302)
Q Consensus 770 ~~w~~~~~l~~~~~~f~~l~~~~l~~~ 796 (1302)
.|.+++++++|.+++ ++.++++.|.
T Consensus 1365 -~w~~~~i~~~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1365 -RWRNFGIFIAFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred -cccchhhhhHHHHHH-HHHHHhhheE
Confidence 588999999998887 6666666664
No 11
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.5e-70 Score=727.49 Aligned_cols=217 Identities=25% Similarity=0.398 Sum_probs=186.6
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++. +++.+|+|||+.|++||++||+||||||||||+++|+|... +.+|+|.++|++.
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEEC
Confidence 4778888765421 12569999999999999999999999999999999999765 3479999999886
Q ss_pred Ch--hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000753 934 NQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1302)
Q Consensus 934 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1302)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.++.++++++.++|.+..|+.+ +.|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHH
Confidence 42 2345679999999999999999999998776653 233444567889999999998888875 4799999
Q ss_pred HHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000753 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1302)
Q Consensus 1012 rqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~ 1091 (1302)
||||+||+||+.+|+||||||||+|||+.+++.+++.|++++++|+|||+|||+++ ++...||++++|.+ |++++.|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999986 67778999999985 89999998
Q ss_pred CC
Q 000753 1092 LG 1093 (1302)
Q Consensus 1092 ~~ 1093 (1302)
+.
T Consensus 2154 ~q 2155 (2272)
T TIGR01257 2154 IQ 2155 (2272)
T ss_pred HH
Confidence 64
No 12
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.9e-72 Score=715.85 Aligned_cols=758 Identities=22% Similarity=0.288 Sum_probs=427.5
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCCCHHH
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRE 264 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVrE 264 (1302)
+.|+|||+.|++|+++||+||.||||||||.+|.|+++.. +|+|.++| .++||+|++|+++ .||||
T Consensus 535 ~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~pWI~n-gTvre 600 (1381)
T KOG0054|consen 535 PTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQPWIQN-GTVRE 600 (1381)
T ss_pred ccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEeccccHhhC-CcHHH
Confidence 3799999999999999999999999999999999999875 99999998 4999999999996 59999
Q ss_pred HHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCC
Q 000753 265 TLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGIS 344 (1302)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLS 344 (1302)
||.|+... ...+|+...+.|..+++..+ |+.+..|.||+ .+-.||
T Consensus 601 NILFG~~~--d~~rY~~Vi~aC~L~~Dle~--------------------------------Lp~GD~TeIGE-rGinLS 645 (1381)
T KOG0054|consen 601 NILFGSPY--DEERYDKVIKACALKKDLEI--------------------------------LPFGDLTEIGE-RGINLS 645 (1381)
T ss_pred hhhcCccc--cHHHHHHHHHHccCHhHHhh--------------------------------cCCCCcceecC-CccCCc
Confidence 99998654 34567766666666554443 44555799997 334489
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000753 345 GGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICK-FLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIV 423 (1302)
Q Consensus 345 GGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~-~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv 423 (1302)
||||||+++|||++.++||++||+|.|++|+++..+|.+ +++.+- .++|+|.++|| .+....+|.|++|++|+|+
T Consensus 646 GGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L--~~KT~ILVTHq--l~~L~~ad~Iivl~~G~I~ 721 (1381)
T KOG0054|consen 646 GGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLL--RGKTVILVTHQ--LQFLPHADQIIVLKDGKIV 721 (1381)
T ss_pred HhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhh--cCCEEEEEeCc--hhhhhhCCEEEEecCCeEe
Confidence 999999999999999999999999999999999999884 554433 36899999885 4788999999999999999
Q ss_pred EEcChhHHHH---HHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHHhhhcC-
Q 000753 424 YQGPRDNVLE---FFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV- 499 (1302)
Q Consensus 424 ~~G~~~~~~~---~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~- 499 (1302)
..|+++|+.+ .|+.+ ...++. +++.. .....+.......+ .+. +.. .......+.
T Consensus 722 ~~Gty~el~~~~~~~~~l-~~~~~~--------------~~~~~-~~~~~~~~~~~~~~-~~~-~~~---~~~~~~~~~~ 780 (1381)
T KOG0054|consen 722 ESGTYEELLKSGGDFAEL-AHEEES--------------EQEEE-ASEKDLESGESSRE-SES-RSL---ESLSSEEEKS 780 (1381)
T ss_pred cccCHHHHHhcchhHHHH-hhccch--------------hhccc-cccccccccccccc-hhh-hhh---hhhccccccc
Confidence 9999999984 33332 000000 00000 00000000000000 000 000 000000000
Q ss_pred CCCcc-cCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HHHHHHhhcccCCCC---CC--CC
Q 000753 500 PYDKS-QAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMS-LICMTVYFRTEMSVG---DM--NG 572 (1302)
Q Consensus 500 ~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~a-li~~tvf~~~~~~~~---~~--~~ 572 (1302)
...+. +.+....+.++.|...|..|+.|++..+... ...++-+++..... .+....|+..+.+.. .. .+
T Consensus 781 ~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~----~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~ 856 (1381)
T KOG0054|consen 781 KDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFL----LVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVS 856 (1381)
T ss_pred ccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHH----HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCC
Confidence 00000 0001111223567888999988886521110 01111111111111 122222222111111 10 11
Q ss_pred cchhHHHH-HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcch
Q 000753 573 GSRYFGAL-FFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPA 651 (1302)
Q Consensus 573 ~~~~~g~l-ff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~ 651 (1302)
...|.+.. ++++...++..+..+.+.......-.+-++ .+-..+++.|++||+++ .
T Consensus 857 ~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~---------~ml~~Ilrapm~FFdtT--------------P 913 (1381)
T KOG0054|consen 857 TSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHD---------KLLNSILRAPMSFFDTT--------------P 913 (1381)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHhCcchhcCCC--------------C
Confidence 22222211 111111111111111111111111111111 12244677788888776 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc------cchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHH
Q 000753 652 ASRFFKQFLAFFSIHNMSLPLYRLVAAVG------RTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMY 725 (1302)
Q Consensus 652 ~~~f~~~~l~~~~~~~~~~~l~~~i~a~~------~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y 725 (1302)
.||.+++|..+....+...+........+ --.+++.....+++.++. +.++||.-..+|
T Consensus 914 ~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~p---------------l~v~~~~~~~~Y 978 (1381)
T KOG0054|consen 914 TGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIP---------------LGVIYYFVQRYY 978 (1381)
T ss_pred ccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHH---------------HHHHHHHHHHHH
Confidence 67888888777666655444322211110 001111111111111111 112223222333
Q ss_pred HHHHHHHHHhhCCccccCCCCCCCcccc---hhHHHHhhcCcc------------------------ccCchhhHHHHHH
Q 000753 726 GQTSLLVNEFLGGRWDAQNKDPSINQPT---IGKVLLKIRGFS------------------------TESNWYWIGVGAL 778 (1302)
Q Consensus 726 ~~~al~~nef~~~~~~~~~~~~~~~~~~---~G~~~L~~~~~~------------------------~~~~~~w~~~~~l 778 (1302)
--.+.-+....+ ....|.+++.. .| +-.+|.|. ..+.|+-+.+-.+
T Consensus 979 ~~tsReLkRLes-----itRSPi~sh~~Etl~G--lsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~i 1051 (1381)
T KOG0054|consen 979 LATSRELKRLES-----ITRSPIYSHFSETLQG--LSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELL 1051 (1381)
T ss_pred HHHhHHHHHhhh-----cccchHHHhHHHHhcC--cceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 222222111111 11111111000 00 00011111 1112222222222
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCc-----ceeeccchhhhc--cCcccchhhhhhcccc---ccccccccccCCcccc
Q 000753 779 TGYSFLFNFLFIAALAYLNPIGDSNS-----TVIEEDGEKQRA--SGHEAEGMQMAVRSSS---KTVGAAQNVTNRGMIL 848 (1302)
Q Consensus 779 ~~~~~~f~~l~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 848 (1302)
-..++++..++ +.+..-.....+.. +...-++.-... ...+.+..+.+++... ...+++......+...
T Consensus 1052 g~~~v~~~al~-~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp 1130 (1381)
T KOG0054|consen 1052 GNLVVLIAALF-AVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPP 1130 (1381)
T ss_pred HHHHHHHHHHH-HHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCC
Confidence 22222221111 11111110100100 000000000000 0000010001111000 0000000000001011
Q ss_pred ccC--CcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEE
Q 000753 849 PFQ--PLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDI 926 (1302)
Q Consensus 849 ~~~--~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i 926 (1302)
+.+ ...++|+|++..|.. +-..+|||||++|+|||++||+|++|||||||+++|.+... +.+|+|
T Consensus 1131 ~~WP~~G~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e--~~~G~I 1197 (1381)
T KOG0054|consen 1131 PSWPSKGEIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVE--PAEGEI 1197 (1381)
T ss_pred CCCCCCCeEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcC--ccCCeE
Confidence 112 246899997654431 22469999999999999999999999999999999999765 357999
Q ss_pred EEcCccCCh---hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccccccccc---
Q 000753 927 KISGYPKNQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVG--- 1000 (1302)
Q Consensus 927 ~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g--- 1000 (1302)
.|||.++.+ .++|++++.+||||.+|. +.+|.|.|+..+..++.+|++||.++|.+......+
T Consensus 1198 ~IDgvdI~~igL~dLRsrlsIIPQdPvLFs-----------GTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld 1266 (1381)
T KOG0054|consen 1198 LIDGVDISKIGLHDLRSRLSIIPQDPVLFS-----------GTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLD 1266 (1381)
T ss_pred EEcCeecccccHHHHHhcCeeeCCCCceec-----------CccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCC
Confidence 999999765 567889999999998754 444555577777888889999999999775433221
Q ss_pred ---CCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeE
Q 000753 1001 ---LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL 1077 (1302)
Q Consensus 1001 ---~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i 1077 (1302)
.++..++|.||||.+|+||||+++++||+|||+|+++|+++...|+++||+.. +++|||++.|+.+ ....+|+|
T Consensus 1267 ~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F-~dcTVltIAHRl~--TVmd~DrV 1343 (1381)
T KOG0054|consen 1267 SEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEF-KDCTVLTIAHRLN--TVMDSDRV 1343 (1381)
T ss_pred ceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHh-cCCeEEEEeeccc--hhhhcCeE
Confidence 13557899999999999999999999999999999999999999999999987 4899999999975 56689999
Q ss_pred EEEecCcEEEEecCCCc
Q 000753 1078 LLLKRGGRVIYAGPLGH 1094 (1302)
Q Consensus 1078 ~~l~~gG~~~~~g~~~~ 1094 (1302)
+||++ |+++++|+|.+
T Consensus 1344 lVld~-G~v~EfdsP~~ 1359 (1381)
T KOG0054|consen 1344 LVLDA-GRVVEFDSPAE 1359 (1381)
T ss_pred EEeeC-CeEeecCChHH
Confidence 99986 89999998753
No 13
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.9e-67 Score=713.07 Aligned_cols=213 Identities=24% Similarity=0.303 Sum_probs=178.9
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1302)
..++|+|+++.++. +...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEe
Confidence 46999999987741 12359999999999999999999999999999999999766 357999999998
Q ss_pred CCh---hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000753 933 KNQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-------DSMVGLP 1002 (1302)
Q Consensus 933 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 1002 (1302)
+.+ ..+|+.++||||++.++.. |++|||.+.. .. .++.++++++..++.+.. |+.+|..
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~----tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~ 1371 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EH----NDADLWESLERAHLKDVIRRNSLGLDAEVSEA 1371 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CC----CHHHHHHHHHHcCcHHHHHhCccccCccccCC
Confidence 653 5678899999999999875 9999996531 11 234478888888876543 4445442
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
..+||||||||+||||||+++|+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1372 -G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~ 1447 (1622)
T PLN03130 1372 -GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA 1447 (1622)
T ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999985 5899999999975 5677999999985
Q ss_pred CcEEEEecCCCc
Q 000753 1083 GGRVIYAGPLGH 1094 (1302)
Q Consensus 1083 gG~~~~~g~~~~ 1094 (1302)
|++++.|++.+
T Consensus 1448 -G~IvE~Gt~~e 1458 (1622)
T PLN03130 1448 -GRVVEFDTPEN 1458 (1622)
T ss_pred -CEEEEeCCHHH
Confidence 89999998643
No 14
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=7.5e-67 Score=708.12 Aligned_cols=212 Identities=23% Similarity=0.293 Sum_probs=178.1
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1302)
..++|+|+++.++. +.+.+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEE
Confidence 46899999988731 12459999999999999999999999999999999999766 357999999998
Q ss_pred CC---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000753 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-------DSMVGLP 1002 (1302)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 1002 (1302)
+. ...+|+.++||||++.+++. |++|||.+.. +. .++.++++++..++.+.. |+.++.
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~----sdeei~~al~~a~l~~~I~~lp~GLdt~v~e- 1367 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EH----NDADLWEALERAHIKDVIDRNPFGLDAEVSE- 1367 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CC----CHHHHHHHHHHcCCHHHHHhCcCCCCceecC-
Confidence 64 35678899999999999875 9999996531 12 234478888888886543 444443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
+..+||||||||+||||||+++|+||+||||||+||+++++.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1368 ~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1368 GGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS 1444 (1495)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 345799999999999999999999999999999999999999999999875 5899999999974 5677999999985
Q ss_pred CcEEEEecCCC
Q 000753 1083 GGRVIYAGPLG 1093 (1302)
Q Consensus 1083 gG~~~~~g~~~ 1093 (1302)
|++++.|++.
T Consensus 1445 -G~ivE~Gt~~ 1454 (1495)
T PLN03232 1445 -GQVLEYDSPQ 1454 (1495)
T ss_pred -CEEEEECCHH
Confidence 8999999864
No 15
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-68 Score=662.64 Aligned_cols=424 Identities=36% Similarity=0.648 Sum_probs=359.2
Q ss_pred CCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc-eeEEEEEEc
Q 000753 851 QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKIS 929 (1302)
Q Consensus 851 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~ 929 (1302)
.+..+.|+|+++..+.+.. ..+++|+|||+.++|||++||||||||||||||++|+|+..+| ..+|+|.+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 4567899999887654321 3578999999999999999999999999999999999988764 689999999
Q ss_pred CccCChhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000753 930 GYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1302)
Q Consensus 930 g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1302)
|++.....+++.+|||+|+|.++|.+||+|+|.|+|.+|++...+.++++++|+++++.+||.+++|+.+|.++.+++||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999988899999999999999999999999999888899999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000753 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1302)
Q Consensus 1010 GqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~ 1089 (1302)
||||||+||.+|+.||+||||||||||||+.++..++++|+++|++|+|||||+|||+.++++.||++++|.+ |+++|.
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999996 799999
Q ss_pred cCCCcchhhHHHHHHhCCCCccccccCCccceEEEecccc-ccccccccHHHH------HhhchHHHHHHH-HHHhhcCC
Q 000753 1090 GPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNIS-VENQLGIDFAEV------YADSSLHQRNKE-LIKELSTP 1161 (1302)
Q Consensus 1090 g~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~-~~~~~~~~~~~~------~~~s~~~~~~~~-~~~~~~~~ 1161 (1302)
|++ +++.+||+++ |.| ||+.+||+||.+|+.+.. ..... ....+. ++......+... ..+.+...
T Consensus 253 G~~----~~~~~ff~~~-G~~-~P~~~Npadf~l~l~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL-GFP-CPELENPADFLLDLLSVDSGTREL-EEAVRIAKLINKFSQTDNLKKTLEALEKSLSTS 325 (613)
T ss_pred cCH----HHHHHHHHhC-CCC-CCCcCChHHHHHHHHccCCCchhH-HhHHHHHHHhhhccccchhhhhHHHHhhhcccc
Confidence 996 5789999998 655 999999999999987642 10000 001111 110111111100 01111111
Q ss_pred CCCCCCCCCCCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHHHHHHH
Q 000753 1162 PPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSI 1241 (1302)
Q Consensus 1162 ~~~~~~~~~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~~~~~ 1241 (1302)
. ..+.....+||.|+..|++|.+++.+|+|.+...|+++.+++|+++|++||+.+. +..+++++.|.+|+.
T Consensus 326 ----~--~~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~g~~~~~ 396 (613)
T KOG0061|consen 326 ----K--KVEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGN---DAKGIQNRLGLFFFI 396 (613)
T ss_pred ----c--ccccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCC---chHHHHHHHHHHHHH
Confidence 1 1111126899999999999999999999999999999999999999999999976 455666899999999
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHhcCCCcChHHHHHHHHHHHHhhH-HHHhhhhcc
Q 000753 1242 CIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVRNTFHLF-KNLMCFDSI 1299 (1302)
Q Consensus 1242 ~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~-~~~~~~~~~ 1299 (1302)
+.++.+..+..+++.|+.||.+|.||+.+|+|+..+|++|++++|+|+. +..++|.+|
T Consensus 397 ~~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i 455 (613)
T KOG0061|consen 397 LSFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSI 455 (613)
T ss_pred HHHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 8888888888889999999999999999999999999999999999974 444666554
No 16
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.5e-65 Score=604.15 Aligned_cols=474 Identities=27% Similarity=0.348 Sum_probs=358.5
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC-CCccceEEECCcccCCCCc-------cceEEEEccCC-
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD-LRASGKITYCGHELNEFVP-------QRTCAYISQHD- 254 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~-~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d- 254 (1302)
..+++||||++.+||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++||+|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 56999999999999999999999999999999999999876 4568999999997654432 26799999996
Q ss_pred -CCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccc
Q 000753 255 -LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADT 333 (1302)
Q Consensus 255 -~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 333 (1302)
.+.|-+||.+.|.-..+.++... ..+....+.++|+..||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 56677899998875544433211 11123346678999999987655
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCe
Q 000753 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1302)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ 413 (1302)
+...+.|||||||||.||+||+.+|++|++||||++||+.++.+|.+.|+++.++.|.+++++.|.+ .-+.+++|+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl-~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDL-GVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCH-HHHHHhcCe
Confidence 3455669999999999999999999999999999999999999999999999988887777776554 578889999
Q ss_pred EEEecCCeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhH
Q 000753 414 IILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQI 493 (1302)
Q Consensus 414 iilL~~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 493 (1302)
|+||.+|++|+.|+.+++.+. |. .||.. .+
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~--------p~-------------------------hpYT~-----------------~L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN--------PQ-------------------------HPYTR-----------------GL 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc--------cC-------------------------CcccH-----------------HH
Confidence 999999999999999988641 11 01100 00
Q ss_pred HhhhcCCCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCc
Q 000753 494 ASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGG 573 (1302)
Q Consensus 494 ~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~ 573 (1302)
.+. .|.. .....
T Consensus 255 l~a--~p~~-----------------------------------------------------------------~~~~~- 266 (539)
T COG1123 255 LAA--VPRL-----------------------------------------------------------------GDEKI- 266 (539)
T ss_pred Hhh--CCCc-----------------------------------------------------------------ccccc-
Confidence 000 0000 00000
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchHH
Q 000753 574 SRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAAS 653 (1302)
Q Consensus 574 ~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~ 653 (1302)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHHH
Q 000753 654 RFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVN 733 (1302)
Q Consensus 654 ~f~~~~l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~n 733 (1302)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhCCccccCCCCCCCcccchhHHHHhhcCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeeccchh
Q 000753 734 EFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEK 813 (1302)
Q Consensus 734 ef~~~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 813 (1302)
.+. ....+
T Consensus 267 -----~~~-~~~~~------------------------------------------------------------------ 274 (539)
T COG1123 267 -----IRL-PRRGP------------------------------------------------------------------ 274 (539)
T ss_pred -----ccc-ccccc------------------------------------------------------------------
Confidence 000 00000
Q ss_pred hhccCcccchhhhhhccccccccccccccCCccccccCCcEEEEeccceeeeccccccccccccccceeecccceeecCC
Q 000753 814 QRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPG 893 (1302)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G 893 (1302)
.+ ...-++++|++-.+..+.... ....+...+++||||.+++|
T Consensus 275 ----------------------------------~~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~l~~G 317 (539)
T COG1123 275 ----------------------------------LR-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFDLREG 317 (539)
T ss_pred ----------------------------------cc-cCceeEeeeeeeeeccccccc--cccccceeeeeeeeeEecCC
Confidence 00 001233444433332211000 00012357999999999999
Q ss_pred eEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC--C---hhhhcceeEEeccCC--CCCCCCCHHHHHHHHHH
Q 000753 894 VLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK--N---QETFARVSGYCEQND--IHSPYVTVYESLLYSAW 966 (1302)
Q Consensus 894 e~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~--~---~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~ 966 (1302)
|++||+|+||||||||.++|+|..++ ..|.|.++|.+. + ....++.+-+++||+ .+.|.+||++.+.....
T Consensus 318 E~lglVGeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~ 395 (539)
T COG1123 318 ETLGLVGESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLR 395 (539)
T ss_pred CEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHh
Confidence 99999999999999999999998764 479999999762 1 123456778888887 57899999999987654
Q ss_pred hhCCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHH
Q 000753 967 LRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1045 (1302)
Q Consensus 967 lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i 1045 (1302)
.... ....++++++.++++.++|.. +.+++ +.+||||||||+||||||+.+|++|++|||||.||+..+..|
T Consensus 396 ~~~~--~~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~V 468 (539)
T COG1123 396 IHGG--GSGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQV 468 (539)
T ss_pred hhcc--cchHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHH
Confidence 4332 224566778999999999986 56666 468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1046 MRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1046 ~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
.++|+++.++ |.|.|++|||++ -+...||++++|.+ |++++.||.
T Consensus 469 lnLl~~lq~e~g~t~lfISHDl~-vV~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 469 LNLLKDLQEELGLTYLFISHDLA-VVRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred HHHHHHHHHHhCCEEEEEeCCHH-HHHhhCceEEEEEC-CeEEEeCCH
Confidence 9999999754 999999999986 47778999999985 899999974
No 17
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=5.1e-65 Score=683.33 Aligned_cols=217 Identities=19% Similarity=0.306 Sum_probs=178.6
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc------------
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------ 920 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g------------ 920 (1302)
..++|+||+|.++.. ++.++|+|+||+|+||+++||+||||||||||+++|.|..++.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 469999999988531 1246999999999999999999999999999999999965531
Q ss_pred ----------------------------------------eeEEEEEEcCccCC---hhhhcceeEEeccCCCCCCCCCH
Q 000753 921 ----------------------------------------YIEGDIKISGYPKN---QETFARVSGYCEQNDIHSPYVTV 957 (1302)
Q Consensus 921 ----------------------------------------~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lTv 957 (1302)
+.+|+|.+||.++. ...+|+.+|||+|++.+| ..|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccH
Confidence 14799999999864 456788999999999998 5799
Q ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccc
Q 000753 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1302)
Q Consensus 958 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illL 1030 (1302)
+|||.|+. .+.+. +.++++++..++.++ .|+.+|.. ...||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~-----~~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK-----EDATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC-----CCCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999862 12222 336777777776543 46677744 457999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhcCeEEEEecC---cE-EEEecCC
Q 000753 1031 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRG---GR-VIYAGPL 1092 (1302)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~t~H~~~~~~~~~~D~i~~l~~g---G~-~~~~g~~ 1092 (1302)
|||||+||+.+++.|++.|+++. .+++|+|+++|+++ ..+.||+|++|+++ |+ +++.|+.
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 99999999999999999999986 36899999999974 56789999999872 66 5578874
No 18
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=3.8e-66 Score=648.42 Aligned_cols=434 Identities=27% Similarity=0.496 Sum_probs=349.2
Q ss_pred CCcEEEEeccceeeeccc----------------cccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhc
Q 000753 851 QPLSLTFDNMSYFVDMPA----------------EMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLA 914 (1302)
Q Consensus 851 ~~~~l~~~~v~~~~~~~~----------------~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~ 914 (1302)
.+..+.|.|++|.++... ..++..+.++++.+|+|||+++++||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 367889999999876442 1122233455678999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEEcCccCChhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc
Q 000753 915 GRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL 994 (1302)
Q Consensus 915 g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~ 994 (1302)
|+..++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|.+.++.+.....+++.+.++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9866444689999999987533 346689999999999999999999998877655444555666779999999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhc
Q 000753 995 NDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF 1074 (1302)
Q Consensus 995 ~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~ 1074 (1302)
.|+.+|....++||||||||++||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99998877778999999999999999999999999999999999999999999999998889999999999986788999
Q ss_pred CeEEEEecCcEEEEecCCCcchhhHHHHHHhCCCCccccccCCccceEEEecccccccc-----cc----ccHHHHHhhc
Q 000753 1075 DELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQ-----LG----IDFAEVYADS 1145 (1302)
Q Consensus 1075 D~i~~l~~gG~~~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~~-----~~----~~~~~~~~~s 1145 (1302)
|++++|++ |+++|.|+. +++.+||+++ |. +||..+|||||++|+++...... .. ....+.|+..
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~-G~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESV-GF-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHC-CC-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999985 799999986 5789999998 54 48999999999999976432100 00 0122334321
Q ss_pred hHHHHHHHHHHhh--cC-CCC-----CCCCCC-CCCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Q 000753 1146 SLHQRNKELIKEL--ST-PPP-----GSSDLY-FPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGL 1216 (1302)
Q Consensus 1146 ~~~~~~~~~~~~~--~~-~~~-----~~~~~~-~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~ 1216 (1302)
. .+..+..++.. .. +.+ ..+... ....+..+||+|+.+|++|++++ ||++.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 11111111110 00 000 001000 11235678999999999999998 99999999999999999999999
Q ss_pred HhccCCCCCCCHhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCCcChHHHHHHHHHHHHhh-HHHHhh
Q 000753 1217 IYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVRNTFHL-FKNLMC 1295 (1302)
Q Consensus 1217 ~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~-~~~~~~ 1295 (1302)
+||+++ ..+++++.|++|++++++++.+++.++|.|+.||+||+|||++|+|++.+|++|++++|+|+ ++..++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999974 46789999999999999998888889999999999999999999999999999999999997 444455
Q ss_pred hhcc
Q 000753 1296 FDSI 1299 (1302)
Q Consensus 1296 ~~~~ 1299 (1302)
|.+|
T Consensus 501 f~~i 504 (659)
T PLN03211 501 FLTV 504 (659)
T ss_pred HHhh
Confidence 5544
No 19
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2.9e-64 Score=683.80 Aligned_cols=212 Identities=21% Similarity=0.229 Sum_probs=178.4
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1302)
..++|+|+++.++.. ...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1283 g~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 469999999887521 1359999999999999999999999999999999999766 347999999998
Q ss_pred CCh---hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000753 933 KNQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-------DSMVGLP 1002 (1302)
Q Consensus 933 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 1002 (1302)
+.+ ..+|+.++||||++.+++. |++|||.... +.+ ++.++++++.+++.+.. |+.++..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 753 5678899999999999976 9999995211 122 34478889988886543 4445542
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
..+||||||||+||||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1419 -G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1419 -GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK 1494 (1522)
T ss_pred -CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999875 5899999999974 6678999999985
Q ss_pred CcEEEEecCCC
Q 000753 1083 GGRVIYAGPLG 1093 (1302)
Q Consensus 1083 gG~~~~~g~~~ 1093 (1302)
|++++.|++.
T Consensus 1495 -G~IvE~G~~~ 1504 (1522)
T TIGR00957 1495 -GEVAEFGAPS 1504 (1522)
T ss_pred -CEEEEECCHH
Confidence 8999999864
No 20
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-64 Score=623.10 Aligned_cols=461 Identities=23% Similarity=0.323 Sum_probs=349.0
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc----cceEEEEccCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1302)
+++|+|||+++++|++++|+|||||||||||++|+|.++|. ..+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 96 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVKE 96 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCCC
Confidence 46999999999999999999999999999999999998861 138999999998764332 3569999999999999
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
+||+||+.|+......+. . + .+ +....++.+++.+||++..++.+++
T Consensus 97 ~tv~e~l~~~~~~~~~~~-~----------------~-~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 143 (506)
T PRK13549 97 LSVLENIFLGNEITPGGI-M----------------D-YD-------------AMYLRAQKLLAQLKLDINPATPVGN-- 143 (506)
T ss_pred CcHHHHhhhcccccccCC-c----------------C-HH-------------HHHHHHHHHHHHcCCCCCcccchhh--
Confidence 999999988643210000 0 0 00 0012356688999999888888877
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|+|++|++
T Consensus 144 ---LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~~~tvi~~tH~~-~~~~~~~d~v~~l~~ 218 (506)
T PRK13549 144 ---LGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-HGIACIYISHKL-NEVKAISDTICVIRD 218 (506)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCcH-HHHHHhcCEEEEEEC
Confidence 999999999999999999999999999999999999999999999975 477888777654 577889999999999
Q ss_pred CeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHHhhhcC
Q 000753 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1302)
Q Consensus 420 G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 499 (1302)
|++++.|+.+++.. .+. .+
T Consensus 219 G~i~~~~~~~~~~~---------------~~~-----------------------------~~----------------- 237 (506)
T PRK13549 219 GRHIGTRPAAGMTE---------------DDI-----------------------------IT----------------- 237 (506)
T ss_pred CEEeeecccccCCH---------------HHH-----------------------------HH-----------------
Confidence 99998886543210 000 00
Q ss_pred CCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcchhHHH
Q 000753 500 PYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGA 579 (1302)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~ 579 (1302)
+ +.... .
T Consensus 238 ------------------------------~-----------------------------~~~~~-----~--------- 244 (506)
T PRK13549 238 ------------------------------M-----------------------------MVGRE-----L--------- 244 (506)
T ss_pred ------------------------------H-----------------------------hhCcC-----c---------
Confidence 0 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchHHHHHHHH
Q 000753 580 LFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQF 659 (1302)
Q Consensus 580 lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 659 (1302)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHHHHhhCCc
Q 000753 660 LAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGR 739 (1302)
Q Consensus 660 l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~nef~~~~ 739 (1302)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCcccchhHHHHhhcCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeeccchhhhccCc
Q 000753 740 WDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGH 819 (1302)
Q Consensus 740 ~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1302)
. . . . +
T Consensus 245 ------~----~------~-------------------------------------~-~--------------------- 249 (506)
T PRK13549 245 ------T----A------L-------------------------------------Y-P--------------------- 249 (506)
T ss_pred ------c----c------c-------------------------------------c-c---------------------
Confidence 0 0 0 0 0
Q ss_pred ccchhhhhhccccccccccccccCCccccccCCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEe
Q 000753 820 EAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALM 899 (1302)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 899 (1302)
. . . .. . ....+.++|+++.++. .+++.+|+||||+|++||++||+
T Consensus 250 ------~--~-~--~~------~--------~~~~l~~~~l~~~~~~----------~~~~~vl~~vsl~i~~Ge~~~l~ 294 (506)
T PRK13549 250 ------R--E-P--HT------I--------GEVILEVRNLTAWDPV----------NPHIKRVDDVSFSLRRGEILGIA 294 (506)
T ss_pred ------c--c-c--cC------C--------CCceEEEecCcccccc----------ccccccccceeeEEcCCcEEEEe
Confidence 0 0 0 00 0 0012466666643310 01245999999999999999999
Q ss_pred cCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh----hhhcceeEEeccCC---CCCCCCCHHHHHHHHHHhhCC--
Q 000753 900 GVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQND---IHSPYVTVYESLLYSAWLRLS-- 970 (1302)
Q Consensus 900 G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l~~~~~lr~~-- 970 (1302)
||||||||||+++|+|...+ +.+|+|.++|.+... ...++.+||++|++ .+++.+||.||+.+.......
T Consensus 295 G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~ 373 (506)
T PRK13549 295 GLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGG 373 (506)
T ss_pred CCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccC
Confidence 99999999999999997541 137999999976532 12345689999995 477889999999875321111
Q ss_pred CCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHH
Q 000753 971 SDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTV 1049 (1302)
Q Consensus 971 ~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l 1049 (1302)
.....+...+.++++++.+++. +..++.+ ..|||||||||+||+||+.+|+||||||||+|||+.++..+++.|
T Consensus 374 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l 448 (506)
T PRK13549 374 SRIDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLI 448 (506)
T ss_pred cccChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHH
Confidence 0012233445688999999996 4666664 479999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCcc
Q 000753 1050 RNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHE 1095 (1302)
Q Consensus 1050 ~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~~ 1095 (1302)
++++++|+|||++||+++ ++.+.||++++|.+ |+++..|+..+.
T Consensus 449 ~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~~ 492 (506)
T PRK13549 449 NQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHNL 492 (506)
T ss_pred HHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEeccccC
Confidence 999888999999999986 57788999999985 789888876543
No 21
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=3.8e-64 Score=620.01 Aligned_cols=450 Identities=22% Similarity=0.332 Sum_probs=346.2
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC----ccceEEEEccCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV----PQRTCAYISQHDLHHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 259 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 46999999999999999999999999999999999999887 999999998875432 13569999999999999
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
+||+||+.|+.........+ +. .+....++.+++.+||++..|..+++
T Consensus 94 ~tv~e~l~~~~~~~~~~~~~-----------------~~-------------~~~~~~~~~~l~~~~l~~~~~~~~~~-- 141 (501)
T PRK10762 94 LTIAENIFLGREFVNRFGRI-----------------DW-------------KKMYAEADKLLARLNLRFSSDKLVGE-- 141 (501)
T ss_pred CcHHHHhhhccccccccCcc-----------------CH-------------HHHHHHHHHHHHHcCCCCCccCchhh--
Confidence 99999998864321000000 00 00012346689999999988888887
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++. +.|+|++.|++ .++.++||+|++|++
T Consensus 142 ---LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~-~~tvii~sHd~-~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 142 ---LSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQ-GRGIVYISHRL-KEIFEICDDVTVFRD 216 (501)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCH-HHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999999999999999999999764 77887777655 578899999999999
Q ss_pred CeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHHhhhcC
Q 000753 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1302)
Q Consensus 420 G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 499 (1302)
|+++..|+.+++.. .+ ..+.
T Consensus 217 G~i~~~~~~~~~~~---------------~~-----------------------------~~~~---------------- 236 (501)
T PRK10762 217 GQFIAEREVADLTE---------------DS-----------------------------LIEM---------------- 236 (501)
T ss_pred CEEEEecCcCcCCH---------------HH-----------------------------HHHH----------------
Confidence 99998776543200 00 0000
Q ss_pred CCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcchhHHH
Q 000753 500 PYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGA 579 (1302)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~ 579 (1302)
++ .
T Consensus 237 ------------------------------------------------------------~~--~--------------- 239 (501)
T PRK10762 237 ------------------------------------------------------------MV--G--------------- 239 (501)
T ss_pred ------------------------------------------------------------hc--C---------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchHHHHHHHH
Q 000753 580 LFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQF 659 (1302)
Q Consensus 580 lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 659 (1302)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T PRK10762 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHHHHhhCCc
Q 000753 660 LAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGR 739 (1302)
Q Consensus 660 l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~nef~~~~ 739 (1302)
.+
T Consensus 240 ------------------------------------------------------------------------------~~ 241 (501)
T PRK10762 240 ------------------------------------------------------------------------------RK 241 (501)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 00
Q ss_pred cccCCCCCCCcccchhHHHHhhcCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeeccchhhhccCc
Q 000753 740 WDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGH 819 (1302)
Q Consensus 740 ~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1302)
.....+.
T Consensus 242 ~~~~~~~------------------------------------------------------------------------- 248 (501)
T PRK10762 242 LEDQYPR------------------------------------------------------------------------- 248 (501)
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 0000000
Q ss_pred ccchhhhhhccccccccccccccCCccccccCCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEe
Q 000753 820 EAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALM 899 (1302)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 899 (1302)
. . . + + .+..++++|++. .+|+|+||+|++||++||+
T Consensus 249 ------~---------~-~---~------~-~~~~l~~~~l~~------------------~~l~~vsl~i~~Ge~~~li 284 (501)
T PRK10762 249 ------L---------D-K---A------P-GEVRLKVDNLSG------------------PGVNDVSFTLRKGEILGVS 284 (501)
T ss_pred ------c---------c-c---C------C-CCcEEEEeCccc------------------CCcccceEEEcCCcEEEEe
Confidence 0 0 0 0 0 011345666541 2699999999999999999
Q ss_pred cCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh----hhhcceeEEeccCC---CCCCCCCHHHHHHHHHHhhC-C-
Q 000753 900 GVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQND---IHSPYVTVYESLLYSAWLRL-S- 970 (1302)
Q Consensus 900 G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l~~~~~lr~-~- 970 (1302)
||||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++ .+++.+||.|++.+...... .
T Consensus 285 G~NGsGKSTLl~~l~G~~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~ 362 (501)
T PRK10762 285 GLMGAGRTELMKVLYGALP--RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRA 362 (501)
T ss_pred cCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhccc
Confidence 9999999999999999765 347999999977532 22345799999996 47788999999987532111 0
Q ss_pred -CCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHH
Q 000753 971 -SDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRT 1048 (1302)
Q Consensus 971 -~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~ 1048 (1302)
.....++..+.++++++.++|. +..++.+ ..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.
T Consensus 363 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 437 (501)
T PRK10762 363 GGSLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQL 437 (501)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHH
Confidence 0012233345688999999995 5667664 47999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCc
Q 000753 1049 VRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1302)
Q Consensus 1049 l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~ 1094 (1302)
|++++++|+|||++||+++ .+...||++++|++ |+++..|+..+
T Consensus 438 l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 438 INQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred HHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 9999878999999999986 57788999999985 78988888654
No 22
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=7.9e-65 Score=637.77 Aligned_cols=411 Identities=35% Similarity=0.573 Sum_probs=348.7
Q ss_pred cceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc-eeEEEEEEcCccCChhhhcceeEEeccCCCCCCCCCH
Q 000753 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTV 957 (1302)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 957 (1302)
++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.+...+++.+|||+|+|.+++.+||
T Consensus 37 ~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV 116 (617)
T TIGR00955 37 RKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTV 116 (617)
T ss_pred ccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcH
Confidence 467999999999999999999999999999999999976543 3579999999988766778889999999999999999
Q ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCC-CCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 000753 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1036 (1302)
Q Consensus 958 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~-~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsg 1036 (1302)
+|||.|++.++.+.....+++.+.++++++.++|.++.|+.+|.++ .++||||||||++||+||+.+|++|||||||+|
T Consensus 117 ~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsg 196 (617)
T TIGR00955 117 REHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTSG 196 (617)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcc
Confidence 9999999988877666667777889999999999999999998753 578999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCcchhhHHHHHHhCCCCccccccC
Q 000753 1037 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAY 1116 (1302)
Q Consensus 1037 LD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~ 1116 (1302)
||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|.|+. +++.+||+++ |. +||++.
T Consensus 197 LD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~-g~-~~p~~~ 269 (617)
T TIGR00955 197 LDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDL-GH-PCPENY 269 (617)
T ss_pred hhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHc-CC-CCCCCC
Confidence 999999999999999988899999999999878999999999998 5899999996 5688999998 54 589999
Q ss_pred CccceEEEecccccccccc-----ccHHHHHhhchHHHHHHHHHHhhcCCCCC---CCCCCCCCccCCcHHHHHHHHHHH
Q 000753 1117 NPATWMLEVSNISVENQLG-----IDFAEVYADSSLHQRNKELIKELSTPPPG---SSDLYFPTKYSQPFLTQFRACFWK 1188 (1302)
Q Consensus 1117 npa~~~l~~~~~~~~~~~~-----~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~q~~~l~~r 1188 (1302)
|||||++++.+...+.... .++.+.|+.|+.+++..+.......+.++ ..+....++|..+++.|+..|++|
T Consensus 270 n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R 349 (617)
T TIGR00955 270 NPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKR 349 (617)
T ss_pred ChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHHH
Confidence 9999999987643322111 23445666666555443333221111111 111112346789999999999999
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHh
Q 000753 1189 QYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRER 1268 (1302)
Q Consensus 1189 ~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~er~v~~rE~ 1268 (1302)
+++++||||.+..+|+++.+++|+++|++||+++. ++++++++.|++|++++++++.+++.+++.++.||.+|+|||
T Consensus 350 ~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~ 426 (617)
T TIGR00955 350 SWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRET 426 (617)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999986 467889999999999999988887888999999999999999
Q ss_pred cCCCcChHHHHHHHHHHHHhh-HHHHhhhhcc
Q 000753 1269 AAGMFAAMPYALAQVRNTFHL-FKNLMCFDSI 1299 (1302)
Q Consensus 1269 ~~~~Y~~~~y~~a~~~~e~p~-~~~~~~~~~~ 1299 (1302)
++|+|++.+|++|++++|+|+ ++..++|.+|
T Consensus 427 ~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i 458 (617)
T TIGR00955 427 RSGLYRVSAYFLAKTIAELPLFIILPALFTSI 458 (617)
T ss_pred cCCccCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999997 3333445443
No 23
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-64 Score=623.27 Aligned_cols=458 Identities=22% Similarity=0.299 Sum_probs=346.6
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc----cceEEEEccCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 45999999999999999999999999999999999999887 9999999998765432 2469999999999999
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
+||+||+.++...... .+.. ... +. .+....++.+++.+||++..|+.+++
T Consensus 95 ~tv~e~l~~~~~~~~~--~~~~-----------~~~-~~-------------~~~~~~~~~~l~~~gl~~~~~~~~~~-- 145 (510)
T PRK09700 95 LTVLENLYIGRHLTKK--VCGV-----------NII-DW-------------REMRVRAAMMLLRVGLKVDLDEKVAN-- 145 (510)
T ss_pred CcHHHHhhhccccccc--cccc-----------ccc-CH-------------HHHHHHHHHHHHHcCCCCCcccchhh--
Confidence 9999999875321000 0000 000 00 00112356689999999888988877
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +.|+|++.|+ ..++.+++|+|++|++
T Consensus 146 ---LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tiiivsHd-~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 146 ---LSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKE-GTAIVYISHK-LAEIRRICDRYTVMKD 220 (510)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeCC-HHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999999764 7787777665 4578889999999999
Q ss_pred CeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHHhhhcC
Q 000753 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1302)
Q Consensus 420 G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 499 (1302)
|++++.|+++++.. .+.. +.
T Consensus 221 G~i~~~g~~~~~~~---------------~~~~-----------------------------~~---------------- 240 (510)
T PRK09700 221 GSSVCSGMVSDVSN---------------DDIV-----------------------------RL---------------- 240 (510)
T ss_pred CEEeeecchhhCCH---------------HHHH-----------------------------HH----------------
Confidence 99999887654310 0000 00
Q ss_pred CCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcchhHHH
Q 000753 500 PYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGA 579 (1302)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~ 579 (1302)
+.... ..
T Consensus 241 ------------------------------------------------------------~~~~~-----~~-------- 247 (510)
T PRK09700 241 ------------------------------------------------------------MVGRE-----LQ-------- 247 (510)
T ss_pred ------------------------------------------------------------hcCCC-----cc--------
Confidence 00000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchHHHHHHHH
Q 000753 580 LFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQF 659 (1302)
Q Consensus 580 lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 659 (1302)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHHHHhhCCc
Q 000753 660 LAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGR 739 (1302)
Q Consensus 660 l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~nef~~~~ 739 (1302)
+ .
T Consensus 248 ----------------------------------------------~--------------------------------~ 249 (510)
T PRK09700 248 ----------------------------------------------N--------------------------------R 249 (510)
T ss_pred ----------------------------------------------c--------------------------------c
Confidence 0 0
Q ss_pred cccCCCCCCCcccchhHHHHhhcCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeeccchhhhccCc
Q 000753 740 WDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGH 819 (1302)
Q Consensus 740 ~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1302)
. .. .
T Consensus 250 ~----~~----~-------------------------------------------------------------------- 253 (510)
T PRK09700 250 F----NA----M-------------------------------------------------------------------- 253 (510)
T ss_pred c----cc----c--------------------------------------------------------------------
Confidence 0 00 0
Q ss_pred ccchhhhhhccccccccccccccCCccccccCCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEe
Q 000753 820 EAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALM 899 (1302)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 899 (1302)
.+. .. . .. .+..+.++|++... ..+|+||||+|++||++||+
T Consensus 254 --------~~~----~~-~---~~-------~~~~l~~~~l~~~~---------------~~~l~~isl~i~~Ge~~~l~ 295 (510)
T PRK09700 254 --------KEN----VS-N---LA-------HETVFEVRNVTSRD---------------RKKVRDISFSVCRGEILGFA 295 (510)
T ss_pred --------ccc----cc-c---CC-------CCcEEEEeCccccC---------------CCcccceeEEEcCCcEEEEE
Confidence 000 00 0 00 01135677766321 13899999999999999999
Q ss_pred cCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh----hhhcceeEEeccC---CCCCCCCCHHHHHHHHHHhh---C
Q 000753 900 GVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQN---DIHSPYVTVYESLLYSAWLR---L 969 (1302)
Q Consensus 900 G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~---~~~~~~lTv~E~l~~~~~lr---~ 969 (1302)
||||||||||+++|+|..++ .+|+|.++|.++.. ...++.+|||+|+ ..+++.+||.||+.+....+ .
T Consensus 296 G~NGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~ 373 (510)
T PRK09700 296 GLVGSGRTELMNCLFGVDKR--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGY 373 (510)
T ss_pred CCCCCCHHHHHHHHhCCCcC--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccc
Confidence 99999999999999997653 47999999976532 1234579999998 45788999999998753211 0
Q ss_pred CC--C-CcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHH
Q 000753 970 SS--D-VDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1045 (1302)
Q Consensus 970 ~~--~-~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i 1045 (1302)
.. . .......+.++++++.+++. +..++.+ ..|||||||||+|||+|+.+|+||||||||+|||+.++..+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l 448 (510)
T PRK09700 374 KGAMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEI 448 (510)
T ss_pred cccccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHH
Confidence 00 0 11222335678999999996 6677764 47999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1046 MRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1046 ~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
++.|++++++|.|||++||++. .+...||++++|++ |+++..++.
T Consensus 449 ~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 449 YKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred HHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 9999999878999999999986 57788999999986 788887764
No 24
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-63 Score=628.41 Aligned_cols=488 Identities=21% Similarity=0.235 Sum_probs=351.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccC----------CCC------c-cce
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELN----------EFV------P-QRT 246 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~----------~~~------~-~~~ 246 (1302)
.++|+|||+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|..++ ... . ++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999887 899999986431 100 1 246
Q ss_pred EEEEccCC--CCCCCCCHHHHHHhhhhcc-CCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHH
Q 000753 247 CAYISQHD--LHHGEMTVRETLDFSGRCL-GVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLK 323 (1302)
Q Consensus 247 ~~yv~Q~d--~~~~~lTVrE~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (1302)
+|||+|++ .+++.+||+||+.++.+.. +.. + .+....++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS----------R------------------------EEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHH
Confidence 99999997 6788899999999875431 110 0 001123567899
Q ss_pred HcCCcc---cccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEE
Q 000753 324 ILGLDI---CADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVAL 400 (1302)
Q Consensus 324 ~lgL~~---~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~ 400 (1302)
.+||++ ..+..+.+ |||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++..+.|+|++.
T Consensus 152 ~~gL~~~~~~~~~~~~~-----LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~it 226 (623)
T PRK10261 152 QVRIPEAQTILSRYPHQ-----LSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFIT 226 (623)
T ss_pred HCCCCChhhHHhCCCcc-----CCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 999964 46777766 9999999999999999999999999999999999999999999999876677877765
Q ss_pred ecCchhHHhhcCeEEEecCCeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHH
Q 000753 401 LQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDF 480 (1302)
Q Consensus 401 ~q~~~e~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~ 480 (1302)
|. ..++.+++|+|++|++|++++.|+++++.+ .|.+.-..+++..
T Consensus 227 Hd-l~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l~~~-------------------------- 271 (623)
T PRK10261 227 HD-MGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRALLAA-------------------------- 271 (623)
T ss_pred CC-HHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhhhhc--------------------------
Confidence 54 567889999999999999999998876521 0000000000000
Q ss_pred HHHHHhChhcHhHHhhhcCCCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHh
Q 000753 481 VEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVY 560 (1302)
Q Consensus 481 ~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf 560 (1302)
.+
T Consensus 272 ------------------~~------------------------------------------------------------ 273 (623)
T PRK10261 272 ------------------VP------------------------------------------------------------ 273 (623)
T ss_pred ------------------cC------------------------------------------------------------
Confidence 00
Q ss_pred hcccCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHH
Q 000753 561 FRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVA 640 (1302)
Q Consensus 561 ~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~ 640 (1302)
+. ....+. .
T Consensus 274 -~~----~~~~~~------------------------------------~------------------------------ 282 (623)
T PRK10261 274 -QL----GAMKGL------------------------------------D------------------------------ 282 (623)
T ss_pred -cc----cccccc------------------------------------c------------------------------
Confidence 00 000000 0
Q ss_pred HHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHH
Q 000753 641 LTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYI 720 (1302)
Q Consensus 641 i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~i 720 (1302)
.+. ..+.
T Consensus 283 ----------------------------------------------------------------~~~-~~~~-------- 289 (623)
T PRK10261 283 ----------------------------------------------------------------YPR-RFPL-------- 289 (623)
T ss_pred ----------------------------------------------------------------CCc-cccc--------
Confidence 000 0000
Q ss_pred cHHHHHHHHHHHHHhhCCccccCCCCCCCcccchhHHHHhhcCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 000753 721 SPMMYGQTSLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIG 800 (1302)
Q Consensus 721 sp~~Y~~~al~~nef~~~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~ 800 (1302)
-....+. .
T Consensus 290 -------------------~~~~~~~----~------------------------------------------------- 297 (623)
T PRK10261 290 -------------------ISLEHPA----K------------------------------------------------- 297 (623)
T ss_pred -------------------ccccccc----c-------------------------------------------------
Confidence 0000000 0
Q ss_pred CCCcceeeccchhhhccCcccchhhhhhccccccccccccccCCccccccCCcEEEEeccceeeeccccccccccccccc
Q 000753 801 DSNSTVIEEDGEKQRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRL 880 (1302)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~ 880 (1302)
. . . . . . . .. . +.....++++|+++.++..... .+.....+
T Consensus 298 -~-----------~-~-~---~-----~------~--~~--~------~~~~~~L~~~~l~~~y~~~~~~--~~~~~~~~ 337 (623)
T PRK10261 298 -Q-----------E-P-P---I-----E------Q--DT--V------VDGEPILQVRNLVTRFPLRSGL--LNRVTREV 337 (623)
T ss_pred -c-----------C-c-c---c-----c------c--cc--c------cCCCceEEEeeeEEEEcCCCcc--ccccCCce
Confidence 0 0 0 0 0 0 0 00 0 0001136788887765321000 00000124
Q ss_pred eeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh------hhhcceeEEeccCC--CCC
Q 000753 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQND--IHS 952 (1302)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~~~ 952 (1302)
.+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++||+|++ .++
T Consensus 338 ~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~ 415 (623)
T PRK10261 338 HAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLD 415 (623)
T ss_pred EEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcC
Confidence 69999999999999999999999999999999999765 347999999986532 12456799999997 588
Q ss_pred CCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcccc
Q 000753 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1302)
Q Consensus 953 ~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLD 1031 (1302)
+.+||.|++.+....+. ....++..+.+.++++.++|. +..++. +..|||||||||+|||||+.+|+|||||
T Consensus 416 ~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~~~LSgGqrQRv~iAraL~~~p~llllD 488 (623)
T PRK10261 416 PRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRY-----PHEFSGGQRQRICIARALALNPKVIIAD 488 (623)
T ss_pred CCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 89999999987643321 112334456788999999995 456665 4579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1032 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
|||+|||+.++..++++|++++++ |.|||++||+++ .+...||++++|.+ |++++.|+..
T Consensus 489 EPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~~ 549 (623)
T PRK10261 489 EAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPRR 549 (623)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 999999999999999999999765 899999999986 57778999999985 7999998753
No 25
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=6e-63 Score=668.76 Aligned_cols=212 Identities=23% Similarity=0.260 Sum_probs=178.4
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1302)
..+.|+||++.++. +...+|+||||+|+|||++||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 46999999988742 12359999999999999999999999999999999999766 357999999998
Q ss_pred CC---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000753 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-------DSMVGLP 1002 (1302)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 1002 (1302)
+. ...+|+.+|||||++.+++. |++|||... .+.+ ++.++++++.+++.+.. |+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 64 35678899999999999875 999999431 1222 34588999999887643 4455543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhC-CCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1003 GVSGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~-P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
..+||||||||+||||||+++ |+||+||||||+||+++.+.|++.|++.. +++|||+++|++ +....||+|++|+
T Consensus 1443 -G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl--~ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 -GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRL--HTVAQYDKIIVMD 1518 (1560)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccH--HHHHhCCEEEEEE
Confidence 457999999999999999996 89999999999999999999999999875 479999999996 4678899999998
Q ss_pred cCcEEEEecCCC
Q 000753 1082 RGGRVIYAGPLG 1093 (1302)
Q Consensus 1082 ~gG~~~~~g~~~ 1093 (1302)
+ |++++.|++.
T Consensus 1519 ~-G~VvE~Gt~~ 1529 (1560)
T PTZ00243 1519 H-GAVAEMGSPR 1529 (1560)
T ss_pred C-CEEEEECCHH
Confidence 5 8999999863
No 26
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.8e-63 Score=614.49 Aligned_cols=454 Identities=21% Similarity=0.280 Sum_probs=344.2
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc----cceEEEEccCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1302)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 24 ~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 24 VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 45999999999999999999999999999999999999887 9999999988754322 2469999999999999
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
+||+||+.|..... + + ....++.+++.+||++..++.+++
T Consensus 101 ~tv~e~l~~~~~~~------~---~-----------------------------~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (510)
T PRK15439 101 LSVKENILFGLPKR------Q---A-----------------------------SMQKMKQLLAALGCQLDLDSSAGS-- 140 (510)
T ss_pred CcHHHHhhcccccc------h---H-----------------------------HHHHHHHHHHHcCCCccccCChhh--
Confidence 99999998753100 0 0 011245688999999888888877
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +.|+|++.|++ .++.++||+|++|++
T Consensus 141 ---LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-g~tiiivtHd~-~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 141 ---LEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQ-GVGIVFISHKL-PEIRQLADRISVMRD 215 (510)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCH-HHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999999764 77877776654 577889999999999
Q ss_pred CeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHHhhhcC
Q 000753 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1302)
Q Consensus 420 G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 499 (1302)
|++++.|+++++... +.. +.+..
T Consensus 216 G~i~~~g~~~~~~~~---------------~~~-----------------------------~~~~~------------- 238 (510)
T PRK15439 216 GTIALSGKTADLSTD---------------DII-----------------------------QAITP------------- 238 (510)
T ss_pred CEEEEecChHHcCHH---------------HHH-----------------------------HHHhC-------------
Confidence 999999987654210 000 00000
Q ss_pred CCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcchhHHH
Q 000753 500 PYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGA 579 (1302)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~ 579 (1302)
.. .. .....
T Consensus 239 ---~~-~~------------------------------------------------------------~~~~~------- 247 (510)
T PRK15439 239 ---AA-RE------------------------------------------------------------KSLSA------- 247 (510)
T ss_pred ---cc-cc------------------------------------------------------------ccccc-------
Confidence 00 00 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchHHHHHHHH
Q 000753 580 LFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQF 659 (1302)
Q Consensus 580 lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 659 (1302)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHHHHhhCCc
Q 000753 660 LAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGR 739 (1302)
Q Consensus 660 l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~nef~~~~ 739 (1302)
.. .
T Consensus 248 --------------------------------------------------~~---------------------------~ 250 (510)
T PRK15439 248 --------------------------------------------------SQ---------------------------K 250 (510)
T ss_pred --------------------------------------------------cc---------------------------c
Confidence 00 0
Q ss_pred cccCCCCCCCcccchhHHHHhhcCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeeccchhhhccCc
Q 000753 740 WDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGH 819 (1302)
Q Consensus 740 ~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1302)
+. . .+
T Consensus 251 ~~----~----------------~~------------------------------------------------------- 255 (510)
T PRK15439 251 LW----L----------------EL------------------------------------------------------- 255 (510)
T ss_pred cc----c----------------cc-------------------------------------------------------
Confidence 00 0 00
Q ss_pred ccchhhhhhccccccccccccccCCccccccCCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEe
Q 000753 820 EAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALM 899 (1302)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 899 (1302)
+.. .. .. + ..+..+.++|++. .+|+|||++|++|+++||+
T Consensus 256 ---------~~~---~~-~~--~-------~~~~~l~~~~l~~------------------~~l~~isl~i~~Ge~~~l~ 295 (510)
T PRK15439 256 ---------PGN---RR-QQ--A-------AGAPVLTVEDLTG------------------EGFRNISLEVRAGEILGLA 295 (510)
T ss_pred ---------ccc---cc-cc--C-------CCCceEEEeCCCC------------------CCccceeEEEcCCcEEEEE
Confidence 000 00 00 0 0011356666651 1599999999999999999
Q ss_pred cCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChh----hhcceeEEeccCC---CCCCCCCHHHHHHHHHHhhCCCC
Q 000753 900 GVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE----TFARVSGYCEQND---IHSPYVTVYESLLYSAWLRLSSD 972 (1302)
Q Consensus 900 G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~E~l~~~~~lr~~~~ 972 (1302)
||||||||||+++|+|... +.+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++......+....
T Consensus 296 G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~ 373 (510)
T PRK15439 296 GVVGAGRTELAETLYGLRP--ARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFW 373 (510)
T ss_pred CCCCCCHHHHHHHHcCCCC--CCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccc
Confidence 9999999999999999765 3479999999865321 1345689999984 47888999999864211111100
Q ss_pred CcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHH
Q 000753 973 VDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN 1051 (1302)
Q Consensus 973 ~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~ 1051 (1302)
......++.++++++.++|. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++
T Consensus 374 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~ 448 (510)
T PRK15439 374 IKPARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRS 448 (510)
T ss_pred cChHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHH
Confidence 11122345688999999997 6667664 47999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCc
Q 000753 1052 TVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1302)
Q Consensus 1052 ~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~ 1094 (1302)
++++|.|||++||+++ ++.+.||++++|.+ |++++.|..++
T Consensus 449 l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~~ 489 (510)
T PRK15439 449 IAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGAA 489 (510)
T ss_pred HHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcccc
Confidence 9878999999999986 57788999999985 78988887643
No 27
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2.9e-62 Score=662.19 Aligned_cols=211 Identities=22% Similarity=0.269 Sum_probs=178.0
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1302)
..++|+||++.++. +.+.+|+|||++|+|||++||+|+||||||||+++|+|... .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 46999999988742 12469999999999999999999999999999999999764 37999999998
Q ss_pred CCh---hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000753 933 KNQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1302)
Q Consensus 933 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1302)
+.. ..+|+.++||||++.+++. |++|||.... . ..++.++++++.++|.+. .|+.++.
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~----~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e- 1349 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------Q----WSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVD- 1349 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------C----CCHHHHHHHHHHCCCHHHHHhCcccccccccc-
Confidence 753 5678899999999999975 9999994321 1 124458899999998654 3444543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
+..+||||||||+||||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1350 ~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1350 GGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred CCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 345799999999999999999999999999999999999999999999875 4799999999974 6678999999985
Q ss_pred CcEEEEecCCC
Q 000753 1083 GGRVIYAGPLG 1093 (1302)
Q Consensus 1083 gG~~~~~g~~~ 1093 (1302)
|++++.|++.
T Consensus 1427 -G~ivE~g~p~ 1436 (1490)
T TIGR01271 1427 -SSVKQYDSIQ 1436 (1490)
T ss_pred -CEEEEeCCHH
Confidence 8999999863
No 28
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.6e-63 Score=615.79 Aligned_cols=445 Identities=23% Similarity=0.312 Sum_probs=341.1
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCc--CCCCCccceEEECC-----------------------ccc
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKL--GKDLRASGKITYCG-----------------------HEL 238 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~--~~~~~~~G~I~~~G-----------------------~~~ 238 (1302)
+++|+|+|+.+.+|++++|+|||||||||||++|+|.+ +|+ +|+|.++| .++
T Consensus 13 ~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 89 (520)
T TIGR03269 13 KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTL 89 (520)
T ss_pred eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccccccccccccccc
Confidence 46999999999999999999999999999999999996 566 89999972 221
Q ss_pred C-------C------CCccceEEEEccC-CCCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHH
Q 000753 239 N-------E------FVPQRTCAYISQH-DLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFM 304 (1302)
Q Consensus 239 ~-------~------~~~~~~~~yv~Q~-d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~ 304 (1302)
. . ...++.++||+|+ +.+++.+||+||+.|.....+.. ..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~----------~~---------------- 143 (520)
T TIGR03269 90 EPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYE----------GK---------------- 143 (520)
T ss_pred cccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCC----------HH----------------
Confidence 0 0 0123569999997 67888899999998864322110 00
Q ss_pred HHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH
Q 000753 305 KAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKF 384 (1302)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~ 384 (1302)
+....++.+++.+||++..+..+++ |||||||||+||+||+.+|++|||||||+|||+.++.++.+.
T Consensus 144 --------~~~~~~~~~l~~~gl~~~~~~~~~~-----LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 210 (520)
T TIGR03269 144 --------EAVGRAVDLIEMVQLSHRITHIARD-----LSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA 210 (520)
T ss_pred --------HHHHHHHHHHHHcCChhhhhcCccc-----CCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH
Confidence 0112356789999999888888876 999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhh
Q 000753 385 LKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQY 464 (1302)
Q Consensus 385 L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~ 464 (1302)
|+++++..+.|+|++.|++ ..+.++||+|++|++|++++.|+++++.+.+..
T Consensus 211 l~~l~~~~g~tviivtHd~-~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~--------------------------- 262 (520)
T TIGR03269 211 LEEAVKASGISMVLTSHWP-EVIEDLSDKAIWLENGEIKEEGTPDEVVAVFME--------------------------- 262 (520)
T ss_pred HHHHHHhcCcEEEEEeCCH-HHHHHhcCEEEEEeCCEEeeecCHHHHHHHHHh---------------------------
Confidence 9999765578888877665 467789999999999999988876543110000
Q ss_pred hhhcCCCCCCCChhHHHHHHHhChhcHhHHhhhcCCCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHH
Q 000753 465 WFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIF 544 (1302)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~ 544 (1302)
T Consensus 263 -------------------------------------------------------------------------------- 262 (520)
T TIGR03269 263 -------------------------------------------------------------------------------- 262 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHH
Q 000753 545 KTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIW 624 (1302)
Q Consensus 545 ~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~ 624 (1302)
...
T Consensus 263 ------------------------~~~----------------------------------------------------- 265 (520)
T TIGR03269 263 ------------------------GVS----------------------------------------------------- 265 (520)
T ss_pred ------------------------hch-----------------------------------------------------
Confidence 000
Q ss_pred HHhhcHHHHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhc
Q 000753 625 LLRIPISILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFV 704 (1302)
Q Consensus 625 l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~ 704 (1302)
.
T Consensus 266 --------------------------~----------------------------------------------------- 266 (520)
T TIGR03269 266 --------------------------E----------------------------------------------------- 266 (520)
T ss_pred --------------------------h-----------------------------------------------------
Confidence 0
Q ss_pred ccCCCchhHHHHHHHHcHHHHHHHHHHHHHhhCCccccCCCCCCCcccchhHHHHhhcCccccCchhhHHHHHHHHHHHH
Q 000753 705 MAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFL 784 (1302)
Q Consensus 705 i~~~~ip~~~~W~~~isp~~Y~~~al~~nef~~~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~ 784 (1302)
+ . .
T Consensus 267 -----~-----------------------------------~----~--------------------------------- 269 (520)
T TIGR03269 267 -----V-----------------------------------E----K--------------------------------- 269 (520)
T ss_pred -----h-----------------------------------c----c---------------------------------
Confidence 0 0 0
Q ss_pred HHHHHHHHHHhcCCCCCCCcceeeccchhhhccCcccchhhhhhccccccccccccccCCccccccCCcEEEEeccceee
Q 000753 785 FNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFV 864 (1302)
Q Consensus 785 f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~ 864 (1302)
. . .. . . ....++++|+++.+
T Consensus 270 -------------~-----------------~----------~~------~------~--------~~~~l~~~~l~~~~ 289 (520)
T TIGR03269 270 -------------E-----------------C----------EV------E------V--------GEPIIKVRNVSKRY 289 (520)
T ss_pred -------------c-----------------c----------cc------C------C--------CCceEEEeccEEEe
Confidence 0 0 00 0 0 00125667776654
Q ss_pred eccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEc-Ccc---CCh-----
Q 000753 865 DMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKIS-GYP---KNQ----- 935 (1302)
Q Consensus 865 ~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~-g~~---~~~----- 935 (1302)
+.. ..+.+.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++ |.+ ...
T Consensus 290 ~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~~~~~~~~~~~ 359 (520)
T TIGR03269 290 ISV--------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEWVDMTKPGPDG 359 (520)
T ss_pred ccC--------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCccccccccchhh
Confidence 210 0112469999999999999999999999999999999999765 347999996 532 111
Q ss_pred -hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc-----cccccccCCCCCCCCH
Q 000753 936 -ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-----LNDSMVGLPGVSGLST 1009 (1302)
Q Consensus 936 -~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-----~~~~~~g~~~~~~LSg 1009 (1302)
...++.+||++|++.+++.+||.|++.+...+. ...+..++.+.++++.++|.+ ..++. +..|||
T Consensus 360 ~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~~LSg 430 (520)
T TIGR03269 360 RGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY-----PDELSE 430 (520)
T ss_pred HHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-----hhhCCH
Confidence 123456999999998899999999998754321 122333456889999999975 34554 457999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000753 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1302)
Q Consensus 1010 GqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~ 1088 (1302)
||||||+|||||+.+|+||||||||+|||+.++..+++.|++++++ |.|||++||+++ .+.+.||++++|.+ |+++.
T Consensus 431 Gq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~ 508 (520)
T TIGR03269 431 GERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMRD-GKIVK 508 (520)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999754 899999999986 57778999999985 78888
Q ss_pred ecCC
Q 000753 1089 AGPL 1092 (1302)
Q Consensus 1089 ~g~~ 1092 (1302)
.|++
T Consensus 509 ~g~~ 512 (520)
T TIGR03269 509 IGDP 512 (520)
T ss_pred ECCH
Confidence 8864
No 29
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.2e-63 Score=617.27 Aligned_cols=464 Identities=21% Similarity=0.282 Sum_probs=345.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCccceEEECCcccCCCCc-------cceEEEEccCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEFVP-------QRTCAYISQHD 254 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d 254 (1302)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|. ...+|+|.++|+++..... ++.++||+|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 46999999999999999999999999999999999999762 1138999999998754321 24799999997
Q ss_pred C--CCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc---
Q 000753 255 L--HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI--- 329 (1302)
Q Consensus 255 ~--~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--- 329 (1302)
. +++.+||+|++.+...... + . +. .+....++.+++.+||++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~-~-----------------~-~~--------------~~~~~~~~~~l~~~gl~~~~~ 148 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHR-G-----------------M-RR--------------EAARGEILNCLDRVGIRQAAK 148 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhc-C-----------------C-CH--------------HHHHHHHHHHHHHCCCCChHH
Confidence 4 6677899999876422110 0 0 00 001123567899999976
Q ss_pred cccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHh
Q 000753 330 CADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYD 409 (1302)
Q Consensus 330 ~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~ 409 (1302)
..|+.+++ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++..+.|+|++.|++ .++.+
T Consensus 149 ~~~~~~~~-----LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~-~~~~~ 222 (529)
T PRK15134 149 RLTDYPHQ-----LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNL-SIVRK 222 (529)
T ss_pred HHhhCCcc-----cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcH-HHHHH
Confidence 35777776 9999999999999999999999999999999999999999999999765578888877665 47778
Q ss_pred hcCeEEEecCCeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChh
Q 000753 410 LFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHM 489 (1302)
Q Consensus 410 ~~D~iilL~~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 489 (1302)
++|+|++|++|++++.|+++++... |.. .+ .
T Consensus 223 ~~dri~~l~~G~i~~~g~~~~~~~~--------~~~----~~-----------------------------~-------- 253 (529)
T PRK15134 223 LADRVAVMQNGRCVEQNRAATLFSA--------PTH----PY-----------------------------T-------- 253 (529)
T ss_pred hcCEEEEEECCEEEEeCCHHHHhhC--------CCC----HH-----------------------------H--------
Confidence 9999999999999999987654210 000 00 0
Q ss_pred cHhHHhhhcCCCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 000753 490 GQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGD 569 (1302)
Q Consensus 490 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~ 569 (1302)
+.+ +...
T Consensus 254 ----------------------------------------~~~----------------------------~~~~----- 260 (529)
T PRK15134 254 ----------------------------------------QKL----------------------------LNSE----- 260 (529)
T ss_pred ----------------------------------------HHH----------------------------HHhC-----
Confidence 000 0000
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCc
Q 000753 570 MNGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYD 649 (1302)
Q Consensus 570 ~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~ 649 (1302)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHH
Q 000753 650 PAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTS 729 (1302)
Q Consensus 650 ~~~~~f~~~~l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~a 729 (1302)
+
T Consensus 261 -------------------------------------------------------------~------------------ 261 (529)
T PRK15134 261 -------------------------------------------------------------P------------------ 261 (529)
T ss_pred -------------------------------------------------------------c------------------
Confidence 0
Q ss_pred HHHHHhhCCccccCCCCCCCcccchhHHHHhhcCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeec
Q 000753 730 LLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEE 809 (1302)
Q Consensus 730 l~~nef~~~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~ 809 (1302)
. ..+. .
T Consensus 262 ---------~---~~~~----~---------------------------------------------------------- 267 (529)
T PRK15134 262 ---------S---GDPV----P---------------------------------------------------------- 267 (529)
T ss_pred ---------c---cccc----c----------------------------------------------------------
Confidence 0 0000 0
Q ss_pred cchhhhccCcccchhhhhhccccccccccccccCCccccccCCcEEEEeccceeeecccc-ccccccccccceeecccce
Q 000753 810 DGEKQRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAE-MKTEGVGEDRLQLLHSVSG 888 (1302)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~-~~~~~~~~~~~~iL~~vs~ 888 (1302)
.. . . .+..++++|+++.++...+ .+ ...+.+.+|+||||
T Consensus 268 -------------------------~~-~---~--------~~~~l~~~~l~~~~~~~~~~~~---~~~~~~~il~~isl 307 (529)
T PRK15134 268 -------------------------LP-E---P--------ASPLLDVEQLQVAFPIRKGILK---RTVDHNVVVKNISF 307 (529)
T ss_pred -------------------------cC-C---C--------CCCcccccCcEEEeecCccccc---cccccceeeeccee
Confidence 00 0 0 0001345555554421000 00 00012469999999
Q ss_pred eecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh---h---hhcceeEEeccCC--CCCCCCCHHHH
Q 000753 889 VFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---E---TFARVSGYCEQND--IHSPYVTVYES 960 (1302)
Q Consensus 889 ~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~---~~~~~~gyv~Q~~--~~~~~lTv~E~ 960 (1302)
+|++||++||+||||||||||+++|+|..+ .+|+|.++|.++.. . .+++.+||++|++ .+++.+||.||
T Consensus 308 ~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~ 384 (529)
T PRK15134 308 TLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQI 384 (529)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHH
Confidence 999999999999999999999999999753 37999999986532 1 1345699999997 47788999999
Q ss_pred HHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCH
Q 000753 961 LLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1302)
Q Consensus 961 l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~ 1039 (1302)
+.+....+.. .....+.++.+.++++.++|. +..++. +..|||||||||+|||||+.+|++|||||||+|||+
T Consensus 385 l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~ 458 (529)
T PRK15134 385 IEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDK 458 (529)
T ss_pred HHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCH
Confidence 9886433211 122333456688999999996 456665 457999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1040 RAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1040 ~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
.++..+++.|++++++ |+|||++||+++ .+.+.||++++|++ |+++..|+.
T Consensus 459 ~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 459 TVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 9999999999999765 899999999986 56778999999985 789888874
No 30
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=8.4e-63 Score=608.73 Aligned_cols=459 Identities=22% Similarity=0.295 Sum_probs=343.5
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc----cceEEEEccCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1302)
+++|+|||+++++|++++|+|||||||||||++|+|.++|. ..+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 46999999999999999999999999999999999998761 128999999998765332 3569999999999999
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccc-cccccCc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICA-DTMVGDE 338 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-dt~vg~~ 338 (1302)
+||+||+.++......+..+ +.. +....++.+++.+||++.. ++.+++
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~----------------~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~~- 141 (500)
T TIGR02633 93 LSVAENIFLGNEITLPGGRM----------------AYN--------------AMYLRAKNLLRELQLDADNVTRPVGD- 141 (500)
T ss_pred CcHHHHHHhhcccccccccc----------------CHH--------------HHHHHHHHHHHHcCCCCCcccCchhh-
Confidence 99999998864321000000 000 0012346689999998764 566776
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEec
Q 000753 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1302)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~ 418 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.++||+|++|+
T Consensus 142 ----LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiitHd~-~~~~~~~d~i~~l~ 215 (500)
T TIGR02633 142 ----YGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-HGVACVYISHKL-NEVKAVCDTICVIR 215 (500)
T ss_pred ----CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeCcH-HHHHHhCCEEEEEe
Confidence 999999999999999999999999999999999999999999999976 477877776654 57888999999999
Q ss_pred CCeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHHhhhc
Q 000753 419 EGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLR 498 (1302)
Q Consensus 419 ~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~ 498 (1302)
+|++++.|+.+++.. .+ .
T Consensus 216 ~G~i~~~~~~~~~~~---------------~~-----------------------------~------------------ 233 (500)
T TIGR02633 216 DGQHVATKDMSTMSE---------------DD-----------------------------I------------------ 233 (500)
T ss_pred CCeEeeecCcccCCH---------------HH-----------------------------H------------------
Confidence 999987654321100 00 0
Q ss_pred CCCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcchhHH
Q 000753 499 VPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFG 578 (1302)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g 578 (1302)
..+ +.
T Consensus 234 -----------------------------~~~-----------------------------~~----------------- 238 (500)
T TIGR02633 234 -----------------------------ITM-----------------------------MV----------------- 238 (500)
T ss_pred -----------------------------HHH-----------------------------Hh-----------------
Confidence 000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchHHHHHHH
Q 000753 579 ALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQ 658 (1302)
Q Consensus 579 ~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 658 (1302)
+.
T Consensus 239 --------------------------------------------------------------------~~---------- 240 (500)
T TIGR02633 239 --------------------------------------------------------------------GR---------- 240 (500)
T ss_pred --------------------------------------------------------------------Cc----------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHHHHhhCC
Q 000753 659 FLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGG 738 (1302)
Q Consensus 659 ~l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~nef~~~ 738 (1302)
+ .+
T Consensus 241 -----------------------------------------------~---~~--------------------------- 243 (500)
T TIGR02633 241 -----------------------------------------------E---IT--------------------------- 243 (500)
T ss_pred -----------------------------------------------c---cc---------------------------
Confidence 0 00
Q ss_pred ccccCCCCCCCcccchhHHHHhhcCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeeccchhhhccC
Q 000753 739 RWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASG 818 (1302)
Q Consensus 739 ~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (1302)
. . . +
T Consensus 244 -------~----~--------------------------------------------~-~-------------------- 247 (500)
T TIGR02633 244 -------S----L--------------------------------------------Y-P-------------------- 247 (500)
T ss_pred -------c----c--------------------------------------------c-c--------------------
Confidence 0 0 0 0
Q ss_pred cccchhhhhhccccccccccccccCCccccccCCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEE
Q 000753 819 HEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTAL 898 (1302)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al 898 (1302)
. . . . +. .+..++++|+++.+.. .+++.+|+|+||+|++||++||
T Consensus 248 -------~-~--~--~-------~~-------~~~~l~~~~l~~~~~~----------~~~~~~l~~is~~i~~Ge~~~l 291 (500)
T TIGR02633 248 -------H-E--P--H-------EI-------GDVILEARNLTCWDVI----------NPHRKRVDDVSFSLRRGEILGV 291 (500)
T ss_pred -------c-c--c--c-------CC-------CCceEEEeCCcccccc----------cccccccccceeEEeCCcEEEE
Confidence 0 0 0 0 00 0013566676643210 0123599999999999999999
Q ss_pred ecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh----hhhcceeEEeccCC---CCCCCCCHHHHHHHHHH--hhC
Q 000753 899 MGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQND---IHSPYVTVYESLLYSAW--LRL 969 (1302)
Q Consensus 899 ~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l~~~~~--lr~ 969 (1302)
+||||||||||+++|+|..++ +.+|+|.++|.+... ...++.+||++|+. .+++.+||+||+.+... ...
T Consensus 292 ~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~ 370 (500)
T TIGR02633 292 AGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCF 370 (500)
T ss_pred eCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhcc
Confidence 999999999999999997642 137999999987532 23456799999995 57889999999987532 111
Q ss_pred CCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHH
Q 000753 970 SSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRT 1048 (1302)
Q Consensus 970 ~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~ 1048 (1302)
..........+.++++++.+++.+ ..++.+ ..||||||||++|||+|+.+|++|||||||+|||+.++..+++.
T Consensus 371 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 445 (500)
T TIGR02633 371 KMRIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKL 445 (500)
T ss_pred CCcCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHH
Confidence 001122333456889999999964 456653 47999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1049 VRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1049 l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
|++++++|.|||++||+++ ++.+.||++++|.+ |+++..++.
T Consensus 446 l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~ 487 (500)
T TIGR02633 446 INQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVN 487 (500)
T ss_pred HHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcc
Confidence 9999888999999999986 57788999999985 788877654
No 31
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-63 Score=608.25 Aligned_cols=451 Identities=22% Similarity=0.302 Sum_probs=343.0
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC----ccceEEEEccCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV----PQRTCAYISQHDLHHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 259 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++||+|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 35999999999999999999999999999999999999887 999999998875322 24579999999999999
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
+||+||+.++......+ ..+.. +....++.+++.+||++..++.+++
T Consensus 94 ~tv~~~l~~~~~~~~~~-----------------~~~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (501)
T PRK11288 94 MTVAENLYLGQLPHKGG-----------------IVNRR--------------LLNYEAREQLEHLGVDIDPDTPLKY-- 140 (501)
T ss_pred CCHHHHHHhcccccccC-----------------CCCHH--------------HHHHHHHHHHHHcCCCCCcCCchhh--
Confidence 99999998853210000 00000 0112345688999998877888876
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|+|++|++
T Consensus 141 ---LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiiiitHd~-~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 141 ---LSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA-EGRVILYVSHRM-EEIFALCDAITVFKD 215 (501)
T ss_pred ---CCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeCCH-HHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999876 377888777665 477889999999999
Q ss_pred CeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHHhhhcC
Q 000753 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1302)
Q Consensus 420 G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 499 (1302)
|+++..++..+. . + . ++..+.
T Consensus 216 G~i~~~~~~~~~-----------------------~-~---~----------------~~~~~~---------------- 236 (501)
T PRK11288 216 GRYVATFDDMAQ-----------------------V-D---R----------------DQLVQA---------------- 236 (501)
T ss_pred CEEEeecCcccc-----------------------C-C---H----------------HHHHHH----------------
Confidence 999864421000 0 0 0 000000
Q ss_pred CCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcchhHHH
Q 000753 500 PYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGA 579 (1302)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~ 579 (1302)
+.... .
T Consensus 237 ------------------------------------------------------------~~~~~-----~--------- 242 (501)
T PRK11288 237 ------------------------------------------------------------MVGRE-----I--------- 242 (501)
T ss_pred ------------------------------------------------------------hcCCC-----c---------
Confidence 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchHHHHHHHH
Q 000753 580 LFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQF 659 (1302)
Q Consensus 580 lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 659 (1302)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHHHHhhCCc
Q 000753 660 LAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGR 739 (1302)
Q Consensus 660 l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~nef~~~~ 739 (1302)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCcccchhHHHHhhcCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeeccchhhhccCc
Q 000753 740 WDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGH 819 (1302)
Q Consensus 740 ~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1302)
.. . ..
T Consensus 243 ------~~---~--------------------------------------------~~---------------------- 247 (501)
T PRK11288 243 ------GD---I--------------------------------------------YG---------------------- 247 (501)
T ss_pred ------cc---c--------------------------------------------cc----------------------
Confidence 00 0 00
Q ss_pred ccchhhhhhccccccccccccccCCccccccCCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEe
Q 000753 820 EAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALM 899 (1302)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 899 (1302)
. .+ . +..+..++++|+++ ..+++|+|++|++||++||+
T Consensus 248 ------~-~~----~--------------~~~~~~l~~~~~~~-----------------~~~l~~isl~i~~Ge~~~ii 285 (501)
T PRK11288 248 ------Y-RP----R--------------PLGEVRLRLDGLKG-----------------PGLREPISFSVRAGEIVGLF 285 (501)
T ss_pred ------c-cc----c--------------CCCCcEEEEecccc-----------------CCcccceeEEEeCCcEEEEE
Confidence 0 00 0 00011345666542 13899999999999999999
Q ss_pred cCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh----hhhcceeEEeccCC---CCCCCCCHHHHHHHHHHhhCCC-
Q 000753 900 GVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQND---IHSPYVTVYESLLYSAWLRLSS- 971 (1302)
Q Consensus 900 G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l~~~~~lr~~~- 971 (1302)
||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++ .+++.+|+.|++.+........
T Consensus 286 G~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~ 363 (501)
T PRK11288 286 GLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRA 363 (501)
T ss_pred cCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhccc
Confidence 9999999999999999765 347999999986532 22346799999986 4788999999998753211100
Q ss_pred C--CcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHH
Q 000753 972 D--VDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRT 1048 (1302)
Q Consensus 972 ~--~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~ 1048 (1302)
. ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.++..++++
T Consensus 364 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 438 (501)
T PRK11288 364 GCLINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNV 438 (501)
T ss_pred ccccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHH
Confidence 0 01222345678999999994 5667764 47999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCc
Q 000753 1049 VRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1302)
Q Consensus 1049 l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~ 1094 (1302)
|++++++|.|||++|||++ ++.+.||++++|.+ |++++.|+.++
T Consensus 439 l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~ 482 (501)
T PRK11288 439 IYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQ 482 (501)
T ss_pred HHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEcccc
Confidence 9999888999999999986 57788999999985 78999887754
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-62 Score=598.04 Aligned_cols=449 Identities=20% Similarity=0.285 Sum_probs=340.9
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC----ccceEEEEccCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV----PQRTCAYISQHDLHHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 259 (1302)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 46999999999999999999999999999999999999887 999999999875432 13579999999988999
Q ss_pred CCHHHHHHhhhhc-cCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCc
Q 000753 260 MTVRETLDFSGRC-LGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1302)
Q Consensus 260 lTVrE~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 338 (1302)
+||+||+.++... .+.. .+.+ +....++.+++.+||++..++.+++
T Consensus 88 ~tv~~~l~~~~~~~~~~~-------------------~~~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~- 134 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMF-------------------VDQD-------------KMYRDTKAIFDELDIDIDPRAKVAT- 134 (491)
T ss_pred CCHHHHhhcccccccccc-------------------cCHH-------------HHHHHHHHHHHHcCCCCCccCchhh-
Confidence 9999999875321 0000 0000 0011346688999999888888876
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEec
Q 000753 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1302)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~ 418 (1302)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++.|++ .++.++||+|++|+
T Consensus 135 ----LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tvii~tH~~-~~~~~~~d~i~~l~ 208 (491)
T PRK10982 135 ----LSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-RGCGIVYISHKM-EEIFQLCDEITILR 208 (491)
T ss_pred ----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCH-HHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999875 477887776654 57888999999999
Q ss_pred CCeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHHhhhc
Q 000753 419 EGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLR 498 (1302)
Q Consensus 419 ~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~ 498 (1302)
+|+++..|+.+++.. .+ ..+.
T Consensus 209 ~G~i~~~~~~~~~~~---------------~~-----------------------------~~~~--------------- 229 (491)
T PRK10982 209 DGQWIATQPLAGLTM---------------DK-----------------------------IIAM--------------- 229 (491)
T ss_pred CCEEEeecChhhCCH---------------HH-----------------------------HHHH---------------
Confidence 999998876543100 00 0000
Q ss_pred CCCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcchhHH
Q 000753 499 VPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFG 578 (1302)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g 578 (1302)
+....
T Consensus 230 -------------------------------------------------------------~~~~~-------------- 234 (491)
T PRK10982 230 -------------------------------------------------------------MVGRS-------------- 234 (491)
T ss_pred -------------------------------------------------------------HhCCC--------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchHHHHHHH
Q 000753 579 ALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQ 658 (1302)
Q Consensus 579 ~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 658 (1302)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHHHHhhCC
Q 000753 659 FLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGG 738 (1302)
Q Consensus 659 ~l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~nef~~~ 738 (1302)
.. .
T Consensus 235 ---------------------------------------------------~~--------------------------~ 237 (491)
T PRK10982 235 ---------------------------------------------------LT--------------------------Q 237 (491)
T ss_pred ---------------------------------------------------cc--------------------------c
Confidence 00 0
Q ss_pred ccccCCCCCCCcccchhHHHHhhcCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeeccchhhhccC
Q 000753 739 RWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASG 818 (1302)
Q Consensus 739 ~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (1302)
.. +.
T Consensus 238 ~~----~~------------------------------------------------------------------------ 241 (491)
T PRK10982 238 RF----PD------------------------------------------------------------------------ 241 (491)
T ss_pred cc----cc------------------------------------------------------------------------
Confidence 00 00
Q ss_pred cccchhhhhhccccccccccccccCCccccccCCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEE
Q 000753 819 HEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTAL 898 (1302)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al 898 (1302)
. .. . + .+..+.++|+++.. +.+|+|||+++++||++||
T Consensus 242 ------------~---~~-----~------~-~~~~i~~~~l~~~~---------------~~~l~~vsl~i~~Ge~~~l 279 (491)
T PRK10982 242 ------------K---EN-----K------P-GEVILEVRNLTSLR---------------QPSIRDVSFDLHKGEILGI 279 (491)
T ss_pred ------------c---cC-----C------C-CCcEEEEeCccccc---------------CcccceeeEEEeCCcEEEE
Confidence 0 00 0 0 01135677776531 2489999999999999999
Q ss_pred ecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh----hhhcceeEEeccCC---CCCCCCCHHHHHHHHHH--hhC
Q 000753 899 MGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQND---IHSPYVTVYESLLYSAW--LRL 969 (1302)
Q Consensus 899 ~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l~~~~~--lr~ 969 (1302)
+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++ .+++.+|+.+|..+... ...
T Consensus 280 ~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (491)
T PRK10982 280 AGLVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKN 357 (491)
T ss_pred ecCCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcc
Confidence 99999999999999999765 347999999977532 12345689999985 36788888877433211 100
Q ss_pred CCC-CcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHH
Q 000753 970 SSD-VDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMR 1047 (1302)
Q Consensus 970 ~~~-~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~ 1047 (1302)
... .......+.+.++++.+++. +..++. +..|||||||||+||++|+.+|+||||||||+|||+.++..+++
T Consensus 358 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~ 432 (491)
T PRK10982 358 KVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQ 432 (491)
T ss_pred cccccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHH
Confidence 001 11223345678899999995 455665 45799999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1048 TVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1048 ~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
.|+++.++|+|||++||+++ ++...||++++|.+ |+++..++.
T Consensus 433 ~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~ 475 (491)
T PRK10982 433 LIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDT 475 (491)
T ss_pred HHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEcc
Confidence 99999888999999999986 57788999999985 788876654
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.4e-60 Score=587.59 Aligned_cols=447 Identities=19% Similarity=0.277 Sum_probs=328.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCCC--C-
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLH--H- 257 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~--~- 257 (1302)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.. +
T Consensus 16 ~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 92 (490)
T PRK10938 16 TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLS 92 (490)
T ss_pred eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhcc
Confidence 35999999999999999999999999999999999999887 999999997664322 13458999998642 1
Q ss_pred -----CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccccc
Q 000753 258 -----GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICAD 332 (1302)
Q Consensus 258 -----~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 332 (1302)
..+||+|++.+.. +....++.+++.+||++..|
T Consensus 93 ~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~~~l~~~~~ 130 (490)
T PRK10938 93 PGEDDTGRTTAEIIQDEV------------------------------------------KDPARCEQLAQQFGITALLD 130 (490)
T ss_pred cchhhccccHHHhcccch------------------------------------------hHHHHHHHHHHHcCCHhhhh
Confidence 1467777764310 00112456789999998889
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
+.+++ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +.|+|++.|++ .++.++||
T Consensus 131 ~~~~~-----LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-g~tvii~tH~~-~~~~~~~d 203 (490)
T PRK10938 131 RRFKY-----LSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQS-GITLVLVLNRF-DEIPDFVQ 203 (490)
T ss_pred CCccc-----CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhc-CCeEEEEeCCH-HHHHhhCC
Confidence 98887 9999999999999999999999999999999999999999999999764 77888877665 57889999
Q ss_pred eEEEecCCeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHh
Q 000753 413 DIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQ 492 (1302)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 492 (1302)
+|++|++|+++.+|+++++.+. +.+....
T Consensus 204 ~v~~l~~G~i~~~~~~~~~~~~---------------~~~~~~~------------------------------------ 232 (490)
T PRK10938 204 FAGVLADCTLAETGEREEILQQ---------------ALVAQLA------------------------------------ 232 (490)
T ss_pred EEEEEECCEEEEeCCHHHHhcc---------------hhhhhhh------------------------------------
Confidence 9999999999999887654210 0000000
Q ss_pred HHhhhcCCCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q 000753 493 IASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNG 572 (1302)
Q Consensus 493 ~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~ 572 (1302)
.. + ....
T Consensus 233 ------------------------------------~~------~-------------------------------~~~~ 239 (490)
T PRK10938 233 ------------------------------------HS------E-------------------------------QLEG 239 (490)
T ss_pred ------------------------------------hh------h-------------------------------ccCc
Confidence 00 0 0000
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchH
Q 000753 573 GSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAA 652 (1302)
Q Consensus 573 ~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~ 652 (1302)
T Consensus 240 -------------------------------------------------------------------------------- 239 (490)
T PRK10938 240 -------------------------------------------------------------------------------- 239 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHH
Q 000753 653 SRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLV 732 (1302)
Q Consensus 653 ~~f~~~~l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~ 732 (1302)
T Consensus 240 -------------------------------------------------------------------------------- 239 (490)
T PRK10938 240 -------------------------------------------------------------------------------- 239 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhCCccccCCCCCCCcccchhHHHHhhcCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeeccch
Q 000753 733 NEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGE 812 (1302)
Q Consensus 733 nef~~~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~ 812 (1302)
.. .+.. ..
T Consensus 240 -------~~--~~~~--~~------------------------------------------------------------- 247 (490)
T PRK10938 240 -------VQ--LPEP--DE------------------------------------------------------------- 247 (490)
T ss_pred -------cc--cCcc--cc-------------------------------------------------------------
Confidence 00 0000 00
Q ss_pred hhhccCcccchhhhhhccccccccccccccCCccccccCCcEEEEeccceeeeccccccccccccccceeecccceeecC
Q 000753 813 KQRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRP 892 (1302)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~ 892 (1302)
...+ . .. . .....++++|+++.++ ++.+|+|+||+|++
T Consensus 248 -------------~~~~-~-----~~---~-------~~~~~l~~~~l~~~~~-------------~~~il~~vsl~i~~ 285 (490)
T PRK10938 248 -------------PSAR-H-----AL---P-------ANEPRIVLNNGVVSYN-------------DRPILHNLSWQVNP 285 (490)
T ss_pred -------------cccc-c-----cc---C-------CCCceEEEeceEEEEC-------------CeeEEeeceEEEcC
Confidence 0000 0 00 0 0011367788776542 24599999999999
Q ss_pred CeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh----hhhcceeEEeccCCCCCC--CCCHHHHHHHHHH
Q 000753 893 GVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQNDIHSP--YVTVYESLLYSAW 966 (1302)
Q Consensus 893 Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~--~lTv~E~l~~~~~ 966 (1302)
||++||+||||||||||+++|+|.... ..+|+|.++|.+... ...++.+||++|++.+++ ..|+++++.+...
T Consensus 286 Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~ 364 (490)
T PRK10938 286 GEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFF 364 (490)
T ss_pred CCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccc
Confidence 999999999999999999999996431 137999999976421 123567999999876543 3567766654321
Q ss_pred h--hCCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHH
Q 000753 967 L--RLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1043 (1302)
Q Consensus 967 l--r~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~ 1043 (1302)
- ....... ....+.++++++.++|.+ ..++. +..|||||||||+||+||+.+|++|||||||+|||+.++.
T Consensus 365 ~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~ 438 (490)
T PRK10938 365 DSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAP-----FHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQ 438 (490)
T ss_pred cccccccCCC-HHHHHHHHHHHHHcCCchhhccCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHH
Confidence 0 0111111 223456889999999986 66766 3479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCC-CEEEEEecCccHHHHH-hcCeEEEEecCcEEEEe
Q 000753 1044 IVMRTVRNTVDTG-RTVVCTIHQPSIDIFE-AFDELLLLKRGGRVIYA 1089 (1302)
Q Consensus 1044 ~i~~~l~~~~~~g-~tvi~t~H~~~~~~~~-~~D~i~~l~~gG~~~~~ 1089 (1302)
.+++.|++++++| .|||++||+++ ++.+ .+|++++|++ |++++.
T Consensus 439 ~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~ 484 (490)
T PRK10938 439 LVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRY 484 (490)
T ss_pred HHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEe
Confidence 9999999998766 47999999976 4555 4799999986 666543
No 34
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2e-57 Score=565.82 Aligned_cols=201 Identities=23% Similarity=0.317 Sum_probs=162.3
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++ ++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.+++ +
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECC-c-
Confidence 478888876542 3469999999999999999999999999999999999765 3479999853 1
Q ss_pred ChhhhcceeEEeccCC-CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000753 934 NQETFARVSGYCEQND-IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQ 1011 (1302)
Q Consensus 934 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGq 1011 (1302)
..+||++|++ .+++.+||.|++.+...... .... ...+.++++.+++.+ ..++. +..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKK-----VGVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999996 67889999999987642221 1111 123457899999964 45555 35799999
Q ss_pred HHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEE-Eec
Q 000753 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI-YAG 1090 (1302)
Q Consensus 1012 rqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~-~~g 1090 (1302)
|||++||++|+.+|++|||||||+|||+.++..+++.|+++. | |||++||+++ .+...||++++|+++|++. +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 4 8999999986 5777899999998767765 455
Q ss_pred C
Q 000753 1091 P 1091 (1302)
Q Consensus 1091 ~ 1091 (1302)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 35
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=8.2e-58 Score=504.67 Aligned_cols=470 Identities=23% Similarity=0.333 Sum_probs=357.1
Q ss_pred ccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCC--CCCccceEEECCcccCCCCcc-------ceEEEEcc
Q 000753 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGK--DLRASGKITYCGHELNEFVPQ-------RTCAYISQ 252 (1302)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~--~~~~~G~I~~~G~~~~~~~~~-------~~~~yv~Q 252 (1302)
....++++|||.+++||.+||+|.||||||-..+.+.|+++. ....+|+|.|+|.++-....+ ..|++++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 456799999999999999999999999999999999999876 345689999999987544321 47999999
Q ss_pred CC--CCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccc
Q 000753 253 HD--LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDIC 330 (1302)
Q Consensus 253 ~d--~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 330 (1302)
+| .+.|-.|+..-|.-..+++.. ++ ...++.++-++|+..|+++-
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg---------~~------------------------~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRG---------LS------------------------RAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhc---------cc------------------------HHHHHHHHHHHHHHcCCCch
Confidence 98 566777887777654443211 11 11123345668899999875
Q ss_pred ccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhh
Q 000753 331 ADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDL 410 (1302)
Q Consensus 331 ~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~ 410 (1302)
...+ +.....|||||||||.||.||+.+|++|+-||||++||...+.+|.++|+++..++|..++... |...-+-++
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfIT-HDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFIT-HDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEe-ccHHHHHHh
Confidence 4332 2344569999999999999999999999999999999999999999999999998887776655 556678889
Q ss_pred cCeEEEecCCeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhc
Q 000753 411 FDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMG 490 (1302)
Q Consensus 411 ~D~iilL~~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 490 (1302)
+|+|+||.+|+++++|+.+.+.. .|.+ ||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hHH-----------------
Confidence 99999999999999999876532 1111 000
Q ss_pred HhHHhhhcCCCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 000753 491 QQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDM 570 (1302)
Q Consensus 491 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~ 570 (1302)
+.+.+. .|
T Consensus 255 r~Ll~a--eP---------------------------------------------------------------------- 262 (534)
T COG4172 255 RKLLAA--EP---------------------------------------------------------------------- 262 (534)
T ss_pred HHHHhc--CC----------------------------------------------------------------------
Confidence 000000 00
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcc
Q 000753 571 NGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDP 650 (1302)
Q Consensus 571 ~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~ 650 (1302)
T Consensus 263 -------------------------------------------------------------------------------- 262 (534)
T COG4172 263 -------------------------------------------------------------------------------- 262 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHH
Q 000753 651 AASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSL 730 (1302)
Q Consensus 651 ~~~~f~~~~l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al 730 (1302)
T Consensus 263 -------------------------------------------------------------------------------- 262 (534)
T COG4172 263 -------------------------------------------------------------------------------- 262 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhCCccccCCCCCCCcccchhHHHHhhcCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeecc
Q 000753 731 LVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEED 810 (1302)
Q Consensus 731 ~~nef~~~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~ 810 (1302)
.+.
T Consensus 263 --------------~g~--------------------------------------------------------------- 265 (534)
T COG4172 263 --------------SGD--------------------------------------------------------------- 265 (534)
T ss_pred --------------CCC---------------------------------------------------------------
Confidence 000
Q ss_pred chhhhccCcccchhhhhhccccccccccccccCCccccccCCcEEEEeccceeeeccccccccccccccceeecccceee
Q 000753 811 GEKQRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVF 890 (1302)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i 890 (1302)
..+ ..+..+..++.+|++..++.+..+-. -..+...++++||++.
T Consensus 266 ----------------~~p-----------------~~~~~~~ll~~~~v~v~f~i~~g~~~--r~~~~~~AVd~isl~L 310 (534)
T COG4172 266 ----------------PPP-----------------LPEDAPVLLEVEDLRVWFPIKGGFLR--RTVDHLRAVDGISLTL 310 (534)
T ss_pred ----------------CCC-----------------CCCCCCceEEecceEEEEecCCcccc--ccchheEEeccceeEe
Confidence 000 00001112333333322222211100 0123457999999999
Q ss_pred cCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh------hhhcceeEEeccCCC--CCCCCCHHHHHH
Q 000753 891 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDI--HSPYVTVYESLL 962 (1302)
Q Consensus 891 ~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~--~~~~lTv~E~l~ 962 (1302)
++||-+||+|.||||||||=.+|.+...+ +|.|.++|.++.. ..+|+.+-.|+|||. +.|.+||.+-+.
T Consensus 311 ~~gqTlGlVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~ 387 (534)
T COG4172 311 RRGQTLGLVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIE 387 (534)
T ss_pred cCCCeEEEEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhh
Confidence 99999999999999999999999997653 5999999998753 346778999999985 789999999988
Q ss_pred HHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHH
Q 000753 963 YSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1041 (1302)
Q Consensus 963 ~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~ 1041 (1302)
-+.....+ ..+..++++++.++|+.+||.+- .+++ +.++|||||||++|||||+-+|++++||||||.||-.-
T Consensus 388 EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SV 461 (534)
T COG4172 388 EGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSV 461 (534)
T ss_pred hhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHH
Confidence 77666543 45678899999999999999753 4454 56899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1042 AAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1042 ~~~i~~~l~~~~-~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
+.+|.++|+++. +.|.+-++++||+. -+...||++++|++ |+|++.||.
T Consensus 462 QaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 462 QAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred HHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 999999999996 45899999999986 46678999999985 899999985
No 36
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=8.8e-58 Score=569.05 Aligned_cols=201 Identities=21% Similarity=0.293 Sum_probs=161.9
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.++ ++.+|+|||++|++|+++||+||||||||||+++|+|... +.+|+|.+++.
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~~-- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGET-- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECCc--
Confidence 467888876542 3469999999999999999999999999999999999765 34799988541
Q ss_pred ChhhhcceeEEeccCC-CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000753 934 NQETFARVSGYCEQND-IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQ 1011 (1302)
Q Consensus 934 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGq 1011 (1302)
..+||++|++ .+++.+||.|++.+...... .... ...+.++++.+++.+ ..++. +..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKK-----VGQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1589999986 47788999999987642211 1111 123557899999964 45655 34799999
Q ss_pred HHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEE-Eec
Q 000753 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI-YAG 1090 (1302)
Q Consensus 1012 rqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~-~~g 1090 (1302)
||||+||++|+.+|++|||||||+|||+.+...+++.|+++. .|||++||+++ .+...||++++|++||++. +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999873 48999999986 5667899999998766765 555
Q ss_pred C
Q 000753 1091 P 1091 (1302)
Q Consensus 1091 ~ 1091 (1302)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 37
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-57 Score=564.58 Aligned_cols=198 Identities=19% Similarity=0.283 Sum_probs=162.5
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 478888876542 2469999999999999999999999999999999999765 34799999873
Q ss_pred ChhhhcceeEEeccCCC--CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 000753 934 NQETFARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTE 1010 (1302)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~--~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgG 1010 (1302)
+.+||++|++. +.+.+|++|++.+.. .. . ..++.++++++.+++. +..+.. +..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-G----DDEQAVRGTLGRLLFSQDDIKKS-----VKVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-C----ccHHHHHHHHHHcCCChhHhcCc-----ccccCHH
Confidence 45899999864 556799999986421 11 1 1124578899999994 556665 4579999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEE-Ee
Q 000753 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI-YA 1089 (1302)
Q Consensus 1011 qrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~-~~ 1089 (1302)
||||++||++|+.+|+||||||||+|||+.+...+++.|+++ +.|||++||+++ .+...||++++|++ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999886 459999999986 56778999999986 5665 77
Q ss_pred cCC
Q 000753 1090 GPL 1092 (1302)
Q Consensus 1090 g~~ 1092 (1302)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 38
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=5.9e-56 Score=550.04 Aligned_cols=211 Identities=21% Similarity=0.248 Sum_probs=169.6
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.++ + ..|+++|++|++||++||+||||||||||+++|+|... +.+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----
Confidence 367777765431 2 24899999999999999999999999999999999765 347888875
Q ss_pred ChhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000753 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1302)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1302)
..+||++|+..+.+.+||+|++.+..... . . ...++++++.++|.+..++.+ ..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~~---~--~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDDL---G--S---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhhc---C--h---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHH
Confidence 14899999988888999999998742111 1 1 124688999999988777764 579999999
Q ss_pred HHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1014 Rl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
||+||++|+.+|+||||||||+|||+.++..+.+.|++++++ |+|||++|||+. .+...+|++++|+ |++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~--~~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE--GEPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc--Ccceeeeec
Confidence 999999999999999999999999999999999999999764 899999999976 4667899999996 366666654
Q ss_pred Ccc---hhhHHHHHHhC
Q 000753 1093 GHE---SHKLIEYFEAV 1106 (1302)
Q Consensus 1093 ~~~---~~~~~~~f~~~ 1106 (1302)
... .+.+..|++.+
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 322 23344556655
No 39
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-54 Score=541.94 Aligned_cols=197 Identities=22% Similarity=0.335 Sum_probs=158.7
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++ ++.+|+|+|++|++|+++||+|||||||||||++|+|... +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 467888876542 3569999999999999999999999999999999999765 34789988641
Q ss_pred ChhhhcceeEEeccCC--CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHH
Q 000753 934 NQETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTE 1010 (1302)
Q Consensus 934 ~~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgG 1010 (1302)
..+||++|+. .+.+..|+.+++.. . .. ......+.++++.+++.. ..++.+ ..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 34456677776531 1 11 112345788999999963 556653 479999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEE-Ee
Q 000753 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI-YA 1089 (1302)
Q Consensus 1011 qrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~-~~ 1089 (1302)
|||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ . .|||++|||+. .+...||++++|.+ |+++ +.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--E-GALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 3 49999999986 46778999999985 6776 78
Q ss_pred cCC
Q 000753 1090 GPL 1092 (1302)
Q Consensus 1090 g~~ 1092 (1302)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 40
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=5.1e-54 Score=542.24 Aligned_cols=202 Identities=24% Similarity=0.320 Sum_probs=161.3
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.+ +++.+|+|||++|++|+++||+|||||||||||++|+|... +.+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQI-------------DGKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEE-------------CCeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc
Confidence 46788887654 23469999999999999999999999999999999999765 34789988 4321
Q ss_pred ChhhhcceeEEeccCC-CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHH
Q 000753 934 NQETFARVSGYCEQND-IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQ 1011 (1302)
Q Consensus 934 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGq 1011 (1302)
.+||++|+. .+++.+||.|++.+.... . ... .....+.++++.+++. +..++. ++.|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~-~--~~~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQE-V--MVN--GRPRHVLGYLQDFLFHPKRAMTP-----VKALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhccc-c--ccc--chHHHHHHHHHhcCCCHHHHhCh-----hhhCCHHH
Confidence 489999975 578899999999875321 0 111 1123477889999885 345555 34799999
Q ss_pred HHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe-cCcEEEEec
Q 000753 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-RGGRVIYAG 1090 (1302)
Q Consensus 1012 rqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~-~gG~~~~~g 1090 (1302)
||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||++|||.. .+...||+++++. +|....|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 459999999975 4667899999997 544455666
Q ss_pred CC
Q 000753 1091 PL 1092 (1302)
Q Consensus 1091 ~~ 1092 (1302)
+.
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 53
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.5e-54 Score=502.82 Aligned_cols=452 Identities=24% Similarity=0.359 Sum_probs=350.1
Q ss_pred cccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCcc----ceEEEEccCCCC
Q 000753 181 KRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ----RTCAYISQHDLH 256 (1302)
Q Consensus 181 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~ 256 (1302)
-...++|+|||+.++|||+++|+|.||||||||+|+|+|.++|+ +|+|.++|++.....++ .-|+.|.|+..+
T Consensus 18 FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L 94 (500)
T COG1129 18 FGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSL 94 (500)
T ss_pred cCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhc
Confidence 35678999999999999999999999999999999999999998 99999999988655543 569999999999
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccccccccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 336 (1302)
.|+|||.|||.++...... .++.. ..........+|+.+|+....++.|+
T Consensus 95 ~p~LsVaeNifLgre~~~~----------------~g~id--------------~~~m~~~A~~~l~~lg~~~~~~~~v~ 144 (500)
T COG1129 95 VPNLSVAENIFLGREPTRR----------------FGLID--------------RKAMRRRARELLARLGLDIDPDTLVG 144 (500)
T ss_pred cCCccHHHHhhcccccccC----------------CCccC--------------HHHHHHHHHHHHHHcCCCCChhhhhh
Confidence 9999999999876443211 00000 00112345678999999766899999
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEE
Q 000753 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1302)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iil 416 (1302)
+ ||+||||-|.||+|+..+++|++||||||+|+...+..+.+.++++.. .|.++|.. .|...|++++||+|.|
T Consensus 145 ~-----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~-~Gv~ii~I-SHrl~Ei~~i~DritV 217 (500)
T COG1129 145 D-----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA-QGVAIIYI-SHRLDEVFEIADRITV 217 (500)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCCEEEEE-cCcHHHHHHhcCEEEE
Confidence 8 999999999999999999999999999999999999999999999986 36665555 5678899999999999
Q ss_pred ecCCeEEEEcCh-hHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHHh
Q 000753 417 LSEGQIVYQGPR-DNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIAS 495 (1302)
Q Consensus 417 L~~G~iv~~G~~-~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 495 (1302)
|.+|+.+..++. .+.-. ++..
T Consensus 218 lRDG~~v~~~~~~~~~~~--------------------------------------------~~lv-------------- 239 (500)
T COG1129 218 LRDGRVVGTRPTAAETSE--------------------------------------------DELV-------------- 239 (500)
T ss_pred EeCCEEeeecccccCCCH--------------------------------------------HHHH--------------
Confidence 999999876652 21100 0000
Q ss_pred hhcCCCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcch
Q 000753 496 DLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSR 575 (1302)
Q Consensus 496 ~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~ 575 (1302)
T Consensus 240 -------------------------------------------------------------------------------- 239 (500)
T COG1129 240 -------------------------------------------------------------------------------- 239 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchHHHH
Q 000753 576 YFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRF 655 (1302)
Q Consensus 576 ~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f 655 (1302)
-.|+|=
T Consensus 240 -------------------------------------------------------------------~~MvGr------- 245 (500)
T COG1129 240 -------------------------------------------------------------------RLMVGR------- 245 (500)
T ss_pred -------------------------------------------------------------------HHhhCc-------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHHHHh
Q 000753 656 FKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEF 735 (1302)
Q Consensus 656 ~~~~l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~nef 735 (1302)
+.
T Consensus 246 ------------------------------------------------------------------------------~~ 247 (500)
T COG1129 246 ------------------------------------------------------------------------------EL 247 (500)
T ss_pred ------------------------------------------------------------------------------ch
Confidence 00
Q ss_pred hCCccccCCCCCCCcccchhHHHHhhcCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeeccchhhh
Q 000753 736 LGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQR 815 (1302)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~ 815 (1302)
. ..|..
T Consensus 248 ~-~~~~~------------------------------------------------------------------------- 253 (500)
T COG1129 248 E-DLFPE------------------------------------------------------------------------- 253 (500)
T ss_pred h-hhccc-------------------------------------------------------------------------
Confidence 0 00000
Q ss_pred ccCcccchhhhhhccccccccccccccCCccccccCCcEEEEeccceeeeccccccccccccccceeecccceeecCCeE
Q 000753 816 ASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVL 895 (1302)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~ 895 (1302)
. ... ...+..++++|++. ...++||||++++||+
T Consensus 254 ----------------------~-~~~------~~~~~~l~v~~l~~-----------------~~~~~dvSf~vr~GEI 287 (500)
T COG1129 254 ----------------------P-PEE------GIGEPVLEVRNLSG-----------------GGKVRDVSFTVRAGEI 287 (500)
T ss_pred ----------------------c-ccc------CCCCcEEEEecCCC-----------------CCceeCceeEEeCCcE
Confidence 0 000 00112345555441 1257899999999999
Q ss_pred EEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh----hhhcceeEEeccCC---CCCCCCCHHHHHHHHHHhh
Q 000753 896 TALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQND---IHSPYVTVYESLLYSAWLR 968 (1302)
Q Consensus 896 ~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l~~~~~lr 968 (1302)
+||-|-=|||+|-|+++|+|... ...|+|.++|.+... ...+..++|||.|. -+++.++|.+|+.++...+
T Consensus 288 lGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~ 365 (500)
T COG1129 288 LGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRR 365 (500)
T ss_pred EEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhh
Confidence 99999999999999999999543 347999999997542 34566899999874 5788999999998873322
Q ss_pred CC-C-CCcHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHH
Q 000753 969 LS-S-DVDTKKRKMFVDEVMELVELKSLN-DSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1045 (1302)
Q Consensus 969 ~~-~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i 1045 (1302)
.. . -.+.....+.+++..+.+++.... +.. +..||||++||+.|||.|..+|++|||||||.|+|.-+...|
T Consensus 366 ~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eI 440 (500)
T COG1129 366 FSRRGLIDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEI 440 (500)
T ss_pred hccccccChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHH
Confidence 21 1 245566667889999999986432 233 458999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000753 1046 MRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1302)
Q Consensus 1046 ~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~ 1091 (1302)
.++|++++++|++||++|-++. |+...||||++|.+ |+++..=+
T Consensus 441 y~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~e~~ 484 (500)
T COG1129 441 YRLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVGELD 484 (500)
T ss_pred HHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEEEec
Confidence 9999999999999999999985 89999999999985 78876433
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=2.2e-51 Score=517.36 Aligned_cols=200 Identities=19% Similarity=0.248 Sum_probs=156.0
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++ +++.+|+|+||+|++|+++||+|||||||||||++|+|... +.+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 478888887552 12359999999999999999999999999999999999765 34789988652
Q ss_pred ChhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHH
Q 000753 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQR 1012 (1302)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqr 1012 (1302)
..+||++|+.. +.+++.++..+......+ ... .+.+.++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~~--~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHHV--DGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEecccc--ccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 35899999753 445666664332111111 111 234788999999974 45554 457999999
Q ss_pred HHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEE-EecC
Q 000753 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI-YAGP 1091 (1302)
Q Consensus 1013 qRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~-~~g~ 1091 (1302)
|||+||++|+.+|++|||||||+|||+.+...+.+.|++. . .|||++||++. .+...||++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999998888765 3 49999999986 46678999999985 6776 6775
Q ss_pred C
Q 000753 1092 L 1092 (1302)
Q Consensus 1092 ~ 1092 (1302)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 3
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=5.6e-51 Score=491.97 Aligned_cols=222 Identities=28% Similarity=0.322 Sum_probs=174.3
Q ss_pred ccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCCC
Q 000753 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 261 (1302)
..+++|+|+|+.+.+|+.++|+|+|||||||||++|+|...|+ +|+|...+ .-.++|++|++...+..|
T Consensus 14 g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~t 82 (530)
T COG0488 14 GDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKT 82 (530)
T ss_pred CCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCcc
Confidence 4567999999999999999999999999999999999999987 99998754 237999999999999999
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCCh---hHHHHH-HHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDP---EIDAFM-KAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~---~~~~~~-~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
|.+.+.-+.. ..++...++...... .+++ ..+... ......+++.+..+..++..||++.. ++.+++
T Consensus 83 v~~~v~~~~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~ 153 (530)
T COG0488 83 VLDYVIEGFG-----ELRELLAELEEAYAL---LADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSS 153 (530)
T ss_pred HHHHHHhhhH-----HHHHHHHHHHHHHHh---cccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhh
Confidence 9999976432 223333222222111 1111 111111 11224456677788999999999988 899988
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
||||||.||++|++|+.+|++|+|||||++||..+..++.+.|++. .| |+|++ .|.....-+.|++|+-+
T Consensus 154 -----LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~---~g-tviiV-SHDR~FLd~V~t~I~~l 223 (530)
T COG0488 154 -----LSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY---PG-TVIVV-SHDRYFLDNVATHILEL 223 (530)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC---CC-cEEEE-eCCHHHHHHHhhheEEe
Confidence 9999999999999999999999999999999999999999999864 24 55554 56677888899999999
Q ss_pred cCCeE-EEEcChhHHHH
Q 000753 418 SEGQI-VYQGPRDNVLE 433 (1302)
Q Consensus 418 ~~G~i-v~~G~~~~~~~ 433 (1302)
+.|++ .|.|+++...+
T Consensus 224 d~g~l~~y~Gny~~~~~ 240 (530)
T COG0488 224 DRGKLTPYKGNYSSYLE 240 (530)
T ss_pred cCCceeEecCCHHHHHH
Confidence 99977 67888876554
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=2.5e-49 Score=453.13 Aligned_cols=458 Identities=23% Similarity=0.319 Sum_probs=354.4
Q ss_pred ccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCcc----ceEEEEccCCCCC
Q 000753 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ----RTCAYISQHDLHH 257 (1302)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 257 (1302)
....+++|||+.|++||+.||+|.||||||||+++|.|.+.|+ +|+|.++|++..-..|+ ..||+|.||..++
T Consensus 15 ~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv 91 (501)
T COG3845 15 PGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLV 91 (501)
T ss_pred CCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeeccccc
Confidence 3677999999999999999999999999999999999999998 99999999988665553 4699999999999
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
+++||.|||..+..-... .+.+ . ......++.+.+.+||+-..|..|++
T Consensus 92 ~~lTV~ENiiLg~e~~~~-~~~~------~------------------------~~~~~~i~~l~~~yGl~vdp~~~V~d 140 (501)
T COG3845 92 PTLTVAENIILGLEPSKG-GLID------R------------------------RQARARIKELSERYGLPVDPDAKVAD 140 (501)
T ss_pred cccchhhhhhhcCccccc-cccC------H------------------------HHHHHHHHHHHHHhCCCCCccceeec
Confidence 999999999987542100 0000 0 01123467788999999999999998
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
||=||||||.|-++|+.+|++|+|||||+-|-|....++.+.|+++++. |+|+|+.. |-..|+.+.+|++.||
T Consensus 141 -----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~-G~tIi~IT-HKL~Ev~~iaDrvTVL 213 (501)
T COG3845 141 -----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAE-GKTIIFIT-HKLKEVMAIADRVTVL 213 (501)
T ss_pred -----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHC-CCEEEEEe-ccHHHHHHhhCeeEEE
Confidence 9999999999999999999999999999999999999999999999874 77877765 5578999999999999
Q ss_pred cCCeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhChhcHhHHhhh
Q 000753 418 SEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDL 497 (1302)
Q Consensus 418 ~~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l 497 (1302)
..|+++-.-++ .. + .+.++.++
T Consensus 214 R~Gkvvgt~~~--~~-----------------~------------------------~t~~ela~--------------- 235 (501)
T COG3845 214 RRGKVVGTVDP--VA-----------------E------------------------TTEEELAE--------------- 235 (501)
T ss_pred eCCeEEeeecC--CC-----------------C------------------------CCHHHHHH---------------
Confidence 99998633210 00 0 00000000
Q ss_pred cCCCCcccCCCCccccccccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcchhH
Q 000753 498 RVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYF 577 (1302)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~ 577 (1302)
+
T Consensus 236 ------------------------------------l------------------------------------------- 236 (501)
T COG3845 236 ------------------------------------L------------------------------------------- 236 (501)
T ss_pred ------------------------------------H-------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccchhhHHHHHHHHhhcHHHHHHHHHHHHHhhccCCcchHHHHHH
Q 000753 578 GALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFK 657 (1302)
Q Consensus 578 g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~ 657 (1302)
|+|-
T Consensus 237 -------------------------------------------------------------------MvG~--------- 240 (501)
T COG3845 237 -------------------------------------------------------------------MVGR--------- 240 (501)
T ss_pred -------------------------------------------------------------------hcCC---------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHcHHHHHHHHHHHHHhhC
Q 000753 658 QFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLG 737 (1302)
Q Consensus 658 ~~l~~~~~~~~~~~l~~~i~a~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~Y~~~al~~nef~~ 737 (1302)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T COG3845 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccCCCCCCCcccchhHHHHhhcCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeeccchhhhcc
Q 000753 738 GRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRAS 817 (1302)
Q Consensus 738 ~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 817 (1302)
.+.
T Consensus 241 -------------------~v~---------------------------------------------------------- 243 (501)
T COG3845 241 -------------------EVV---------------------------------------------------------- 243 (501)
T ss_pred -------------------ccc----------------------------------------------------------
Confidence 000
Q ss_pred CcccchhhhhhccccccccccccccCCccccccCCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEE
Q 000753 818 GHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTA 897 (1302)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~a 897 (1302)
..... .. .. | .+..++++|++...+ .....+++|||++++||++|
T Consensus 244 --------~~~~~-------~~--~~-----p-g~~vL~V~~L~v~~~------------~~~~~v~~vs~~Vr~GEIvG 288 (501)
T COG3845 244 --------LRVVK-------PP--ST-----P-GEVVLEVEDLSVKDR------------RGVTAVKDVSFEVRAGEIVG 288 (501)
T ss_pred --------ccccc-------CC--CC-----C-CCeEEEEeeeEeecC------------CCCceeeeeeeEEecCcEEE
Confidence 00000 00 00 0 022456666653221 12458999999999999999
Q ss_pred EecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC----Ch-hhhcceeEEeccCC---CCCCCCCHHHHHHHHHHhh-
Q 000753 898 LMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK----NQ-ETFARVSGYCEQND---IHSPYVTVYESLLYSAWLR- 968 (1302)
Q Consensus 898 l~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~----~~-~~~~~~~gyv~Q~~---~~~~~lTv~E~l~~~~~lr- 968 (1302)
|.|..|-|.+.|+.+|+|..+. ..|+|.++|.+. +. +..+..+||||.|. .+.+.+|+.||+.+...-+
T Consensus 289 IAGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~ 366 (501)
T COG3845 289 IAGVAGNGQSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKK 366 (501)
T ss_pred EEecCCCCHHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhcccc
Confidence 9999999999999999997642 349999999985 22 22345689999986 3578999999998765321
Q ss_pred ---CCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHH
Q 000753 969 ---LSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1045 (1302)
Q Consensus 969 ---~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i 1045 (1302)
...-.+.....+...++++.++.....-. .....||||++||+-+||+|.++|++|++.+||.|||..+.+.|
T Consensus 367 ~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~----~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I 442 (501)
T COG3845 367 PFSRGGFLDRRAIRKFARELIEEFDVRAPSPD----APARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFI 442 (501)
T ss_pred ccccccccCHHHHHHHHHHHHHHcCccCCCCC----cchhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHH
Confidence 11124456677888999999988632211 12468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1046 MRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1046 ~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
.+.|.+.+++|+.|++++-+++ ++++.+|+|.+|.+ |+++...++.
T Consensus 443 ~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~ 488 (501)
T COG3845 443 HERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPE 488 (501)
T ss_pred HHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceecccccc
Confidence 9999999999999999999998 89999999999985 8888777654
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-45 Score=377.13 Aligned_cols=206 Identities=25% Similarity=0.374 Sum_probs=183.3
Q ss_pred ccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC----hhhhcceeEEeccCCCC
Q 000753 876 GEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN----QETFARVSGYCEQNDIH 951 (1302)
Q Consensus 876 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~----~~~~~~~~gyv~Q~~~~ 951 (1302)
.++..++|+|||++|++||+++|+|||||||||||++|.|+.. +.+|+|.++|.+.. ....|+.+|+|+|+..+
T Consensus 11 ~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnL 88 (240)
T COG1126 11 SFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVGDKKDILKLRRKVGMVFQQFNL 88 (240)
T ss_pred EeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEeccchhhHHHHHHhcCeecccccc
Confidence 3456789999999999999999999999999999999999876 35799999996542 34578899999999999
Q ss_pred CCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcccc
Q 000753 952 SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1302)
Q Consensus 952 ~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLD 1031 (1302)
||.+||.||+.++-..- ...++++.++...++|+.+||.+.+|.+ +..|||||||||+|||||+.+|+++++|
T Consensus 89 FPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----P~qLSGGQqQRVAIARALaM~P~vmLFD 161 (240)
T COG1126 89 FPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAY-----PAQLSGGQQQRVAIARALAMDPKVMLFD 161 (240)
T ss_pred cccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhC-----ccccCcHHHHHHHHHHHHcCCCCEEeec
Confidence 99999999999875432 2345677778899999999999999998 4589999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1032 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
||||+|||+....|.+.+++++++|.|.||+||++.. ..+.+||++.|++ |+++..|++
T Consensus 162 EPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g~p 220 (240)
T COG1126 162 EPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEGPP 220 (240)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEecCH
Confidence 9999999999999999999999999999999999864 5678999999985 889988875
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-43 Score=365.76 Aligned_cols=222 Identities=25% Similarity=0.403 Sum_probs=188.2
Q ss_pred ccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCC----CCccceEEEEccCCCCC
Q 000753 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNE----FVPQRTCAYISQHDLHH 257 (1302)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~----~~~~~~~~yv~Q~d~~~ 257 (1302)
...++|+|||++|++||+++|+|||||||||||++|.|+..++ +|+|.++|+++.. ...|+.+|+|+|+..+|
T Consensus 13 g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLF 89 (240)
T COG1126 13 GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLF 89 (240)
T ss_pred CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeeccccccc
Confidence 4567999999999999999999999999999999999999887 9999999976532 12468899999999999
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
|++||-||+..+...- ......+++......|+.+||.+.+|...+.
T Consensus 90 PHlTvleNv~lap~~v---------------------------------~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~q 136 (240)
T COG1126 90 PHLTVLENVTLAPVKV---------------------------------KKLSKAEAREKALELLEKVGLADKADAYPAQ 136 (240)
T ss_pred ccchHHHHHHhhhHHH---------------------------------cCCCHHHHHHHHHHHHHHcCchhhhhhCccc
Confidence 9999999998863211 0011122333456789999999999999877
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
|||||||||+|||||+.+|+++++|||||+|||....++.+.++++++. |.|++|++|. ....-+.+|||+.|
T Consensus 137 -----LSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e-GmTMivVTHE-M~FAr~VadrviFm 209 (240)
T COG1126 137 -----LSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE-GMTMIIVTHE-MGFAREVADRVIFM 209 (240)
T ss_pred -----cCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc-CCeEEEEech-hHHHHHhhheEEEe
Confidence 9999999999999999999999999999999999999999999999985 7898888765 45778899999999
Q ss_pred cCCeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHh
Q 000753 418 SEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQE 454 (1302)
Q Consensus 418 ~~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~e 454 (1302)
++|+++.+|+++++ |..|.+....+|+..
T Consensus 210 d~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 210 DQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred eCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 99999999999876 345666556667654
No 47
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=8.5e-42 Score=391.45 Aligned_cols=203 Identities=20% Similarity=0.218 Sum_probs=154.8
Q ss_pred CcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCc
Q 000753 852 PLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGY 931 (1302)
Q Consensus 852 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~ 931 (1302)
|..+.+.|+++.++. +..++++++|-|.+++.+|+|||||+||||||+++.|... +..|.+.-.-+
T Consensus 387 ~pvi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H 452 (614)
T KOG0927|consen 387 PPVIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSH 452 (614)
T ss_pred CCeEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--ccccccccccc
Confidence 345788888875532 2268999999999999999999999999999999999765 34566653322
Q ss_pred cCChhhhcceeEEeccCCC--CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000753 932 PKNQETFARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1302)
Q Consensus 932 ~~~~~~~~~~~gyv~Q~~~--~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1302)
.++++..|+.. +--..++-|+++=.. ....+.+.+..++..+||....+.. ..+.||+
T Consensus 453 --------~~~~~y~Qh~~e~ldl~~s~le~~~~~~--------~~~~~~e~~r~ilgrfgLtgd~q~~----p~~~LS~ 512 (614)
T KOG0927|consen 453 --------NKLPRYNQHLAEQLDLDKSSLEFMMPKF--------PDEKELEEMRSILGRFGLTGDAQVV----PMSQLSD 512 (614)
T ss_pred --------ccchhhhhhhHhhcCcchhHHHHHHHhc--------cccchHHHHHHHHHHhCCCcccccc----chhhccc
Confidence 12344444422 223456666553210 1123455688999999998544332 1568999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000753 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1302)
Q Consensus 1010 GqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~ 1089 (1302)
|||+||.+|+.++..|.||+|||||+|||..+...+.+.|.+. ..+||++|||.. -+.+.++++.+..+++...+.
T Consensus 513 Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfr-lI~qVaeEi~~c~~~~~~~~~ 588 (614)
T KOG0927|consen 513 GQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFR-LISQVAEEIWVCENGTVTKWD 588 (614)
T ss_pred ccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhh-HHHHHHHHhHhhccCceeecC
Confidence 9999999999999999999999999999999999999999875 468999999986 377889999999998888898
Q ss_pred cCC
Q 000753 1090 GPL 1092 (1302)
Q Consensus 1090 g~~ 1092 (1302)
|..
T Consensus 589 G~i 591 (614)
T KOG0927|consen 589 GDI 591 (614)
T ss_pred ccH
Confidence 875
No 48
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-42 Score=374.25 Aligned_cols=203 Identities=27% Similarity=0.355 Sum_probs=183.2
Q ss_pred cceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh------hhhcceeEEeccCCCCC
Q 000753 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHS 952 (1302)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~ 952 (1302)
...+|+|||++|++||++||+|.||||||||++++.+... +.+|.|.++|.++.. ..+|+.+|+++|+..++
T Consensus 18 ~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLL 95 (339)
T COG1135 18 TVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLL 95 (339)
T ss_pred ceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecccCChHHHHHHHhhccEEecccccc
Confidence 4679999999999999999999999999999999999766 458999999976532 34678899999999999
Q ss_pred CCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccC
Q 000753 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1302)
Q Consensus 953 ~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDE 1032 (1302)
...||+||+.|...+.. .++++.++++.++++.+||.+..+.+ +.+|||||||||+|||||+.+|+||++||
T Consensus 96 ssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~y-----P~qLSGGQKQRVaIARALa~~P~iLL~DE 167 (339)
T COG1135 96 SSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRY-----PAQLSGGQKQRVAIARALANNPKILLCDE 167 (339)
T ss_pred ccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccC-----chhcCcchhhHHHHHHHHhcCCCEEEecC
Confidence 99999999999987763 56788899999999999999999988 45899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1033 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
|||+|||.+.+.|.++|+++.+ -|.||+++||+++ -+...||++.+|++ |++++.|+..
T Consensus 168 aTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~~-G~lvE~G~v~ 227 (339)
T COG1135 168 ATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLDQ-GRLVEEGTVS 227 (339)
T ss_pred ccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEeeC-CEEEEeccHH
Confidence 9999999999999999999964 4999999999986 36678999999985 8999999864
No 49
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6e-42 Score=359.92 Aligned_cols=222 Identities=27% Similarity=0.385 Sum_probs=191.8
Q ss_pred ccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh------hhhcceeEEeccCC
Q 000753 876 GEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQND 949 (1302)
Q Consensus 876 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~ 949 (1302)
+++.+.||+|||++|++||+++||||||+||||||++|.|..++ .+|+|.++|.++.+ ...++++|+++|+-
T Consensus 17 ~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~g 94 (263)
T COG1127 17 SFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGEDIPQLSEEELYEIRKRMGVLFQQG 94 (263)
T ss_pred ecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcchhccCHHHHHHHHhheeEEeecc
Confidence 34567899999999999999999999999999999999998763 48999999998643 24567899999999
Q ss_pred CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 000753 950 IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII 1028 (1302)
Q Consensus 950 ~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~il 1028 (1302)
.+|..+||+||+.|.. |.....+++..++.+..-|+.+||... .+.. +++|||||+||++|||||+.+|+||
T Consensus 95 ALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsELSGGM~KRvaLARAialdPell 167 (263)
T COG1127 95 ALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSELSGGMRKRVALARAIALDPELL 167 (263)
T ss_pred ccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chhhcchHHHHHHHHHHHhcCCCEE
Confidence 9999999999999864 334456777778888889999999887 6665 5689999999999999999999999
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCcc----hhhHHHHH
Q 000753 1029 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHE----SHKLIEYF 1103 (1302)
Q Consensus 1029 lLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~~----~~~~~~~f 1103 (1302)
|+||||+||||.++..+-++|+++.++ |.|++++|||.+ +++..||++++|.+ |+|+..|++.+. ...+.+||
T Consensus 168 ~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gkv~~~Gt~~el~~sd~P~v~qf~ 245 (263)
T COG1127 168 FLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GKVIAEGTPEELLASDDPWVRQFF 245 (263)
T ss_pred EecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CEEEEeCCHHHHHhCCCHHHHHHh
Confidence 999999999999999999999999765 899999999987 68899999999986 899999997542 22356777
Q ss_pred HhCCC
Q 000753 1104 EAVPG 1108 (1302)
Q Consensus 1104 ~~~~~ 1108 (1302)
....+
T Consensus 246 ~G~~~ 250 (263)
T COG1127 246 NGIRD 250 (263)
T ss_pred cCCCC
Confidence 65543
No 50
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8.5e-42 Score=389.80 Aligned_cols=205 Identities=31% Similarity=0.460 Sum_probs=182.9
Q ss_pred ccc-cceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh--hhhcceeEEeccCCCCC
Q 000753 876 GED-RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHS 952 (1302)
Q Consensus 876 ~~~-~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~ 952 (1302)
.++ ++.+|+||||+|++||++||+|||||||||||++|+|...+ .+|+|.++|.+... ...++.+||++|++.++
T Consensus 13 ~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~ 90 (293)
T COG1131 13 KYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDVVKEPAKVRRRIGYVPQEPSLY 90 (293)
T ss_pred EeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeCccCHHHHHhheEEEccCCCCC
Confidence 345 47899999999999999999999999999999999997763 58999999987654 46778899999999999
Q ss_pred CCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccC
Q 000753 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1302)
Q Consensus 953 ~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDE 1032 (1302)
+.+||+|+|.|.+.++.... ...++.++++++.++|.+..++. +++||+||||||+||+||+++|++|||||
T Consensus 91 ~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~kqrl~ia~aL~~~P~lliLDE 162 (293)
T COG1131 91 PELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGMKQRLSIALALLHDPELLILDE 162 (293)
T ss_pred ccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHHHHHHHHHHHhcCCCEEEECC
Confidence 99999999999999886543 34456799999999999855554 45899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1033 PTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~~g-~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
||+||||.++..+++.|++++++| +||+++||+++ ++...||++++|++ |++++.|++
T Consensus 163 Pt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g~~ 221 (293)
T COG1131 163 PTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEGTP 221 (293)
T ss_pred CCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeCCH
Confidence 999999999999999999999887 89999999987 67788999999985 899999975
No 51
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-41 Score=368.38 Aligned_cols=218 Identities=28% Similarity=0.422 Sum_probs=184.0
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.++ ...+|+|||+++++|++++|+||||||||||+++|.|..+ +.+|+|.+.|.+.
T Consensus 4 ~i~v~nl~v~y~-------------~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG-------------NRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC-------------CEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 467888887653 2259999999999999999999999999999999999665 3589999999876
Q ss_pred ChhhhcceeEEeccCCCC--CCCCCHHHHHHHHHHhhCC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000753 934 NQETFARVSGYCEQNDIH--SPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1302)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~--~~~lTv~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1302)
....-+..+|||||...+ ...+||+|-+..+...+.+ .....++.++.++++|+.+|+.+++|+.+| .||||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSGG 143 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIG-----ELSGG 143 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCccc-----ccCcH
Confidence 554445679999996533 2248999999886433221 111123346779999999999999999976 69999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1011 qrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
|+||+.|||||+.+|++|+|||||+|+|+.++..++++|++++++|+|||+++||++ .+.+.||+++.|+ +++++.|
T Consensus 144 Q~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~G 220 (254)
T COG1121 144 QKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIASG 220 (254)
T ss_pred HHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEecc
Confidence 999999999999999999999999999999999999999999988999999999997 5888999999997 5899999
Q ss_pred CCCc
Q 000753 1091 PLGH 1094 (1302)
Q Consensus 1091 ~~~~ 1094 (1302)
++.+
T Consensus 221 ~~~~ 224 (254)
T COG1121 221 PPEE 224 (254)
T ss_pred Chhh
Confidence 9865
No 52
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.4e-41 Score=371.39 Aligned_cols=218 Identities=30% Similarity=0.439 Sum_probs=187.1
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
++.+|+++.+ +++.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 3 L~~~~ls~~y-------------~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i~ 67 (258)
T COG1120 3 LEVENLSFGY-------------GGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDIA 67 (258)
T ss_pred eEEEEEEEEE-------------CCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCchh
Confidence 5667776654 45789999999999999999999999999999999999766 34799999998864
Q ss_pred ---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCC-CCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000753 935 ---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSS-DVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1302)
Q Consensus 935 ---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1302)
...+++.+|||||.......+||+|.+.++..-+... ....++..+.++++|+.+++.+++++.+ ..||||
T Consensus 68 ~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSGG 142 (258)
T COG1120 68 SLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSGG 142 (258)
T ss_pred hcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccChh
Confidence 3567889999999998888999999999875432221 1123334457999999999999999985 479999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000753 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1302)
Q Consensus 1011 qrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~ 1089 (1302)
||||+.|||||+++|+||+||||||+||...+..|++++++++ ++|+|||++.||++. ...+||++++|++ |+++..
T Consensus 143 erQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a~ 220 (258)
T COG1120 143 ERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVAQ 220 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEee
Confidence 9999999999999999999999999999999999999999998 459999999999974 7789999999985 899999
Q ss_pred cCCCc
Q 000753 1090 GPLGH 1094 (1302)
Q Consensus 1090 g~~~~ 1094 (1302)
|++.+
T Consensus 221 G~p~e 225 (258)
T COG1120 221 GTPEE 225 (258)
T ss_pred cCcch
Confidence 99764
No 53
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-41 Score=363.27 Aligned_cols=203 Identities=26% Similarity=0.392 Sum_probs=178.7
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++++++.+ +...+|+|||++|.+||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~i~~v~~~f-------------~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v~ 68 (248)
T COG1116 4 LEIEGVSKSF-------------GGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPVT 68 (248)
T ss_pred EEEEeeEEEe-------------CceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCcccC
Confidence 5666666544 33679999999999999999999999999999999999876 35899999998873
Q ss_pred hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000753 935 QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKR 1014 (1302)
Q Consensus 935 ~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqR 1014 (1302)
.....+|||+|++.++|.+||+||+.|+...+. ...+++.+.+.++|+.+||.++.|.. +++||||||||
T Consensus 69 --~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQR 138 (248)
T COG1116 69 --GPGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQR 138 (248)
T ss_pred --CCCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHHH
Confidence 234668999999999999999999999876653 34556667899999999999999998 56899999999
Q ss_pred HHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000753 1015 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1302)
Q Consensus 1015 l~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~t~H~~~~~~~~~~D~i~~l~~g 1083 (1302)
|+|||||+.+|+||+||||+++||+.++..+++.|.++. +.++|||++|||.+ |...++|||++|.++
T Consensus 139 VaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 139 VAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 999999999999999999999999999999999999986 45899999999987 777889999999864
No 54
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-41 Score=358.03 Aligned_cols=205 Identities=25% Similarity=0.357 Sum_probs=183.8
Q ss_pred cccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh---hhhcceeEEeccCCCCCC
Q 000753 877 EDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSP 953 (1302)
Q Consensus 877 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~ 953 (1302)
+..+.+++|+|++|++||+++++|||||||||+|++|.+... +.+|+|.+||.++.. ..+||.+|||-|.-.+||
T Consensus 11 y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFP 88 (309)
T COG1125 11 YGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDISDLDPVELRRKIGYVIQQIGLFP 88 (309)
T ss_pred cCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecccCCHHHHHHhhhhhhhhcccCC
Confidence 346789999999999999999999999999999999999776 458999999998754 568899999999999999
Q ss_pred CCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcccc
Q 000753 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS--LNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1302)
Q Consensus 954 ~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLD 1031 (1302)
++||.||+.+--.+. ..++++.+++++|+|++++|.+ +.+++ +++|||||+||+.+||||+++|+||+||
T Consensus 89 h~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSGGQQQRVGv~RALAadP~ilLMD 160 (309)
T COG1125 89 HLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSGGQQQRVGVARALAADPPILLMD 160 (309)
T ss_pred CccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCcchhhHHHHHHHHhcCCCeEeec
Confidence 999999998765543 4567788899999999999975 77777 5689999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1032 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
||+++|||.++..+++.++++.++ |+|||++|||.+ |.+.++|++++|+ +|+++-.+++.
T Consensus 161 EPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q~~~P~ 221 (309)
T COG1125 161 EPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQYDTPD 221 (309)
T ss_pred CCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEEeCCHH
Confidence 999999999999999999999654 999999999987 7889999999998 57888887764
No 55
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.3e-41 Score=381.91 Aligned_cols=217 Identities=29% Similarity=0.406 Sum_probs=194.4
Q ss_pred EeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCcc-ceEEEEccCCCCCCCCCHHH
Q 000753 186 ILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ-RTCAYISQHDLHHGEMTVRE 264 (1302)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~-~~~~yv~Q~d~~~~~lTVrE 264 (1302)
+|+|+|+.|++||+++|+|||||||||||++|||+.+|+ +|+|.++|.+++...|+ |.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999998 99999999999998774 88999999999999999999
Q ss_pred HHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCC
Q 000753 265 TLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGIS 344 (1302)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLS 344 (1302)
|+.|+.+.++.. . .+.+.+++++.+.|+|++..|+.... ||
T Consensus 95 Niaf~Lk~~~~~--------------------k--------------~ei~~rV~eva~~L~l~~lL~r~P~~-----LS 135 (338)
T COG3839 95 NIAFGLKLRGVP--------------------K--------------AEIDKRVKEVAKLLGLEHLLNRKPLQ-----LS 135 (338)
T ss_pred HhhhhhhhCCCc--------------------h--------------HHHHHHHHHHHHHcCChhHHhcCccc-----CC
Confidence 999998776531 0 11234577899999999999999876 99
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEEE
Q 000753 345 GGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVY 424 (1302)
Q Consensus 345 GGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv~ 424 (1302)
|||||||++||||+.+|++++||||+|.||+..+.++...++++.+.++.|+|..+|. ..|...++|+|.+|++|++..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHD-q~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHD-QVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCC-HHHHHhhCCEEEEEeCCeeee
Confidence 9999999999999999999999999999999999999999999988888888887665 469999999999999999999
Q ss_pred EcChhHHHHHHHhcCCCCCCCCChHHHHH
Q 000753 425 QGPRDNVLEFFEHMGFKCPERKGVADFLQ 453 (1302)
Q Consensus 425 ~G~~~~~~~~f~~lG~~~p~~~~~adfl~ 453 (1302)
.|++.++. ..|.+.-+|.|+-
T Consensus 215 ~g~p~ely--------~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLELY--------ERPANLFVAGFIG 235 (338)
T ss_pred cCChHHHh--------hCccchhhhhhcC
Confidence 99999984 4577777777754
No 56
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-41 Score=364.14 Aligned_cols=224 Identities=27% Similarity=0.357 Sum_probs=195.2
Q ss_pred ccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCCC
Q 000753 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDL 255 (1302)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~ 255 (1302)
...++|+|||+.|++|++.+|+|+||||||||++++.++-.|+ +|+|.++|+++.... .|+.||+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3567999999999999999999999999999999999999998 999999998876653 3578999999999
Q ss_pred CCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccc
Q 000753 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1302)
Q Consensus 256 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1302)
++...||.||++|..+..+.. + .+.+.++.++++.+||++.+|...
T Consensus 94 LLssrTV~~NvA~PLeiag~~----------k------------------------~ei~~RV~elLelVgL~dk~~~yP 139 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP----------K------------------------AEIKQRVAELLELVGLSDKADRYP 139 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhccCc
Confidence 999999999999987765521 1 112345778999999999999998
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEE
Q 000753 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1302)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ii 415 (1302)
.+ |||||||||+|||||+.+|+||+.|||||+|||.|+..|.+.|+++.+++|.|+++..|+. .-+-+.||+|.
T Consensus 140 ~q-----LSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm-~Vvk~ic~rVa 213 (339)
T COG1135 140 AQ-----LSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEM-EVVKRICDRVA 213 (339)
T ss_pred hh-----cCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechH-HHHHHHhhhhe
Confidence 87 9999999999999999999999999999999999999999999999999999998888775 46778999999
Q ss_pred EecCCeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhhc
Q 000753 416 LLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVT 456 (1302)
Q Consensus 416 lL~~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev~ 456 (1302)
+|++|+++++|+..++. ..|.+.-.-+|+.+..
T Consensus 214 vm~~G~lvE~G~v~~vF--------~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEVF--------ANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHhh--------cCcchHHHHHHHHhhc
Confidence 99999999999998873 3465555556665544
No 57
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7.4e-41 Score=382.06 Aligned_cols=212 Identities=32% Similarity=0.474 Sum_probs=186.2
Q ss_pred cceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC--CccceEEEEccCCCCCCCC
Q 000753 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF--VPQRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 260 (1302)
.+.+|+|||++|++|++++|+|||||||||||++|+|.+.|+ +|+|.++|++.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 578999999999999999999999999999999999999997 99999999887652 3457899999999999999
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
||+|||.|.+++++.... .....++++++.+||++..++.+++
T Consensus 94 T~~e~l~~~~~l~~~~~~----------------------------------~~~~~~~~~l~~~~L~~~~~~~~~~--- 136 (293)
T COG1131 94 TVRENLEFFARLYGLSKE----------------------------------EAEERIEELLELFGLEDKANKKVRT--- 136 (293)
T ss_pred cHHHHHHHHHHHhCCChh----------------------------------HHHHHHHHHHHHcCCchhhCcchhh---
Confidence 999999999888764310 0122467899999999866666765
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
||+||||||+||.||+++|+++||||||+|||+.++.++++.|+++++..+.|++++.|++ .++..+||+|++|++|
T Consensus 137 --lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l-~e~~~~~d~v~il~~G 213 (293)
T COG1131 137 --LSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHIL-EEAEELCDRVIILNDG 213 (293)
T ss_pred --cCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcH-HHHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999986557888887665 5888999999999999
Q ss_pred eEEEEcChhHHHHHHHh
Q 000753 421 QIVYQGPRDNVLEFFEH 437 (1302)
Q Consensus 421 ~iv~~G~~~~~~~~f~~ 437 (1302)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999997765543
No 58
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-41 Score=345.59 Aligned_cols=202 Identities=30% Similarity=0.405 Sum_probs=184.0
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC--hhhhcceeEEeccCCCCCCCCCH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN--QETFARVSGYCEQNDIHSPYVTV 957 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~--~~~~~~~~gyv~Q~~~~~~~lTv 957 (1302)
.++++||||+++.||++||+|+|||||||+|++|++... +.+|.|+++|.+.. ....++.+|.++.+..++..||+
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~ 92 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTA 92 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccccChHHHhhhcceecCCcChhhhhhH
Confidence 349999999999999999999999999999999999776 35899999999863 35578899999988889999999
Q ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 000753 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1302)
Q Consensus 958 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgL 1037 (1302)
+|||.|.+.+. +....+.+++++++.+.++|.++.|+.++ ++|.|+||||+|||||+++|++++||||||||
T Consensus 93 rEnl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGL 164 (245)
T COG4555 93 RENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGL 164 (245)
T ss_pred HHHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCc
Confidence 99999999886 34456677889999999999999999976 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
|..+.+.+.+.++++.++|++||++||.++ ++...||++++|++ |++++.|++.
T Consensus 165 Di~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~ 218 (245)
T COG4555 165 DIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIE 218 (245)
T ss_pred cHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHH
Confidence 999999999999999988999999999986 77779999999986 7999999864
No 59
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-41 Score=352.46 Aligned_cols=222 Identities=29% Similarity=0.379 Sum_probs=187.3
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|++-.++ +++++|+|||++|++||++||+|+|||||||||++|.|..+ +..|+|.++|.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 467777764432 46789999999999999999999999999999999999765 4589999999764
Q ss_pred Ch------hhhcceeEEeccCCCCCCCCCHHHHHHHHHH-----hhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCC
Q 000753 934 NQ------ETFARVSGYCEQNDIHSPYVTVYESLLYSAW-----LRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLP 1002 (1302)
Q Consensus 934 ~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~-----lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~ 1002 (1302)
.. ..+++.+||++|++.+.+.++|.+|++.+.. ++.-.....++.+..+-++|+.+|+.+.+.+..
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--- 145 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--- 145 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh---
Confidence 32 3467889999999999999999999987642 221123344555667889999999998888774
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+.|||||+|||+|||||+.+|+||+.|||+++|||.+++.||+.|+++.+ .|.|||++.|+.++ ..++|||++-|+
T Consensus 146 --~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 146 --STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred --ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 47999999999999999999999999999999999999999999999964 59999999999874 667899999998
Q ss_pred cCcEEEEecCCCcch
Q 000753 1082 RGGRVIYAGPLGHES 1096 (1302)
Q Consensus 1082 ~gG~~~~~g~~~~~~ 1096 (1302)
+ |+++|+||..+..
T Consensus 223 ~-G~ivfDg~~~el~ 236 (258)
T COG3638 223 A-GRIVFDGPASELT 236 (258)
T ss_pred C-CcEEEeCChhhhh
Confidence 5 8999999986543
No 60
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.1e-40 Score=357.48 Aligned_cols=193 Identities=30% Similarity=0.462 Sum_probs=167.6
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh------hhh-cceeEEeccCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETF-ARVSGYCEQNDIHS 952 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~-~~~~gyv~Q~~~~~ 952 (1302)
..+|++||++|++||+++|||||||||||||++|.|...+ .+|.+.++|.+... ..+ ++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 6799999999999999999999999999999999997664 57999999976532 223 35699999999999
Q ss_pred CCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccccc-ccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcccc
Q 000753 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLND-SMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1302)
Q Consensus 953 ~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~-~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLD 1031 (1302)
|.+||.||+.+...+.... .....+.++++++.+||.+..+ .. +.+|||||||||+|||||+.+|+|||.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~~---~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGKS---AGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCCC---hhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 9999999999877554322 2245667899999999987666 54 4589999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000753 1032 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1302)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~ 1085 (1302)
|||.+||+.+...|++++++++++ |+|||++|||+ ++...|||++.|.+ |+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~d-G~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKD-GK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeC-Ce
Confidence 999999999999999999999755 99999999996 57889999999997 44
No 61
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=9.4e-41 Score=380.20 Aligned_cols=223 Identities=29% Similarity=0.418 Sum_probs=198.6
Q ss_pred cceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-cceEEEEccCCCCCCCCC
Q 000753 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 261 (1302)
...+|+|+|+.|++||+++|+|||||||||||++|||+..|+ +|+|.++|++++...+ +|.+++|+|+..+||+||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 567999999999999999999999999999999999999998 9999999999998776 588999999999999999
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
|+||+.|+.+.+... ++. +...+++++++.++|++.++..+.+
T Consensus 94 V~~NVafGLk~~~~~-------------------~~~--------------~i~~rv~e~L~lV~L~~~~~R~p~q---- 136 (352)
T COG3842 94 VEENVAFGLKVRKKL-------------------KKA--------------EIKARVEEALELVGLEGFADRKPHQ---- 136 (352)
T ss_pred HHHHhhhhhhhcCCC-------------------CHH--------------HHHHHHHHHHHHcCchhhhhhChhh----
Confidence 999999987743211 001 1233578899999999999998877
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
|||||+|||++||||+.+|++||||||.|+||..-+.++...|+++.+..|.|.|..+|+ ..|.+.++|+|++|++|+
T Consensus 137 -LSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHD-qeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 137 -LSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHD-QEEALAMSDRIAVMNDGR 214 (352)
T ss_pred -hChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECC-HHHHhhhccceEEccCCc
Confidence 999999999999999999999999999999999999999999999999998888887665 569999999999999999
Q ss_pred EEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhh
Q 000753 422 IVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEV 455 (1302)
Q Consensus 422 iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev 455 (1302)
|...|+++++ |..|...-+|+|+-+.
T Consensus 215 I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 215 IEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred eeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999998 4568888888888653
No 62
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.9e-40 Score=362.48 Aligned_cols=211 Identities=28% Similarity=0.423 Sum_probs=183.4
Q ss_pred cceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCCCC
Q 000753 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGE 259 (1302)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 259 (1302)
+++||+|+|+++++|++++|+||||||||||||+|+|.++|. +|+|.++|+++..... .+.+|||||.....+.
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~ 90 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFG 90 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCC
Confidence 457999999999999999999999999999999999999987 9999999999887654 4789999999988889
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
+||+|.+.++..-... .... ...+....++..|+.+|+.+.+++.+.+
T Consensus 91 ~tV~d~V~~GR~p~~~------------------~~~~------------~~~~D~~~v~~aL~~~~~~~la~r~~~~-- 138 (258)
T COG1120 91 LTVYELVLLGRYPHLG------------------LFGR------------PSKEDEEIVEEALELLGLEHLADRPVDE-- 138 (258)
T ss_pred cEEeehHhhcCCcccc------------------cccC------------CCHhHHHHHHHHHHHhCcHHHhcCcccc--
Confidence 9999999886432100 0000 0011122467789999999999999987
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||.||+||+.+|++|+||||||+||...+.++++.+++++++.|.|+|+++|.+ .....+||++++|++
T Consensus 139 ---LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDl-N~A~ryad~~i~lk~ 214 (258)
T COG1120 139 ---LSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDL-NLAARYADHLILLKD 214 (258)
T ss_pred ---cChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999999988889999888776 578899999999999
Q ss_pred CeEEEEcChhHHH
Q 000753 420 GQIVYQGPRDNVL 432 (1302)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1302)
|+++.+|++++++
T Consensus 215 G~i~a~G~p~evl 227 (258)
T COG1120 215 GKIVAQGTPEEVL 227 (258)
T ss_pred CeEEeecCcchhc
Confidence 9999999998875
No 63
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-40 Score=347.01 Aligned_cols=209 Identities=27% Similarity=0.391 Sum_probs=186.1
Q ss_pred ccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCCCCC
Q 000753 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHG 258 (1302)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 258 (1302)
..+.+++|+|++|++||+++++|||||||||+|++|.+++.|+ +|+|.+||+++.+.. .|+.+|||-|+-.+||
T Consensus 12 ~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFP 88 (309)
T COG1125 12 GNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFP 88 (309)
T ss_pred CCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCC
Confidence 3567999999999999999999999999999999999999998 999999999987654 4789999999999999
Q ss_pred CCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc--ccccccc
Q 000753 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI--CADTMVG 336 (1302)
Q Consensus 259 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg 336 (1302)
++||.||+.+--.+.+-. .++.+.+++++++.+||+. ..|+...
T Consensus 89 h~Tv~eNIa~VP~L~~w~----------------------------------k~~i~~r~~ELl~lvgL~p~~~~~RyP~ 134 (309)
T COG1125 89 HLTVAENIATVPKLLGWD----------------------------------KERIKKRADELLDLVGLDPSEYADRYPH 134 (309)
T ss_pred CccHHHHHHhhhhhcCCC----------------------------------HHHHHHHHHHHHHHhCCCHHHHhhcCch
Confidence 999999998865544321 0122345788999999974 6777776
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEE
Q 000753 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1302)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iil 416 (1302)
+ |||||+|||.+||||+.+|+|++||||+++|||.++.++.+.++++.+..++|+|++.| ...|.+.++|+|++
T Consensus 135 e-----LSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTH-DidEA~kLadri~v 208 (309)
T COG1125 135 E-----LSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTH-DIDEALKLADRIAV 208 (309)
T ss_pred h-----cCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEec-CHHHHHhhhceEEE
Confidence 6 99999999999999999999999999999999999999999999999999999888765 56899999999999
Q ss_pred ecCCeEEEEcChhHHHH
Q 000753 417 LSEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 417 L~~G~iv~~G~~~~~~~ 433 (1302)
|++|+++..+++++++.
T Consensus 209 m~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 209 MDAGEIVQYDTPDEILA 225 (309)
T ss_pred ecCCeEEEeCCHHHHHh
Confidence 99999999999999874
No 64
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-40 Score=358.81 Aligned_cols=207 Identities=30% Similarity=0.467 Sum_probs=186.1
Q ss_pred ccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCc---cCCh-hhhcceeEEeccCCCCCC
Q 000753 878 DRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGY---PKNQ-ETFARVSGYCEQNDIHSP 953 (1302)
Q Consensus 878 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~---~~~~-~~~~~~~gyv~Q~~~~~~ 953 (1302)
+...+++|||+.|+.||++||+|||||||||||++|||..++ ..|.|.+||. +.++ ....|++|||+|+..+|+
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p--~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETP--DAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCC--CCceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 346789999999999999999999999999999999998774 5899999998 5544 334578999999999999
Q ss_pred CCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCC
Q 000753 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1302)
Q Consensus 954 ~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEP 1033 (1302)
.|||.||+.|+...+ ....+..+.+.++.++|+.++|+++.+++ +.+||||||||+++||||+..|++|+||||
T Consensus 91 HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEP 164 (345)
T COG1118 91 HMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEP 164 (345)
T ss_pred cchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCC
Confidence 999999999998776 33455677888999999999999999998 568999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCc
Q 000753 1034 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1302)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~ 1094 (1302)
+++||+.-+..+.+.|+++.++ |.|+|++|||+. +..+.+|++++|++ |+|+..||+.+
T Consensus 165 f~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~e 224 (345)
T COG1118 165 FGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPDE 224 (345)
T ss_pred chhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHHH
Confidence 9999999999999999999765 999999999986 89999999999986 89999998743
No 65
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-40 Score=357.01 Aligned_cols=224 Identities=29% Similarity=0.474 Sum_probs=190.2
Q ss_pred ccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCc---ccCCCCc-cceEEEEccCCCCC
Q 000753 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGH---ELNEFVP-QRTCAYISQHDLHH 257 (1302)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~---~~~~~~~-~~~~~yv~Q~d~~~ 257 (1302)
....+++|||+.|+.||+++|+|||||||||||++|||+..|+ +|.|.+||. +.+.... .|.||||+|+..+|
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF 89 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALF 89 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhc
Confidence 3456899999999999999999999999999999999999998 999999999 5555333 48899999999999
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
++|||.+||.|+.+++.. .|++ .+.+..++++|+.+.|++.++...-.
T Consensus 90 ~HmtVa~NIAFGl~~~~~-------------------~p~~-------------~~~r~rv~elL~lvqL~~la~ryP~Q 137 (345)
T COG1118 90 PHMTVADNIAFGLKVRKE-------------------RPSE-------------AEIRARVEELLRLVQLEGLADRYPAQ 137 (345)
T ss_pred ccchHHhhhhhccccccc-------------------CCCh-------------hhHHHHHHHHHHHhcccchhhcCchh
Confidence 999999999999876511 0110 11233567789999999999888866
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
|||||||||++||||+..|++|+||||+++||.+.+.++.+.|+++.+..+.|++.+.|. ..|++++||+|++|
T Consensus 138 -----LSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD-~eea~~ladrvvvl 211 (345)
T COG1118 138 -----LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHD-QEEALELADRVVVL 211 (345)
T ss_pred -----cChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCC-HHHHHhhcceEEEe
Confidence 999999999999999999999999999999999999999999999988878888877655 56999999999999
Q ss_pred cCCeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHh
Q 000753 418 SEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQE 454 (1302)
Q Consensus 418 ~~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~e 454 (1302)
++|+|...||++|+.+ .|...-++.|+-+
T Consensus 212 ~~G~Ieqvg~p~ev~~--------~P~s~fV~~f~G~ 240 (345)
T COG1118 212 NQGRIEQVGPPDEVYD--------HPASRFVARFLGE 240 (345)
T ss_pred cCCeeeeeCCHHHHhc--------CCCccceeccccc
Confidence 9999999999999843 3555445555443
No 66
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=6e-40 Score=331.79 Aligned_cols=212 Identities=28% Similarity=0.383 Sum_probs=180.9
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.|+||+-.|+ +.+.+|+||||+|++||++-|+|||||||||||++|.+... +..|.|.++|+++.
T Consensus 2 I~f~~V~k~Y~------------~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYP------------GGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcC------------CCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 46777764443 12569999999999999999999999999999999999655 34799999999864
Q ss_pred h------hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000753 935 Q------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1302)
Q Consensus 935 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1302)
. .-+||.||+|+||..+.+..||+||+.|...... .+..+.++++.++|+.+||.+..+.. +..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 3 2367899999999999999999999999876653 34567778899999999999988776 45899
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhc-CeEEEEecCcEEE
Q 000753 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF-DELLLLKRGGRVI 1087 (1302)
Q Consensus 1009 gGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~-D~i~~l~~gG~~~ 1087 (1302)
|||+||++||||++.+|++|+.||||.+|||..+..||+++.++.+.|.|||+.||+. ++...+ -+++.|. .|+++
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~--~lv~~~~~rvl~l~-~Grl~ 216 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDL--ELVNRMRHRVLALE-DGRLV 216 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccH--HHHHhccCcEEEEe-CCEEE
Confidence 9999999999999999999999999999999999999999999998999999999985 455555 4667776 58887
Q ss_pred EecC
Q 000753 1088 YAGP 1091 (1302)
Q Consensus 1088 ~~g~ 1091 (1302)
.+..
T Consensus 217 ~d~~ 220 (223)
T COG2884 217 RDES 220 (223)
T ss_pred eccc
Confidence 7654
No 67
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-39 Score=352.49 Aligned_cols=207 Identities=28% Similarity=0.444 Sum_probs=176.3
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccC---CCCCCCCC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQH---DLHHGEMT 261 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~---d~~~~~lT 261 (1302)
++|+|||+.+++|++++|+||||||||||+|+|.|.++|. +|+|.++|.+..+...+..||||||. |+-|| +|
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP-~t 93 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFP-IT 93 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCC-cC
Confidence 4999999999999999999999999999999999999997 99999999988776666789999995 45565 79
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
|+|.+..+.--+. ..++ ... .+....++++|+.+|+.+.+|..+|+
T Consensus 94 V~d~V~~g~~~~~--g~~~---~~~-------------------------~~d~~~v~~aL~~Vgm~~~~~r~i~~---- 139 (254)
T COG1121 94 VKDVVLLGRYGKK--GWFR---RLN-------------------------KKDKEKVDEALERVGMEDLRDRQIGE---- 139 (254)
T ss_pred HHHHHHccCcccc--cccc---ccc-------------------------HHHHHHHHHHHHHcCchhhhCCcccc----
Confidence 9999987622110 0000 000 11234578899999999999999998
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
|||||+|||-|||||+.+|++|+|||||+|+|+.++..|.+.|+++.++ |+|++++.|. ...+.++||+|+.|+ ++
T Consensus 140 -LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e-g~tIl~vtHD-L~~v~~~~D~vi~Ln-~~ 215 (254)
T COG1121 140 -LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE-GKTVLMVTHD-LGLVMAYFDRVICLN-RH 215 (254)
T ss_pred -cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC-CCEEEEEeCC-cHHhHhhCCEEEEEc-Ce
Confidence 9999999999999999999999999999999999999999999999987 8888887655 568999999999995 67
Q ss_pred EEEEcChhHHHH
Q 000753 422 IVYQGPRDNVLE 433 (1302)
Q Consensus 422 iv~~G~~~~~~~ 433 (1302)
+++.|+++++..
T Consensus 216 ~~~~G~~~~~~~ 227 (254)
T COG1121 216 LIASGPPEEVLT 227 (254)
T ss_pred eEeccChhhccC
Confidence 889999988753
No 68
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-40 Score=374.17 Aligned_cols=201 Identities=28% Similarity=0.415 Sum_probs=183.9
Q ss_pred eecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh-hhhcceeEEeccCCCCCCCCCHHHH
Q 000753 882 LLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVYES 960 (1302)
Q Consensus 882 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~ 960 (1302)
+|+|||++|++||+++|+|||||||||||++|||... +.+|+|.|+|.+.+. ...+|.+|+|+|+..+||+|||+||
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~N 95 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYEN 95 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHHH
Confidence 9999999999999999999999999999999999876 458999999998866 4567889999999999999999999
Q ss_pred HHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHH
Q 000753 961 LLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1040 (1302)
Q Consensus 961 l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~ 1040 (1302)
+.|+.+++. .++++.+++|.++.+.++|.++.|+. +++|||||||||+|||||+++|++++||||+|+||+.
T Consensus 96 iaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~-----P~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~ 167 (338)
T COG3839 96 IAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRK-----PLQLSGGQRQRVALARALVRKPKVFLLDEPLSNLDAK 167 (338)
T ss_pred hhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcC-----cccCChhhHHHHHHHHHHhcCCCEEEecCchhHhhHH
Confidence 999987763 45677788899999999999999998 4589999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCc
Q 000753 1041 AAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1302)
Q Consensus 1041 ~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~ 1094 (1302)
.+..+...|+++.+ -|.|+|.+|||. .|...++|++++|+ +|++...|++.+
T Consensus 168 lR~~mr~ei~~lh~~l~~T~IYVTHDq-~EAmtladri~Vm~-~G~i~Q~g~p~e 220 (338)
T COG3839 168 LRVLMRSEIKKLHERLGTTTIYVTHDQ-VEAMTLADRIVVMN-DGRIQQVGTPLE 220 (338)
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEcCCH-HHHHhhCCEEEEEe-CCeeeecCChHH
Confidence 99999999999865 489999999997 48889999999998 589999998754
No 69
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.2e-39 Score=342.70 Aligned_cols=210 Identities=24% Similarity=0.389 Sum_probs=182.3
Q ss_pred ccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCCC
Q 000753 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDL 255 (1302)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~ 255 (1302)
..+.||+|||+.|++||+++|+|||||||||||++|.|+++|+ +|+|.+.|+++.... .++.+|+++|+-.
T Consensus 19 G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gA 95 (263)
T COG1127 19 GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGA 95 (263)
T ss_pred CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccc
Confidence 4567999999999999999999999999999999999999998 999999999986654 2478999999999
Q ss_pred CCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccc-cccc
Q 000753 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDIC-ADTM 334 (1302)
Q Consensus 256 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~-~dt~ 334 (1302)
+|..+||+||+.|..+-.. + .|+..+ +..+..-|+..||... +|..
T Consensus 96 LFssltV~eNVafplre~~---------~----------lp~~~i--------------~~lv~~KL~~VGL~~~~~~~~ 142 (263)
T COG1127 96 LFSSLTVFENVAFPLREHT---------K----------LPESLI--------------RELVLMKLELVGLRGAAADLY 142 (263)
T ss_pred cccccchhHhhheehHhhc---------c----------CCHHHH--------------HHHHHHHHHhcCCChhhhhhC
Confidence 9999999999999654221 1 111111 2234456889999876 7777
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeE
Q 000753 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1302)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~i 414 (1302)
..+ ||||++||+++|||++.+|+++|+||||+||||.++..+.++++++.+.++.|++++.|+ .++++..+|+|
T Consensus 143 PsE-----LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHD-l~s~~~i~Drv 216 (263)
T COG1127 143 PSE-----LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHD-LDSLLTIADRV 216 (263)
T ss_pred chh-----hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECC-hHHHHhhhceE
Confidence 776 999999999999999999999999999999999999999999999999999998887765 56999999999
Q ss_pred EEecCCeEEEEcChhHHHH
Q 000753 415 ILLSEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 415 ilL~~G~iv~~G~~~~~~~ 433 (1302)
++|.+|+|+.+|+++++.+
T Consensus 217 ~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 217 AVLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEEeCCEEEEeCCHHHHHh
Confidence 9999999999999999864
No 70
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.5e-40 Score=337.35 Aligned_cols=218 Identities=24% Similarity=0.341 Sum_probs=185.0
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCC---CCCceeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGR---KTGGYIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~---~~~g~~~G~i~i~g 930 (1302)
.++++|++.++ +.+++|+|||+.|++++++||||||||||||||++|.+. .++-.++|+|.++|
T Consensus 7 ~~~~~~l~~yY-------------g~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYY-------------GDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEE-------------CchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 46677777654 457899999999999999999999999999999999983 23346789999999
Q ss_pred ccCC-----hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000753 931 YPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1302)
Q Consensus 931 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1302)
.++. ...+|+.+|.|+|.|.-|| +|++||+.|+.++....+ ++.++.|++.|+...|++-........ ..
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s-a~ 148 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS-AL 148 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC-cc
Confidence 8753 3467899999999999999 999999999988765433 667788999999999976433332222 34
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000753 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1302)
Q Consensus 1006 ~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~ 1085 (1302)
+|||||+|||||||||+.+|+||+||||||+|||.+...|-++|.+++ +.-|||++||.+. ......|+...+.. |+
T Consensus 149 ~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G~ 225 (253)
T COG1117 149 GLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-GE 225 (253)
T ss_pred CCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-cE
Confidence 799999999999999999999999999999999999999999999997 5799999999986 67778899999985 79
Q ss_pred EEEecCC
Q 000753 1086 VIYAGPL 1092 (1302)
Q Consensus 1086 ~~~~g~~ 1092 (1302)
+++.|+.
T Consensus 226 LvE~g~T 232 (253)
T COG1117 226 LVEFGPT 232 (253)
T ss_pred EEEEcCH
Confidence 9999985
No 71
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=348.12 Aligned_cols=194 Identities=26% Similarity=0.361 Sum_probs=172.0
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCCCHH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVr 263 (1302)
..+|+|+|++|.+||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++. .+...++||+|++.++|.+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHH
Confidence 67999999999999999999999999999999999999997 999999999883 4567899999999999999999
Q ss_pred HHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCC
Q 000753 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1302)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 343 (1302)
||+.|+....+... . +....++..|+.+||.+..|..... |
T Consensus 91 ~NV~l~l~~~~~~~----------~------------------------e~~~~a~~~L~~VgL~~~~~~~P~q-----L 131 (248)
T COG1116 91 DNVALGLELRGKSK----------A------------------------EARERAKELLELVGLAGFEDKYPHQ-----L 131 (248)
T ss_pred hhheehhhccccch----------H------------------------hHHHHHHHHHHHcCCcchhhcCccc-----c
Confidence 99999877654210 0 1122467789999999999999877 9
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC--Ce
Q 000753 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE--GQ 421 (1302)
Q Consensus 344 SGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~--G~ 421 (1302)
||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.+..+.|+++++|. -.|...++|+|++|++ |+
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHd-i~EAv~LsdRivvl~~~P~~ 210 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHD-VDEAVYLADRVVVLSNRPGR 210 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCC-HHHHHhhhCEEEEecCCCcc
Confidence 99999999999999999999999999999999999999999999988878888887655 5688899999999998 44
Q ss_pred E
Q 000753 422 I 422 (1302)
Q Consensus 422 i 422 (1302)
|
T Consensus 211 i 211 (248)
T COG1116 211 I 211 (248)
T ss_pred e
Confidence 4
No 72
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-39 Score=340.75 Aligned_cols=217 Identities=26% Similarity=0.355 Sum_probs=185.0
Q ss_pred ccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCCC
Q 000753 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDL 255 (1302)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~ 255 (1302)
.++++|+|||+.|++||+++|+|||||||||||++|.|..+++ +|+|.+||.++.... .++.+||++|+..
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~n 91 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFN 91 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCC
Confidence 4567999999999999999999999999999999999999987 999999998876553 2578999999999
Q ss_pred CCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccc
Q 000753 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1302)
Q Consensus 256 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1302)
+.+.+||.+|+..+..-+ .+.++. -.++.+..| +..+-..|+.+|+.+.+-+..
T Consensus 92 Lv~r~sv~~NVl~grl~~--~s~~~s---------lfglfsk~d---------------k~~Al~aLervgi~~~A~qra 145 (258)
T COG3638 92 LVPRLSVLENVLLGRLGY--TSTWRS---------LFGLFSKED---------------KAQALDALERVGILDKAYQRA 145 (258)
T ss_pred cccccHHHHHHHhhhccc--chHHHH---------HhCCCCHHH---------------HHHHHHHHHHcCcHHHHHHHh
Confidence 999999999998864321 111111 112222222 223345789999999999988
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEE
Q 000753 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1302)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ii 415 (1302)
++ |||||+|||+|||||+.+|+++|-|||+++|||.++.++++.|+++++..|.|+|+.+||- .-+.++||||+
T Consensus 146 ~~-----LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~v-dlA~~Y~~Rii 219 (258)
T COG3638 146 ST-----LSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQV-DLAKKYADRII 219 (258)
T ss_pred cc-----CCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechH-HHHHHHHhhhe
Confidence 87 9999999999999999999999999999999999999999999999999899999998875 46789999999
Q ss_pred EecCCeEEEEcChhHHHH
Q 000753 416 LLSEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 416 lL~~G~iv~~G~~~~~~~ 433 (1302)
-|++|+|+|+||++++.+
T Consensus 220 gl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 220 GLKAGRIVFDGPASELTD 237 (258)
T ss_pred EecCCcEEEeCChhhhhH
Confidence 999999999999998754
No 73
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.6e-40 Score=372.79 Aligned_cols=207 Identities=27% Similarity=0.387 Sum_probs=185.4
Q ss_pred cccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh-hhhcceeEEeccCCCCCCCC
Q 000753 877 EDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYV 955 (1302)
Q Consensus 877 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~l 955 (1302)
+++..+|+|||++|++||+++|+|||||||||||++|||... +.+|+|.++|.++.. ...+|.+|+|+|+..+||+|
T Consensus 15 yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHl 92 (352)
T COG3842 15 FGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDITDVPPEKRPIGMVFQSYALFPHM 92 (352)
T ss_pred cCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhhcccceeecCcccCCCC
Confidence 446789999999999999999999999999999999999876 358999999999865 34578899999999999999
Q ss_pred CHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCC
Q 000753 956 TVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1035 (1302)
Q Consensus 956 Tv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTs 1035 (1302)
||+||+.|+.+++. ...+++.+++++++++.++|.++.++. +.+|||||||||+|||||+.+|++|+||||.|
T Consensus 93 tV~~NVafGLk~~~--~~~~~~i~~rv~e~L~lV~L~~~~~R~-----p~qLSGGQqQRVALARAL~~~P~vLLLDEPlS 165 (352)
T COG3842 93 TVEENVAFGLKVRK--KLKKAEIKARVEEALELVGLEGFADRK-----PHQLSGGQQQRVALARALVPEPKVLLLDEPLS 165 (352)
T ss_pred cHHHHhhhhhhhcC--CCCHHHHHHHHHHHHHHcCchhhhhhC-----hhhhChHHHHHHHHHHHhhcCcchhhhcCccc
Confidence 99999999987442 334566778899999999999999887 45899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCc
Q 000753 1036 GLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1302)
Q Consensus 1036 gLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~ 1094 (1302)
+||..-+..++..++++.+ .|.|.|++|||.. +...++|++.+|++ |++.-.|++.+
T Consensus 166 aLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gtP~e 223 (352)
T COG3842 166 ALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGTPEE 223 (352)
T ss_pred chhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCCHHH
Confidence 9999999999999999864 5999999999975 78889999999985 89999998754
No 74
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.7e-40 Score=333.04 Aligned_cols=209 Identities=31% Similarity=0.375 Sum_probs=184.0
Q ss_pred cccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC--CccceEEEEccCCCCCC
Q 000753 181 KRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF--VPQRTCAYISQHDLHHG 258 (1302)
Q Consensus 181 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~ 258 (1302)
+...++++||||.++.|++++|+|||||||||+|++|++++.|+ +|+|+++|.+.... ..++.+|.++.+..++.
T Consensus 12 ~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~ 88 (245)
T COG4555 12 GSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYA 88 (245)
T ss_pred cCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhh
Confidence 33455899999999999999999999999999999999999998 99999999887443 34688999998889999
Q ss_pred CCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCc
Q 000753 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1302)
Q Consensus 259 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 338 (1302)
.||++|||.|.+++.+. ++. +.+.+++.+.+.|+|.+|.|+.+|+
T Consensus 89 RlT~rEnl~~Fa~L~~l----------~~~------------------------~~kari~~l~k~l~l~~~~~rRv~~- 133 (245)
T COG4555 89 RLTARENLKYFARLNGL----------SRK------------------------EIKARIAELSKRLQLLEYLDRRVGE- 133 (245)
T ss_pred hhhHHHHHHHHHHHhhh----------hhh------------------------HHHHHHHHHHHHhChHHHHHHHHhh-
Confidence 99999999998876542 221 1233577899999999999999998
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEec
Q 000753 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1302)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~ 418 (1302)
+|-|+||||+|||||+.+|++++|||||||||..++..+.+.++++.. .|+++|.+. |..+|+..+||+|++|+
T Consensus 134 ----~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~-egr~viFSS-H~m~EvealCDrvivlh 207 (245)
T COG4555 134 ----FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN-EGRAVIFSS-HIMQEVEALCDRVIVLH 207 (245)
T ss_pred ----hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc-CCcEEEEec-ccHHHHHHhhheEEEEe
Confidence 999999999999999999999999999999999999999999999875 377887775 56789999999999999
Q ss_pred CCeEEEEcChhHHHH
Q 000753 419 EGQIVYQGPRDNVLE 433 (1302)
Q Consensus 419 ~G~iv~~G~~~~~~~ 433 (1302)
+|++++.|+.+++..
T Consensus 208 ~Gevv~~gs~~~l~~ 222 (245)
T COG4555 208 KGEVVLEGSIEALDA 222 (245)
T ss_pred cCcEEEcCCHHHHHH
Confidence 999999999988754
No 75
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=6.4e-39 Score=369.67 Aligned_cols=214 Identities=28% Similarity=0.396 Sum_probs=184.8
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|++..+ +++.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~-------------~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRY-------------GDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEE-------------CCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEec
Confidence 46778877554 23569999999999999999999999999999999999765 3579999999986
Q ss_pred Ch--hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000753 934 NQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1302)
Q Consensus 934 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1302)
.. ...++.+|||+|++.+++.+||+||+.|.+.++. ....+..+.++++++.++|.+..++.+ ++||+||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHH
Confidence 43 3456789999999999999999999998765532 223344456889999999988888774 4799999
Q ss_pred HHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000753 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1302)
Q Consensus 1012 rqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~ 1091 (1302)
|||++||+||+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999877999999999986 67788999999985 79999998
Q ss_pred C
Q 000753 1092 L 1092 (1302)
Q Consensus 1092 ~ 1092 (1302)
+
T Consensus 222 ~ 222 (306)
T PRK13537 222 P 222 (306)
T ss_pred H
Confidence 5
No 76
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=9e-39 Score=342.66 Aligned_cols=195 Identities=26% Similarity=0.405 Sum_probs=171.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-------cceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 256 (1302)
.++|++||+.|++||+++|+|||||||||||++|+|...|+ +|.|.++|.++..... ++.+|||+|+..+
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nL 94 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNL 94 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCC
Confidence 68999999999999999999999999999999999999997 9999999988876542 3679999999999
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccccc-ccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICAD-TMV 335 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d-t~v 335 (1302)
+|++||+||+.+.....+.... ......+.+++.+||++..+ ..+
T Consensus 95 l~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~~~~p 140 (226)
T COG1136 95 LPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLLKKKP 140 (226)
T ss_pred CCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhccCCc
Confidence 9999999999986654432210 01223567899999997766 778
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEE
Q 000753 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1302)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ii 415 (1302)
.+ |||||||||+|||||+.+|++++.||||.+||+.++..|++.++++++..|+|+|+++|.| ++...||+++
T Consensus 141 ~e-----LSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i 213 (226)
T COG1136 141 SE-----LSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVI 213 (226)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEE
Confidence 77 9999999999999999999999999999999999999999999999988888999998765 6888999999
Q ss_pred EecCCeE
Q 000753 416 LLSEGQI 422 (1302)
Q Consensus 416 lL~~G~i 422 (1302)
.|.+|++
T Consensus 214 ~l~dG~~ 220 (226)
T COG1136 214 ELKDGKI 220 (226)
T ss_pred EEeCCee
Confidence 9999994
No 77
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1e-38 Score=380.89 Aligned_cols=214 Identities=24% Similarity=0.429 Sum_probs=181.9
Q ss_pred CCCcccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCC
Q 000753 178 PSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHD 254 (1302)
Q Consensus 178 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d 254 (1302)
++.+++.+||||+|++|+|||.|||+||||+||||+.++|..+++|+ +|+|++||+|+.+.++ ++.||+|.|+|
T Consensus 475 YP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEP 551 (716)
T KOG0058|consen 475 YPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEP 551 (716)
T ss_pred cCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccc
Confidence 44556788999999999999999999999999999999999999998 9999999999988765 58999999999
Q ss_pred CCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccccccc
Q 000753 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTM 334 (1302)
Q Consensus 255 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 334 (1302)
.+|.. ||+|||.|+.. ..+.++.+.++..+. ..+. +.++++.+||.
T Consensus 552 vLFs~-sI~eNI~YG~~-------------------------~~t~e~i~~AAk~AN-----ah~F---I~~~p~gY~T~ 597 (716)
T KOG0058|consen 552 VLFSG-SIRENIAYGLD-------------------------NATDEEIEAAAKMAN-----AHEF---ITNFPDGYNTV 597 (716)
T ss_pred eeecc-cHHHHHhcCCC-------------------------CCCHHHHHHHHHHhC-----hHHH---HHhCccccccc
Confidence 99975 99999999743 122233333333322 1233 34689999999
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeE
Q 000753 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1302)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~i 414 (1302)
||+ .+..||||||||++|||||+.+|.||+|||.||+||+.+...+.+.|.+..+ ++|+++.-|. ..+.+.+|+|
T Consensus 598 VGE-kG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlvIAHR--LSTV~~Ad~I 672 (716)
T KOG0058|consen 598 VGE-KGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLVIAHR--LSTVRHADQI 672 (716)
T ss_pred cCC-ccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEEEehh--hhHhhhccEE
Confidence 997 3345999999999999999999999999999999999999999999998876 5788776554 5788999999
Q ss_pred EEecCCeEEEEcChhHHHH
Q 000753 415 ILLSEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 415 ilL~~G~iv~~G~~~~~~~ 433 (1302)
+++++|++++.|+++|+++
T Consensus 673 vvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 673 VVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred EEEcCCeEEecccHHHHhh
Confidence 9999999999999999875
No 78
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.6e-38 Score=367.35 Aligned_cols=218 Identities=24% Similarity=0.326 Sum_probs=184.5
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
++++|++..++.. ...+.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 5677877655310 112469999999999999999999999999999999999766 35799999998764
Q ss_pred h---h---hhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000753 935 Q---E---TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1302)
Q Consensus 935 ~---~---~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1302)
. . ..++.+||++|+..+++..||+||+.|..... ..+.++..+++.++++.++|.+..|... ..||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYP-----SNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 3 1 24668999999999999999999999875433 2334455667899999999998888774 5799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEE
Q 000753 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1302)
Q Consensus 1009 gGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~ 1087 (1302)
||||||++|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 999999999976 56688999999985 8999
Q ss_pred EecCCC
Q 000753 1088 YAGPLG 1093 (1302)
Q Consensus 1088 ~~g~~~ 1093 (1302)
+.|+..
T Consensus 221 ~~g~~~ 226 (343)
T TIGR02314 221 EQGTVS 226 (343)
T ss_pred EEcCHH
Confidence 999853
No 79
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.1e-39 Score=329.84 Aligned_cols=210 Identities=26% Similarity=0.361 Sum_probs=185.5
Q ss_pred ccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChhh----hcceeEEeccCC
Q 000753 874 GVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQET----FARVSGYCEQND 949 (1302)
Q Consensus 874 ~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~----~~~~~gyv~Q~~ 949 (1302)
.+++++++++++||+.+++||++||+|||||||||.+.++.|...+ .+|.|.+||.+++... .+..+||+||++
T Consensus 11 ~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~--d~G~i~ld~~diT~lPm~~RArlGigYLpQE~ 88 (243)
T COG1137 11 AKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRP--DSGKILLDDEDITKLPMHKRARLGIGYLPQEA 88 (243)
T ss_pred hHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEec--CCceEEECCcccccCChHHHhhcCcccccccc
Confidence 3466788999999999999999999999999999999999997663 4799999999876532 334699999999
Q ss_pred CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcc
Q 000753 950 IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1029 (1302)
Q Consensus 950 ~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~ill 1029 (1302)
..|..+||+||+......+.. +....+++..++++|+.+++.++++... ..||||||+|+.|||||+.+|+.++
T Consensus 89 SIFr~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiL 162 (243)
T COG1137 89 SIFRKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFIL 162 (243)
T ss_pred hHhhcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEE
Confidence 999999999999877666532 2233456667889999999999999874 3699999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1030 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
||||++|+||.+...|+++++.+++.|..|++|-|+.. |....|||.+++.+ |++...|++.
T Consensus 163 LDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 163 LDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred ecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 99999999999999999999999999999999999986 88999999999986 8999999874
No 80
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.4e-35 Score=397.28 Aligned_cols=216 Identities=22% Similarity=0.365 Sum_probs=184.7
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1302)
..++++|++..++ .+++.+|+|||+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~-----------~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFE-----------PSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEec-----------CCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 4678888776542 123579999999999999999999999999999999999765 348999999988
Q ss_pred CCh--hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000753 933 KNQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1302)
Q Consensus 933 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1302)
+.. ...++.+|||+|++.+++.+||+|++.|.+.++. ...++.++.++++++.++|.+..++.+ ++||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 643 2356779999999999999999999999876542 223344567899999999998888774 479999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1011 qrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
|||||+||+||+.+|+||||||||+|||+.+++.++++|++++ +|+|||++||+++ ++...+|++++|++ |++++.|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999995 5999999999986 56678999999985 8999988
Q ss_pred CC
Q 000753 1091 PL 1092 (1302)
Q Consensus 1091 ~~ 1092 (1302)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 75
No 81
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-38 Score=351.61 Aligned_cols=202 Identities=26% Similarity=0.381 Sum_probs=172.8
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh------hhhcceeEEeccCCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHSP 953 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 953 (1302)
+.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ..+++.+||++|++.+++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFD 90 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccChhhHHHHhcceEEEccCcccCC
Confidence 469999999999999999999999999999999999765 347999999987532 234667999999999999
Q ss_pred CCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCC
Q 000753 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1302)
Q Consensus 954 ~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEP 1033 (1302)
.+||+||+.+...... ....++..+.+.++++.++|.+..++.+ ..||||||||++||+||+.+|+||+||||
T Consensus 91 ~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~ia~al~~~p~llllDEP 163 (235)
T cd03261 91 SLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSGGMKKRVALARALALDPELLLYDEP 163 (235)
T ss_pred CCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 9999999988643221 1233444566889999999987776663 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1034 TSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
|+|||+.++..+++.|+++++ .|+|||++||+++ ++...||++++|++ |++++.|+.
T Consensus 164 t~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 221 (235)
T cd03261 164 TAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVAEGTP 221 (235)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEEecCH
Confidence 999999999999999999976 4899999999986 56778999999985 789988874
No 82
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.1e-38 Score=316.34 Aligned_cols=201 Identities=24% Similarity=0.397 Sum_probs=179.0
Q ss_pred ceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-cceEEEEccCCCCCCCCCHHHHHH
Q 000753 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTVRETLD 267 (1302)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVrE~l~ 267 (1302)
.+++.|++||++||+|||||||||||+.|+|+..|. +|+|.+||++.+...| +|-++.++|+..+|.++||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 468899999999999999999999999999999987 9999999999987665 578999999999999999999998
Q ss_pred hhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCChHH
Q 000753 268 FSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQ 347 (1302)
Q Consensus 268 f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGq 347 (1302)
++.. ++-+. .. +....++.++...||..+.+.+.+. |||||
T Consensus 94 LGl~---P~LkL------~a-------------------------~~r~~v~~aa~~vGl~~~~~RLP~~-----LSGGq 134 (231)
T COG3840 94 LGLS---PGLKL------NA-------------------------EQREKVEAAAAQVGLAGFLKRLPGE-----LSGGQ 134 (231)
T ss_pred ccCC---ccccc------CH-------------------------HHHHHHHHHHHHhChhhHhhhCccc-----cCchH
Confidence 8643 11111 00 1123467789999999999999988 99999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEEEEcC
Q 000753 348 KKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGP 427 (1302)
Q Consensus 348 kqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv~~G~ 427 (1302)
||||++||+|+.+-+|++||||+|+|||.-+.+....+.+++.+.+.|++++.|||. ++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999999999999999999985 7889999999999999999999
Q ss_pred hhHHH
Q 000753 428 RDNVL 432 (1302)
Q Consensus 428 ~~~~~ 432 (1302)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 88764
No 83
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.6e-37 Score=360.89 Aligned_cols=206 Identities=25% Similarity=0.341 Sum_probs=179.1
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1302)
+++|+|||++|++|++++|+||||||||||+++|+|..+|+ +|+|.++|+++.... .++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 56999999999999999999999999999999999999987 999999999886543 246799999999999
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
+.+||+||+.|.....+.. + . +....+.++++.+||++..|..+++
T Consensus 95 ~~~tv~eni~~~~~~~~~~----------~----------~--------------~~~~~v~e~l~~vgL~~~~~~~~~~ 140 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTP----------K----------D--------------EIKRKVTELLALVGLGDKHDSYPSN 140 (343)
T ss_pred ccCcHHHHHHHHHHHcCCC----------H----------H--------------HHHHHHHHHHHHcCCchhhhCChhh
Confidence 9999999999865432210 0 0 0112356789999999988888876
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
|||||||||+|||||+.+|++|+|||||||||+.++..+.+.|+++.+..+.|+|++.|+. ..+.++||+|++|
T Consensus 141 -----LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~-~~v~~~~d~v~vl 214 (343)
T TIGR02314 141 -----LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEM-DVVKRICDCVAVI 214 (343)
T ss_pred -----CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999999877788888887764 5788999999999
Q ss_pred cCCeEEEEcChhHHH
Q 000753 418 SEGQIVYQGPRDNVL 432 (1302)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1302)
++|++++.|+.+++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 84
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=6.9e-38 Score=366.50 Aligned_cols=215 Identities=26% Similarity=0.373 Sum_probs=186.3
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|++..+ +.+.+|+|||+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRF-------------GAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEe-------------CCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 36777777544 23569999999999999999999999999999999999766 3589999999876
Q ss_pred Ch-hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000753 934 NQ-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1302)
Q Consensus 934 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1302)
.. ...+|.+|||+|+..++|.+||+||+.|+...+ ..+..+.++.++++++.++|.++.++. +..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~-----~~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKY-----PGQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCC-----hhhCCHHHH
Confidence 43 234678999999999999999999999986543 233455667899999999999988876 457999999
Q ss_pred HHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000753 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1302)
Q Consensus 1013 qRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~ 1091 (1302)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||+++ +....+|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998764 899999999986 67889999999985 79999998
Q ss_pred CC
Q 000753 1092 LG 1093 (1302)
Q Consensus 1092 ~~ 1093 (1302)
+.
T Consensus 219 ~~ 220 (353)
T TIGR03265 219 PQ 220 (353)
T ss_pred HH
Confidence 64
No 85
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-38 Score=366.21 Aligned_cols=206 Identities=26% Similarity=0.369 Sum_probs=180.6
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-cceEEEEccCCCCCCCCCH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|..+|+ +|+|.++|.++....+ ++.++||+|++.+||++||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 46999999999999999999999999999999999999987 9999999998866443 4789999999999999999
Q ss_pred HHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCC
Q 000753 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1302)
Q Consensus 263 rE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1302)
+||+.|+.+..+.. +. +....++.+++.+||++..+..+++
T Consensus 94 ~eNi~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~~----- 134 (356)
T PRK11650 94 RENMAYGLKIRGMP----------KA------------------------EIEERVAEAARILELEPLLDRKPRE----- 134 (356)
T ss_pred HHHHHhHHhhcCCC----------HH------------------------HHHHHHHHHHHHcCChhHhhCChhh-----
Confidence 99999975432110 00 0112356789999999999988876
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeE
Q 000753 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1302)
Q Consensus 343 LSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~i 422 (1302)
|||||||||+|||||+.+|++|+|||||++||+.++.++.+.|+++.+..+.|+|++.|++ .++..++|+|++|++|++
T Consensus 135 LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~-~ea~~l~D~i~vl~~G~i 213 (356)
T PRK11650 135 LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQ-VEAMTLADRVVVMNGGVA 213 (356)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEeCCEE
Confidence 9999999999999999999999999999999999999999999999876688888887765 589999999999999999
Q ss_pred EEEcChhHHH
Q 000753 423 VYQGPRDNVL 432 (1302)
Q Consensus 423 v~~G~~~~~~ 432 (1302)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (356)
T PRK11650 214 EQIGTPVEVY 223 (356)
T ss_pred EEECCHHHHH
Confidence 9999998874
No 86
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=5.7e-38 Score=362.17 Aligned_cols=202 Identities=27% Similarity=0.397 Sum_probs=176.3
Q ss_pred cceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh--hhhcceeEEeccCCCCCCCCC
Q 000753 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVT 956 (1302)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 956 (1302)
++.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 4579999999999999999999999999999999999765 347999999987643 234567999999999999999
Q ss_pred HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 000753 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1036 (1302)
Q Consensus 957 v~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsg 1036 (1302)
|+||+.+.+.++. ....+..+.++++++.++|.+..++.+ +.||||||||++||+||+.+|++|||||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998765542 223344556899999999988777764 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1037 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1037 LD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
||+.++..+++.|++++++|+|||++||+++ ++...||++++|++ |++++.|++
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999877999999999986 67778999999985 899998875
No 87
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.4e-37 Score=364.60 Aligned_cols=223 Identities=26% Similarity=0.430 Sum_probs=184.0
Q ss_pred cccccc-CCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeE
Q 000753 845 GMILPF-QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIE 923 (1302)
Q Consensus 845 ~~~~~~-~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~ 923 (1302)
|...|. -...++|+||+|.|+..+ +..+|+|+||+|+|||.+|||||||+||||+.++|....+ +.+
T Consensus 455 G~~~p~~~~G~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--Pts 522 (716)
T KOG0058|consen 455 GTLAPDHLQGVIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTS 522 (716)
T ss_pred CccccccccceEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCC
Confidence 444442 345799999999998654 4679999999999999999999999999999999998765 458
Q ss_pred EEEEEcCccCC---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHH-----HHHHHHHHHcCCcccc
Q 000753 924 GDIKISGYPKN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRK-----MFVDEVMELVELKSLN 995 (1302)
Q Consensus 924 G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~-----~~v~~~l~~l~L~~~~ 995 (1302)
|.|.+||+|+. ...+++.+|+|.|+|.+|. -||+||+.|+.. +.+.++.. +.+.+.+. ++.+-.
T Consensus 523 G~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI~--~~p~gY 594 (716)
T KOG0058|consen 523 GRILLDGVPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFIT--NFPDGY 594 (716)
T ss_pred CeEEECCeehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHHH--hCcccc
Confidence 99999999864 4567899999999999985 599999999753 22333222 11222222 455567
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcC
Q 000753 996 DSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1075 (1302)
Q Consensus 996 ~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D 1075 (1302)
|+.+|..|. .||||||||++|||||++||+||||||+||+||+++...|++.|.++.+ ++|||+++|+++ ..+.+|
T Consensus 595 ~T~VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad 670 (716)
T KOG0058|consen 595 NTVVGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHAD 670 (716)
T ss_pred ccccCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--Hhhhcc
Confidence 888887654 7999999999999999999999999999999999999999999999874 699999999975 678999
Q ss_pred eEEEEecCcEEEEecCC
Q 000753 1076 ELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1076 ~i~~l~~gG~~~~~g~~ 1092 (1302)
+|+++++ |++++.|..
T Consensus 671 ~Ivvi~~-G~V~E~G~h 686 (716)
T KOG0058|consen 671 QIVVIDK-GRVVEMGTH 686 (716)
T ss_pred EEEEEcC-CeEEecccH
Confidence 9999985 899999964
No 88
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-38 Score=368.12 Aligned_cols=215 Identities=25% Similarity=0.343 Sum_probs=185.0
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|++..++ +++.+|+|||+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~ 69 (356)
T PRK11650 4 LKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVN 69 (356)
T ss_pred EEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECC
Confidence 56777765441 23569999999999999999999999999999999999766 35899999998764
Q ss_pred h-hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000753 935 Q-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1302)
Q Consensus 935 ~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1302)
. ...++.+|||+|++.++|.+||+||+.|....+ ..+..+..+.++++++.++|.+..++.+ ..|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~Q 141 (356)
T PRK11650 70 ELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQ 141 (356)
T ss_pred CCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHH
Confidence 3 223578999999999999999999999986533 2334455667899999999998888874 579999999
Q ss_pred HHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1014 Rl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++...+|++++|++ |+++..|++
T Consensus 142 RvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~~ 219 (356)
T PRK11650 142 RVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGTP 219 (356)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999999999999999999999999998765 899999999986 68889999999985 899999986
Q ss_pred C
Q 000753 1093 G 1093 (1302)
Q Consensus 1093 ~ 1093 (1302)
.
T Consensus 220 ~ 220 (356)
T PRK11650 220 V 220 (356)
T ss_pred H
Confidence 4
No 89
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-38 Score=365.01 Aligned_cols=215 Identities=25% Similarity=0.390 Sum_probs=186.4
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|++..+ +++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRF-------------GSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEE-------------CCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 46778877654 23469999999999999999999999999999999999876 3589999999876
Q ss_pred Chh-hhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000753 934 NQE-TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1302)
Q Consensus 934 ~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1302)
... ..++.+|||+|+..++|.+||+||+.|....+. ....+.++.++++++.++|.++.++. +..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~-----~~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRY-----VDQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 432 235789999999999999999999999865432 33455667899999999999888876 457999999
Q ss_pred HHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000753 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1302)
Q Consensus 1013 qRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~ 1091 (1302)
|||+|||||+.+|++|+|||||||||+.++..+.+.|+++.++ |+|+|++||+++ ++...+|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999754 899999999986 67889999999985 79999998
Q ss_pred CC
Q 000753 1092 LG 1093 (1302)
Q Consensus 1092 ~~ 1093 (1302)
+.
T Consensus 221 ~~ 222 (351)
T PRK11432 221 PQ 222 (351)
T ss_pred HH
Confidence 64
No 90
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.1e-37 Score=364.90 Aligned_cols=207 Identities=28% Similarity=0.428 Sum_probs=181.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-cceEEEEccCCCCCCCCCH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1302)
+.+|+|+|+++++|++++|+|||||||||||++|+|..+|+ +|+|.++|+++....+ +|.++||+|+..+||++||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 45899999999999999999999999999999999999987 9999999998865443 4789999999999999999
Q ss_pred HHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCC
Q 000753 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1302)
Q Consensus 263 rE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1302)
+||+.|+.+.++.. +. +....++.+++.+||++..|+.+.+
T Consensus 94 ~eNi~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~l~L~~~~~~~~~~----- 134 (353)
T TIGR03265 94 ADNIAYGLKNRGMG----------RA------------------------EVAERVAELLDLVGLPGSERKYPGQ----- 134 (353)
T ss_pred HHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCCchhhCChhh-----
Confidence 99999975432110 00 0122457789999999999988876
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeE
Q 000753 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1302)
Q Consensus 343 LSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~i 422 (1302)
|||||||||+|||||+.+|+++|||||+++||..++.++.+.|+++.+..+.|+|++.|++ .++..++|+|++|++|++
T Consensus 135 LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~-~ea~~l~d~i~vl~~G~i 213 (353)
T TIGR03265 135 LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQ-EEALSMADRIVVMNHGVI 213 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCH-HHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999877788888887766 588999999999999999
Q ss_pred EEEcChhHHHH
Q 000753 423 VYQGPRDNVLE 433 (1302)
Q Consensus 423 v~~G~~~~~~~ 433 (1302)
+++|+++++.+
T Consensus 214 ~~~g~~~~~~~ 224 (353)
T TIGR03265 214 EQVGTPQEIYR 224 (353)
T ss_pred EEEcCHHHHHh
Confidence 99999988753
No 91
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-37 Score=363.77 Aligned_cols=206 Identities=24% Similarity=0.386 Sum_probs=180.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-cceEEEEccCCCCCCCCCH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1302)
..+|+|+|+++++|++++|+|||||||||||++|+|..+|+ +|+|.++|.++....+ ++.++||+|+..+||++||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999987 9999999998876544 4789999999999999999
Q ss_pred HHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCC
Q 000753 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1302)
Q Consensus 263 rE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1302)
+||+.|+.+.++... . +....++++++.+||.+..|..+.+
T Consensus 96 ~eNi~~~l~~~~~~~----------~------------------------~~~~~v~~~l~~~gl~~~~~r~~~~----- 136 (351)
T PRK11432 96 GENVGYGLKMLGVPK----------E------------------------ERKQRVKEALELVDLAGFEDRYVDQ----- 136 (351)
T ss_pred HHHHHHHHhHcCCCH----------H------------------------HHHHHHHHHHHHcCCchhhcCChhh-----
Confidence 999999765332110 0 0122457789999999888888776
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeE
Q 000753 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1302)
Q Consensus 343 LSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~i 422 (1302)
|||||||||+|||||+.+|++||||||++|||+.++.++.+.|+++.+..+.|+|++.|++ .++..++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~-~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQ-SEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCH-HHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999876688888877665 588999999999999999
Q ss_pred EEEcChhHHH
Q 000753 423 VYQGPRDNVL 432 (1302)
Q Consensus 423 v~~G~~~~~~ 432 (1302)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 92
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-38 Score=325.08 Aligned_cols=222 Identities=24% Similarity=0.395 Sum_probs=177.3
Q ss_pred cceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCccceEEECCcccCCC-----CccceEEEEccCCC
Q 000753 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDL 255 (1302)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~ 255 (1302)
.+++|+|||+.|+++++||++|||||||||||++|....+ +..+++|+|.++|+++.+. ..|+.+|+|+|.|.
T Consensus 19 ~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPn 98 (253)
T COG1117 19 DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPN 98 (253)
T ss_pred chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCC
Confidence 3568999999999999999999999999999999988754 3567899999999988654 24689999999999
Q ss_pred CCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc-ccccc
Q 000753 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI-CADTM 334 (1302)
Q Consensus 256 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 334 (1302)
-|| +|++||+.|+.+..|... +.+.+ .++..|+.-+|.+ ..|.+
T Consensus 99 PFp-~SIydNVayG~r~~g~~~--~~lde--------------------------------iVe~sLk~AaLWdEVKDrL 143 (253)
T COG1117 99 PFP-MSIYDNVAYGLRLHGIKD--KELDE--------------------------------IVESSLKKAALWDEVKDRL 143 (253)
T ss_pred CCC-chHHHHHHHhHHhhccch--HHHHH--------------------------------HHHHHHHHhHhHHHhHHHh
Confidence 999 999999999998877543 11111 1222333333322 12222
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeE
Q 000753 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1302)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~i 414 (1302)
= +...||||||+||++|||||+-+|+|||||||||+|||.++..|.+++.++.+ +-|+|++.|. ..+..+..|+.
T Consensus 144 ~--~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~--~yTIviVTHn-mqQAaRvSD~t 218 (253)
T COG1117 144 H--KSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK--KYTIVIVTHN-MQQAARVSDYT 218 (253)
T ss_pred h--CCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh--ccEEEEEeCC-HHHHHHHhHhh
Confidence 1 22456999999999999999999999999999999999999999999999986 4577777654 56888999999
Q ss_pred EEecCCeEEEEcChhHHHHHHHhcCCCCCCCCChHHHH
Q 000753 415 ILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFL 452 (1302)
Q Consensus 415 ilL~~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl 452 (1302)
.++..|++++.|+.+++ |..|.++...||+
T Consensus 219 aFf~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 219 AFFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 99999999999999887 3457766666665
No 93
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.2e-37 Score=364.96 Aligned_cols=215 Identities=24% Similarity=0.335 Sum_probs=185.8
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeE--EEEEEcCc
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIE--GDIKISGY 931 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~--G~i~i~g~ 931 (1302)
.++++|+++.+. +..+|+|||++|++||+++|+|||||||||||++|+|...+ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 467778776542 34699999999999999999999999999999999997653 46 99999998
Q ss_pred cCCh-hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000753 932 PKNQ-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1302)
Q Consensus 932 ~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1302)
+... ...++.+|||+|++.++|.+||+||+.|....+ ..+..+.++.++++++.++|.+..++.+ .+||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 7643 224577999999999999999999999986543 2344555667899999999999888874 579999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000753 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1302)
Q Consensus 1011 qrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~ 1088 (1302)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999765 799999999986 67888999999985 89999
Q ss_pred ecCCC
Q 000753 1089 AGPLG 1093 (1302)
Q Consensus 1089 ~g~~~ 1093 (1302)
.|++.
T Consensus 220 ~g~~~ 224 (362)
T TIGR03258 220 HGEPQ 224 (362)
T ss_pred EcCHH
Confidence 99864
No 94
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=9.5e-38 Score=363.51 Aligned_cols=215 Identities=27% Similarity=0.377 Sum_probs=184.7
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|++..+ +++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 41 ~i~i~nl~k~y-------------~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~~ 105 (340)
T PRK13536 41 AIDLAGVSKSY-------------GDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVPV 105 (340)
T ss_pred eEEEEEEEEEE-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEEC
Confidence 47888877654 235699999999999999999999999999999999997663 479999999876
Q ss_pred Ch--hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000753 934 NQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1302)
Q Consensus 934 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1302)
.. ...++.+||++|++.+++.+||.||+.+.+.++. ....+..+.++++++.++|.+..++.+ ++|||||
T Consensus 106 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G~ 177 (340)
T PRK13536 106 PARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGGM 177 (340)
T ss_pred CcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHHH
Confidence 42 3456789999999999999999999987665432 223334456788999999998888774 4799999
Q ss_pred HHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000753 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1302)
Q Consensus 1012 rqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~ 1091 (1302)
|||++||+||+++|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 178 kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g~ 255 (340)
T PRK13536 178 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEGR 255 (340)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 67788999999985 79999998
Q ss_pred CC
Q 000753 1092 LG 1093 (1302)
Q Consensus 1092 ~~ 1093 (1302)
+.
T Consensus 256 ~~ 257 (340)
T PRK13536 256 PH 257 (340)
T ss_pred HH
Confidence 63
No 95
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.1e-37 Score=361.61 Aligned_cols=208 Identities=22% Similarity=0.327 Sum_probs=181.2
Q ss_pred cceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-------cceEEEEccCCC
Q 000753 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDL 255 (1302)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 255 (1302)
.+.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++.
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 456999999999999999999999999999999999999987 9999999998876543 568999999999
Q ss_pred CCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccc
Q 000753 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1302)
Q Consensus 256 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1302)
++|++||+||+.|+.+..+.. +. +....+..+++.+||++..++.+
T Consensus 82 l~~~~TV~eNi~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~vgL~~~~~~~p 127 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELLGWP----------EQ------------------------ERKEKALELLKLVGLEEYEHRYP 127 (363)
T ss_pred CCCCCCHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHhcCCchhhhCCh
Confidence 999999999999875543211 00 01123567899999998888888
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEE
Q 000753 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1302)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ii 415 (1302)
++ |||||||||+|||||+.+|+++||||||+|||+.++.++.+.++++.+..++|+|++.|+. .++..++|+|+
T Consensus 128 ~~-----LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~-~ea~~~~drI~ 201 (363)
T TIGR01186 128 DE-----LSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDL-DEAIRIGDRIV 201 (363)
T ss_pred hh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEE
Confidence 77 9999999999999999999999999999999999999999999999776678888887665 57889999999
Q ss_pred EecCCeEEEEcChhHHHH
Q 000753 416 LLSEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 416 lL~~G~iv~~G~~~~~~~ 433 (1302)
+|++|+++..|+++++..
T Consensus 202 vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 202 IMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEeCCEEEeeCCHHHHHh
Confidence 999999999999988753
No 96
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-38 Score=333.20 Aligned_cols=216 Identities=26% Similarity=0.350 Sum_probs=176.7
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
++.+|++..++... ....+|+|||++|.+||++||+|+||||||||.++|+|...+ ..|+|.++|.+..
T Consensus 4 l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~~ 72 (252)
T COG1124 4 LSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPLA 72 (252)
T ss_pred EEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCcccC
Confidence 56677665443211 112599999999999999999999999999999999997763 5899999997654
Q ss_pred hh----hhcceeEEeccCCC--CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCC
Q 000753 935 QE----TFARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGL 1007 (1302)
Q Consensus 935 ~~----~~~~~~gyv~Q~~~--~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~L 1007 (1302)
.. .+++.+.+|+||+. +.|..||++.|.-.... ...++.+ +++.++++.+||.+ ..++. +.+|
T Consensus 73 ~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~~--~~i~~~L~~VgL~~~~l~R~-----P~eL 142 (252)
T COG1124 73 PKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKSQ--QRIAELLDQVGLPPSFLDRR-----PHEL 142 (252)
T ss_pred ccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHHH--HHHHHHHHHcCCCHHHHhcC-----chhc
Confidence 32 46788999999985 78999999988655433 1222322 23899999999965 44444 5679
Q ss_pred CHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEE
Q 000753 1008 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1302)
Q Consensus 1008 SgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~ 1086 (1302)
|||||||+||||||+.+|++|+||||||+||+..++.|++++.++.+ .|.|+|++|||.+ -+...|||+++|++ |++
T Consensus 143 SGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi~Vm~~-G~i 220 (252)
T COG1124 143 SGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRIAVMDN-GQI 220 (252)
T ss_pred ChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhheeeeeC-CeE
Confidence 99999999999999999999999999999999999999999999975 4789999999986 36778999999986 899
Q ss_pred EEecCCC
Q 000753 1087 IYAGPLG 1093 (1302)
Q Consensus 1087 ~~~g~~~ 1093 (1302)
++.++..
T Consensus 221 vE~~~~~ 227 (252)
T COG1124 221 VEIGPTE 227 (252)
T ss_pred EEeechh
Confidence 9999864
No 97
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.3e-37 Score=387.69 Aligned_cols=207 Identities=29% Similarity=0.483 Sum_probs=181.4
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCCCCCC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1302)
.+|+|+|++|+|||.++|+|+||||||||+|+|+|++.|. +|+|.+||+++++..+ |+.++||+|++.+|. -|
T Consensus 487 ~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gS 562 (709)
T COG2274 487 PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFS-GS 562 (709)
T ss_pred chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhhc-Cc
Confidence 5899999999999999999999999999999999999997 9999999999987764 689999999999996 59
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
|+||+.++. |+.+.++.++++..++.. +. +..++..+||.||+ ++.
T Consensus 563 I~eNi~l~~-------------------------p~~~~e~i~~A~~~ag~~-----~f---I~~lP~gy~t~v~E-~G~ 608 (709)
T COG2274 563 IRENIALGN-------------------------PEATDEEIIEAAQLAGAH-----EF---IENLPMGYDTPVGE-GGA 608 (709)
T ss_pred HHHHHhcCC-------------------------CCCCHHHHHHHHHHhCcH-----HH---HHhccccccccccc-CCC
Confidence 999998853 223334455555554432 22 34589999999995 778
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
+||||||||++|||||+++|+||+||||||+||+.+...|.+.|.++.+ ++|+|+..|.+ .+.+.||+|++|++|+
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~~T~I~IaHRl--~ti~~adrIiVl~~Gk 684 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ--GRTVIIIAHRL--STIRSADRIIVLDQGK 684 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--CCeEEEEEccc--hHhhhccEEEEccCCc
Confidence 8999999999999999999999999999999999999999999999875 68999888876 5889999999999999
Q ss_pred EEEEcChhHHHH
Q 000753 422 IVYQGPRDNVLE 433 (1302)
Q Consensus 422 iv~~G~~~~~~~ 433 (1302)
++.+|+++|+++
T Consensus 685 iv~~gs~~ell~ 696 (709)
T COG2274 685 IVEQGSHEELLA 696 (709)
T ss_pred eeccCCHHHHHH
Confidence 999999999986
No 98
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.7e-37 Score=341.74 Aligned_cols=208 Identities=25% Similarity=0.337 Sum_probs=173.3
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
++++|+++.++. +.+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehh
Confidence 466777765421 11359999999999999999999999999999999999765 34799999998753
Q ss_pred h------hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000753 935 Q------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1302)
Q Consensus 935 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1302)
. ..+++.++|++|++.+++.+||.||+.+....+. ...+...+.++++++.++|.+..++.+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 2 1245679999999999999999999988654321 223334556889999999988777663 4799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000753 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1302)
Q Consensus 1009 gGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~ 1085 (1302)
||||||++|||||+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ .+...||++++|.+ |+
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 99999999999999999999999999999999999999999999777999999999986 46678999999986 54
No 99
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.5e-38 Score=341.88 Aligned_cols=214 Identities=26% Similarity=0.365 Sum_probs=186.3
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|++|.++. +..+|+++|++|++||.++|+|+||||||||+++|+|...+ ..|.|.++|.+..
T Consensus 4 i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeecc
Confidence 567888876631 15799999999999999999999999999999999997663 4699999998854
Q ss_pred ----hhhhcceeEEeccCCCC-CCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000753 935 ----QETFARVSGYCEQNDIH-SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1302)
Q Consensus 935 ----~~~~~~~~gyv~Q~~~~-~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1302)
...+++.+|||+|++.. +-.-||.|.+.|+..- ...+.++.+++++++++.+++.+++++. +..|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n---~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLEN---LGLPREEIEERVAEALELVGLEELLDRP-----PFNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhh---cCCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCC
Confidence 45678899999999864 4467999999998643 3455667888999999999999998887 458999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000753 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1302)
Q Consensus 1010 GqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~ 1088 (1302)
||||||+||.+|+.+|++|+|||||||||+.++..+++.++++.++ |.|||++|||.+ .+...+|++++|++ |++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEee
Confidence 9999999999999999999999999999999999999999999876 699999999986 57778999999985 89999
Q ss_pred ecCC
Q 000753 1089 AGPL 1092 (1302)
Q Consensus 1089 ~g~~ 1092 (1302)
+|++
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9985
No 100
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-37 Score=340.93 Aligned_cols=199 Identities=30% Similarity=0.437 Sum_probs=169.0
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh-hhhcceeEEeccCCCCCCCCCHH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVY 958 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~ 958 (1302)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|++
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 90 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVA 90 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHH
Confidence 469999999999999999999999999999999999765 357999999987643 22346799999999999999999
Q ss_pred HHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCC
Q 000753 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1302)
Q Consensus 959 E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD 1038 (1302)
||+.+..... ........+.++++++.+++.+..++.+ ..||||||||++|||+|+.+|++|+|||||+|||
T Consensus 91 ~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD 162 (213)
T cd03259 91 ENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQRVALARALAREPSLLLLDEPLSALD 162 (213)
T ss_pred HHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 9998764332 1223334456889999999987777663 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1039 ARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1039 ~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
+.++..+++.|+++++ .|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 163 AKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999876 4899999999986 56778999999986 7777654
No 101
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.5e-37 Score=355.77 Aligned_cols=214 Identities=28% Similarity=0.374 Sum_probs=181.1
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.+ +++.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~-------------~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSY-------------GDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEe-------------CCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 46777777654 23469999999999999999999999999999999999765 3479999999875
Q ss_pred Ch--hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000753 934 NQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1302)
Q Consensus 934 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1302)
.. ...++.+||++|++.+++.+||+||+.+.+.... ...++..+.++++++.++|.+..++.+ ..|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 32 2346779999999999999999999987554321 223334456788999999988777764 4799999
Q ss_pred HHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000753 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1302)
Q Consensus 1012 rqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~ 1091 (1302)
|||++||+||+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 57778999999985 79999987
Q ss_pred C
Q 000753 1092 L 1092 (1302)
Q Consensus 1092 ~ 1092 (1302)
+
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 102
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=3.1e-37 Score=362.56 Aligned_cols=218 Identities=26% Similarity=0.371 Sum_probs=185.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-cceEEEEccCCCCCCCCCH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|..+|+ +|+|.++|.++....+ ++.++||+|++.+||.+||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 35899999999999999999999999999999999999987 9999999998865443 4789999999999999999
Q ss_pred HHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCC
Q 000753 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1302)
Q Consensus 263 rE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1302)
+||+.|+.+.++.. + . +....++++++.+||++..|+.+..
T Consensus 104 ~eNi~~~l~~~~~~----------~----------~--------------~~~~~~~~~l~~~~l~~~~~~~p~~----- 144 (375)
T PRK09452 104 FENVAFGLRMQKTP----------A----------A--------------EITPRVMEALRMVQLEEFAQRKPHQ----- 144 (375)
T ss_pred HHHHHHHHhhcCCC----------H----------H--------------HHHHHHHHHHHHcCCchhhhCChhh-----
Confidence 99999975432210 0 0 0112356789999999999988876
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeE
Q 000753 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1302)
Q Consensus 343 LSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~i 422 (1302)
|||||||||+|||||+.+|++||||||++|||..++.++.+.|+++.+..+.|+|++.|.+ .++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~-~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQ-EEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999887788888877665 689999999999999999
Q ss_pred EEEcChhHHHHHHHhcCCCCCCCCChHHHH
Q 000753 423 VYQGPRDNVLEFFEHMGFKCPERKGVADFL 452 (1302)
Q Consensus 423 v~~G~~~~~~~~f~~lG~~~p~~~~~adfl 452 (1302)
+..|+++++.+ .|...-+++|+
T Consensus 224 ~~~g~~~~i~~--------~p~~~~~a~~~ 245 (375)
T PRK09452 224 EQDGTPREIYE--------EPKNLFVARFI 245 (375)
T ss_pred EEEcCHHHHHh--------CcccHHHHHhc
Confidence 99999988743 35554555554
No 103
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.6e-37 Score=361.99 Aligned_cols=206 Identities=22% Similarity=0.367 Sum_probs=179.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCcc--ceEEECCcccCCCCc-cceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRAS--GKITYCGHELNEFVP-QRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~--G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 260 (1302)
..+|+|+|+++++|++++|+|||||||||||++|+|..+|+ + |+|.++|+++....+ ++.++||+|++.+||.+
T Consensus 18 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 18 NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 45999999999999999999999999999999999999987 7 999999998865443 46799999999999999
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
||+||+.|+.+..+.. + . +....++++++.+||++..|+.+++
T Consensus 95 tv~enl~~~l~~~~~~----------~----------~--------------~~~~~v~~~l~~~gL~~~~~~~~~~--- 137 (362)
T TIGR03258 95 KVEDNVAFGLRAQKMP----------K----------A--------------DIAERVADALKLVGLGDAAAHLPAQ--- 137 (362)
T ss_pred cHHHHHHHHHHHcCCC----------H----------H--------------HHHHHHHHHHHhcCCCchhhCChhh---
Confidence 9999999976432211 0 0 0112357789999999999998876
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhC-CceEEEEEecCchhHHhhcCeEEEecC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHIL-DVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~-~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+.. +.|+|++.|++ .++..++|+|++|++
T Consensus 138 --LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~-~ea~~l~dri~vl~~ 214 (362)
T TIGR03258 138 --LSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQ-DDALTLADKAGIMKD 214 (362)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCH-HHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999998765 67887777665 588999999999999
Q ss_pred CeEEEEcChhHHH
Q 000753 420 GQIVYQGPRDNVL 432 (1302)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1302)
|+++.+|+++++.
T Consensus 215 G~i~~~g~~~~~~ 227 (362)
T TIGR03258 215 GRLAAHGEPQALY 227 (362)
T ss_pred CEEEEEcCHHHHH
Confidence 9999999999874
No 104
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-37 Score=340.68 Aligned_cols=200 Identities=27% Similarity=0.424 Sum_probs=171.8
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChhhhcceeEEeccCCCCCCCCCHHH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1302)
+.+|+|+|++|++|++++|+||||||||||+++|+|... +.+|+|.++|.+... .++.++|++|++.+++.+|++|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc--ccCcEEEEecccccccCCCHHH
Confidence 469999999999999999999999999999999999765 347999999987642 3567999999999889999999
Q ss_pred HHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCH
Q 000753 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1302)
Q Consensus 960 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~ 1039 (1302)
|+.+....+. ...+...+.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+|||+
T Consensus 93 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 9988654331 223334566889999999987777663 57999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEec-CcEEEEecCC
Q 000753 1040 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKR-GGRVIYAGPL 1092 (1302)
Q Consensus 1040 ~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~-gG~~~~~g~~ 1092 (1302)
.++..+++.|+++.+ .|+|||++||+++ ++...||++++|++ +|+++..+++
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999864 5899999999986 56778999999985 4899887764
No 105
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.6e-37 Score=360.85 Aligned_cols=204 Identities=23% Similarity=0.289 Sum_probs=178.1
Q ss_pred ccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh---hhh----cceeEEeccCCC
Q 000753 878 DRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETF----ARVSGYCEQNDI 950 (1302)
Q Consensus 878 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~----~~~~gyv~Q~~~ 950 (1302)
+.+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+ ++.+|||+|++.
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 45679999999999999999999999999999999999766 358999999988643 223 568999999999
Q ss_pred CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccc
Q 000753 951 HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1302)
Q Consensus 951 ~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illL 1030 (1302)
++|.+||+||+.|...+. ....++..+.+.++++.++|.+..++. +..|||||||||+|||||+.+|+||||
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~-----p~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRY-----PDELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999876543 234455667789999999998887776 447999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1031 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
||||++||+.++..+++.++++.++ |+|||++||+++ ++...+|++++|++ |+++..|++.
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~~ 215 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTPD 215 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCHH
Confidence 9999999999999999999999654 899999999986 57788999999985 7999999754
No 106
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=3.9e-37 Score=354.87 Aligned_cols=206 Identities=29% Similarity=0.439 Sum_probs=178.5
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC--ccceEEEEccCCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1302)
+.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 46999999999999999999999999999999999999987 999999999875432 3467999999999999999
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
|+||+.|.++..+... . +....++.+++.+||.+..++.+++
T Consensus 97 v~e~l~~~~~~~~~~~--------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~~~---- 138 (306)
T PRK13537 97 VRENLLVFGRYFGLSA--------------------A--------------AARALVPPLLEFAKLENKADAKVGE---- 138 (306)
T ss_pred HHHHHHHHHHHcCCCH--------------------H--------------HHHHHHHHHHHHcCCchHhcCchhh----
Confidence 9999998655432110 0 0112346688999999999999876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+++.|+++++. |.|++++.|+. .++.++||+|++|++|+
T Consensus 139 -LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~-g~till~sH~l-~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 139 -LSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLAR-GKTILLTTHFM-EEAERLCDRLCVIEEGR 215 (306)
T ss_pred -CCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC-CCEEEEECCCH-HHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999999753 78888887665 58889999999999999
Q ss_pred EEEEcChhHHHH
Q 000753 422 IVYQGPRDNVLE 433 (1302)
Q Consensus 422 iv~~G~~~~~~~ 433 (1302)
+++.|+++++..
T Consensus 216 i~~~g~~~~l~~ 227 (306)
T PRK13537 216 KIAEGAPHALIE 227 (306)
T ss_pred EEEECCHHHHHh
Confidence 999999998764
No 107
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.4e-37 Score=361.35 Aligned_cols=215 Identities=22% Similarity=0.336 Sum_probs=185.8
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 477888876542 3469999999999999999999999999999999999776 3579999999876
Q ss_pred Ch-hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000753 934 NQ-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1302)
Q Consensus 934 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1302)
.. ...++.+|||+|++.++|.+||+||+.|+...+ ..+..+..+.++++++.++|.++.++. +..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----p~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRK-----PHQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCCHHHH
Confidence 43 234577999999999999999999999976433 223445556789999999999888887 457999999
Q ss_pred HHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000753 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1302)
Q Consensus 1013 qRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~ 1091 (1302)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++...+|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999764 999999999986 67889999999985 89999998
Q ss_pred CC
Q 000753 1092 LG 1093 (1302)
Q Consensus 1092 ~~ 1093 (1302)
+.
T Consensus 229 ~~ 230 (375)
T PRK09452 229 PR 230 (375)
T ss_pred HH
Confidence 64
No 108
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.5e-37 Score=361.82 Aligned_cols=217 Identities=26% Similarity=0.401 Sum_probs=184.2
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|+++.+ +.+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 3 L~i~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSF-------------GRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEe-------------CCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 5667776544 23469999999999999999999999999999999999765 34799999998764
Q ss_pred h-hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000753 935 Q-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1302)
Q Consensus 935 ~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1302)
. ...++.+|||+|++.++|.+||+||+.|....+.. ...+.++..+.+.++++.++|.+..++. +..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRY-----PAQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCCHHHH
Confidence 3 23356799999999999999999999987643211 1233445566789999999999888876 457999999
Q ss_pred HHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000753 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1302)
Q Consensus 1013 qRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~ 1091 (1302)
||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||+++ ++...+|++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999986 67888999999985 89999998
Q ss_pred CC
Q 000753 1092 LG 1093 (1302)
Q Consensus 1092 ~~ 1093 (1302)
+.
T Consensus 221 ~~ 222 (353)
T PRK10851 221 PD 222 (353)
T ss_pred HH
Confidence 64
No 109
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-37 Score=340.45 Aligned_cols=202 Identities=29% Similarity=0.398 Sum_probs=172.6
Q ss_pred cceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh--hhhcceeEEeccCCCCCCCCC
Q 000753 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVT 956 (1302)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 956 (1302)
++.+|+|||+++++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 12 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 12 DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 3469999999999999999999999999999999999765 347999999976532 234567999999999999999
Q ss_pred HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 000753 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1036 (1302)
Q Consensus 957 v~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsg 1036 (1302)
|+|++.+....+. ...++..+.++++++.++|.+..++.+ ..||||||||++||+||+.+|++|+|||||+|
T Consensus 90 v~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~la~al~~~p~llllDEPt~~ 161 (220)
T cd03265 90 GWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRRRLEIARSLVHRPEVLFLDEPTIG 161 (220)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccC
Confidence 9999988654431 223334556889999999988777764 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1037 LDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1037 LD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|++ |+++..|++
T Consensus 162 LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 162 LDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 9999999999999999776 899999999986 57778999999985 788887764
No 110
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-37 Score=337.22 Aligned_cols=198 Identities=27% Similarity=0.441 Sum_probs=170.0
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChhhhcceeEEeccCCCCCCCCCHHH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1302)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..++.++|++|++.+++.+|++|
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e 89 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVID 89 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHH
Confidence 469999999999999999999999999999999999765 358999999987643 34567999999999999999999
Q ss_pred HHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCH
Q 000753 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1302)
Q Consensus 960 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~ 1039 (1302)
|+.+....+. .......+.+.++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 90 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~ 161 (210)
T cd03269 90 QLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKR-----VEELSKGNQQKVQFIAAVIHDPELLILDEPFSGLDP 161 (210)
T ss_pred HHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCc-----HhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 9987654432 22334455688999999998776665 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1040 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1040 ~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 162 ~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 162 VNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999998777899999999986 56678999999985 7777653
No 111
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-37 Score=358.57 Aligned_cols=218 Identities=25% Similarity=0.347 Sum_probs=182.4
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
++++|+++.++. +...+.+|+|+||+|++||++||+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 i~i~~l~~~y~~---------~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQ---------GGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCC---------CCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 467787766531 0113569999999999999999999999999999999999765 34799999998764
Q ss_pred h------hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000753 935 Q------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1302)
Q Consensus 935 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1302)
. ...++.+||++|++.+++.+||+||+.+....+ .....+..+.++++++.++|.+..++. +..||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRY-----PAQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 2 123567999999999999999999998875443 123344456788999999998877776 35799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEE
Q 000753 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1302)
Q Consensus 1009 gGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~ 1087 (1302)
||||||++|||||+.+|++|||||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999754 899999999986 56778999999985 8999
Q ss_pred EecCCC
Q 000753 1088 YAGPLG 1093 (1302)
Q Consensus 1088 ~~g~~~ 1093 (1302)
+.|+..
T Consensus 221 ~~g~~~ 226 (343)
T PRK11153 221 EQGTVS 226 (343)
T ss_pred EEcCHH
Confidence 988753
No 112
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=5.9e-37 Score=336.67 Aligned_cols=199 Identities=27% Similarity=0.394 Sum_probs=169.3
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChh-hhcceeEEeccCCCCCCCCCHH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE-TFARVSGYCEQNDIHSPYVTVY 958 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~ 958 (1302)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.... ..++.++|++|++.+++..|++
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 469999999999999999999999999999999999765 3479999999876431 2245799999999988999999
Q ss_pred HHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCC
Q 000753 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1302)
Q Consensus 959 E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD 1038 (1302)
||+.+....+ ....++..+.++++++.+++.+..+..+ ..||||||||++|||+|+.+|++|+|||||+|||
T Consensus 91 ~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~laral~~~p~llllDEPt~~LD 162 (213)
T cd03301 91 DNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQRVALGRAIVREPKVFLMDEPLSNLD 162 (213)
T ss_pred HHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 9998764432 1223344556889999999987777663 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1039 ARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1039 ~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
+.++..+++.|+++++ .|+|||++||+++ ++...+|++++|.+ |++++.|
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 163 AKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 9999999999999976 4899999999985 56778999999985 7887765
No 113
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.3e-37 Score=312.00 Aligned_cols=197 Identities=26% Similarity=0.355 Sum_probs=172.4
Q ss_pred ccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh-hhhcceeEEeccCCCCCCCCCHHHHHHH
Q 000753 885 SVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVYESLLY 963 (1302)
Q Consensus 885 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~ 963 (1302)
..+++|.+||++||+||||||||||||+|+|...+ .+|+|.|||.+... ....|-++.++|+..+|..+||.+|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 45678999999999999999999999999998774 48999999998654 3345668999999999999999999988
Q ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHH
Q 000753 964 SAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1043 (1302)
Q Consensus 964 ~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~ 1043 (1302)
+..-.+ .. ..+.++.++.++..+||..+.++.. ..||||||||+++||+|+++-+||+||||+|.|||.-+.
T Consensus 95 Gl~P~L--kL-~a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPGL--KL-NAEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCccc--cc-CHHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 753222 12 2345567999999999999999884 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1044 IVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1044 ~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
.+..++.++++ ++.|++++||+|+ +....+|+++++++ |+|.+.|+..
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~~ 215 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGSTQ 215 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccHH
Confidence 99999999974 5899999999997 89999999999986 8999999853
No 114
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.5e-37 Score=325.20 Aligned_cols=206 Identities=25% Similarity=0.397 Sum_probs=187.5
Q ss_pred cccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChhhhcceeEEeccCCCCCCC
Q 000753 875 VGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPY 954 (1302)
Q Consensus 875 ~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ 954 (1302)
++.+++.+++|+||.++||+++|++|+|||||||++++|.|... +.+|.|.++|.+.++. .+.+|||.|.+..++|.
T Consensus 10 K~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~-~~~rIGyLPEERGLy~k 86 (300)
T COG4152 10 KSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQE-IKNRIGYLPEERGLYPK 86 (300)
T ss_pred hccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhh-hhhhcccChhhhccCcc
Confidence 45567889999999999999999999999999999999999876 4589999999998754 45679999999999999
Q ss_pred CCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 000753 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1302)
Q Consensus 955 lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPT 1034 (1302)
+||.|.|.|.|.+. .++.++..+.+..+|+.+++.....+. ++.||.|++|++.+-.+++++|++++||||+
T Consensus 87 ~tv~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~k-----Ik~LSKGnqQKIQfisaviHePeLlILDEPF 158 (300)
T COG4152 87 MTVEDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKK-----IKELSKGNQQKIQFISAVIHEPELLILDEPF 158 (300)
T ss_pred CcHHHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccch-----HHHhhhhhhHHHHHHHHHhcCCCEEEecCCc
Confidence 99999999999886 456777888899999999998887776 4689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
|||||.+.+.+.+.+.++++.|.|||+++|+++ .+.++||++++|++ |+.|..|++.
T Consensus 159 SGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v~ 215 (300)
T COG4152 159 SGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTVE 215 (300)
T ss_pred cCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccHH
Confidence 999999999999999999999999999999987 68899999999986 7888888864
No 115
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-37 Score=359.50 Aligned_cols=215 Identities=24% Similarity=0.362 Sum_probs=185.6
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|++..+. +..+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478888876442 3469999999999999999999999999999999999876 3479999999876
Q ss_pred Ch-hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000753 934 NQ-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1302)
Q Consensus 934 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1302)
.. ...+|.+|||+|++.++|.+||.||+.|....+ ..+..+..+.+.++++.++|.+..++. +.+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~-----~~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRK-----PHQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 43 235678999999999999999999999876533 223455566789999999999888876 457999999
Q ss_pred HHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000753 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1302)
Q Consensus 1013 qRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~ 1091 (1302)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ .|.|+|++||+++ ++...+|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 999999999999999999999999999999999999998865 4899999999986 67889999999985 89999998
Q ss_pred CC
Q 000753 1092 LG 1093 (1302)
Q Consensus 1092 ~~ 1093 (1302)
+.
T Consensus 234 ~~ 235 (377)
T PRK11607 234 PE 235 (377)
T ss_pred HH
Confidence 64
No 116
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=5.4e-37 Score=353.63 Aligned_cols=213 Identities=23% Similarity=0.379 Sum_probs=182.1
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|++..+ +++.+|+|+||++++||++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~-------------~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLY-------------GTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEE-------------CCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 5667766544 23569999999999999999999999999999999999765 35899999998764
Q ss_pred h--hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000753 935 Q--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1302)
Q Consensus 935 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1302)
. ...++.+||++|++.+++.+||.||+.+.+.++. ...++..+.++++++.++|.+..++.+ +.||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 3 2345679999999999999999999998765542 223344556889999999998887764 47999999
Q ss_pred HHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1013 qRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
||++||+||+++|++|||||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999864 799999999986 67788999999985 899999985
Q ss_pred C
Q 000753 1093 G 1093 (1302)
Q Consensus 1093 ~ 1093 (1302)
.
T Consensus 217 ~ 217 (301)
T TIGR03522 217 D 217 (301)
T ss_pred H
Confidence 3
No 117
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-37 Score=360.44 Aligned_cols=214 Identities=27% Similarity=0.369 Sum_probs=182.6
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
++++|+++.+ +++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~i~~l~~~~-------------~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i~ 68 (369)
T PRK11000 4 VTLRNVTKAY-------------GDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRMN 68 (369)
T ss_pred EEEEEEEEEe-------------CCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5677776544 23469999999999999999999999999999999999765 34799999998764
Q ss_pred h-hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000753 935 Q-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1302)
Q Consensus 935 ~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1302)
. ...++.+|||+|++.+++.+||+||+.|....+. ....+..+.++++++.++|.+..++.+ ..|||||||
T Consensus 69 ~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~Q 140 (369)
T PRK11000 69 DVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQRQ 140 (369)
T ss_pred CCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHH
Confidence 3 2234679999999999999999999998765431 233445567899999999988877764 579999999
Q ss_pred HHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1014 Rl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++...||++++|++ |+++..|++
T Consensus 141 RvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~~ 218 (369)
T PRK11000 141 RVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGKP 218 (369)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999999999999999999999998764 899999999986 67788999999985 899999886
Q ss_pred C
Q 000753 1093 G 1093 (1302)
Q Consensus 1093 ~ 1093 (1302)
.
T Consensus 219 ~ 219 (369)
T PRK11000 219 L 219 (369)
T ss_pred H
Confidence 4
No 118
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-36 Score=340.40 Aligned_cols=216 Identities=28% Similarity=0.390 Sum_probs=178.3
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|+++.++ ++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (239)
T cd03296 3 IEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDAT 67 (239)
T ss_pred EEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 56777776542 3469999999999999999999999999999999999765 34799999998754
Q ss_pred hh-hhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCC-CCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000753 935 QE-TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSS-DVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1302)
Q Consensus 935 ~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1302)
.. ..++.++|++|++.+++.+||.||+.+....+... ........+.++++++.++|.+..++. +..||||||
T Consensus 68 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 142 (239)
T cd03296 68 DVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRY-----PAQLSGGQR 142 (239)
T ss_pred cCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCCHHHH
Confidence 31 22456999999999999999999998865432110 012233345678999999998777765 347999999
Q ss_pred HHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000753 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1302)
Q Consensus 1013 qRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~ 1091 (1302)
||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++...||++++|++ |++++.|+
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 220 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVGT 220 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEecC
Confidence 9999999999999999999999999999999999999999764 899999999986 56778999999985 78988887
Q ss_pred C
Q 000753 1092 L 1092 (1302)
Q Consensus 1092 ~ 1092 (1302)
.
T Consensus 221 ~ 221 (239)
T cd03296 221 P 221 (239)
T ss_pred H
Confidence 5
No 119
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-36 Score=338.65 Aligned_cols=207 Identities=26% Similarity=0.369 Sum_probs=174.5
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++||+|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 46999999999999999999999999999999999999887 999999998875432 246799999999999
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
+.+||+||+.++........ .. +....++.+++.+||++..++.+++
T Consensus 90 ~~~tv~~~l~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~ 136 (235)
T cd03261 90 DSLTVFENVAFPLREHTRLS---------EE------------------------EIREIVLEKLEAVGLRGAEDLYPAE 136 (235)
T ss_pred CCCcHHHHHHHHHhhccCCC---------HH------------------------HHHHHHHHHHHHcCCchhhcCChhh
Confidence 99999999988643110000 00 0012345678999998888888876
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|
T Consensus 137 -----LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~-~~~~~~~d~v~~l 210 (235)
T cd03261 137 -----LSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDL-DTAFAIADRIAVL 210 (235)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCH-HHHHHhcCEEEEE
Confidence 9999999999999999999999999999999999999999999998765577888887765 4788899999999
Q ss_pred cCCeEEEEcChhHHH
Q 000753 418 SEGQIVYQGPRDNVL 432 (1302)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1302)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (235)
T cd03261 211 YDGKIVAEGTPEELR 225 (235)
T ss_pred ECCeEEEecCHHHHc
Confidence 999999999987753
No 120
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=8.2e-37 Score=340.92 Aligned_cols=204 Identities=29% Similarity=0.403 Sum_probs=171.9
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChh---h-hcceeEEeccCCCCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE---T-FARVSGYCEQNDIHSPYV 955 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~~~~~~~l 955 (1302)
+.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.+.... . .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~ 90 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPEL 90 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCCCCHHHHHhcCEEEEecccccccCC
Confidence 469999999999999999999999999999999999765 3479999999876431 2 235699999999999999
Q ss_pred CHHHHHHHHHHhhCCCC-------CcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 000753 956 TVYESLLYSAWLRLSSD-------VDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII 1028 (1302)
Q Consensus 956 Tv~E~l~~~~~lr~~~~-------~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~il 1028 (1302)
||+||+.+......... .......+.+.++++.+++.+..++. ++.||||||||++|||||+.+|++|
T Consensus 91 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~ll 165 (236)
T cd03219 91 TVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRP-----AGELSYGQQRRLEIARALATDPKLL 165 (236)
T ss_pred CHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999988654321110 01233445688999999998777665 4579999999999999999999999
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1029 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1029 lLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
+|||||+|||+.++..+++.|++++++|+|||++||+++ ++...||++++|++ |++++.|+.
T Consensus 166 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (236)
T cd03219 166 LLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-GRVIAEGTP 227 (236)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEeecCH
Confidence 999999999999999999999999877999999999986 56678999999985 788888864
No 121
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=8.5e-37 Score=352.37 Aligned_cols=206 Identities=27% Similarity=0.420 Sum_probs=177.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC--ccceEEEEccCCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1302)
+++|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 56999999999999999999999999999999999999987 999999998875421 2457999999999999999
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
|+||+.|.++..+... . +....++.+++.+||++..++.+++
T Consensus 83 v~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~---- 124 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------D------------------------EAEERAEELLELFELGEAADRPVGT---- 124 (302)
T ss_pred HHHHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHcCChhHhCCchhh----
Confidence 9999998655432110 0 0012356789999999988998876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+++.|+++++. |.|++++.|++ .++.++||+|++|++|+
T Consensus 125 -LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvi~~sH~~-~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 125 -YSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKEE-GVTILLTTHYM-EEADKLCDRIAIIDHGR 201 (302)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC-CCEEEEECCCH-HHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999999764 78888877665 58889999999999999
Q ss_pred EEEEcChhHHHH
Q 000753 422 IVYQGPRDNVLE 433 (1302)
Q Consensus 422 iv~~G~~~~~~~ 433 (1302)
+++.|+.+++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999988754
No 122
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=6.8e-37 Score=337.40 Aligned_cols=198 Identities=30% Similarity=0.460 Sum_probs=170.4
Q ss_pred eeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh--hhhcceeEEeccCCCCCCCCCHH
Q 000753 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTVY 958 (1302)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv~ 958 (1302)
.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+||+
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 96 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTAR 96 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHH
Confidence 69999999999999999999999999999999999765 347999999987643 23456799999999999999999
Q ss_pred HHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCC
Q 000753 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1302)
Q Consensus 959 E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD 1038 (1302)
||+.+....+ .....+..+.++++++.+++.+..++. +..||||||||++|||||+.+|++|+|||||+|||
T Consensus 97 e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD 168 (218)
T cd03266 97 ENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRR-----VGGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLD 168 (218)
T ss_pred HHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhh-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCC
Confidence 9998765433 122334456788999999998877776 34799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1039 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
+.++..+.+.|++++++|+|||++||+++ ++...+|++++|++ |++++.|
T Consensus 169 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 169 VMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 99999999999999777999999999985 56778999999986 7777643
No 123
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-37 Score=347.30 Aligned_cols=207 Identities=23% Similarity=0.288 Sum_probs=174.5
Q ss_pred ccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh---hh----hcceeEEec
Q 000753 874 GVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ET----FARVSGYCE 946 (1302)
Q Consensus 874 ~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~----~~~~~gyv~ 946 (1302)
.+.++.+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+... .. .++.++|++
T Consensus 31 ~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~ 108 (269)
T cd03294 31 LKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISMVF 108 (269)
T ss_pred hhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEEEe
Confidence 344556789999999999999999999999999999999999765 347999999987532 11 135799999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000753 947 QNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPS 1026 (1302)
Q Consensus 947 Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~ 1026 (1302)
|++.+++.+||+||+.+..... ........+.++++++.++|.+..++.+ ..||||||||++||+||+.+|+
T Consensus 109 q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~ 180 (269)
T cd03294 109 QSFALLPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPD 180 (269)
T ss_pred cCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999998865432 1223334456889999999988777764 4799999999999999999999
Q ss_pred CccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1027 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1027 illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
||||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++...||++++|++ |++++.|+.
T Consensus 181 illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 181 ILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred EEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999998754 899999999976 56778999999985 789888875
No 124
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.3e-36 Score=355.61 Aligned_cols=210 Identities=28% Similarity=0.448 Sum_probs=179.0
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-cceEEEEccCCCCCCCCCH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|++.++|.+||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 45999999999999999999999999999999999999987 9999999998865433 3679999999999999999
Q ss_pred HHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCC
Q 000753 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1302)
Q Consensus 263 rE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1302)
+||+.|+.+....... ++. .+....++.+++.+||++..|+.+.+
T Consensus 92 ~eni~~~~~~~~~~~~-----------------~~~-------------~~~~~~~~~~l~~~~L~~~~~~~~~~----- 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRER-----------------PNA-------------AAIKAKVTQLLEMVQLAHLADRYPAQ----- 136 (353)
T ss_pred HHHHHhhhhhcccccC-----------------CCH-------------HHHHHHHHHHHHHcCCchhhhCChhh-----
Confidence 9999987543110000 000 00122356789999999888888876
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeE
Q 000753 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1302)
Q Consensus 343 LSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~i 422 (1302)
|||||||||+|||||+.+|++++|||||+|||+.++.++.+.|+++.+..+.|+|++.|.+ .++..++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~-~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQ-EEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999876677877776654 688999999999999999
Q ss_pred EEEcChhHHH
Q 000753 423 VYQGPRDNVL 432 (1302)
Q Consensus 423 v~~G~~~~~~ 432 (1302)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 125
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=8.5e-37 Score=339.91 Aligned_cols=202 Identities=27% Similarity=0.377 Sum_probs=172.1
Q ss_pred cceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh---hh-hcceeEEeccCCCCCCC
Q 000753 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ET-FARVSGYCEQNDIHSPY 954 (1302)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~-~~~~~gyv~Q~~~~~~~ 954 (1302)
++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... .. .++.++|++|++.+++.
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 12 KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 3469999999999999999999999999999999999765 347999999987532 12 23569999999999999
Q ss_pred CCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 000753 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1302)
Q Consensus 955 lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPT 1034 (1302)
+||+||+.+....+. .......+.++++++.+++.+..++. +..||||||||++||+||+.+|++|+|||||
T Consensus 90 ~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt 161 (232)
T cd03218 90 LTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSK-----ASSLSGGERRRVEIARALATNPKFLLLDEPF 161 (232)
T ss_pred CcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 999999987643321 22233445678999999998777665 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 162 ~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 217 (232)
T cd03218 162 AGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGTP 217 (232)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeCH
Confidence 999999999999999999877999999999986 67888999999985 788888875
No 126
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5.3e-37 Score=334.91 Aligned_cols=192 Identities=30% Similarity=0.402 Sum_probs=163.1
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChhhhcceeEEeccCCC-CCCCCCHH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDI-HSPYVTVY 958 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~-~~~~lTv~ 958 (1302)
+.+|+|+||++++||+++|+|||||||||||++|+|... +.+|+|.++|.+......++.+||++|++. .+..+|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 469999999999999999999999999999999999765 357999999987654445667999999974 33467999
Q ss_pred HHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCC
Q 000753 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1302)
Q Consensus 959 E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD 1038 (1302)
||+.+..... . . ..+.++++++.++|.+..++. +..||||||||++|||||+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL---D--A--GNEQAETVLKDLDLYALKERH-----PLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc---C--c--cHHHHHHHHHHcCCchhcCCC-----chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754322 1 1 124578999999998877776 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEE
Q 000753 1039 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1302)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~ 1087 (1302)
+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999999777999999999986 56678999999986 6653
No 127
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=357.75 Aligned_cols=206 Identities=23% Similarity=0.321 Sum_probs=179.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-cceEEEEccCCCCCCCCCH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1302)
.++|+|+|+.+++|++++|+|||||||||||++|+|..+|+ +|+|.++|+++....+ ++.++||+|++.+||++||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 35899999999999999999999999999999999999987 9999999998865433 5789999999999999999
Q ss_pred HHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCC
Q 000753 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1302)
Q Consensus 263 rE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1302)
.||+.|+.+..+.. + . +....++.+++.+||.+..++.+.+
T Consensus 109 ~eNi~~~l~~~~~~----------~----------~--------------~~~~~v~~~l~~l~L~~~~~~~~~~----- 149 (377)
T PRK11607 109 EQNIAFGLKQDKLP----------K----------A--------------EIASRVNEMLGLVHMQEFAKRKPHQ----- 149 (377)
T ss_pred HHHHHHHHHHcCCC----------H----------H--------------HHHHHHHHHHHHcCCchhhcCChhh-----
Confidence 99999975432210 0 0 0112356789999999888888876
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeE
Q 000753 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1302)
Q Consensus 343 LSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~i 422 (1302)
|||||||||+|||||+.+|++||||||++|||..++.++.+.|+++.+..+.|+|++.|++ .++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~-~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQ-EEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCH-HHHHHhCCEEEEEeCCEE
Confidence 9999999999999999999999999999999999999999999998776788888887665 588999999999999999
Q ss_pred EEEcChhHHH
Q 000753 423 VYQGPRDNVL 432 (1302)
Q Consensus 423 v~~G~~~~~~ 432 (1302)
+..|+++++.
T Consensus 229 ~~~g~~~~~~ 238 (377)
T PRK11607 229 VQIGEPEEIY 238 (377)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 128
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=6.2e-37 Score=361.78 Aligned_cols=217 Identities=29% Similarity=0.368 Sum_probs=182.8
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|+++.+ +++.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 4 L~~~nls~~y-------------~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i~ 68 (402)
T PRK09536 4 IDVSDLSVEF-------------GDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDVE 68 (402)
T ss_pred EEEeeEEEEE-------------CCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEcC
Confidence 5677776543 34579999999999999999999999999999999999765 35799999998764
Q ss_pred h---hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000753 935 Q---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1302)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1302)
. ..+++.+|||+|++.+++.+||+|++.+....+.. .....+...+.++++++.+++.+..++.+ ..||||
T Consensus 69 ~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSgG 143 (402)
T PRK09536 69 ALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSGG 143 (402)
T ss_pred cCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 3 34567899999999998999999999876422110 01112334567899999999998888764 579999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1011 qrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
||||+.|||||+++|++|||||||+|||+.++..++++|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|
T Consensus 144 erQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~G 221 (402)
T PRK09536 144 ERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAAG 221 (402)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 999999999999999999999999999999999999999999877999999999986 57788999999985 8899999
Q ss_pred CCC
Q 000753 1091 PLG 1093 (1302)
Q Consensus 1091 ~~~ 1093 (1302)
++.
T Consensus 222 ~~~ 224 (402)
T PRK09536 222 PPA 224 (402)
T ss_pred CHH
Confidence 864
No 129
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.4e-36 Score=350.45 Aligned_cols=229 Identities=24% Similarity=0.375 Sum_probs=188.8
Q ss_pred cCCCCCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceEeeceEEEEeCCeEEEEEcCCCC
Q 000753 129 VGIEIPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGA 208 (1302)
Q Consensus 129 ~g~~~p~i~v~~~~l~v~~~~~~~~~~~pt~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 208 (1302)
..+..|.-.|+|+|++.+-. ++++||+++||+|++|+-+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~---------------------------------~k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYG---------------------------------PKRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeC---------------------------------CCCceecceeEEecCCCEEEEECCCCC
Confidence 46777788899999887631 234599999999999999999999999
Q ss_pred CHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCCCCCCHHHHHHhhhhccCCCchhhHHHHh
Q 000753 209 GKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAEL 285 (1302)
Q Consensus 209 GKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~ 285 (1302)
||||+|++|.+.++ + +|+|.+||+++++..+ |+.||||||+..+|.+ ||.+||.++..-- .++...+.
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFnd-TIl~NI~YGn~sa----s~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFND-TILYNIKYGNPSA----SDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCcccccch-hHHHHhhcCCCCc----CHHHHHHH
Confidence 99999999999998 4 9999999999987654 6889999999999975 9999999873211 12222222
Q ss_pred hHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCChHHHHHHHHHHHHhcCCCEEE
Q 000753 286 SRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLY 365 (1302)
Q Consensus 286 ~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vll 365 (1302)
|++ .+ ..|. ...|++.++|.||+ .++-|||||||||++|||++.+|+|++
T Consensus 461 ~k~---------------------a~-----~hd~---i~~l~~GY~T~VGe-rG~~LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKR---------------------AG-----LHDV---ISRLPDGYQTLVGE-RGLMLSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHH---------------------cC-----cHHH---HHhccccchhhHhh-cccccccchHHHHHHHHHHhcCCCeEE
Confidence 221 11 1232 23488999999997 333489999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEEEEcChhHHHH
Q 000753 366 MDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 366 LDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv~~G~~~~~~~ 433 (1302)
+|||||.||+.|..++++.+.+.. .++|+|+..|.. .+..-||+|++|++|++...|+++|++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~~--~~rTvI~IvH~l--~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDVM--SGRTVIMIVHRL--DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHhc--CCCeEEEEEecc--hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 999999999999999999999843 489999998865 6788999999999999999999999876
No 130
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-37 Score=322.93 Aligned_cols=207 Identities=28% Similarity=0.409 Sum_probs=175.6
Q ss_pred cccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh----hhhcceeEEeccCCC
Q 000753 875 VGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQNDI 950 (1302)
Q Consensus 875 ~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~ 950 (1302)
..|++.++|++||+++++||+++|+|+|||||||||++|+|..+. .+|+|.++|.++.. +..++.++||||...
T Consensus 11 ~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~ 88 (237)
T COG0410 11 AGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDITGLPPHERARLGIAYVPEGRR 88 (237)
T ss_pred ecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeecCCCCHHHHHhCCeEeCccccc
Confidence 345668899999999999999999999999999999999997663 47999999998754 345677999999999
Q ss_pred CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcc
Q 000753 951 HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVE-LKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1029 (1302)
Q Consensus 951 ~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~ill 1029 (1302)
.||.+||+|||..++..+.. ++.....++++.+++- |.+.+++..| .|||||||.|+|||||+.+|++|+
T Consensus 89 iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSGGEQQMLAiaRALm~~PklLL 159 (237)
T COG0410 89 IFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSGGEQQMLAIARALMSRPKLLL 159 (237)
T ss_pred chhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCChHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999988755432 1112222677888775 6667777654 699999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCc
Q 000753 1030 MDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1302)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~ 1094 (1302)
|||||.||-|.-.+.|.+.|+++.++ |.||+++-++.. ...+.+|+.++|.+ |++++.|+..+
T Consensus 160 LDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~~G~~~e 223 (237)
T COG0410 160 LDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVLSGTAAE 223 (237)
T ss_pred ecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEEecCHHH
Confidence 99999999999999999999999865 779999998865 46678999999985 89999998643
No 131
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.3e-36 Score=334.89 Aligned_cols=221 Identities=36% Similarity=0.616 Sum_probs=179.1
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCC-CceeEEEEEEcCccC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT-GGYIEGDIKISGYPK 933 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~-~g~~~G~i~i~g~~~ 933 (1302)
+.|+|+++.++.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|... +++.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 3567777655311 013579999999999999999999999999999999999754 123579999999887
Q ss_pred ChhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHH-HHHHcCCcccccccccCCCCCCCCHHHH
Q 000753 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDE-VMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1302)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~-~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1302)
.....++.++|++|++.+++.+||+||+.+..................+++ .++.+++.+..++. ++.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 655567789999999999999999999998755432221122222234555 89999988776665 457999999
Q ss_pred HHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1013 qRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++..++.+.||++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998777999999999974367889999999985 7888764
No 132
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=9.9e-37 Score=338.18 Aligned_cols=202 Identities=26% Similarity=0.320 Sum_probs=169.6
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCC-----CCceeEEEEEEcCccCCh-----hhhcceeEEeccCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYIEGDIKISGYPKNQ-----ETFARVSGYCEQND 949 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~-----~~g~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 949 (1302)
+.+|+|+|++|++||+++|+||||||||||+++|+|.. . +.+|+|.++|.+... ..+++.+||++|++
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 90 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDGKDIYDLDVDVLELRRRVGMVFQKP 90 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECCEEhhhcchHHHHHHhhEEEEecCc
Confidence 46999999999999999999999999999999999976 4 457999999987532 23456799999999
Q ss_pred CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcc
Q 000753 950 IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1029 (1302)
Q Consensus 950 ~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~ill 1029 (1302)
.++ .+||+||+.+....+. ........+.++++++.+++.+..+.... +.+||||||||++||+||+.+|++|+
T Consensus 91 ~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~qrv~la~al~~~p~lll 164 (227)
T cd03260 91 NPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQQRLCLARALANEPEVLL 164 (227)
T ss_pred hhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 888 7999999988654331 11122234568899999999876555421 25799999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1030 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
|||||+|||+.++..+++.|++++++ +|||++||+++ ++...||++++|.+ |++++.|+.
T Consensus 165 lDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 224 (227)
T cd03260 165 LDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GRLVEFGPT 224 (227)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEecCc
Confidence 99999999999999999999999876 99999999986 56678999999985 789888875
No 133
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=8.7e-37 Score=334.02 Aligned_cols=195 Identities=30% Similarity=0.427 Sum_probs=167.7
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh-hhhcceeEEeccCCCCCCCCCHH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVY 958 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~ 958 (1302)
+.+|+|+||++++|++++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTAR 90 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccchHHHHhhEEEecCCCccCccCcHH
Confidence 469999999999999999999999999999999999765 358999999987643 23456799999999999999999
Q ss_pred HHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCC
Q 000753 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1302)
Q Consensus 959 E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD 1038 (1302)
||+.+....+. . ..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD 158 (208)
T cd03268 91 ENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQRLGIALALLGNPDLLILDEPTNGLD 158 (208)
T ss_pred HHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCC
Confidence 99988654321 1 1245788999999988777663 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1039 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
+.++..+.+.|++++++|+|||++||++. ++.+.+|++++|++ |++++.|
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 159 PDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999998877899999999986 46678999999985 7887654
No 134
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-36 Score=338.55 Aligned_cols=200 Identities=27% Similarity=0.341 Sum_probs=171.7
Q ss_pred eeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChh------hhcceeEEeccCCCCCCC
Q 000753 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE------TFARVSGYCEQNDIHSPY 954 (1302)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~~~~~~ 954 (1302)
.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.++... ..++.++|++|++.+++.
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSS 96 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCC
Confidence 69999999999999999999999999999999999765 3479999999876421 235679999999999999
Q ss_pred CCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 000753 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1302)
Q Consensus 955 lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPT 1034 (1302)
+|++||+.+....+. .......+.++++++.++|.+..+.. +..||||||||++||++|+.+|++|+|||||
T Consensus 97 ~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllLDEP~ 168 (233)
T cd03258 97 RTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAY-----PAQLSGGQKQRVGIARALANNPKVLLCDEAT 168 (233)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCC
Confidence 999999988654331 22334455688999999998777765 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1035 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 169 ~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 225 (233)
T cd03258 169 SALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVVEEGTV 225 (233)
T ss_pred CcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999998765 899999999986 56678999999985 889888864
No 135
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-36 Score=356.36 Aligned_cols=206 Identities=29% Similarity=0.418 Sum_probs=172.8
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCCCCCCCC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 261 (1302)
++++|+|+++++|+.++|+|+||||||||+++|+|+++|+ +|+|.+||++..+.. ++++++||+|++.+|+. |
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~g-T 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAG-T 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCccccc-c
Confidence 6899999999999999999999999999999999999987 999999999887665 57899999999999975 9
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
+||||.++..-. .++++.+..+.. .+.+.+.-++..||.+|+ .++
T Consensus 411 ireNi~l~~~~~----------------------s~e~i~~al~~a------------~l~~~v~~p~GLdt~ige-~G~ 455 (559)
T COG4988 411 IRENILLARPDA----------------------SDEEIIAALDQA------------GLLEFVPKPDGLDTVIGE-GGA 455 (559)
T ss_pred HHHHhhccCCcC----------------------CHHHHHHHHHHh------------cHHHhhcCCCcccchhcc-CCC
Confidence 999999863210 011111111110 112222225678999995 688
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
||||||+|||++|||++.+++++++||||++||.+|...|.+.|.++++ ++|++++.|++ +...-+|+|++|++|+
T Consensus 456 ~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~itHrl--~~~~~~D~I~vld~G~ 531 (559)
T COG4988 456 GLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLVITHRL--EDAADADRIVVLDNGR 531 (559)
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEEEEcCh--HHHhcCCEEEEecCCc
Confidence 9999999999999999999999999999999999999999999999987 58999988875 5677899999999999
Q ss_pred EEEEcChhHHHH
Q 000753 422 IVYQGPRDNVLE 433 (1302)
Q Consensus 422 iv~~G~~~~~~~ 433 (1302)
++.+|.++++.+
T Consensus 532 l~~~g~~~~L~~ 543 (559)
T COG4988 532 LVEQGTHEELSE 543 (559)
T ss_pred eeccCCHHHHhh
Confidence 999999999854
No 136
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=8e-37 Score=336.82 Aligned_cols=193 Identities=31% Similarity=0.437 Sum_probs=164.5
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChh------h-hcceeEEeccCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE------T-FARVSGYCEQNDIHS 952 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~------~-~~~~~gyv~Q~~~~~ 952 (1302)
+.+|+|+||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+.... . .++.++|++|++.++
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLL 94 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccC
Confidence 469999999999999999999999999999999999765 3479999999875421 1 245799999999999
Q ss_pred CCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccC
Q 000753 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1302)
Q Consensus 953 ~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDE 1032 (1302)
+.+||+||+.+....+. .......+.++++++.++|.+..++. +..||||||||++|||||+.+|++|||||
T Consensus 95 ~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllLDE 166 (218)
T cd03255 95 PDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHY-----PSELSGGQQQRVAIARALANDPKIILADE 166 (218)
T ss_pred CCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcC-----hhhcCHHHHHHHHHHHHHccCCCEEEEcC
Confidence 99999999998754432 22233445688999999998777765 34799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000753 1033 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1302)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~ 1085 (1302)
||+|||+.++..+.+.|+++++ .|+|||++||+++ ++ +.||++++|++ |+
T Consensus 167 P~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~-G~ 217 (218)
T cd03255 167 PTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRD-GK 217 (218)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeC-Cc
Confidence 9999999999999999999976 5899999999986 34 48999999986 54
No 137
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=346.73 Aligned_cols=218 Identities=21% Similarity=0.322 Sum_probs=178.7
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
++++|+++.++.. ....+.+|+||||+|++||++||+||||||||||+++|+|... +..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~--------~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEG--------TPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCC--------CccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECC
Confidence 5778887765310 0012469999999999999999999999999999999999765 34799999998764
Q ss_pred h-----hhhcceeEEeccCCC-CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc--ccccccccCCCCCC
Q 000753 935 Q-----ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK--SLNDSMVGLPGVSG 1006 (1302)
Q Consensus 935 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~--~~~~~~~g~~~~~~ 1006 (1302)
. ...++.+|||+|++. .+...||+||+.|..... ....++..+.++++++.++|. +..++. +..
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----ccc
Confidence 3 245678999999973 233579999998865432 234455556789999999996 556655 457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000753 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1302)
Q Consensus 1007 LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~ 1085 (1302)
||||||||++||+||+.+|++|||||||+|||+.++..+++.|++++++ |+|||++||+++ ++...||++++|++ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 899999999975 46678999999985 89
Q ss_pred EEEecCC
Q 000753 1086 VIYAGPL 1092 (1302)
Q Consensus 1086 ~~~~g~~ 1092 (1302)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 9998875
No 138
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.5e-36 Score=333.61 Aligned_cols=193 Identities=29% Similarity=0.389 Sum_probs=165.2
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh------hhhcceeEEeccCCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHSP 953 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 953 (1302)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLP 92 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEecChhhcc
Confidence 469999999999999999999999999999999999765 347999999987642 124567999999999999
Q ss_pred CCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCC
Q 000753 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1302)
Q Consensus 954 ~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEP 1033 (1302)
.+|+.||+.+....+. ...+...+.++++++.+++.+..++. +..||||||||++|||||+.+|++|+||||
T Consensus 93 ~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~lllLDEP 164 (214)
T TIGR02673 93 DRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAF-----PEQLSGGEQQRVAIARAIVNSPPLLLADEP 164 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 9999999988654321 22333446688999999998766665 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000753 1034 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1302)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~g 1083 (1302)
|+|||+.++..+.+.|++++++|+|||++||+++ ++...||++++|++|
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 165 TGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 9999999999999999998777999999999986 566789999999863
No 139
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-36 Score=340.62 Aligned_cols=204 Identities=30% Similarity=0.373 Sum_probs=170.2
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh------hhhcceeEEeccCCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHSP 953 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 953 (1302)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 469999999999999999999999999999999999765 347999999987542 234567999999999999
Q ss_pred CCCHHHHHHHHHHhh-----CCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 000753 954 YVTVYESLLYSAWLR-----LSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII 1028 (1302)
Q Consensus 954 ~lTv~E~l~~~~~lr-----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~il 1028 (1302)
.+||+||+.+..... ...........+.+.++++.++|.+..+.. +..||||||||++||+||+.+|++|
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----ADQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999998753210 000111123345678899999998776665 4579999999999999999999999
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1029 FMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1029 lLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
||||||+|||+.++..+++.|+++++ .|+|||++||+++ ++...||++++|.+ |++++.|+.
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 229 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD-GRIVFDGPP 229 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecCH
Confidence 99999999999999999999999975 4899999999986 56678999999985 789888875
No 140
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.6e-36 Score=337.66 Aligned_cols=202 Identities=24% Similarity=0.373 Sum_probs=172.3
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh-----hhhcceeEEeccCCCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-----ETFARVSGYCEQNDIHSPY 954 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~ 954 (1302)
+.+|+|+|+++++||++||+|+||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPH 91 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCChhHHHHhhceEEEecccccCCC
Confidence 469999999999999999999999999999999999765 357999999987642 2345679999999999999
Q ss_pred CCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 000753 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1302)
Q Consensus 955 lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPT 1034 (1302)
+||+||+.+...... .....+..+.+.++++.++|.+..+.. +..||||||||++|||||+.+|++|+|||||
T Consensus 92 ~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEP~ 164 (240)
T PRK09493 92 LTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHY-----PSELSGGQQQRVAIARALAVKPKLMLFDEPT 164 (240)
T ss_pred CcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 999999987542111 122334456688999999998777765 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
+|||+.++..+.+.|++++++|+|||++||+++ ++...||++++|++ |++++.|+.
T Consensus 165 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 220 (240)
T PRK09493 165 SALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAEDGDP 220 (240)
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeCCH
Confidence 999999999999999999877999999999986 56678999999985 789998875
No 141
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-36 Score=356.21 Aligned_cols=206 Identities=26% Similarity=0.382 Sum_probs=178.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-cceEEEEccCCCCCCCCCH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|++.+++.+||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999987 9999999998765433 4679999999999999999
Q ss_pred HHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCC
Q 000753 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1302)
Q Consensus 263 rE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1302)
+||+.|+.+..+.. +. +....++.+++.+||++..++.+++
T Consensus 93 ~eni~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~lgL~~~~~~~~~~----- 133 (369)
T PRK11000 93 AENMSFGLKLAGAK----------KE------------------------EINQRVNQVAEVLQLAHLLDRKPKA----- 133 (369)
T ss_pred HHHHHhHHhhcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhcCChhh-----
Confidence 99999875432210 00 0112356789999999888888876
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeE
Q 000753 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1302)
Q Consensus 343 LSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~i 422 (1302)
|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .++..++|+|++|++|++
T Consensus 134 LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~-~~~~~~~d~i~vl~~G~i 212 (369)
T PRK11000 134 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQ-VEAMTLADKIVVLDAGRV 212 (369)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCH-HHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999876678888887765 588899999999999999
Q ss_pred EEEcChhHHH
Q 000753 423 VYQGPRDNVL 432 (1302)
Q Consensus 423 v~~G~~~~~~ 432 (1302)
+..|+++++.
T Consensus 213 ~~~g~~~~i~ 222 (369)
T PRK11000 213 AQVGKPLELY 222 (369)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 142
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=3e-36 Score=339.36 Aligned_cols=214 Identities=26% Similarity=0.374 Sum_probs=178.4
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
++++|+++.++ ++.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEcc
Confidence 56777776542 2469999999999999999999999999999999999765 34799999998653
Q ss_pred h-----------hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000753 935 Q-----------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPG 1003 (1302)
Q Consensus 935 ~-----------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~ 1003 (1302)
. ...++.++|++|++.+++.+|+.||+.+...... ....+...+.+.++++.++|.+..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 1 2345679999999999999999999987543211 122334455688999999998776665
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000753 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1302)
Q Consensus 1004 ~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~g 1083 (1302)
+..||||||||++||++|+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 4579999999999999999999999999999999999999999999999877999999999986 56678999999985
Q ss_pred cEEEEecCC
Q 000753 1084 GRVIYAGPL 1092 (1302)
Q Consensus 1084 G~~~~~g~~ 1092 (1302)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 789888874
No 143
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-36 Score=334.82 Aligned_cols=217 Identities=26% Similarity=0.359 Sum_probs=177.8
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++.. ...+.+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 36788888765310 011469999999999999999999999999999999999765 3589999999876
Q ss_pred Chh------hh-cceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000753 934 NQE------TF-ARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSG 1006 (1302)
Q Consensus 934 ~~~------~~-~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 1006 (1302)
... .. ++.++|++|++.+++.+|++||+.+...++ ....++..+.++++++.++|.+..++. +..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHR-----PSE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhh
Confidence 431 12 256999999999999999999998865432 122334446688999999998776665 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000753 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1302)
Q Consensus 1007 LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~ 1085 (1302)
||||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++++ .|+|||++||+++ ....+|++++|.+ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~--~~~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ--LAKRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999875 5899999999975 3455789999975 89
Q ss_pred EEEecCC
Q 000753 1086 VIYAGPL 1092 (1302)
Q Consensus 1086 ~~~~g~~ 1092 (1302)
+++.+++
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 9988875
No 144
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.1e-37 Score=315.26 Aligned_cols=211 Identities=22% Similarity=0.365 Sum_probs=182.9
Q ss_pred cccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc----cceEEEEccCCCC
Q 000753 181 KRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLH 256 (1302)
Q Consensus 181 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~ 256 (1302)
.+++++++|||+.+++||+++++|||||||||...++.|+..|+ +|+|.++|.+++.... +..+||+||++..
T Consensus 14 y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SI 90 (243)
T COG1137 14 YKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASI 90 (243)
T ss_pred hCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchH
Confidence 35678999999999999999999999999999999999999998 9999999999987754 3469999999999
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccccccccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 336 (1302)
|-.+||+|||.-..+.+.... + ..+.+...+.+|+.|+|.|++|.+-.
T Consensus 91 Fr~LtV~dNi~~vlE~~~~d~---------------------~-----------~~~~~~~l~~LL~ef~i~hlr~~~a~ 138 (243)
T COG1137 91 FRKLTVEDNIMAVLEIREKDL---------------------K-----------KAERKEELDALLEEFHITHLRDSKAY 138 (243)
T ss_pred hhcCcHHHHHHHHHhhhhcch---------------------h-----------HHHHHHHHHHHHHHhchHHHhcCccc
Confidence 999999999976544321100 0 01123346789999999999998876
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEE
Q 000753 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1302)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iil 416 (1302)
. ||||||+|+.|||||+.+|+.++||||++|+||.+..+|.+.++.+++. |.-++|+-|. ..|+..++||.++
T Consensus 139 s-----LSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~r-giGvLITDHN-VREtL~i~dRaYI 211 (243)
T COG1137 139 S-----LSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDR-GIGVLITDHN-VRETLDICDRAYI 211 (243)
T ss_pred c-----cccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhC-CceEEEcccc-HHHHHhhhheEEE
Confidence 6 9999999999999999999999999999999999999999999999874 7778887654 5699999999999
Q ss_pred ecCCeEEEEcChhHHHH
Q 000753 417 LSEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 417 L~~G~iv~~G~~~~~~~ 433 (1302)
+++|++..+|+++++.+
T Consensus 212 i~~G~vla~G~p~ei~~ 228 (243)
T COG1137 212 ISDGKVLAEGSPEEIVN 228 (243)
T ss_pred EecCeEEecCCHHHHhc
Confidence 99999999999999864
No 145
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.5e-36 Score=335.14 Aligned_cols=200 Identities=26% Similarity=0.411 Sum_probs=171.1
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh--hhhcceeEEeccCCCCCCCCCH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1302)
+.+|+|||+++++||++||+||||||||||+++|+|... +.+|+|.++|.+... ..+++.+||++|++.+++.+|+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 92 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTV 92 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccchHHHhhhEEEecCcCCccccCCH
Confidence 569999999999999999999999999999999999765 357999999987642 3345679999999999999999
Q ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 000753 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1302)
Q Consensus 958 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgL 1037 (1302)
+||+.+....+. .......+.++++++.++|.+..++.+ ..||+|||||++|||+|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~~~L 164 (220)
T cd03263 93 REHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGL 164 (220)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 999988654332 223334456889999999987776653 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
|+.++..+.+.|+++++ ++|||++||+++ .+.+.||++++|++ |++++.|+.
T Consensus 165 D~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 165 DPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred CHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999875 699999999986 46678999999985 788888864
No 146
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=333.50 Aligned_cols=207 Identities=26% Similarity=0.370 Sum_probs=180.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccC----CCCccceEEEEccCC-CCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELN----EFVPQRTCAYISQHD-LHHG 258 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 258 (1302)
..+|+|+|+.+++|+.++|+||||||||||+++|+|.+.|. +|+|.++|.+.. ....++.+|||+|++ ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 57999999999999999999999999999999999999997 899999999865 233468899999997 3445
Q ss_pred CCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCc
Q 000753 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1302)
Q Consensus 259 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 338 (1302)
.-||.|.++|+.+..+.... +...+++.+++.+||.+.++..+-+
T Consensus 94 ~~tV~~evafg~~n~g~~~~----------------------------------e~~~rv~~~l~~vgl~~~~~r~p~~- 138 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPRE----------------------------------EIEERVAEALELVGLEELLDRPPFN- 138 (235)
T ss_pred cCcHHHHHhhchhhcCCCHH----------------------------------HHHHHHHHHHHHcCchhhccCCccc-
Confidence 67999999999876654210 1233577899999999999998877
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEec
Q 000753 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1302)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~ 418 (1302)
|||||||||+||.+|+.+|++++|||||||||+..+.++++.++++.+..+.|+|++.|+ ...+..++|++++|+
T Consensus 139 ----LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd-~~~~~~~ad~v~vl~ 213 (235)
T COG1122 139 ----LSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHD-LELVLEYADRVVVLD 213 (235)
T ss_pred ----cCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCc-HHHHHhhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999998766788877655 568889999999999
Q ss_pred CCeEEEEcChhHHHH
Q 000753 419 EGQIVYQGPRDNVLE 433 (1302)
Q Consensus 419 ~G~iv~~G~~~~~~~ 433 (1302)
+|+++++|++.++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999877654
No 147
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.8e-36 Score=351.17 Aligned_cols=206 Identities=30% Similarity=0.419 Sum_probs=177.6
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC--ccceEEEEccCCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1302)
+.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+||++|++.+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 45999999999999999999999999999999999999987 999999999875432 3467999999999999999
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
|+||+.|.+...+... . +....++.+++.+||++..++.+++
T Consensus 131 v~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~ll~~~~L~~~~~~~~~~---- 172 (340)
T PRK13536 131 VRENLLVFGRYFGMST----------R------------------------EIEAVIPSLLEFARLESKADARVSD---- 172 (340)
T ss_pred HHHHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHcCCchhhCCChhh----
Confidence 9999987544322100 0 0011245678899999999999887
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
|||||||||+||+||+++|++++|||||+|||+.++.++++.|+++++ .|.|++++.|+. .++.++||+|++|++|+
T Consensus 173 -LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~g~tilisSH~l-~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 173 -LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RGKTILLTTHFM-EEAERLCDRLCVLEAGR 249 (340)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEECCCH-HHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999976 478888887654 68899999999999999
Q ss_pred EEEEcChhHHHH
Q 000753 422 IVYQGPRDNVLE 433 (1302)
Q Consensus 422 iv~~G~~~~~~~ 433 (1302)
++++|+.+++..
T Consensus 250 i~~~g~~~~l~~ 261 (340)
T PRK13536 250 KIAEGRPHALID 261 (340)
T ss_pred EEEEcCHHHHHh
Confidence 999999998864
No 148
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.3e-36 Score=332.26 Aligned_cols=194 Identities=26% Similarity=0.375 Sum_probs=165.8
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh------hhhcceeEEeccCCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHSP 953 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 953 (1302)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 469999999999999999999999999999999999765 347999999987532 124567999999999999
Q ss_pred CCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCC
Q 000753 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1302)
Q Consensus 954 ~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEP 1033 (1302)
.+|++||+.+....+. ...++..+.++++++.+++.+..++. +..||||||||++|||||+.+|++|+||||
T Consensus 92 ~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP 163 (214)
T cd03292 92 DRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRAL-----PAELSGGEQQRVAIARAIVNSPTILIADEP 163 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999988654332 22334455688999999998776665 347999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000753 1034 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1302)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~ 1085 (1302)
|+|||+.++..+.+.|++++++|+|||++||+++ .+.+.||++++|++ |+
T Consensus 164 t~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 164 TGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred CCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999777999999999975 46667999999985 54
No 149
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.9e-37 Score=324.30 Aligned_cols=211 Identities=27% Similarity=0.365 Sum_probs=182.7
Q ss_pred cccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChh----hhcceeEEeccCCC
Q 000753 875 VGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE----TFARVSGYCEQNDI 950 (1302)
Q Consensus 875 ~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~ 950 (1302)
+..+...+++|||+++++||++||+||||||||||+|+|+|..+ +..|+|.++|.++... ..+..++--+|...
T Consensus 12 k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~r 89 (250)
T COG0411 12 KRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIARTFQITR 89 (250)
T ss_pred eecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhccceeeccccc
Confidence 34567889999999999999999999999999999999999766 3479999999987542 23456888999999
Q ss_pred CCCCCCHHHHHHHHHHhhC--------CC-CCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHH
Q 000753 951 HSPYVTVYESLLYSAWLRL--------SS-DVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVEL 1021 (1302)
Q Consensus 951 ~~~~lTv~E~l~~~~~lr~--------~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL 1021 (1302)
+|+.|||.||+..++..+. +. ....++..+++.++|+.+||.+.+|...+ +||+||||||.|||||
T Consensus 90 lF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArAL 164 (250)
T COG0411 90 LFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARAL 164 (250)
T ss_pred ccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHH
Confidence 9999999999988754321 11 11245566788999999999999999865 6999999999999999
Q ss_pred hhCCCCccccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCc
Q 000753 1022 VANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1302)
Q Consensus 1022 ~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~ 1094 (1302)
+.+|++|+||||.+||.+.....+.+.|+++.+ .|.||+++-|+++ -++..||++++|.. |+++..|++.+
T Consensus 165 a~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~-~Vm~l~dri~Vl~~-G~~IAeG~P~e 236 (250)
T COG0411 165 ATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMK-LVMGLADRIVVLNY-GEVIAEGTPEE 236 (250)
T ss_pred hcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccH-HHhhhccEEEeccC-CcCcccCCHHH
Confidence 999999999999999999999999999999987 4699999999998 48899999999985 89999999753
No 150
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-36 Score=316.56 Aligned_cols=208 Identities=25% Similarity=0.356 Sum_probs=174.5
Q ss_pred ccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc----cceEEEEccCCCCC
Q 000753 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHH 257 (1302)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 257 (1302)
.+.++|+|||+++++||+++|+||||+||||||++|+|..++. +|+|.++|++++...+ ++.++||||....|
T Consensus 14 G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF 90 (237)
T COG0410 14 GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIF 90 (237)
T ss_pred cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccch
Confidence 3467999999999999999999999999999999999999886 9999999999987765 36799999999999
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcC-Cccccccccc
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILG-LDICADTMVG 336 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg 336 (1302)
|.|||+|||..++....... . ... ..|.+.+.|= |.+..++.-|
T Consensus 91 ~~LTVeENL~~g~~~~~~~~------------~-----~~~------------------~~e~v~~lFP~Lker~~~~aG 135 (237)
T COG0410 91 PRLTVEENLLLGAYARRDKE------------A-----QER------------------DLEEVYELFPRLKERRNQRAG 135 (237)
T ss_pred hhCcHHHHHhhhhhcccccc------------c-----ccc------------------cHHHHHHHChhHHHHhcCccc
Confidence 99999999998654321100 0 000 0233333332 4455667777
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEE
Q 000753 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1302)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iil 416 (1302)
+ |||||+|-++|||||+++|++|+|||||.||-|.-..+|.+.++++.+..+ ..|+.+.|......+++|+.++
T Consensus 136 ~-----LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g-~tIlLVEQn~~~Al~iaDr~yv 209 (237)
T COG0410 136 T-----LSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGG-MTILLVEQNARFALEIADRGYV 209 (237)
T ss_pred C-----CChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCC-cEEEEEeccHHHHHHhhCEEEE
Confidence 7 999999999999999999999999999999999999999999999997655 4455568999999999999999
Q ss_pred ecCCeEEEEcChhHHHH
Q 000753 417 LSEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 417 L~~G~iv~~G~~~~~~~ 433 (1302)
|.+|+|++.|+.+++.+
T Consensus 210 le~Griv~~G~~~eL~~ 226 (237)
T COG0410 210 LENGRIVLSGTAAELLA 226 (237)
T ss_pred EeCCEEEEecCHHHHhc
Confidence 99999999999998864
No 151
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.7e-36 Score=306.79 Aligned_cols=202 Identities=26% Similarity=0.391 Sum_probs=175.8
Q ss_pred ccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCCC
Q 000753 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDL 255 (1302)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~ 255 (1302)
...++|+|||+.|++||++-|+||||||||||||+|.+...|+ +|+|.+||+++.... .+|.||+|+|+..
T Consensus 13 ~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~r 89 (223)
T COG2884 13 GGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFR 89 (223)
T ss_pred CCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecc
Confidence 3466999999999999999999999999999999999999997 999999999986543 3689999999999
Q ss_pred CCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccc
Q 000753 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1302)
Q Consensus 256 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1302)
+++..||.||++|+.+..|... .+.+..+..+|+..||.+.++...
T Consensus 90 LL~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~~lP 135 (223)
T COG2884 90 LLPDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKHKARALP 135 (223)
T ss_pred ccccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccchhhhcCc
Confidence 9999999999999988766421 112335677999999999998887
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEE
Q 000753 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1302)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ii 415 (1302)
-. |||||+|||+||||++.+|++|+-||||-.||+..+.+|++.+.++.+ .|+|++++.|. ..-+-.+--+++
T Consensus 136 ~~-----LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr-~GtTVl~ATHd-~~lv~~~~~rvl 208 (223)
T COG2884 136 SQ-----LSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR-LGTTVLMATHD-LELVNRMRHRVL 208 (223)
T ss_pred cc-----cCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh-cCcEEEEEecc-HHHHHhccCcEE
Confidence 66 999999999999999999999999999999999999999999999876 58888888764 344555667999
Q ss_pred EecCCeEEEEcC
Q 000753 416 LLSEGQIVYQGP 427 (1302)
Q Consensus 416 lL~~G~iv~~G~ 427 (1302)
.|++|+++....
T Consensus 209 ~l~~Grl~~d~~ 220 (223)
T COG2884 209 ALEDGRLVRDES 220 (223)
T ss_pred EEeCCEEEeccc
Confidence 999999987643
No 152
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-36 Score=346.41 Aligned_cols=219 Identities=23% Similarity=0.309 Sum_probs=179.0
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|+++.++.. ......+|+|||++|++||++||+||||||||||+++|+|...+ ..|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKK--------LPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCC--------CCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 6788888776311 00123599999999999999999999999999999999997653 4699999876531
Q ss_pred ---------------------------hhhhcceeEEeccCC-CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHH
Q 000753 935 ---------------------------QETFARVSGYCEQND-IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVM 986 (1302)
Q Consensus 935 ---------------------------~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l 986 (1302)
....++.+|||+|++ ..+...||+||+.|..... ..+.++..+.+.+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 123467799999986 2334579999998865432 234445566789999
Q ss_pred HHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 000753 987 ELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1065 (1302)
Q Consensus 987 ~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~ 1065 (1302)
+.++|. +..++. +..||||||||++||++|+.+|++|||||||+|||+.++..+++.|+++++.|+|||++||+
T Consensus 150 ~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 566665 45799999999999999999999999999999999999999999999998779999999999
Q ss_pred ccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1066 PSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1066 ~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
++ .+.+.||++++|++ |++++.|++.
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~~ 250 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDTY 250 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 76 57788999999985 7999998853
No 153
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-36 Score=342.15 Aligned_cols=215 Identities=27% Similarity=0.362 Sum_probs=178.8
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.++ +...+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 367788876552 12359999999999999999999999999999999999765 3479999999876
Q ss_pred Ch---hhhcceeEEeccCCC-CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000753 934 NQ---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1302)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1302)
.. ...++.+||++|++. .++..||.||+.|..... ........+.+.++++.++|.+..++.+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 43 234567999999973 445689999998764321 2333444556889999999988777764 57999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000753 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1302)
Q Consensus 1010 GqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~ 1089 (1302)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ .+.+.||++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999976 46678999999985 789998
Q ss_pred cCC
Q 000753 1090 GPL 1092 (1302)
Q Consensus 1090 g~~ 1092 (1302)
|++
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 875
No 154
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=5.3e-36 Score=340.41 Aligned_cols=215 Identities=21% Similarity=0.300 Sum_probs=179.2
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++ ++.+|+||||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 467888876542 3469999999999999999999999999999999999765 3479999999875
Q ss_pred Ch------hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000753 934 NQ------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGL 1007 (1302)
Q Consensus 934 ~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~L 1007 (1302)
.. ...++.++|++|++.+++.+||.||+.+...... ....+...+.+.++++.+++.+..+.. +..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLM-----PSEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCC-----hhhC
Confidence 42 1235679999999999999999999987543211 122333445678899999998877776 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEE
Q 000753 1008 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1302)
Q Consensus 1008 SgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~ 1086 (1302)
|||||||++||++|+.+|++|||||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+.||++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998754 899999999975 57778999999985 899
Q ss_pred EEecCC
Q 000753 1087 IYAGPL 1092 (1302)
Q Consensus 1087 ~~~g~~ 1092 (1302)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 998875
No 155
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-36 Score=337.49 Aligned_cols=201 Identities=26% Similarity=0.370 Sum_probs=171.6
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh---hhhcceeEEeccCCCCCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYVT 956 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 956 (1302)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +..|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 469999999999999999999999999999999999765 347999999987532 234567999999999999999
Q ss_pred HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 000753 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS--LNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1302)
Q Consensus 957 v~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPT 1034 (1302)
|+||+.+...++. ...+...+.+.++++.+++.+ ..++. ++.||||||||++|||||+.+|++|+|||||
T Consensus 92 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 163 (242)
T cd03295 92 VEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRY-----PHELSGGQQQRVGVARALAADPPLLLMDEPF 163 (242)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 9999987654331 223344556889999999985 55555 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1035 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 164 ~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 220 (242)
T cd03295 164 GALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQVGTP 220 (242)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999999764 899999999986 56788999999985 789888874
No 156
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.9e-36 Score=339.54 Aligned_cols=205 Identities=26% Similarity=0.309 Sum_probs=169.9
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh------hhhcceeEEeccCCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHSP 953 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 953 (1302)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.+||++|++.+++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 92 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIE 92 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccc
Confidence 469999999999999999999999999999999999765 347999999987532 124567999999999999
Q ss_pred CCCHHHHHHHHHHhh-----CCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 000753 954 YVTVYESLLYSAWLR-----LSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII 1028 (1302)
Q Consensus 954 ~lTv~E~l~~~~~lr-----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~il 1028 (1302)
.+||+||+.+..... ...........+.+.++++.+++.+..+.. +..||||||||++|||||+.+|++|
T Consensus 93 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~ll 167 (243)
T TIGR02315 93 RLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR-----ADQLSGGQQQRVAIARALAQQPDLI 167 (243)
T ss_pred cccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999997642110 000111223345688999999998776665 4579999999999999999999999
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1029 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1029 lLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
+|||||+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.||++++|.+ |++++.|+..
T Consensus 168 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 231 (243)
T TIGR02315 168 LADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA-GEIVFDGAPS 231 (243)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecCCHH
Confidence 999999999999999999999998654 899999999986 46678999999985 7888888753
No 157
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-36 Score=319.06 Aligned_cols=204 Identities=26% Similarity=0.316 Sum_probs=175.1
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC----ccceEEEEccCC--CCCC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV----PQRTCAYISQHD--LHHG 258 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d--~~~~ 258 (1302)
++|+|||+++.+||..+|+|+||||||||.++|+|..+|+ +|+|.++|.+..... ..+.+-+|+||+ .+.|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 6999999999999999999999999999999999999997 999999998776543 357899999997 6789
Q ss_pred CCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc-cccccccC
Q 000753 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI-CADTMVGD 337 (1302)
Q Consensus 259 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~vg~ 337 (1302)
..||++.|.-+.+..+... .+..+.++++.+||+. .++...-+
T Consensus 98 ~~tv~~~l~Epl~~~~~~~------------------------------------~~~~i~~~L~~VgL~~~~l~R~P~e 141 (252)
T COG1124 98 RRTVGRILSEPLRPHGLSK------------------------------------SQQRIAELLDQVGLPPSFLDRRPHE 141 (252)
T ss_pred chhHHHHHhhhhccCCccH------------------------------------HHHHHHHHHHHcCCCHHHHhcCchh
Confidence 9999999976544322110 1112567899999986 45666654
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
|||||||||+|||||..+|++|++|||||+||++.+.+|++.|.++.+..+-|.++.. |...-+..+||||++|
T Consensus 142 -----LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~Is-Hdl~~v~~~cdRi~Vm 215 (252)
T COG1124 142 -----LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFIS-HDLALVEHMCDRIAVM 215 (252)
T ss_pred -----cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEe-CcHHHHHHHhhheeee
Confidence 9999999999999999999999999999999999999999999999998877777665 5566889999999999
Q ss_pred cCCeEEEEcChhHHHH
Q 000753 418 SEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 418 ~~G~iv~~G~~~~~~~ 433 (1302)
++|++++.++.+++..
T Consensus 216 ~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 216 DNGQIVEIGPTEELLS 231 (252)
T ss_pred eCCeEEEeechhhhhc
Confidence 9999999999999864
No 158
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-36 Score=321.43 Aligned_cols=222 Identities=24% Similarity=0.346 Sum_probs=186.6
Q ss_pred cccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCcc----ceEEEEccCCCC
Q 000753 181 KRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ----RTCAYISQHDLH 256 (1302)
Q Consensus 181 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~ 256 (1302)
-....+++|||+++++|++++|+||||||||||+|+|+|.++|+ +|+|.++|++++...++ ..++.-+|+..+
T Consensus 14 FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rl 90 (250)
T COG0411 14 FGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRL 90 (250)
T ss_pred cCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeecccccc
Confidence 35678999999999999999999999999999999999999998 99999999999887654 468889999999
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccccccccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 336 (1302)
|++|||-||+..++..+.. +.......+-. ....+.......+|+.+||.+.+|+..|
T Consensus 91 F~~lTVlENv~va~~~~~~---~~~~l~~~~~~-------------------~~e~~~~e~A~~~Le~vgL~~~a~~~A~ 148 (250)
T COG0411 91 FPGLTVLENVAVGAHARLG---LSGLLGRPRAR-------------------KEEREARERARELLEFVGLGELADRPAG 148 (250)
T ss_pred cCCCcHHHHHHHHhhhhhh---hhhhhccccch-------------------hhHHHHHHHHHHHHHHcCCchhhcchhh
Confidence 9999999999988664421 00000000000 0001123345779999999999999999
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEE
Q 000753 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1302)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iil 416 (1302)
+ ||+||+||+.|||||+.+|++|+||||.+||.+..+.++.+.++++.+..+.|++++- |...-++.+||+|+|
T Consensus 149 ~-----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIE-HdM~~Vm~l~dri~V 222 (250)
T COG0411 149 N-----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIE-HDMKLVMGLADRIVV 222 (250)
T ss_pred c-----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEE-eccHHHhhhccEEEe
Confidence 8 9999999999999999999999999999999999999999999999986567766665 556789999999999
Q ss_pred ecCCeEEEEcChhHHHH
Q 000753 417 LSEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 417 L~~G~iv~~G~~~~~~~ 433 (1302)
|+.|+++.+|+++++.+
T Consensus 223 l~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 223 LNYGEVIAEGTPEEVRN 239 (250)
T ss_pred ccCCcCcccCCHHHHhc
Confidence 99999999999999864
No 159
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-36 Score=350.15 Aligned_cols=206 Identities=26% Similarity=0.365 Sum_probs=177.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc------cceEEEEccCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------QRTCAYISQHDLHH 257 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 257 (1302)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 56999999999999999999999999999999999999987 9999999998765321 46799999999999
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
+.+||+||+.|.....+.. . .+ ....++.+++.+||++..++.+++
T Consensus 95 ~~~tv~eni~~~~~~~~~~----------~----------~~--------------~~~~~~~~l~~~gL~~~~~~~~~~ 140 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTP----------K----------AE--------------IKARVTELLELVGLSDKADRYPAQ 140 (343)
T ss_pred CCCcHHHHHHHHHHHcCCC----------H----------HH--------------HHHHHHHHHHHcCCchhhhCChhh
Confidence 9999999998865432210 0 00 012346688999999888888876
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.++||+|++|
T Consensus 141 -----LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~-~~i~~~~d~v~~l 214 (343)
T PRK11153 141 -----LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEM-DVVKRICDRVAVI 214 (343)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999999876678888887765 4788899999999
Q ss_pred cCCeEEEEcChhHHH
Q 000753 418 SEGQIVYQGPRDNVL 432 (1302)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1302)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999988774
No 160
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=5.3e-36 Score=331.16 Aligned_cols=209 Identities=25% Similarity=0.317 Sum_probs=173.5
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|+++.++ +++.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 45677766541 12469999999999999999999999999999999999765 34799999998753
Q ss_pred h---h---hhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000753 935 Q---E---TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1302)
Q Consensus 935 ~---~---~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1302)
. . .+++.++|++|++.+++.+|+.||+.+....+ ....++..+.++++++.+++.+..++. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNF-----PIQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----chhCC
Confidence 2 1 24567999999998888999999998865432 122334445678899999998776665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEE
Q 000753 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1302)
Q Consensus 1009 gGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~ 1087 (1302)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|.|||++||+++ ++...+|++++|++ |+++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~ 216 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHLH 216 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEc
Confidence 99999999999999999999999999999999999999999999777899999999986 56677999999986 6653
No 161
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-36 Score=344.02 Aligned_cols=217 Identities=24% Similarity=0.302 Sum_probs=178.0
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
++++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67888887763110 012459999999999999999999999999999999999765 34799999998763
Q ss_pred -------hhhhcceeEEeccCC--CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000753 935 -------QETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGV 1004 (1302)
Q Consensus 935 -------~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 1004 (1302)
....++.+|||+|++ .++ ..||.||+.|..... ....++..+.++++++.++|. +..++. +
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLF-EETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----P 143 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhh-hhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----c
Confidence 123556799999986 344 479999998875322 223444456789999999996 556665 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecC
Q 000753 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1302)
Q Consensus 1005 ~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~g 1083 (1302)
..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.||++++|++
T Consensus 144 ~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~- 221 (290)
T PRK13634 144 FELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK- 221 (290)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999764 899999999986 57788999999985
Q ss_pred cEEEEecCC
Q 000753 1084 GRVIYAGPL 1092 (1302)
Q Consensus 1084 G~~~~~g~~ 1092 (1302)
|++++.|++
T Consensus 222 G~i~~~g~~ 230 (290)
T PRK13634 222 GTVFLQGTP 230 (290)
T ss_pred CEEEEECCH
Confidence 899999875
No 162
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-36 Score=343.04 Aligned_cols=218 Identities=25% Similarity=0.357 Sum_probs=179.0
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
++++|+++.++.. ....+.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPN--------SPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 5678888776310 0011359999999999999999999999999999999999765 34799999998763
Q ss_pred h-------hhhcceeEEeccCC--CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000753 935 Q-------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGV 1004 (1302)
Q Consensus 935 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 1004 (1302)
. ..+++.+|||+|++ .+++ .||.|++.|..... ..+..+.++.+.++++.++|. +..++. +
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~ 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----P 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----c
Confidence 1 23567899999986 4444 69999999875432 233445566789999999995 455554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000753 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1302)
Q Consensus 1005 ~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG 1084 (1302)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999985 56678999999985 8
Q ss_pred EEEEecCCC
Q 000753 1085 RVIYAGPLG 1093 (1302)
Q Consensus 1085 ~~~~~g~~~ 1093 (1302)
++++.|++.
T Consensus 221 ~i~~~g~~~ 229 (288)
T PRK13643 221 HIISCGTPS 229 (288)
T ss_pred EEEEECCHH
Confidence 999999863
No 163
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.7e-36 Score=333.60 Aligned_cols=199 Identities=31% Similarity=0.452 Sum_probs=167.4
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh---hh-hcceeEEeccCCCCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ET-FARVSGYCEQNDIHSPYV 955 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~-~~~~~gyv~Q~~~~~~~l 955 (1302)
+.+|+|+||++++||++||+||||||||||+++|+|... +..|+|.++|.+... .. .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 469999999999999999999999999999999999765 347999999987532 11 245699999999999999
Q ss_pred CHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 000753 956 TVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELV-ELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1302)
Q Consensus 956 Tv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPT 1034 (1302)
|++||+.+...... .....+.+.++++.+ ++.+..++. +..||||||||++|||||+.+|++|+|||||
T Consensus 91 t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 160 (222)
T cd03224 91 TVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGGEQQMLAIARALMSRPKLLLLDEPS 160 (222)
T ss_pred cHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 99999988654321 112234567778887 466655655 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
+|||+.++..+++.|++++++|+|||++||+++ ++...||++++|++ |+++..|+.
T Consensus 161 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (222)
T cd03224 161 EGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEGTA 216 (222)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeCCH
Confidence 999999999999999999877899999999986 56788999999985 789888764
No 164
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=7.7e-36 Score=332.94 Aligned_cols=200 Identities=31% Similarity=0.443 Sum_probs=168.9
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh--hhhcceeEEeccCCCCCCCCCH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1302)
+.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.++.. ....+.++|++|++.+++.+|+
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~ 91 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSV 91 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcH
Confidence 469999999999999999999999999999999999765 347999999987532 1223579999999988889999
Q ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 000753 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1302)
Q Consensus 958 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgL 1037 (1302)
+||+.+....+ ....+...+.+.++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+||
T Consensus 92 ~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEP~~~L 163 (236)
T TIGR03864 92 RQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHRRRVEIARALLHRPALLLLDEPTVGL 163 (236)
T ss_pred HHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCC
Confidence 99998765432 1223334456889999999987766653 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1038 DARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1038 D~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
|+.++..+.+.|+++++ +|+|||++||+++ ++ ..+|++++|++ |++++.|+.
T Consensus 164 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~i~~l~~-G~i~~~~~~ 216 (236)
T TIGR03864 164 DPASRAAIVAHVRALCRDQGLSVLWATHLVD-EI-EADDRLVVLHR-GRVLADGAA 216 (236)
T ss_pred CHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hH-hhCCEEEEEeC-CeEEEeCCH
Confidence 99999999999999874 5899999999986 34 45999999985 788888874
No 165
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.4e-36 Score=331.80 Aligned_cols=199 Identities=30% Similarity=0.448 Sum_probs=163.7
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChhhhcceeEEeccCCCCC--CCCCH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHS--PYVTV 957 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~lTv 957 (1302)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.. ..++.++|++|++.+. ..+||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 469999999999999999999999999999999999765 34799999998653 3456799999998763 34899
Q ss_pred HHHHHHHHHhhCC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 000753 958 YESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1036 (1302)
Q Consensus 958 ~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsg 1036 (1302)
+||+.+....... .....+...+.++++++.+++.+..++. +..||||||||++||+||+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQ-----IGELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 0011123345688999999998776665 347999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1037 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1037 LD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999999877999999999986 56678999999974 5 55543
No 166
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.4e-34 Score=360.48 Aligned_cols=218 Identities=28% Similarity=0.442 Sum_probs=179.8
Q ss_pred cccCCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEE
Q 000753 848 LPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIK 927 (1302)
Q Consensus 848 ~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~ 927 (1302)
.+.-+..++|+|++|.++. +...+|+|+|++|+|||.+||+|+||||||||+|+|.|..+ +..|+|.
T Consensus 465 ~~~~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~ 531 (709)
T COG2274 465 LPKLQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRIL 531 (709)
T ss_pred ccccCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEE
Confidence 4445678999999998753 22369999999999999999999999999999999999876 4589999
Q ss_pred EcCccCC---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc-------ccc
Q 000753 928 ISGYPKN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDS 997 (1302)
Q Consensus 928 i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~ 997 (1302)
+||++.+ ...+|+.+|||+|++.++. -|++||+.++. .+.+. +.+.++++..+..+. .++
T Consensus 532 ~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~----e~i~~A~~~ag~~~fI~~lP~gy~t 601 (709)
T COG2274 532 LDGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATD----EEIIEAAQLAGAHEFIENLPMGYDT 601 (709)
T ss_pred ECCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCH----HHHHHHHHHhCcHHHHHhccccccc
Confidence 9999864 4678899999999998874 59999998753 22222 224444544444332 345
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeE
Q 000753 998 MVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL 1077 (1302)
Q Consensus 998 ~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i 1077 (1302)
.+|.. ..+||||||||++|||||+++|+||+||||||+||+.+++.|++.|++.. .|+|+|+++|+++ ....||++
T Consensus 602 ~v~E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrI 677 (709)
T COG2274 602 PVGEG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRI 677 (709)
T ss_pred ccccC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEE
Confidence 55543 45799999999999999999999999999999999999999999999986 5899999999975 67899999
Q ss_pred EEEecCcEEEEecCCC
Q 000753 1078 LLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1078 ~~l~~gG~~~~~g~~~ 1093 (1302)
++|++ |+++..|+..
T Consensus 678 iVl~~-Gkiv~~gs~~ 692 (709)
T COG2274 678 IVLDQ-GKIVEQGSHE 692 (709)
T ss_pred EEccC-CceeccCCHH
Confidence 99985 8999999963
No 167
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.2e-36 Score=330.34 Aligned_cols=193 Identities=26% Similarity=0.388 Sum_probs=162.6
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh---hhhcceeEEeccCCC-CCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDI-HSPYV 955 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 955 (1302)
+.+|+|+||++++||++||+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 569999999999999999999999999999999999765 347999999986532 334567999999975 36678
Q ss_pred CHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCC
Q 000753 956 TVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1035 (1302)
Q Consensus 956 Tv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTs 1035 (1302)
|++||+.+..... ........+.++++++.++|.+..++. +..||||||||++|||||+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRS-----PFTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998764332 122233345678899999998776665 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000753 1036 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1302)
Q Consensus 1036 gLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~g 1083 (1302)
|||+.++..+++.|++++++|+|||++||+++ ++...||++++|.+|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999975 566679999999863
No 168
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-36 Score=338.14 Aligned_cols=200 Identities=29% Similarity=0.419 Sum_probs=170.4
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChhhhcceeEEeccCCCCCCCCCHHH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1302)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ....+||++|++.+++.+||.|
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~e 89 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQD 89 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHHH
Confidence 469999999999999999999999999999999999765 347999999987642 2345899999999999999999
Q ss_pred HHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCH
Q 000753 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1302)
Q Consensus 960 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~ 1039 (1302)
|+.+....+ .....+..+.+.++++.++|.+..++. +..||||||||++||++|+.+|++|||||||+|||+
T Consensus 90 ~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~ 161 (255)
T PRK11248 90 NVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDA 161 (255)
T ss_pred HHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCH
Confidence 998764332 122334455688999999998776665 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEec-CcEEEEecCC
Q 000753 1040 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKR-GGRVIYAGPL 1092 (1302)
Q Consensus 1040 ~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~-gG~~~~~g~~ 1092 (1302)
.++..+.+.|+++++ .|+|||++||+++ ++...||++++|++ +|+++..++.
T Consensus 162 ~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 162 FTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999854 5899999999986 57788999999985 5899887764
No 169
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-36 Score=346.38 Aligned_cols=218 Identities=23% Similarity=0.348 Sum_probs=179.1
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.++.. ....+.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~--------~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEK--------QENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 57899998876411 0012359999999999999999999999999999999999765 3479999999765
Q ss_pred Ch-------------------hhhcceeEEeccCC--CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc
Q 000753 934 NQ-------------------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK 992 (1302)
Q Consensus 934 ~~-------------------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~ 992 (1302)
.. ..+++.+|||+|++ .+++ .||+||+.|..... ..+.++..+.+.++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 23567899999987 3554 59999998864321 223444456788999999996
Q ss_pred -ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHH
Q 000753 993 -SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1071 (1302)
Q Consensus 993 -~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~ 1071 (1302)
+..++. +.+||||||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++|+|||++||+++ .+.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455554 4579999999999999999999999999999999999999999999998777999999999975 466
Q ss_pred HhcCeEEEEecCcEEEEecCC
Q 000753 1072 EAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1072 ~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
+.||++++|++ |++++.|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 78999999985 899999985
No 170
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=6.2e-36 Score=332.11 Aligned_cols=200 Identities=25% Similarity=0.300 Sum_probs=163.4
Q ss_pred eeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh------hhhcceeEEeccCC--CCC
Q 000753 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQND--IHS 952 (1302)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~~~ 952 (1302)
.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.++.. ..+++.+||++|++ .++
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLN 96 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEccccchhhHHHhhccEEEEecCchhhcC
Confidence 69999999999999999999999999999999999765 347999999987642 23456899999998 466
Q ss_pred CCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcccc
Q 000753 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1302)
Q Consensus 953 ~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLD 1031 (1302)
+.+||+||+.+....... ....+.....++++++.+++. +..+.. +..||||||||++|||+|+.+|++|+||
T Consensus 97 ~~~tv~~nl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLD 170 (228)
T cd03257 97 PRMTIGEQIAEPLRIHGK-LSKKEARKEAVLLLLVGVGLPEEVLNRY-----PHELSGGQRQRVAIARALALNPKLLIAD 170 (228)
T ss_pred CcCCHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHCCCChhHhhCC-----chhcCHHHHHHHHHHHHHhcCCCEEEec
Confidence 789999999876543321 111111122235888999985 455555 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1032 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
|||+|||+.++..+.+.|++++++ |+|||++||+++ ++...||++++|++ |+++..|
T Consensus 171 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 228 (228)
T cd03257 171 EPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-GKIVEEG 228 (228)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-CEEEecC
Confidence 999999999999999999999765 899999999986 46668999999985 7877654
No 171
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-36 Score=329.83 Aligned_cols=205 Identities=28% Similarity=0.412 Sum_probs=173.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC--CccceEEEEccCCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF--VPQRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lT 261 (1302)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 46999999999999999999999999999999999999887 99999999876432 12357999999999999999
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
|+||+.+..+..+.. . . +....++.+++.+||++..++.+++
T Consensus 90 v~~~l~~~~~~~~~~----------~----------~--------------~~~~~~~~~l~~~~l~~~~~~~~~~---- 131 (220)
T cd03265 90 GWENLYIHARLYGVP----------G----------A--------------ERRERIDELLDFVGLLEAADRLVKT---- 131 (220)
T ss_pred HHHHHHHHHHHcCCC----------H----------H--------------HHHHHHHHHHHHcCCHHHhhCChhh----
Confidence 999998864322110 0 0 0112356789999999888888876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|.+|+
T Consensus 132 -LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~-~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 132 -YSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYM-EEAEQLCDRVAIIDHGR 209 (220)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999999999999999998775567877776665 57888999999999999
Q ss_pred EEEEcChhHH
Q 000753 422 IVYQGPRDNV 431 (1302)
Q Consensus 422 iv~~G~~~~~ 431 (1302)
++..|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03265 210 IIAEGTPEEL 219 (220)
T ss_pred EEEeCChHHc
Confidence 9999987653
No 172
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1e-35 Score=336.25 Aligned_cols=215 Identities=21% Similarity=0.281 Sum_probs=178.6
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.++ .+.+|+|||++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEc
Confidence 367788876542 2469999999999999999999999999999999999765 3479999999765
Q ss_pred Ch----------------hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccc-c
Q 000753 934 NQ----------------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-D 996 (1302)
Q Consensus 934 ~~----------------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-~ 996 (1302)
.. ..+++.++|++|++.+++.+||+||+.+...... ........+.+.++++.+++.+.. +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~ 147 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQG 147 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 31 2345679999999999999999999987542111 122334456688999999997653 4
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCe
Q 000753 997 SMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDE 1076 (1302)
Q Consensus 997 ~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~ 1076 (1302)
.. +..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++...||+
T Consensus 148 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~ 221 (257)
T PRK10619 148 KY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSH 221 (257)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 44 4579999999999999999999999999999999999999999999999877999999999986 56667999
Q ss_pred EEEEecCcEEEEecCC
Q 000753 1077 LLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1077 i~~l~~gG~~~~~g~~ 1092 (1302)
+++|++ |++++.|+.
T Consensus 222 i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 222 VIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEC-CEEEEeCCH
Confidence 999985 789888874
No 173
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-36 Score=328.30 Aligned_cols=200 Identities=31% Similarity=0.436 Sum_probs=169.0
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC-ccceEEEEccCCCCCCCCCH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-PQRTCAYISQHDLHHGEMTV 262 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV 262 (1302)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 46999999999999999999999999999999999999887 999999999875432 24579999999999999999
Q ss_pred HHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCC
Q 000753 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1302)
Q Consensus 263 rE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1302)
+||+.++....+.. .. .....++.+++.+||++..++.+++
T Consensus 90 ~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (213)
T cd03259 90 AENIAFGLKLRGVP----------KA------------------------EIRARVRELLELVGLEGLLNRYPHE----- 130 (213)
T ss_pred HHHHHhHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhcChhh-----
Confidence 99998754321100 00 0011245678899999888888876
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeE
Q 000753 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1302)
Q Consensus 343 LSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~i 422 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++ .++.+++|+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQ-EEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCH-HHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998765577888877665 477889999999999999
Q ss_pred EEEc
Q 000753 423 VYQG 426 (1302)
Q Consensus 423 v~~G 426 (1302)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 174
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-36 Score=329.38 Aligned_cols=197 Identities=35% Similarity=0.513 Sum_probs=167.5
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh--hhhcceeEEeccCCCCCCCCCH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1302)
..+|+|+||++++| +++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 46999999999999 999999999999999999999765 357999999987542 2345679999999999999999
Q ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 000753 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1302)
Q Consensus 958 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgL 1037 (1302)
.||+.+....+. ....+..+.++++++.+++.+..+.. +..||||||||++|||||+.+|++|+|||||+||
T Consensus 90 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 161 (211)
T cd03264 90 REFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKK-----IGSLSGGMRRRVGIAQALVGDPSILIVDEPTAGL 161 (211)
T ss_pred HHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999988654431 22233345688999999998776665 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
|+.++..+.+.|+++++ +.|||++||+++ .+.+.+|++++|++ |++++.|
T Consensus 162 D~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 162 DPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred CHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999976 599999999976 46678999999985 7887654
No 175
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=3.7e-36 Score=330.32 Aligned_cols=195 Identities=25% Similarity=0.360 Sum_probs=165.9
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh-----hhhcceeEEeccCCCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-----ETFARVSGYCEQNDIHSPY 954 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~ 954 (1302)
+.+|+++||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPH 90 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccchhHHHHHhcceEEecccccCCC
Confidence 469999999999999999999999999999999999765 347999999987631 2346789999999999999
Q ss_pred CCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 000753 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1302)
Q Consensus 955 lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPT 1034 (1302)
+|+.||+.+...... ....++..+.++++++.+++.+..++. +..||||||||++||+||+.+|++|+|||||
T Consensus 91 ~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEP~ 163 (213)
T cd03262 91 LTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAY-----PAQLSGGQQQRVAIARALAMNPKVMLFDEPT 163 (213)
T ss_pred CcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhC-----ccccCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 999999987642111 122333445688999999998776766 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000753 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1302)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~ 1085 (1302)
+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++ |+
T Consensus 164 ~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 164 SALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred cCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 999999999999999999877999999999986 56678999999986 54
No 176
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.1e-35 Score=345.49 Aligned_cols=230 Identities=20% Similarity=0.226 Sum_probs=183.2
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|++..++............+...+|+|||++|++||++||+|+||||||||+++|+|.... .+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEEC
Confidence 478888887664211000000011235799999999999999999999999999999999997653 479999999876
Q ss_pred Ch------hhhcceeEEeccCC--CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000753 934 NQ------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGV 1004 (1302)
Q Consensus 934 ~~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 1004 (1302)
.. ..+++.++||+|++ .++|.+||.|++.+...... ...+.++.++.+.++++.++|. +..++. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~-~~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYH-PKLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 42 12456799999998 58889999999988654321 1234455566788999999994 345555 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecC
Q 000753 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1302)
Q Consensus 1005 ~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~g 1083 (1302)
..||||||||++|||||+.+|++||+||||+|||+.++..|++.|+++.++ |.|||++|||++ .+.+.+|++++|.+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999764 899999999976 46678999999985
Q ss_pred cEEEEecCCC
Q 000753 1084 GRVIYAGPLG 1093 (1302)
Q Consensus 1084 G~~~~~g~~~ 1093 (1302)
|++++.|+..
T Consensus 238 G~ive~g~~~ 247 (331)
T PRK15079 238 GHAVELGTYD 247 (331)
T ss_pred CEEEEEcCHH
Confidence 8999999853
No 177
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1e-35 Score=334.22 Aligned_cols=202 Identities=26% Similarity=0.345 Sum_probs=169.2
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc---eeEEEEEEcCccCCh-----hhhcceeEEeccCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISGYPKNQ-----ETFARVSGYCEQNDIH 951 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~ 951 (1302)
..+|+|+|++|++||+++|+|+||||||||+++|+|...+. ..+|+|.++|.+... ...++.++|++|++.+
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 93 (247)
T TIGR00972 14 KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNP 93 (247)
T ss_pred eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCccc
Confidence 45999999999999999999999999999999999976421 127999999987642 2345679999999988
Q ss_pred CCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc----ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCC
Q 000753 952 SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK----SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSI 1027 (1302)
Q Consensus 952 ~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~i 1027 (1302)
++ .|++||+.+....+. .....+..+.++++++.++|. +..+.. +..||||||||++|||||+.+|++
T Consensus 94 ~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~p~l 165 (247)
T TIGR00972 94 FP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS-----ALGLSGGQQQRLCIARALAVEPEV 165 (247)
T ss_pred CC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC-----cccCCHHHHHHHHHHHHHhcCCCE
Confidence 88 999999988654331 112334456688999999997 444544 457999999999999999999999
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1028 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1028 llLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
|+|||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 166 lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (247)
T TIGR00972 166 LLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD-GELVEYGPT 227 (247)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999876 499999999986 56778999999986 789888874
No 178
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-36 Score=340.79 Aligned_cols=216 Identities=26% Similarity=0.384 Sum_probs=180.0
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.++ +++.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 578888887652 12469999999999999999999999999999999999765 3579999999876
Q ss_pred C-----hhhhcceeEEeccCCC-CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000753 934 N-----QETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGL 1007 (1302)
Q Consensus 934 ~-----~~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~L 1007 (1302)
. ...+++.+||++|++. .+...||+||+.+..... ..+..+..+.++++++.++|.+..++. +..|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----cccC
Confidence 3 1235677999999974 234579999998764322 223344456789999999998877776 4579
Q ss_pred CHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEE
Q 000753 1008 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1302)
Q Consensus 1008 SgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~ 1086 (1302)
|||||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++...||++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999765 899999999986 46668999999986 789
Q ss_pred EEecCCC
Q 000753 1087 IYAGPLG 1093 (1302)
Q Consensus 1087 ~~~g~~~ 1093 (1302)
++.|+..
T Consensus 221 ~~~g~~~ 227 (283)
T PRK13636 221 ILQGNPK 227 (283)
T ss_pred EEeCCHH
Confidence 9999853
No 179
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-36 Score=335.43 Aligned_cols=214 Identities=28% Similarity=0.394 Sum_probs=178.5
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
++++|+++.+ +++.+|+|+||++++||++||+||||||||||+++|+|..+ +..|+|.++|.+..
T Consensus 4 l~~~~l~~~~-------------~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAY-------------KGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEe-------------CCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 5667776544 23469999999999999999999999999999999999765 34799999998753
Q ss_pred h----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000753 935 Q----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1302)
Q Consensus 935 ~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1302)
. ...++.++|++|++.+++.+||.||+.+...++. ....++....++++++.+++.+..+.. ++.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHH
Confidence 2 2235679999999999999999999987643321 122334455688999999998766665 4579999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1011 qrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.+++++++|+|||++||+++ ++...||++++|++ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998877999999999975 57788999999985 7898888
Q ss_pred CC
Q 000753 1091 PL 1092 (1302)
Q Consensus 1091 ~~ 1092 (1302)
++
T Consensus 220 ~~ 221 (241)
T PRK10895 220 TP 221 (241)
T ss_pred CH
Confidence 75
No 180
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=332.14 Aligned_cols=210 Identities=30% Similarity=0.440 Sum_probs=175.0
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-cceEEEEccCCCCCCCCCH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1302)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 45999999999999999999999999999999999999886 9999999988754332 4579999999999999999
Q ss_pred HHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCC
Q 000753 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1302)
Q Consensus 263 rE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1302)
+||+.|+....+...+ ++.+ +....++.+++.+||++..++.+++
T Consensus 92 ~e~l~~~~~~~~~~~~-----------------~~~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~----- 136 (239)
T cd03296 92 FDNVAFGLRVKPRSER-----------------PPEA-------------EIRAKVHELLKLVQLDWLADRYPAQ----- 136 (239)
T ss_pred HHHHhhhhhhcccccc-----------------CCHH-------------HHHHHHHHHHHHcCChhhhhcChhh-----
Confidence 9999886432211000 0000 0011345678999998888888776
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeE
Q 000753 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1302)
Q Consensus 343 LSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~i 422 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++..++|+|++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~-~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQ-EEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhCCEEEEEECCeE
Confidence 9999999999999999999999999999999999999999999999875578888887776 467889999999999999
Q ss_pred EEEcChhHHH
Q 000753 423 VYQGPRDNVL 432 (1302)
Q Consensus 423 v~~G~~~~~~ 432 (1302)
++.|+.+++.
T Consensus 216 ~~~~~~~~~~ 225 (239)
T cd03296 216 EQVGTPDEVY 225 (239)
T ss_pred EEecCHHHHh
Confidence 9999987763
No 181
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-36 Score=342.13 Aligned_cols=217 Identities=22% Similarity=0.341 Sum_probs=177.7
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
++++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i~ 72 (286)
T PRK13646 3 IRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITIT 72 (286)
T ss_pred EEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67788887663110 012359999999999999999999999999999999999765 34799999998763
Q ss_pred h-------hhhcceeEEeccCC--CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000753 935 Q-------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGV 1004 (1302)
Q Consensus 935 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 1004 (1302)
. ..+++.+|||+|++ .+++ .||.||+.|..... .....+..+.+.++++.+||. +..++. +
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (286)
T PRK13646 73 HKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS-----P 143 (286)
T ss_pred cccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 23567899999986 3444 59999998864322 233444556788999999996 566655 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000753 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1302)
Q Consensus 1005 ~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~g 1083 (1302)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ++.+.+|++++|++
T Consensus 144 ~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~- 221 (286)
T PRK13646 144 FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE- 221 (286)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 57999999999999999999999999999999999999999999999975 4899999999976 56678999999985
Q ss_pred cEEEEecCC
Q 000753 1084 GRVIYAGPL 1092 (1302)
Q Consensus 1084 G~~~~~g~~ 1092 (1302)
|++++.|++
T Consensus 222 G~i~~~g~~ 230 (286)
T PRK13646 222 GSIVSQTSP 230 (286)
T ss_pred CEEEEECCH
Confidence 799998875
No 182
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=337.28 Aligned_cols=208 Identities=23% Similarity=0.318 Sum_probs=176.3
Q ss_pred ccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-------cceEEEEccCC
Q 000753 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHD 254 (1302)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d 254 (1302)
..+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 4567999999999999999999999999999999999999887 9999999988754321 35799999999
Q ss_pred CCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccccccc
Q 000753 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTM 334 (1302)
Q Consensus 255 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 334 (1302)
.+++.+||+||+.+.....+... . .....++.+++.+||++..++.
T Consensus 112 ~~~~~~tv~e~l~~~~~~~~~~~--------------------~--------------~~~~~~~~~l~~~~l~~~~~~~ 157 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQGVPR--------------------A--------------EREERAAEALELVGLEGWEHKY 157 (269)
T ss_pred ccCCCCcHHHHHHHHHHhcCCCH--------------------H--------------HHHHHHHHHHHHcCCHhHhhCC
Confidence 99999999999988643221100 0 0011345688999999888888
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeE
Q 000753 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1302)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~i 414 (1302)
+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++
T Consensus 158 ~~~-----LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~-~~~~~~~d~v 231 (269)
T cd03294 158 PDE-----LSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDL-DEALRLGDRI 231 (269)
T ss_pred ccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhcCEE
Confidence 876 9999999999999999999999999999999999999999999998765578888887765 4778899999
Q ss_pred EEecCCeEEEEcChhHHH
Q 000753 415 ILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 415 ilL~~G~iv~~G~~~~~~ 432 (1302)
++|++|+++++|+.+++.
T Consensus 232 ~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 232 AIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 183
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-36 Score=341.13 Aligned_cols=216 Identities=24% Similarity=0.315 Sum_probs=180.1
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.++.. ..+.+|+|||++|++||++||+|+||||||||+++|+|... +..|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 36788888765310 12359999999999999999999999999999999999765 3479999999876
Q ss_pred Ch---hhhcceeEEeccCCC-CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000753 934 NQ---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1302)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1302)
.. ...++.+||++|++. .++..||+||+.|..... ....++..+.++++++.++|.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 42 345667999999974 667789999998864322 2334445567899999999988777764 47999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000753 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1302)
Q Consensus 1010 GqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~ 1088 (1302)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++ ..||++++|.+ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 999999999975 34 67999999985 89998
Q ss_pred ecCC
Q 000753 1089 AGPL 1092 (1302)
Q Consensus 1089 ~g~~ 1092 (1302)
.|++
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 8875
No 184
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=339.72 Aligned_cols=218 Identities=26% Similarity=0.392 Sum_probs=177.7
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC-----ccceEEEEccCCC-CC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-----PQRTCAYISQHDL-HH 257 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 257 (1302)
+++|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 46999999999999999999999999999999999999987 999999999886532 2467999999863 33
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc--ccccccc
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD--ICADTMV 335 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 335 (1302)
...||+||+.|+....+.. + .+....++++++.+||+ +..|+.+
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~~~ 142 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------E------------------------EEIENRVKRAMNIVGLDYEDYKDKSP 142 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------H------------------------HHHHHHHHHHHHHcCCCchhhccCCc
Confidence 4579999998854321110 0 00112356789999997 5677777
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEE
Q 000753 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1302)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ii 415 (1302)
.+ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++..+.|+|++.|+. .++..+||+|+
T Consensus 143 ~~-----LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~-~~~~~~~drv~ 216 (287)
T PRK13637 143 FE-----LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSM-EDVAKLADRII 216 (287)
T ss_pred cc-----CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEE
Confidence 65 9999999999999999999999999999999999999999999999875578888887764 57788999999
Q ss_pred EecCCeEEEEcChhHHHH---HHHhcCCCCCC
Q 000753 416 LLSEGQIVYQGPRDNVLE---FFEHMGFKCPE 444 (1302)
Q Consensus 416 lL~~G~iv~~G~~~~~~~---~f~~lG~~~p~ 444 (1302)
+|++|+++++|+.+++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988753 23344555443
No 185
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-36 Score=335.49 Aligned_cols=206 Identities=22% Similarity=0.299 Sum_probs=174.7
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 478888887552 2469999999999999999999999999999999999765 3479999998764
Q ss_pred ChhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000753 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1302)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1302)
. ..++.++|++|++.+++.+||+||+.+... . ..++.+.++++.++|.+..+.. +..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEW-----PAALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHH
Confidence 3 345679999999999999999999987421 0 1234578899999998776665 4579999999
Q ss_pred HHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1014 Rl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
|++|||+|+.+|++|||||||+|||+.++..+.+.|+++.+ .|+|||++||+++ .+...||++++|.+ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999864 5899999999986 46678999999985 788887764
No 186
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.1e-35 Score=343.25 Aligned_cols=206 Identities=29% Similarity=0.408 Sum_probs=175.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC--ccceEEEEccCCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1302)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 45999999999999999999999999999999999999887 999999998864321 2467999999999999999
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
|+||+.+..+..+.. ..+ ....++.+++.+||++..++.+++
T Consensus 94 v~e~l~~~~~~~~~~--------------------~~~--------------~~~~~~~ll~~~~l~~~~~~~~~~---- 135 (303)
T TIGR01288 94 VRENLLVFGRYFGMS--------------------TRE--------------IEAVIPSLLEFARLESKADVRVAL---- 135 (303)
T ss_pred HHHHHHHHHHHcCCC--------------------HHH--------------HHHHHHHHHHHCCChhHhcCchhh----
Confidence 999998644322110 000 011245678899999988998876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|++++.|++ .++.++||+|++|++|+
T Consensus 136 -LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~til~~sH~~-~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 136 -LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RGKTILLTTHFM-EEAERLCDRLCVLESGR 212 (303)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEECCCH-HHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999976 478888887765 48889999999999999
Q ss_pred EEEEcChhHHHH
Q 000753 422 IVYQGPRDNVLE 433 (1302)
Q Consensus 422 iv~~G~~~~~~~ 433 (1302)
+++.|+.+++.+
T Consensus 213 i~~~g~~~~~~~ 224 (303)
T TIGR01288 213 KIAEGRPHALID 224 (303)
T ss_pred EEEEcCHHHHHh
Confidence 999999988754
No 187
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1e-35 Score=328.67 Aligned_cols=195 Identities=26% Similarity=0.373 Sum_probs=163.6
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh---hh---hc-ceeEEeccCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ET---FA-RVSGYCEQNDIHS 952 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~---~~-~~~gyv~Q~~~~~ 952 (1302)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+... .. ++ +.++|++|++.++
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 95 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLL 95 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccC
Confidence 469999999999999999999999999999999999765 347999999987532 11 22 5699999999999
Q ss_pred CCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccC
Q 000753 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1302)
Q Consensus 953 ~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDE 1032 (1302)
+.+|++||+.+....+. ....+..+.+.++++.+++.+..++. +..||||||||++|||+|+.+|++|||||
T Consensus 96 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~illlDE 167 (221)
T TIGR02211 96 PDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHR-----PSELSGGERQRVAIARALVNQPSLVLADE 167 (221)
T ss_pred CCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 99999999988654321 12233345678999999998777665 34799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEE
Q 000753 1033 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1302)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~ 1087 (1302)
||+|||+.++..+.+.|+++++ .|+|||++||+++ .+ ..+|++++|++ |+++
T Consensus 168 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i~ 220 (221)
T TIGR02211 168 PTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQLF 220 (221)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEec
Confidence 9999999999999999999975 4899999999975 34 56899999985 6654
No 188
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-36 Score=307.50 Aligned_cols=217 Identities=28% Similarity=0.408 Sum_probs=182.4
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
|+.+|++|++. .+++|++||++++|||++||+|||||||||||++|+|...+ .+|++.++|.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 46678887653 46799999999999999999999999999999999997653 4799999999865
Q ss_pred h---hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000753 935 Q---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1302)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1302)
. ..+.+..+.+||+..+....||+|-+.++..-... .....+..+.++++|+..++.+++.+.. ..|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~y-----~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRDY-----RTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccch-----hhcCchH
Confidence 4 45667789999999887778999999987532211 1112233455789999999999887764 4799999
Q ss_pred HHHHHHHHHHhhC------CCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000753 1012 RKRLTIAVELVAN------PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1302)
Q Consensus 1012 rqRl~iA~aL~~~------P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~ 1085 (1302)
||||.+||.|+.- +++||||||||.||...+..++++.|+++++|..|+++-||+++ ...+||++++|.+ |+
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~-Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ-GR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-Ce
Confidence 9999999999863 45889999999999999999999999999999999999999985 6678999999985 89
Q ss_pred EEEecCCCc
Q 000753 1086 VIYAGPLGH 1094 (1302)
Q Consensus 1086 ~~~~g~~~~ 1094 (1302)
++..|++.+
T Consensus 219 v~a~g~p~~ 227 (259)
T COG4559 219 VIASGSPQD 227 (259)
T ss_pred EeecCCHHH
Confidence 999999764
No 189
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.2e-35 Score=374.86 Aligned_cols=207 Identities=26% Similarity=0.364 Sum_probs=172.5
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1302)
+++|+|+|++++||+.++|+||||||||||+++|+|.+ |. +|+|.+||+++.+... ++.++||+|++.+|+.
T Consensus 363 ~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~- 437 (588)
T PRK11174 363 KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPHG- 437 (588)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCCc-
Confidence 35899999999999999999999999999999999999 76 8999999999877653 5789999999999975
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
|++|||.++.. +.+.++..+++...+ .+..+ -.|++..||.||+. +
T Consensus 438 TI~eNI~~g~~-------------------------~~~~eei~~al~~a~------l~~~i--~~lp~G~dT~vge~-G 483 (588)
T PRK11174 438 TLRDNVLLGNP-------------------------DASDEQLQQALENAW------VSEFL--PLLPQGLDTPIGDQ-A 483 (588)
T ss_pred CHHHHhhcCCC-------------------------CCCHHHHHHHHHHhC------HHHHH--HhcccccccccccC-C
Confidence 99999988521 111112222222211 11122 24778899999973 5
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
..||||||||++||||++++|+||+||||||+||+.++..|.+.|+++.+ ++|+|+..|++ ++...+|+|++|++|
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~--~~TvIiItHrl--~~i~~aD~Iivl~~G 559 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASR--RQTTLMVTHQL--EDLAQWDQIWVMQDG 559 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhC--CCEEEEEecCh--HHHHhCCEEEEEeCC
Confidence 66999999999999999999999999999999999999999999998753 68999988887 567889999999999
Q ss_pred eEEEEcChhHHHH
Q 000753 421 QIVYQGPRDNVLE 433 (1302)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1302)
+++.+|+++++.+
T Consensus 560 ~i~e~G~~~eL~~ 572 (588)
T PRK11174 560 QIVQQGDYAELSQ 572 (588)
T ss_pred eEeecCCHHHHHh
Confidence 9999999999864
No 190
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-35 Score=330.22 Aligned_cols=205 Identities=28% Similarity=0.377 Sum_probs=174.4
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCCCCCC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHHG 258 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 258 (1302)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999987 999999999876432 1457999999999999
Q ss_pred CCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCc
Q 000753 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1302)
Q Consensus 259 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 338 (1302)
.+||+||+.+.....+.. . . .....++.+++.+||++..++.+.+
T Consensus 96 ~~t~~e~l~~~~~~~~~~----------~----------~--------------~~~~~~~~~l~~~~l~~~~~~~~~~- 140 (233)
T cd03258 96 SRTVFENVALPLEIAGVP----------K----------A--------------EIEERVLELLELVGLEDKADAYPAQ- 140 (233)
T ss_pred CCcHHHHHHHHHHHcCCC----------H----------H--------------HHHHHHHHHHHHCCChhhhhcChhh-
Confidence 999999998754322110 0 0 0011345688999999888887765
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEec
Q 000753 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1302)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~ 418 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|+
T Consensus 141 ----LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~-~~~~~~~d~i~~l~ 215 (233)
T cd03258 141 ----LSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEM-EVVKRICDRVAVME 215 (233)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999998775577888887775 47788999999999
Q ss_pred CCeEEEEcChhHHH
Q 000753 419 EGQIVYQGPRDNVL 432 (1302)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1302)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999987753
No 191
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=335.35 Aligned_cols=205 Identities=23% Similarity=0.311 Sum_probs=173.9
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCC-CCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHD-LHHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d-~~~~~ 259 (1302)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 35899999999999999999999999999999999999987 999999999876432 245799999997 36777
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
+||+||+.|+.+..+.. .. +....++.+++.+||++..+..+++
T Consensus 97 ~tv~eni~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~~-- 140 (279)
T PRK13650 97 ATVEDDVAFGLENKGIP----------HE------------------------EMKERVNEALELVGMQDFKEREPAR-- 140 (279)
T ss_pred ccHHHHHHhhHHhCCCC----------HH------------------------HHHHHHHHHHHHCCCHhHhhCCccc--
Confidence 89999998864322110 00 0112356789999999888888876
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..|.|+|++.|++. ++ ..+|+|++|++
T Consensus 141 ---LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~ 215 (279)
T PRK13650 141 ---LSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN 215 (279)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999998755789999888764 55 58999999999
Q ss_pred CeEEEEcChhHHH
Q 000753 420 GQIVYQGPRDNVL 432 (1302)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1302)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (279)
T PRK13650 216 GQVESTSTPRELF 228 (279)
T ss_pred CEEEEECCHHHHH
Confidence 9999999998765
No 192
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.8e-35 Score=330.14 Aligned_cols=215 Identities=25% Similarity=0.376 Sum_probs=175.0
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc----cceEEEEccCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1302)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 45999999999999999999999999999999999999886 9999999998765432 3469999999999999
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
+||+||+.+.....+... + ... .. .... .+....++.+++.+||++..++.+++
T Consensus 90 ~tv~~~l~~~~~~~~~~~-~------~~~---~~-~~~~-------------~~~~~~~~~~l~~~~l~~~~~~~~~~-- 143 (236)
T cd03219 90 LTVLENVMVAAQARTGSG-L------LLA---RA-RREE-------------REARERAEELLERVGLADLADRPAGE-- 143 (236)
T ss_pred CCHHHHHHHHHhhccccc-c------ccc---cc-cccH-------------HHHHHHHHHHHHHcCccchhhCChhh--
Confidence 999999988643221000 0 000 00 0000 00112356788999998888888776
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++.|++ .++.+++|+|++|++
T Consensus 144 ---LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~vsH~~-~~~~~~~d~i~~l~~ 218 (236)
T cd03219 144 ---LSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RGITVLLVEHDM-DVVMSLADRVTVLDQ 218 (236)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEecCH-HHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999876 478888887765 477889999999999
Q ss_pred CeEEEEcChhHHH
Q 000753 420 GQIVYQGPRDNVL 432 (1302)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1302)
|++++.|+++++.
T Consensus 219 G~i~~~~~~~~~~ 231 (236)
T cd03219 219 GRVIAEGTPDEVR 231 (236)
T ss_pred CEEEeecCHHHhc
Confidence 9999999988763
No 193
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.5e-35 Score=334.02 Aligned_cols=202 Identities=25% Similarity=0.338 Sum_probs=171.4
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh----------------hhhcceeE
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----------------ETFARVSG 943 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----------------~~~~~~~g 943 (1302)
+.+|+||||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.++.. ...++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 90 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIG 90 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccccccchhHHHHHhhCeE
Confidence 469999999999999999999999999999999999765 347999999986531 13456799
Q ss_pred EeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh
Q 000753 944 YCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVA 1023 (1302)
Q Consensus 944 yv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~ 1023 (1302)
|++|++.+++..|+.||+.+...... ........+.+.++++.+++.+..+.. +..||||||||++|||||+.
T Consensus 91 ~v~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrv~laral~~ 163 (252)
T TIGR03005 91 MVFQSFNLFPHKTVLDNVTEAPVLVL--GMARAEAEKRAMELLDMVGLADKADHM-----PAQLSGGQQQRVAIARALAM 163 (252)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCChhHhhcC-----hhhcCHHHHHHHHHHHHHHc
Confidence 99999999999999999987532211 123334455688999999998776665 45799999999999999999
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1024 NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1024 ~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
+|++|||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|++ |++++.|+.
T Consensus 164 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 164 RPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRVCFFDK-GRIVEQGKP 231 (252)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999999998764 899999999986 56678999999985 789988874
No 194
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-35 Score=326.43 Aligned_cols=201 Identities=27% Similarity=0.353 Sum_probs=170.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCCCHH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVr 263 (1302)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++||+|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999999886 9999999988753 356799999999999999999
Q ss_pred HHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCC
Q 000753 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1302)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 343 (1302)
||+.++....+... . .....++.+++.+||++..++.+++ |
T Consensus 92 e~l~~~~~~~~~~~--------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----L 132 (220)
T cd03293 92 DNVALGLELQGVPK--------------------A--------------EARERAEELLELVGLSGFENAYPHQ-----L 132 (220)
T ss_pred HHHHHHHHHcCCCH--------------------H--------------HHHHHHHHHHHHcCChhhhhCCccc-----C
Confidence 99988643221100 0 0011346688999998888888766 9
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEec--CCe
Q 000753 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS--EGQ 421 (1302)
Q Consensus 344 SGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~--~G~ 421 (1302)
||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~-~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDI-DEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCH-HHHHHhCCEEEEEECCCCE
Confidence 999999999999999999999999999999999999999999998665577888887776 46788999999999 799
Q ss_pred EEEEcChh
Q 000753 422 IVYQGPRD 429 (1302)
Q Consensus 422 iv~~G~~~ 429 (1302)
++..++.+
T Consensus 212 i~~~~~~~ 219 (220)
T cd03293 212 IVAEVEVD 219 (220)
T ss_pred EEEEEEec
Confidence 99988753
No 195
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=337.60 Aligned_cols=223 Identities=25% Similarity=0.369 Sum_probs=180.4
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC-------CccceEEEEccCC--C
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------VPQRTCAYISQHD--L 255 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d--~ 255 (1302)
.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++ .
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999987 99999999987521 1246799999986 4
Q ss_pred CCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc-cccccc
Q 000753 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTM 334 (1302)
Q Consensus 256 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 334 (1302)
+++ .||.||+.|+.+..+.. + .+ ....+..+++.+||. +..++.
T Consensus 97 l~~-~tv~~~l~~~~~~~~~~----------~----------~~--------------~~~~~~~~l~~~~L~~~~~~~~ 141 (288)
T PRK13643 97 LFE-ETVLKDVAFGPQNFGIP----------K----------EK--------------AEKIAAEKLEMVGLADEFWEKS 141 (288)
T ss_pred ccc-chHHHHHHhHHHHcCCC----------H----------HH--------------HHHHHHHHHHHcCCChhhccCC
Confidence 454 69999999875432210 0 00 112356688899996 456776
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeE
Q 000753 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1302)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~i 414 (1302)
+.+ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. +.|++++.|++ .++.+++|+|
T Consensus 142 ~~~-----LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~-g~til~vtHd~-~~~~~~~dri 214 (288)
T PRK13643 142 PFE-----LSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQS-GQTVVLVTHLM-DDVADYADYV 214 (288)
T ss_pred ccc-----CCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHC-CCEEEEEecCH-HHHHHhCCEE
Confidence 655 9999999999999999999999999999999999999999999998763 78888887765 5788899999
Q ss_pred EEecCCeEEEEcChhHHH---HHHHhcCCCCCCCCChHHHH
Q 000753 415 ILLSEGQIVYQGPRDNVL---EFFEHMGFKCPERKGVADFL 452 (1302)
Q Consensus 415 ilL~~G~iv~~G~~~~~~---~~f~~lG~~~p~~~~~adfl 452 (1302)
++|++|+++++|+++++. ++++..|+.+|.....++.+
T Consensus 215 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 215 YLLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 999999999999999874 34556677776654444433
No 196
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.8e-35 Score=324.85 Aligned_cols=200 Identities=29% Similarity=0.398 Sum_probs=170.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-cceEEEEccCCCCCCCCCH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTV 89 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCH
Confidence 35999999999999999999999999999999999999887 9999999998754322 3579999999999989999
Q ss_pred HHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCC
Q 000753 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1302)
Q Consensus 263 rE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1302)
+||+.+..+..+.. .. +....++.+++.+||++..++.+++
T Consensus 90 ~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (213)
T cd03301 90 YDNIAFGLKLRKVP----------KD------------------------EIDERVREVAELLQIEHLLDRKPKQ----- 130 (213)
T ss_pred HHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCHHHHhCChhh-----
Confidence 99998764322100 00 0011346678999999888888876
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeE
Q 000753 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1302)
Q Consensus 343 LSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~i 422 (1302)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|++|++
T Consensus 131 LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~-~~~~~~~d~i~~l~~g~~ 209 (213)
T cd03301 131 LSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQ-VEAMTMADRIAVMNDGQI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhcCeEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999875578888888775 477889999999999999
Q ss_pred EEEc
Q 000753 423 VYQG 426 (1302)
Q Consensus 423 v~~G 426 (1302)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03301 210 QQIG 213 (213)
T ss_pred EecC
Confidence 9876
No 197
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=332.13 Aligned_cols=213 Identities=23% Similarity=0.346 Sum_probs=176.0
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++ .+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 367888876542 2469999999999999999999999999999999999765 3479999999875
Q ss_pred Ch----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCC
Q 000753 934 NQ----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELV-ELKSLNDSMVGLPGVSGLS 1008 (1302)
Q Consensus 934 ~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~~g~~~~~~LS 1008 (1302)
.. ...++.++|++|++.+++.+||.||+.+..... ..+...+.++++++.+ ++.+..+.. +..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 43 124567999999999999999999998754221 1122234567778877 466555544 45799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000753 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1302)
Q Consensus 1009 gGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~ 1088 (1302)
||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999999877999999999986 57889999999985 79999
Q ss_pred ecCCC
Q 000753 1089 AGPLG 1093 (1302)
Q Consensus 1089 ~g~~~ 1093 (1302)
.|++.
T Consensus 218 ~~~~~ 222 (237)
T PRK11614 218 EDTGD 222 (237)
T ss_pred eCCHH
Confidence 98753
No 198
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.3e-35 Score=328.17 Aligned_cols=198 Identities=24% Similarity=0.368 Sum_probs=170.4
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChhhhcceeEEeccCCCCCCCCCHHH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1302)
+.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..... .+.++|++|++.+++.+|++|
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 469999999999999999999999999999999999765 35799999998764322 257999999999899999999
Q ss_pred HHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCH
Q 000753 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1302)
Q Consensus 960 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~ 1039 (1302)
|+.+....+. .. ...+.++++.+++.+..+.. +..||||||||++|||||+.+|++|+|||||+|||+
T Consensus 90 ~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~ 157 (223)
T TIGR03740 90 NLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKK-----AKQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDP 157 (223)
T ss_pred HHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhh-----HhhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCH
Confidence 9987654331 11 23478899999998877765 347999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCc
Q 000753 1040 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1302)
Q Consensus 1040 ~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~ 1094 (1302)
.++..+++.|++++++|+|||++||+++ ++.+.||++++|.+ |++++.|++.+
T Consensus 158 ~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~~ 210 (223)
T TIGR03740 158 IGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKINK 210 (223)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChhh
Confidence 9999999999999877999999999986 56678999999985 78999988643
No 199
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.1e-34 Score=337.26 Aligned_cols=215 Identities=27% Similarity=0.459 Sum_probs=181.0
Q ss_pred CCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcC
Q 000753 851 QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISG 930 (1302)
Q Consensus 851 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g 930 (1302)
.+..+..+|++|.++ +++++++|+|+++++|+.+||+|+||||||||+++|+|..++ .+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~------------~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYP------------DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecC------------CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECC
Confidence 456677778888764 223799999999999999999999999999999999998763 589999999
Q ss_pred ccC---ChhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccC-----C
Q 000753 931 YPK---NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGL-----P 1002 (1302)
Q Consensus 931 ~~~---~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~-----~ 1002 (1302)
.+. +.+.+++.++||+|++.+++ -|++||+.++. .+.+ ++.+.++++..+|.+..+...|. +
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~-----~~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR-----PDAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC-----CcCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 874 55778999999999999876 59999998752 1222 34478899999988776553332 2
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
+.++|||||+|||++||||+++++++++||||++||.++++.|++.|.++++ ++|||++||++ .....+|+|++|++
T Consensus 453 ~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl--~~~~~~D~I~vld~ 529 (559)
T COG4988 453 GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRL--EDAADADRIVVLDN 529 (559)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcCh--HHHhcCCEEEEecC
Confidence 4568999999999999999999999999999999999999999999999985 59999999996 46678999999985
Q ss_pred CcEEEEecCCC
Q 000753 1083 GGRVIYAGPLG 1093 (1302)
Q Consensus 1083 gG~~~~~g~~~ 1093 (1302)
|++++.|...
T Consensus 530 -G~l~~~g~~~ 539 (559)
T COG4988 530 -GRLVEQGTHE 539 (559)
T ss_pred -CceeccCCHH
Confidence 8999999754
No 200
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-35 Score=331.27 Aligned_cols=214 Identities=29% Similarity=0.390 Sum_probs=174.1
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1302)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 46999999999999999999999999999999999999886 999999998876532 245799999999999
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
+.+||+||+.++..... . ... .+ .+..+ . .....++.+++.+||++..++.+++
T Consensus 91 ~~~tv~~~l~~~~~~~~-~-~~~---~~------~~~~~-~--------------~~~~~~~~~l~~~~l~~~~~~~~~~ 144 (241)
T cd03256 91 ERLSVLENVLSGRLGRR-S-TWR---SL------FGLFP-K--------------EEKQRALAALERVGLLDKAYQRADQ 144 (241)
T ss_pred ccCcHHHHHHhhhcccc-h-hhh---hh------cccCc-H--------------HHHHHHHHHHHHcCChhhhCCCccc
Confidence 99999999987532110 0 000 00 00000 0 0112345678899998877777765
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|
T Consensus 145 -----LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~-~~~~~~~d~v~~l 218 (241)
T cd03256 145 -----LSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQV-DLAREYADRIVGL 218 (241)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998765578888887765 4778899999999
Q ss_pred cCCeEEEEcChhHHH
Q 000753 418 SEGQIVYQGPRDNVL 432 (1302)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1302)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (241)
T cd03256 219 KDGRIVFDGPPAELT 233 (241)
T ss_pred ECCEEEeecCHHHhh
Confidence 999999999988763
No 201
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.8e-35 Score=341.03 Aligned_cols=205 Identities=29% Similarity=0.440 Sum_probs=176.7
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC--ccceEEEEccCCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1302)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999987 999999998875422 2467999999999999999
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
|.||+.|.++..+... . +....++.+++.+||++..|+.+++
T Consensus 92 v~e~l~~~~~~~~~~~--------------------~--------------~~~~~~~~~l~~~gl~~~~~~~~~~---- 133 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG--------------------Q--------------LLKQRVEEMIELVGLRPEQHKKIGQ---- 133 (301)
T ss_pred HHHHHHHHHHHcCCCH--------------------H--------------HHHHHHHHHHHHCCCchHhcCchhh----
Confidence 9999998655432110 0 0011356789999999999988876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
|||||||||+||+||+++|++++|||||+|||+.++..+++.|++++. +.|++++.|++ .++.++||+|++|++|+
T Consensus 134 -LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~--~~tiii~sH~l-~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 134 -LSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK--DKTIILSTHIM-QEVEAICDRVIIINKGK 209 (301)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC--CCEEEEEcCCH-HHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999864 67877776665 58899999999999999
Q ss_pred EEEEcChhHHHH
Q 000753 422 IVYQGPRDNVLE 433 (1302)
Q Consensus 422 iv~~G~~~~~~~ 433 (1302)
+++.|+.+++..
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999998765
No 202
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=337.64 Aligned_cols=200 Identities=23% Similarity=0.324 Sum_probs=170.4
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh----hhhcceeEEeccCCC-CCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQNDI-HSPY 954 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~-~~~~ 954 (1302)
+.+|+||||+|++||++||+||||||||||+++|+|..+ +..|+|.++|.+... ...++.+||++|++. .+..
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 459999999999999999999999999999999999765 357999999987632 234567999999975 3567
Q ss_pred CCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 000753 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1302)
Q Consensus 955 lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPT 1034 (1302)
.|+.||+.+..... ..+..+..+.+.++++.++|.+..+.. +..||||||||++||+||+.+|+||||||||
T Consensus 93 ~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLDEPt 164 (274)
T PRK13644 93 RTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRS-----PKTLSGGQGQCVALAGILTMEPECLIFDEVT 164 (274)
T ss_pred chHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 89999998765322 123344456688999999998877766 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
+|||+.++..+++.|++++++|+|||++||+++ ++ ..||++++|++ |++++.|+.
T Consensus 165 ~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~g~~ 219 (274)
T PRK13644 165 SMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLEGEP 219 (274)
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999877999999999986 34 67999999985 789998875
No 203
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.2e-35 Score=328.53 Aligned_cols=205 Identities=24% Similarity=0.369 Sum_probs=173.5
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc----cceEEEEccCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1302)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 46999999999999999999999999999999999999887 9999999988754321 3469999999999999
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
+||+||+.+.....+.. . . +....++.+++.+||++..++.+++
T Consensus 90 ~tv~~~l~~~~~~~~~~----------~----------~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 133 (232)
T cd03218 90 LTVEENILAVLEIRGLS----------K----------K--------------EREEKLEELLEEFHITHLRKSKASS-- 133 (232)
T ss_pred CcHHHHHHHHHHhcCCC----------H----------H--------------HHHHHHHHHHHHcCChhhhhCChhh--
Confidence 99999998753321100 0 0 0011346688999999888888876
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|+|++|++
T Consensus 134 ---LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~tii~~sH~~-~~~~~~~d~i~~l~~ 208 (232)
T cd03218 134 ---LSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-RGIGVLITDHNV-RETLSITDRAYIIYE 208 (232)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999876 377888887765 478899999999999
Q ss_pred CeEEEEcChhHHH
Q 000753 420 GQIVYQGPRDNVL 432 (1302)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1302)
|++++.|+.+++.
T Consensus 209 G~i~~~~~~~~~~ 221 (232)
T cd03218 209 GKVLAEGTPEEIA 221 (232)
T ss_pred CeEEEEeCHHHhh
Confidence 9999999987753
No 204
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-35 Score=331.44 Aligned_cols=216 Identities=24% Similarity=0.293 Sum_probs=176.4
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC---ceeEEEEEEcCc
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISGY 931 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g~ 931 (1302)
+.++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|...+ .+.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14247 4 IEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQ 70 (250)
T ss_pred EEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCE
Confidence 56777776442 24699999999999999999999999999999999997542 135899999998
Q ss_pred cCCh---hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccCCCC
Q 000753 932 PKNQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGLPGV 1004 (1302)
Q Consensus 932 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~~~~ 1004 (1302)
++.. ..+++.+||++|++.+++.+||.||+.+....+.. .....+..+.++++++.++|.+ ..+.. +
T Consensus 71 ~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~ 144 (250)
T PRK14247 71 DIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP-----A 144 (250)
T ss_pred ECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----c
Confidence 7632 34566799999999888999999999886533211 1122334456889999999854 23333 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000753 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1302)
Q Consensus 1005 ~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG 1084 (1302)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.||++++|++ |
T Consensus 145 ~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G 221 (250)
T PRK14247 145 GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-G 221 (250)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999864 899999999986 56678999999985 7
Q ss_pred EEEEecCC
Q 000753 1085 RVIYAGPL 1092 (1302)
Q Consensus 1085 ~~~~~g~~ 1092 (1302)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (250)
T PRK14247 222 QIVEWGPT 229 (250)
T ss_pred eEEEECCH
Confidence 89888875
No 205
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=335.51 Aligned_cols=218 Identities=22% Similarity=0.243 Sum_probs=178.0
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 367788776542 3469999999999999999999999999999999999765 3579999999876
Q ss_pred Ch---hh-hcceeEEeccCCCCCCCCCHHHHHHHHHHhhCC----------C--CCcHHHHHHHHHHHHHHcCCcccccc
Q 000753 934 NQ---ET-FARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS----------S--DVDTKKRKMFVDEVMELVELKSLNDS 997 (1302)
Q Consensus 934 ~~---~~-~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~----------~--~~~~~~~~~~v~~~l~~l~L~~~~~~ 997 (1302)
.. .. .+..++|++|++.+++.+||+||+.+....... . .....+..+.+.++++.+++.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 42 12 234589999999999999999999886431100 0 00112233567889999999877776
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCe
Q 000753 998 MVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1076 (1302)
Q Consensus 998 ~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~ 1076 (1302)
. +..||||||||++||+||+.+|++|||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.||+
T Consensus 150 ~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 Q-----AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 6 3579999999999999999999999999999999999999999999999765 899999999986 56788999
Q ss_pred EEEEecCcEEEEecCCC
Q 000753 1077 LLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1077 i~~l~~gG~~~~~g~~~ 1093 (1302)
+++|++ |++++.|+..
T Consensus 224 i~~l~~-g~i~~~~~~~ 239 (255)
T PRK11300 224 IYVVNQ-GTPLANGTPE 239 (255)
T ss_pred EEEEEC-CeEEecCCHH
Confidence 999985 7899888753
No 206
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-35 Score=332.78 Aligned_cols=214 Identities=26% Similarity=0.334 Sum_probs=175.3
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC---ceeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1302)
.++++|+++.++ ++.+|+|+||+|++||++||+|+||||||||+++|+|..+. .+.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 578888876442 24699999999999999999999999999999999997542 12579999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1302)
.++.. ..+++.+||++|++.+++ +|++||+.+....+ ....+...+.++++++.+++.+ ..++.
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 234567999999998887 89999998865432 1223334456888999998842 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++++ |+|||++||+++ ++.+.||++++|+
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 899999999976 5667899999998
Q ss_pred cCcEEEEecCC
Q 000753 1082 RGGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1302)
+ |++++.|++
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 5 799998875
No 207
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=348.08 Aligned_cols=207 Identities=22% Similarity=0.301 Sum_probs=177.6
Q ss_pred cceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-------cceEEEEccCCC
Q 000753 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDL 255 (1302)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 255 (1302)
...+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 346899999999999999999999999999999999999987 9999999998765432 247999999999
Q ss_pred CCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccc
Q 000753 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1302)
Q Consensus 256 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1302)
+++.+||+||+.|+....+... . +....++.+++.+||++..++.+
T Consensus 117 l~~~~Tv~enl~~~~~~~~~~~----------~------------------------~~~~~~~e~L~~~gL~~~~~~~~ 162 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAGINA----------E------------------------ERREKALDALRQVGLENYAHSYP 162 (400)
T ss_pred CCCCCCHHHHHHHHHHhcCCCH----------H------------------------HHHHHHHHHHHHcCCChhhhcCc
Confidence 9999999999998754322110 0 00113466899999998888888
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEE
Q 000753 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1302)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ii 415 (1302)
.+ |||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+..++|+|++.|++ .++.+++|+|+
T Consensus 163 ~~-----LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~-~~~~~~~Dri~ 236 (400)
T PRK10070 163 DE-----LSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDL-DEAMRIGDRIA 236 (400)
T ss_pred cc-----CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCH-HHHHHhCCEEE
Confidence 76 9999999999999999999999999999999999999999999998765678888887765 57889999999
Q ss_pred EecCCeEEEEcChhHHH
Q 000753 416 LLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 416 lL~~G~iv~~G~~~~~~ 432 (1302)
+|++|++++.|+++++.
T Consensus 237 vL~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 237 IMQNGEVVQVGTPDEIL 253 (400)
T ss_pred EEECCEEEecCCHHHHH
Confidence 99999999999988764
No 208
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-35 Score=332.06 Aligned_cols=215 Identities=23% Similarity=0.294 Sum_probs=174.8
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc---eeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1302)
.+.++|+++.++ ++.+|+||||+|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 578888876542 245999999999999999999999999999999999965421 2479999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK----SLNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~~g~ 1001 (1302)
.++.. ...++.++|++|++.+++ +||+||+.+...... ........+.+.++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87531 235677999999988875 899999988653321 112233455678889998873 233443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
++.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++ +++|||++||+++ ++.+.+|++++|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 46899999999999999999999999999999999999999999999996 4799999999986 5667899999998
Q ss_pred cCcEEEEecCC
Q 000753 1082 RGGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1302)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 5 799988874
No 209
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-35 Score=332.18 Aligned_cols=217 Identities=25% Similarity=0.300 Sum_probs=176.8
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc---eeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1302)
.++++|+++.++ ++.+|+|+|++|++||++||+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 367788876542 246999999999999999999999999999999999976532 2479999999
Q ss_pred ccCC-----hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000753 931 YPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1302)
.++. ...+++.++|++|++.+++.+||.||+.+....+.. ....+...+.++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLNDY--- 146 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhccC---
Confidence 8763 123456799999999999999999999876543211 1122334456788999998853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++...||++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 222 (253)
T PRK14267 147 --PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 699999999986 5677899999998
Q ss_pred cCcEEEEecCC
Q 000753 1082 RGGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1302)
+ |++++.|+.
T Consensus 223 ~-G~i~~~~~~ 232 (253)
T PRK14267 223 L-GKLIEVGPT 232 (253)
T ss_pred C-CEEEEeCCH
Confidence 5 799988875
No 210
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=331.80 Aligned_cols=213 Identities=24% Similarity=0.355 Sum_probs=177.2
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecc
Confidence 56777766542 3469999999999999999999999999999999999765 35799999998652
Q ss_pred ---------hhhhcceeEEeccCCCCCCCCCHHHHHHHHH-HhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000753 935 ---------QETFARVSGYCEQNDIHSPYVTVYESLLYSA-WLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGV 1004 (1302)
Q Consensus 935 ---------~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~-~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~ 1004 (1302)
....++.++|++|++.+++.+|+.||+.+.. ... .....+..+.+.++++.+++.+..+.. +
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~ 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRF-----P 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----h
Confidence 1234567999999999999999999997532 221 122233345688999999998777766 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000753 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1302)
Q Consensus 1005 ~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG 1084 (1302)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|.+ |
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g 217 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-G 217 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999777999999999986 56678999999985 8
Q ss_pred EEEEecCC
Q 000753 1085 RVIYAGPL 1092 (1302)
Q Consensus 1085 ~~~~~g~~ 1092 (1302)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (242)
T PRK11124 218 HIVEQGDA 225 (242)
T ss_pred EEEEeCCH
Confidence 89988875
No 211
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=5e-34 Score=376.56 Aligned_cols=135 Identities=22% Similarity=0.270 Sum_probs=108.6
Q ss_pred CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 000753 951 HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLPGVSGLSTEQRKRLTIAVELV---ANPS 1026 (1302)
Q Consensus 951 ~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqRl~iA~aL~---~~P~ 1026 (1302)
.+...||.|+|.++..-..+.....++..+.+ ++++.++|.++ .++. +..||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 45678999999887642211112223344455 58899999876 5665 3479999999999999998 5999
Q ss_pred CccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe-----cCcEEEEecCCC
Q 000753 1027 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-----RGGRVIYAGPLG 1093 (1302)
Q Consensus 1027 illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~-----~gG~~~~~g~~~ 1093 (1302)
+|||||||+|||+.+...+++.|++++++|.|||+++|+++ ....+|++++|. .+|+++..|++.
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~--~i~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH--VVKVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHHhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999999888999999999975 348899999995 368999999864
No 212
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=338.65 Aligned_cols=218 Identities=22% Similarity=0.338 Sum_probs=176.7
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC-------CccceEEEEccCCC-
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------VPQRTCAYISQHDL- 255 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~- 255 (1302)
.++|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++.
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 45999999999999999999999999999999999999887 99999999987531 12357999999862
Q ss_pred CCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc-cccccc
Q 000753 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTM 334 (1302)
Q Consensus 256 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 334 (1302)
.+...||+||+.|+.+..+.. .. +....++.+++.+||+ +..++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVS----------EE------------------------DAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHCCCChhhhhCC
Confidence 333579999998864322110 00 0112356789999997 567887
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeE
Q 000753 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1302)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~i 414 (1302)
+.+ |||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++..+.|+|++.|++ .++.+++|+|
T Consensus 143 ~~~-----LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~-~~~~~~~drv 216 (290)
T PRK13634 143 PFE-----LSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSM-EDAARYADQI 216 (290)
T ss_pred ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEE
Confidence 766 9999999999999999999999999999999999999999999999776678888887765 4788999999
Q ss_pred EEecCCeEEEEcChhHHHH---HHHhcCCCCCC
Q 000753 415 ILLSEGQIVYQGPRDNVLE---FFEHMGFKCPE 444 (1302)
Q Consensus 415 ilL~~G~iv~~G~~~~~~~---~f~~lG~~~p~ 444 (1302)
++|++|+++++|+++++.+ .+...|..+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 9999999999999888742 33344544443
No 213
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.1e-36 Score=374.74 Aligned_cols=216 Identities=25% Similarity=0.416 Sum_probs=183.5
Q ss_pred ccCCCcccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEcc
Q 000753 176 LVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQ 252 (1302)
Q Consensus 176 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q 252 (1302)
+.++.++..+||+|+|+++++|+.+||+|||||||||.+.+|-..++|+ +|.|.++|++++..+. |+.+|.|+|
T Consensus 995 F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVsQ 1071 (1228)
T KOG0055|consen 995 FAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVSQ 1071 (1228)
T ss_pred eeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceecc
Confidence 3456677889999999999999999999999999999999999999997 9999999999988765 589999999
Q ss_pred CCCCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccccc
Q 000753 253 HDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICAD 332 (1302)
Q Consensus 253 ~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 332 (1302)
+|.+|. -|+||||.|+... . +.++.++|+..+. ..+. +.+|++.+|
T Consensus 1072 EP~LF~-~TIrENI~YG~~~--v-----------------------s~~eIi~Aak~AN-----aH~F---I~sLP~GyD 1117 (1228)
T KOG0055|consen 1072 EPVLFN-GTIRENIAYGSEE--V-----------------------SEEEIIEAAKLAN-----AHNF---ISSLPQGYD 1117 (1228)
T ss_pred Cchhhc-ccHHHHHhccCCC--C-----------------------CHHHHHHHHHHhh-----hHHH---HhcCcCccc
Confidence 999997 5999999997210 0 1122333333222 1233 457999999
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
|.||+ .+..||||||||++||||+++||+||||||.||+||+++..-+.+.|.+... |+|.|+.-|.. .+.+.+|
T Consensus 1118 T~vGe-rG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~--gRT~IvIAHRL--STIqnaD 1192 (1228)
T KOG0055|consen 1118 TRVGE-RGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAME--GRTTIVIAHRL--STIQNAD 1192 (1228)
T ss_pred CccCc-ccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhc--CCcEEEEecch--hhhhcCC
Confidence 99996 4455999999999999999999999999999999999999999999999865 67887777765 5889999
Q ss_pred eEEEecCCeEEEEcChhHHHH
Q 000753 413 DIILLSEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~~ 433 (1302)
.|+|+++|+|+++|++++++.
T Consensus 1193 ~I~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1193 VIAVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred EEEEEECCEEEecccHHHHHh
Confidence 999999999999999999985
No 214
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=333.23 Aligned_cols=214 Identities=28% Similarity=0.394 Sum_probs=177.0
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|+++.++ ++.+|+|+||+|++|++++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 56677765442 3469999999999999999999999999999999999765 35799999998653
Q ss_pred h---hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000753 935 Q---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1302)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1302)
. ...++.++|++|++.+++.+||+||+.+..... ....+...+.++++++.+++.+..++.+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 234567999999998888899999998754221 1112233456789999999987777764 4799999
Q ss_pred HHHHHHHHHHh------hCCCCccccCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000753 1012 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1302)
Q Consensus 1012 rqRl~iA~aL~------~~P~illLDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG 1084 (1302)
|||++||+||+ .+|++|+|||||+|||+.++..+.+.|++++ ++|+|||++||+++ ++...||++++|.+ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999987 67899999999986 56678999999985 7
Q ss_pred EEEEecCCC
Q 000753 1085 RVIYAGPLG 1093 (1302)
Q Consensus 1085 ~~~~~g~~~ 1093 (1302)
++++.|+..
T Consensus 218 ~i~~~~~~~ 226 (258)
T PRK13548 218 RLVADGTPA 226 (258)
T ss_pred EEEeeCCHH
Confidence 888888753
No 215
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=339.58 Aligned_cols=219 Identities=25% Similarity=0.318 Sum_probs=177.7
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++.. ....+.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 2 ~i~~~~l~~~~~~~--------~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPG--------TPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCC--------CCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 35677777655310 0001459999999999999999999999999999999999765 3579999999875
Q ss_pred Ch-------hhhcceeEEeccCCC-CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000753 934 NQ-------ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGV 1004 (1302)
Q Consensus 934 ~~-------~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 1004 (1302)
.. ...++.+||++|++. .+..+||.||+.|..... ....++..+.++++++.++|. +..++. +
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKS-----P 143 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCC-----c
Confidence 32 234567999999973 233589999998764332 223344556789999999996 566665 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000753 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1302)
Q Consensus 1005 ~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG 1084 (1302)
+.||||||||++||+||+.+|++|||||||+|||+.++..+.+.|++++++|.|||++||+++ ++.+.||++++|++ |
T Consensus 144 ~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G 221 (287)
T PRK13641 144 FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-G 221 (287)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999777999999999986 56788999999985 7
Q ss_pred EEEEecCC
Q 000753 1085 RVIYAGPL 1092 (1302)
Q Consensus 1085 ~~~~~g~~ 1092 (1302)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13641 222 KLIKHASP 229 (287)
T ss_pred EEEEeCCH
Confidence 89988875
No 216
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=349.99 Aligned_cols=203 Identities=22% Similarity=0.285 Sum_probs=174.2
Q ss_pred cceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh---hh----hcceeEEeccCCCC
Q 000753 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ET----FARVSGYCEQNDIH 951 (1302)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~----~~~~~gyv~Q~~~~ 951 (1302)
...+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.++.. .. .++.+|||+|++.+
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 3468999999999999999999999999999999999765 347999999987642 11 23579999999999
Q ss_pred CCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcccc
Q 000753 952 SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1302)
Q Consensus 952 ~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLD 1031 (1302)
++.+||+||+.|....+. ...++..+.+.++++.++|.+..++. ++.||||||||++|||||+.+|++||||
T Consensus 118 ~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~-----~~~LSgGq~QRv~LArAL~~~P~iLLLD 189 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSY-----PDELSGGMRQRVGLARALAINPDILLMD 189 (400)
T ss_pred CCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 999999999998765432 22344456788999999998877776 4579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1032 EPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
|||+|||+.++..+++.|+++.+ .|+|||++||+++ ++...+|++++|++ |+++..|++.
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~~ 250 (400)
T PRK10070 190 EAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTPD 250 (400)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCHH
Confidence 99999999999999999999865 5899999999986 56788999999985 7999888753
No 217
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=336.09 Aligned_cols=215 Identities=23% Similarity=0.360 Sum_probs=178.1
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|+++.++ ++..+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYS------------GSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeC------------CCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 56777776542 12359999999999999999999999999999999999765 35899999998754
Q ss_pred h---hhhcceeEEeccCCC-CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000753 935 Q---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1302)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1302)
. ...++.+|||+|++. .+...||.||+.+..... ....+...+.++++++.++|.+..++. ++.||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRV-----PHHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCCHH
Confidence 2 345567999999974 334679999998765322 233444456688999999998877776 4579999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000753 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1302)
Q Consensus 1011 qrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~ 1089 (1302)
||||++|||||+.+|++|||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.||++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999765 899999999986 56688999999985 789998
Q ss_pred cCCC
Q 000753 1090 GPLG 1093 (1302)
Q Consensus 1090 g~~~ 1093 (1302)
|+..
T Consensus 220 g~~~ 223 (277)
T PRK13652 220 GTVE 223 (277)
T ss_pred CCHH
Confidence 8753
No 218
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.9e-35 Score=326.40 Aligned_cols=203 Identities=29% Similarity=0.415 Sum_probs=171.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC--CccceEEEEccCCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF--VPQRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lT 261 (1302)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 46999999999999999999999999999999999999887 99999999887532 12457999999999998999
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
|+||+.+..+..+... .+ ....++.+++.+||++..++.+++
T Consensus 92 v~~~l~~~~~~~~~~~--------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~---- 133 (220)
T cd03263 92 VREHLRFYARLKGLPK--------------------SE--------------IKEEVELLLRVLGLTDKANKRART---- 133 (220)
T ss_pred HHHHHHHHHHHcCCCH--------------------HH--------------HHHHHHHHHHHcCCHHHHhChhhh----
Confidence 9999987644322100 00 011245678899999888888876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++++ +.|+|++.|++ .++.+++|++++|++|+
T Consensus 134 -LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tii~~sH~~-~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 134 -LSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--GRSIILTTHSM-DEAEALCDRIAIMSDGK 209 (220)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--CCEEEEEcCCH-HHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999875 47888777766 46778999999999999
Q ss_pred EEEEcChhHH
Q 000753 422 IVYQGPRDNV 431 (1302)
Q Consensus 422 iv~~G~~~~~ 431 (1302)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988764
No 219
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-35 Score=329.43 Aligned_cols=206 Identities=28% Similarity=0.386 Sum_probs=173.0
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 260 (1302)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 45999999999999999999999999999999999999886 999999998875432 245799999999999999
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc--cccccccCc
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI--CADTMVGDE 338 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~~ 338 (1302)
||+||+.+..+..+.. .. +....+..+++.+||++ ..++.+.+
T Consensus 91 tv~e~l~~~~~~~~~~--------------------~~--------------~~~~~~~~~l~~l~l~~~~~~~~~~~~- 135 (242)
T cd03295 91 TVEENIALVPKLLKWP--------------------KE--------------KIRERADELLALVGLDPAEFADRYPHE- 135 (242)
T ss_pred cHHHHHHHHHHHcCCC--------------------HH--------------HHHHHHHHHHHHcCCCcHHHHhcChhh-
Confidence 9999998754322100 00 00112456788999985 56776655
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEec
Q 000753 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1302)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~ 418 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|+
T Consensus 136 ----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~-~~~~~~~d~i~~l~ 210 (242)
T cd03295 136 ----LSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDI-DEAFRLADRIAIMK 210 (242)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCH-HHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999765577888887765 47788999999999
Q ss_pred CCeEEEEcChhHHH
Q 000753 419 EGQIVYQGPRDNVL 432 (1302)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1302)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999987763
No 220
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.7e-35 Score=325.86 Aligned_cols=195 Identities=24% Similarity=0.355 Sum_probs=164.6
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 35999999999999999999999999999999999999887 999999998875432 245799999999999
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
+.+||+||+.+..+..+.. .+ +....++.+++.+||++..++.+++
T Consensus 93 ~~~tv~e~l~~~~~~~~~~---------------------~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~ 138 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVP---------------------PR-------------DANERVSAALEKVGLEGKAHALPMQ 138 (216)
T ss_pred ccccHHHHHHHHHHhcCCC---------------------HH-------------HHHHHHHHHHHHcCChhhhhCChhh
Confidence 9999999998864322110 00 0011346688999999888888776
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|++ .++.+++|++++|
T Consensus 139 -----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~tii~vsH~~-~~~~~~~d~i~~l 211 (216)
T TIGR00960 139 -----LSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRR-GTTVLVATHDI-NLVETYRHRTLTL 211 (216)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998753 77888877765 4777899999999
Q ss_pred cCCeE
Q 000753 418 SEGQI 422 (1302)
Q Consensus 418 ~~G~i 422 (1302)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99975
No 221
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=2.7e-35 Score=330.27 Aligned_cols=207 Identities=23% Similarity=0.271 Sum_probs=167.5
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh---hhh-cceeEEeccCCCCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETF-ARVSGYCEQNDIHSPYV 955 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~-~~~~gyv~Q~~~~~~~l 955 (1302)
+.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+... ... +..++|++|++.+++.+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLFLAFQYPEEIPGV 92 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceEeeeccccccCCc
Confidence 46999999999999999999999999999999999973111357999999987542 122 33489999999999999
Q ss_pred CHHHHHHHHHHhhCCC----CCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccc
Q 000753 956 TVYESLLYSAWLRLSS----DVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1302)
Q Consensus 956 Tv~E~l~~~~~lr~~~----~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illL 1030 (1302)
|++|++.+........ .....+..+.+.++++.++|. +..++.+. ..||||||||++||++|+.+|++|+|
T Consensus 93 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LS~G~~qrl~la~al~~~p~llll 168 (243)
T TIGR01978 93 SNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EGFSGGEKKRNEILQMALLEPKLAIL 168 (243)
T ss_pred CHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cCcCHHHHHHHHHHHHHhcCCCEEEe
Confidence 9999998764322110 112233345688999999997 45555432 24999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh-cCeEEEEecCcEEEEecCC
Q 000753 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~-~D~i~~l~~gG~~~~~g~~ 1092 (1302)
||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|++ |++++.|+.
T Consensus 169 DEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G~i~~~g~~ 229 (243)
T TIGR01978 169 DEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-GRIVKSGDV 229 (243)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-CEEEEecCH
Confidence 9999999999999999999999877899999999986 45555 799999985 789888874
No 222
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3.1e-35 Score=325.15 Aligned_cols=203 Identities=25% Similarity=0.390 Sum_probs=169.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc----cceEEEEccCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 46999999999999999999999999999999999999887 9999999988754332 3569999999999999
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHc-CCcccccccccCc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKIL-GLDICADTMVGDE 338 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 338 (1302)
+||+||+.+.....+. .+ ....++.+++.+ +|++..++.+++
T Consensus 90 ~t~~~~l~~~~~~~~~----------------------~~--------------~~~~~~~~l~~~~~l~~~~~~~~~~- 132 (222)
T cd03224 90 LTVEENLLLGAYARRR----------------------AK--------------RKARLERVYELFPRLKERRKQLAGT- 132 (222)
T ss_pred CcHHHHHHHHhhhcCc----------------------hh--------------HHHHHHHHHHHHHhhhhhhhCchhh-
Confidence 9999999886432110 00 001133456666 477767777766
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEec
Q 000753 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1302)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~ 418 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|+|++|+
T Consensus 133 ----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH~~-~~~~~~~d~i~~l~ 206 (222)
T cd03224 133 ----LSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-EGVTILLVEQNA-RFALEIADRAYVLE 206 (222)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhccEEEEee
Confidence 999999999999999999999999999999999999999999999876 467888887665 57789999999999
Q ss_pred CCeEEEEcChhHHH
Q 000753 419 EGQIVYQGPRDNVL 432 (1302)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1302)
+|+++..|+.+++.
T Consensus 207 ~G~i~~~~~~~~~~ 220 (222)
T cd03224 207 RGRVVLEGTAAELL 220 (222)
T ss_pred CCeEEEeCCHHHHh
Confidence 99999999987653
No 223
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=335.09 Aligned_cols=201 Identities=25% Similarity=0.370 Sum_probs=168.7
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh-----hhhcceeEEeccCCCC-CC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-----ETFARVSGYCEQNDIH-SP 953 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~-~~ 953 (1302)
+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.. +.
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIF 91 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcccccCCHHHHHhheEEEeeChhhccc
Confidence 469999999999999999999999999999999999765 347999999987531 2345679999999753 34
Q ss_pred CCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCC
Q 000753 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1302)
Q Consensus 954 ~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEP 1033 (1302)
..|+.||+.+..... ....++..+.++++++.+++.+..++. +..||||||||++||++|+.+|++||||||
T Consensus 92 ~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrl~laraL~~~p~lllLDEP 163 (271)
T PRK13638 92 YTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQP-----IQCLSHGQKKRVAIAGALVLQARYLLLDEP 163 (271)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCC-----chhCCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 568999998764332 122334445678899999998877765 457999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1034 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
|+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 164 t~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 220 (271)
T PRK13638 164 TAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILTHGAP 220 (271)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999777999999999986 56678999999985 789988875
No 224
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.8e-35 Score=343.98 Aligned_cols=208 Identities=23% Similarity=0.299 Sum_probs=177.9
Q ss_pred ccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCc----ccCCCCc-------cceEEEE
Q 000753 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGH----ELNEFVP-------QRTCAYI 250 (1302)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~----~~~~~~~-------~~~~~yv 250 (1302)
....+|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+ ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 4567999999999999999999999999999999999999987 999999996 3332211 2479999
Q ss_pred ccCCCCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccc
Q 000753 251 SQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDIC 330 (1302)
Q Consensus 251 ~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 330 (1302)
+|++.++|.+||+||+.|+....+... . +....++++++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------~------------------------~~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------A------------------------ERRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------H------------------------HHHHHHHHHHHHcCCchh
Confidence 999999999999999998754332110 0 011235668999999988
Q ss_pred ccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhh
Q 000753 331 ADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDL 410 (1302)
Q Consensus 331 ~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~ 410 (1302)
.|+.+++ |||||||||+|||||+.+|+||||||||+|||+.++.++.+.|+++.+..++|+|++.|+. .++.++
T Consensus 158 ~~~~~~~-----LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl-~e~~~l 231 (382)
T TIGR03415 158 ADKKPGE-----LSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDL-DEALKI 231 (382)
T ss_pred hcCChhh-----CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHh
Confidence 8888877 9999999999999999999999999999999999999999999999876678888887765 578899
Q ss_pred cCeEEEecCCeEEEEcChhHHH
Q 000753 411 FDDIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 411 ~D~iilL~~G~iv~~G~~~~~~ 432 (1302)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999998875
No 225
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-35 Score=333.54 Aligned_cols=218 Identities=29% Similarity=0.388 Sum_probs=178.4
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++ ++.+|+|+||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 467888776542 2469999999999999999999999999999999999765 3479999999865
Q ss_pred C---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000753 934 N---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1302)
Q Consensus 934 ~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1302)
. ...+++.++|++|++.+++.+|+.||+.+....... .........+.++++++.+++.+..++.+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 3 234456799999998888899999999875321110 00111223456789999999987767664 47999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000753 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1302)
Q Consensus 1010 GqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~ 1088 (1302)
|||||++|||||+.+|+||||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.||++++|.+ |++++
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999764 899999999986 56788999999985 78888
Q ss_pred ecCCC
Q 000753 1089 AGPLG 1093 (1302)
Q Consensus 1089 ~g~~~ 1093 (1302)
.|+..
T Consensus 229 ~~~~~ 233 (265)
T PRK10575 229 QGTPA 233 (265)
T ss_pred ecCHH
Confidence 88753
No 226
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-35 Score=335.41 Aligned_cols=214 Identities=26% Similarity=0.321 Sum_probs=178.6
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|+++.++. ..+.+|+|||++|++||++||+||||||||||+++|+|...+ ..|+|.++|.++.
T Consensus 6 l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i~ 72 (279)
T PRK13635 6 IRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVLS 72 (279)
T ss_pred EEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECC
Confidence 678887765421 124599999999999999999999999999999999997653 4799999998764
Q ss_pred h---hhhcceeEEeccCCC-CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000753 935 Q---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1302)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1302)
. ...++.+||++|++. .++..||.||+.+..... ....++..+.+.++++.++|.+..++.+ ..||||
T Consensus 73 ~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G 144 (279)
T PRK13635 73 EETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSGG 144 (279)
T ss_pred cCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHH
Confidence 3 234567999999974 667789999998865432 1233444567899999999988777764 479999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000753 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1302)
Q Consensus 1011 qrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~ 1089 (1302)
||||++|||+|+.+|+||||||||+|||+.++..+++.|++++++ |+|||++||+++ ++ ..||++++|.+ |++++.
T Consensus 145 ~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~~ 221 (279)
T PRK13635 145 QKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILEE 221 (279)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999999865 899999999976 34 46999999985 789999
Q ss_pred cCC
Q 000753 1090 GPL 1092 (1302)
Q Consensus 1090 g~~ 1092 (1302)
|+.
T Consensus 222 g~~ 224 (279)
T PRK13635 222 GTP 224 (279)
T ss_pred CCH
Confidence 875
No 227
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.5e-35 Score=345.49 Aligned_cols=205 Identities=22% Similarity=0.323 Sum_probs=175.5
Q ss_pred cccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCc----cCC---hhh---hc-ceeEEe
Q 000753 877 EDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGY----PKN---QET---FA-RVSGYC 945 (1302)
Q Consensus 877 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~----~~~---~~~---~~-~~~gyv 945 (1302)
++...+|+|+||+|++||+++|+|+||||||||+++|+|... +..|+|.++|. ++. ... .+ +.++||
T Consensus 34 ~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 34 TGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred hCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 345679999999999999999999999999999999999765 34799999996 221 111 22 579999
Q ss_pred ccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000753 946 EQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANP 1025 (1302)
Q Consensus 946 ~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P 1025 (1302)
+|++.++|.+||+||+.|....+ .....+..+.+.++++.++|.+..+..+ ..||||||||++|||||+.+|
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P 183 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDA 183 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999875443 2334455667899999999988877764 479999999999999999999
Q ss_pred CCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1026 SIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1026 ~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
+||||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|++.
T Consensus 184 ~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~ 250 (382)
T TIGR03415 184 DILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPE 250 (382)
T ss_pred CEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 999999999999999999999999999764 899999999986 57788999999985 7999999864
No 228
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-35 Score=322.87 Aligned_cols=198 Identities=26% Similarity=0.366 Sum_probs=167.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCCCHH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVr 263 (1302)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 45999999999999999999999999999999999999887 9999999987754 2356799999999999999999
Q ss_pred HHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCC
Q 000753 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1302)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 343 (1302)
||+.+.....+.. ..+ ....++.+++.+||++..++.+++ |
T Consensus 89 e~l~~~~~~~~~~--------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~-----L 129 (210)
T cd03269 89 DQLVYLAQLKGLK--------------------KEE--------------ARRRIDEWLERLELSEYANKRVEE-----L 129 (210)
T ss_pred HHHHHHHHHcCCC--------------------hHH--------------HHHHHHHHHHHcCChHHHhCcHhh-----C
Confidence 9998754322110 000 011346688999999888887766 9
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000753 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIV 423 (1302)
Q Consensus 344 SGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv 423 (1302)
||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++. +.|++++.|++ .++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~-~~tii~~sH~~-~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARA-GKTVILSTHQM-ELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEECCCH-HHHHHhhhEEEEEeCCEEE
Confidence 999999999999999999999999999999999999999999998764 67888777665 4777899999999999998
Q ss_pred EEc
Q 000753 424 YQG 426 (1302)
Q Consensus 424 ~~G 426 (1302)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 765
No 229
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.3e-35 Score=330.83 Aligned_cols=213 Identities=26% Similarity=0.357 Sum_probs=172.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1302)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 45999999999999999999999999999999999999886 999999998875432 245799999999999
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
+.+||+||+.++..... ..+. .+ .+..+ .+....++.+++.+||++..++.+.+
T Consensus 92 ~~~tv~~~l~~~~~~~~--~~~~---~~------~~~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 145 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYK--PTWR---SL------LGRFS---------------EEDKERALSALERVGLADKAYQRADQ 145 (243)
T ss_pred ccccHHHHHhhcccccc--cchh---hh------hcccc---------------HHHHHHHHHHHHHcCcHhhhcCCccc
Confidence 99999999987532100 0000 00 00000 00112346678899998877777765
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|
T Consensus 146 -----LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~-~~~~~~~d~v~~l 219 (243)
T TIGR02315 146 -----LSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQV-DLAKKYADRIVGL 219 (243)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhcCeEEEE
Confidence 9999999999999999999999999999999999999999999998765577888877765 4677899999999
Q ss_pred cCCeEEEEcChhHH
Q 000753 418 SEGQIVYQGPRDNV 431 (1302)
Q Consensus 418 ~~G~iv~~G~~~~~ 431 (1302)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999998765
No 230
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-35 Score=330.75 Aligned_cols=217 Identities=21% Similarity=0.291 Sum_probs=176.9
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc---eeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1302)
.+.++|+++.++ .+.+|+|+|++|++||++||+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 367778776542 246999999999999999999999999999999999975421 2489999999
Q ss_pred ccCC-----hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000753 931 YPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1302)
.++. ....++.+||++|++.+++.+||+||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 8753 12345679999999999999999999987654321 1123344556888999999842 33333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 457999999999999999999999999999999999999999999999864 699999999986 5677899999997
Q ss_pred c-----CcEEEEecCC
Q 000753 1082 R-----GGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~-----gG~~~~~g~~ 1092 (1302)
+ .|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 2 5899998875
No 231
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.7e-35 Score=329.90 Aligned_cols=203 Identities=26% Similarity=0.338 Sum_probs=169.5
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChh----hhcceeEEeccCCCCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE----TFARVSGYCEQNDIHSPYV 955 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~~l 955 (1302)
+.+|+|+||+|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.... ..++.++|++|++.+++.+
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 92 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENL 92 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCC
Confidence 469999999999999999999999999999999999765 3479999999875321 1235699999999999999
Q ss_pred CHHHHHHHHHHhhCC-----CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccc
Q 000753 956 TVYESLLYSAWLRLS-----SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1302)
Q Consensus 956 Tv~E~l~~~~~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illL 1030 (1302)
||+||+.+....... .....+...+.++++++.+++.+..+.. ++.||||||||++|||||+.+|++|+|
T Consensus 93 tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Ge~qrv~laral~~~p~~lll 167 (242)
T TIGR03411 93 TVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRL-----AGLLSHGQKQWLEIGMLLMQDPKLLLL 167 (242)
T ss_pred CHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 999999875431100 0011223445688999999998777665 357999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++ |+++..|+.
T Consensus 168 DEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~~~~~~~~ 226 (242)
T TIGR03411 168 DEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GSVLAEGSL 226 (242)
T ss_pred cCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-CeEEeeCCH
Confidence 999999999999999999999875 799999999986 56678999999985 788888875
No 232
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-35 Score=333.46 Aligned_cols=219 Identities=23% Similarity=0.298 Sum_probs=179.9
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1302)
..+.++|+++.++ ++.+|+|||+++++||+++|+||||||||||+++|+|..+ +..|+|.++|.+
T Consensus 6 ~~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~ 70 (265)
T PRK10253 6 ARLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEH 70 (265)
T ss_pred cEEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEE
Confidence 3577888877552 3469999999999999999999999999999999999765 347999999987
Q ss_pred CCh---hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000753 933 KNQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1302)
Q Consensus 933 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1302)
+.. ...++.++|++|++.+++.+|++||+.+....... .....+...+.++++++.++|.+..++. +..||
T Consensus 71 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 145 (265)
T PRK10253 71 IQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLS 145 (265)
T ss_pred hhhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCC
Confidence 532 23456799999999998899999999765211100 0001123345688999999998777765 45799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEE
Q 000753 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1302)
Q Consensus 1009 gGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~ 1087 (1302)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ ++.+.||++++|.+ |+++
T Consensus 146 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~ 223 (265)
T PRK10253 146 GGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIV 223 (265)
T ss_pred hHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 899999999986 57788999999985 7899
Q ss_pred EecCCC
Q 000753 1088 YAGPLG 1093 (1302)
Q Consensus 1088 ~~g~~~ 1093 (1302)
+.|+..
T Consensus 224 ~~g~~~ 229 (265)
T PRK10253 224 AQGAPK 229 (265)
T ss_pred EeCCHH
Confidence 988854
No 233
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-35 Score=300.25 Aligned_cols=201 Identities=28% Similarity=0.437 Sum_probs=178.0
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChhhhcceeEEeccCCCCCCCCCHHH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1302)
..+|+|||++|.+||.+.++||||||||||||+++|..+ +..|.|.+||.++.... ..-|.|+|++.++|.+|+.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPg--aergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPG--AERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCC--ccceeEeccCccchhhHHHH
Confidence 359999999999999999999999999999999999877 45899999999875432 23489999999999999999
Q ss_pred HHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCH
Q 000753 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1302)
Q Consensus 960 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~ 1039 (1302)
|+.|+..++ .+++.++.+.+.+.+.++||.+..++.+ -+||||||||+.|||||+.+|++|+||||.+.||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999998887 4667888899999999999999888774 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhcCeEEEEecC-cEEEEecCCC
Q 000753 1040 RAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRG-GRVIYAGPLG 1093 (1302)
Q Consensus 1040 ~~~~~i~~~l~~~~-~~g~tvi~t~H~~~~~~~~~~D~i~~l~~g-G~~~~~g~~~ 1093 (1302)
-+++.++++|-++. ++|+.++++||+.+ +..-.++++++|..+ |+|+..-+++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCCC
Confidence 99999999999986 56999999999976 455578999999853 6788776653
No 234
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-35 Score=333.83 Aligned_cols=204 Identities=26% Similarity=0.323 Sum_probs=171.2
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCC-CCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDL-HHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 259 (1302)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 18 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (274)
T PRK13647 18 TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFS 94 (274)
T ss_pred CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhcc
Confidence 35899999999999999999999999999999999999887 9999999998764322 357999999963 4456
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
.||+||+.|+....+.. . .+....++.+++.+||.+..++.+.+
T Consensus 95 ~tv~e~l~~~~~~~~~~---------------------~-------------~~~~~~~~~~l~~~~L~~~~~~~~~~-- 138 (274)
T PRK13647 95 STVWDDVAFGPVNMGLD---------------------K-------------DEVERRVEEALKAVRMWDFRDKPPYH-- 138 (274)
T ss_pred CcHHHHHHhhHHHcCCC---------------------H-------------HHHHHHHHHHHHHCCCHHHhcCChhh--
Confidence 89999998854321110 0 00112356788999999888888876
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++. +.|++++.|++ .++.+++|+|++|++
T Consensus 139 ---LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-g~tili~tH~~-~~~~~~~d~i~~l~~ 213 (274)
T PRK13647 139 ---LSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQ-GKTVIVATHDV-DLAAEWADQVIVLKE 213 (274)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCH-HHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999999764 78888887764 467789999999999
Q ss_pred CeEEEEcChhHH
Q 000753 420 GQIVYQGPRDNV 431 (1302)
Q Consensus 420 G~iv~~G~~~~~ 431 (1302)
|+++++|+++++
T Consensus 214 G~i~~~g~~~~~ 225 (274)
T PRK13647 214 GRVLAEGDKSLL 225 (274)
T ss_pred CEEEEECCHHHh
Confidence 999999998654
No 235
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.6e-35 Score=324.80 Aligned_cols=195 Identities=26% Similarity=0.382 Sum_probs=165.0
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC-------ccceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-------PQRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~~ 256 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999999887 999999999876432 13579999999999
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccccccccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 336 (1302)
++.+||+||+.++....+... . .....++.+++.+||++..++.++
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~--------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~~ 139 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK--------------------K--------------ERRERAEELLERVGLGDRLNHYPS 139 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH--------------------H--------------HHHHHHHHHHHHcCCchhhhcChh
Confidence 999999999988644321100 0 001134668899999988888877
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEE
Q 000753 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1302)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iil 416 (1302)
+ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++. .+|++++
T Consensus 140 ~-----LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~-~~d~v~~ 212 (218)
T cd03255 140 E-----LSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LAE-YADRIIE 212 (218)
T ss_pred h-----cCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHh-hhcEEEE
Confidence 6 99999999999999999999999999999999999999999999997645788888888764 454 9999999
Q ss_pred ecCCeE
Q 000753 417 LSEGQI 422 (1302)
Q Consensus 417 L~~G~i 422 (1302)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 236
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=9.4e-34 Score=361.74 Aligned_cols=122 Identities=25% Similarity=0.328 Sum_probs=102.1
Q ss_pred CCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCC---CCccc
Q 000753 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLPGVSGLSTEQRKRLTIAVELVANP---SIIFM 1030 (1302)
Q Consensus 955 lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P---~illL 1030 (1302)
+||.|++.|...+. . .....+.++.++|... .++. +..||||||||+.||++|+.+| ++++|
T Consensus 792 ltv~E~l~~f~~~~---~------i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llIL 857 (943)
T PRK00349 792 MTVEEALEFFEAIP---K------IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYIL 857 (943)
T ss_pred CcHHHHHHHHHhch---h------hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 78889888865432 1 1124678999999763 4554 3579999999999999999999 99999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe-----cCcEEEEecCC
Q 000753 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-----RGGRVIYAGPL 1092 (1302)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~-----~gG~~~~~g~~ 1092 (1302)
||||+|||+.....+++.|+++.++|.|||+++|+++ ....+|+++.|. ++|++++.|++
T Consensus 858 DEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 858 DEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 9999999999999999999999888999999999975 456899999994 47999999985
No 237
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-35 Score=324.01 Aligned_cols=194 Identities=26% Similarity=0.360 Sum_probs=163.4
Q ss_pred ccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh-hhhcceeEEeccCCCCCCCCCHHHHHHH
Q 000753 885 SVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVYESLLY 963 (1302)
Q Consensus 885 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~~ 963 (1302)
|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999765 347999999987642 1234679999999999999999999987
Q ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHH
Q 000753 964 SAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1043 (1302)
Q Consensus 964 ~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~ 1043 (1302)
....+. .. .+..++.++++++.++|.+..++. +..||||||||++|||||+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRL-----PGELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 543211 11 123345688999999998777766 3479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1044 IVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1044 ~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
.+++.|+++++ .|+|||++||+++ ++.+.||++++|++ |+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 99999999875 4899999999975 56678999999985 7777543
No 238
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-35 Score=330.59 Aligned_cols=219 Identities=21% Similarity=0.283 Sum_probs=177.6
Q ss_pred cCCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCC--C-ceeEEEE
Q 000753 850 FQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDI 926 (1302)
Q Consensus 850 ~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i 926 (1302)
.....+.++|+++.++ +..+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|
T Consensus 9 ~~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i 75 (260)
T PRK10744 9 TAPSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEI 75 (260)
T ss_pred CCCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEE
Confidence 3445688899887652 2359999999999999999999999999999999999753 1 1357999
Q ss_pred EEcCccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccc
Q 000753 927 KISGYPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDS 997 (1302)
Q Consensus 927 ~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~ 997 (1302)
.++|.+... ..+++.++|++|++.+++ .|++||+.+...... ..+.++..+.++++++.+++.+ ..+.
T Consensus 76 ~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 152 (260)
T PRK10744 76 LLDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQ 152 (260)
T ss_pred EECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhc
Confidence 999987531 234677999999998887 899999987653221 1233344456889999999843 2333
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeE
Q 000753 998 MVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL 1077 (1302)
Q Consensus 998 ~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i 1077 (1302)
. +..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.+|++
T Consensus 153 ~-----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i 225 (260)
T PRK10744 153 S-----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYT 225 (260)
T ss_pred C-----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEE
Confidence 3 45799999999999999999999999999999999999999999999986 4789999999986 566789999
Q ss_pred EEEecCcEEEEecCC
Q 000753 1078 LLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1078 ~~l~~gG~~~~~g~~ 1092 (1302)
++|++ |+++..|+.
T Consensus 226 ~~l~~-G~i~~~g~~ 239 (260)
T PRK10744 226 AFMYL-GELIEFGNT 239 (260)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 789988874
No 239
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-35 Score=324.89 Aligned_cols=201 Identities=19% Similarity=0.287 Sum_probs=168.6
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-------cceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 256 (1302)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999999886 9999999998765432 2569999999999
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccccccccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 336 (1302)
++.+||+||+.+.....+.. . . +....++.+++.+||++..++.++
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~----------~----------~--------------~~~~~~~~~l~~~gl~~~~~~~~~ 144 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKK----------P----------A--------------EINSRALEMLAAVGLEHRANHRPS 144 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCC----------H----------H--------------HHHHHHHHHHHHcCCchhhhCChh
Confidence 99999999998864321100 0 0 001134568899999888788776
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEE
Q 000753 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1302)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iil 416 (1302)
+ |||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++. .+|++++
T Consensus 145 ~-----LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~~~-~~~~~~~ 217 (233)
T PRK11629 145 E-----LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-LAK-RMSRQLE 217 (233)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHH-hhCEEEE
Confidence 6 99999999999999999999999999999999999999999999987645788888887764 454 4689999
Q ss_pred ecCCeEEEEcCh
Q 000753 417 LSEGQIVYQGPR 428 (1302)
Q Consensus 417 L~~G~iv~~G~~ 428 (1302)
|++|+++..|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999998874
No 240
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3.1e-35 Score=333.26 Aligned_cols=221 Identities=29% Similarity=0.380 Sum_probs=179.2
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc-eeEEEEEEcCcc
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYP 932 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~g~~ 932 (1302)
.+.++|+++.+ +++.+|+|+||++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTF-------------NQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEe-------------CCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 36777777644 2356999999999999999999999999999999999976432 135999999987
Q ss_pred CCh--------hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCC-----CCCcHHHHHHHHHHHHHHcCCcccccccc
Q 000753 933 KNQ--------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-----SDVDTKKRKMFVDEVMELVELKSLNDSMV 999 (1302)
Q Consensus 933 ~~~--------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~~ 999 (1302)
... ...++.++|++|++.+++.+||.||+.+......+ .....++....++++++.+++.+..++.
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~- 149 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQR- 149 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCC-
Confidence 532 22356799999999999999999999875321000 0111223345688999999998777765
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEE
Q 000753 1000 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELL 1078 (1302)
Q Consensus 1000 g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~ 1078 (1302)
+..||+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++++ .|+|||++||+++ .+...+|+++
T Consensus 150 ----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 150 ----VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred ----ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 347999999999999999999999999999999999999999999999975 4899999999986 4678899999
Q ss_pred EEecCcEEEEecCCCc
Q 000753 1079 LLKRGGRVIYAGPLGH 1094 (1302)
Q Consensus 1079 ~l~~gG~~~~~g~~~~ 1094 (1302)
+|.+ |++++.|+..+
T Consensus 225 ~l~~-g~i~~~g~~~~ 239 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQQ 239 (262)
T ss_pred EEEC-CEEEEeCCHHH
Confidence 9985 78899888643
No 241
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-35 Score=328.96 Aligned_cols=221 Identities=25% Similarity=0.357 Sum_probs=175.4
Q ss_pred CcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCC--C-ceeEEEEEE
Q 000753 852 PLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKI 928 (1302)
Q Consensus 852 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i 928 (1302)
|..+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... . .+.+|+|.+
T Consensus 4 ~~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 70 (253)
T PRK14242 4 PPKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILL 70 (253)
T ss_pred CcEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEE
Confidence 34578888887652 2359999999999999999999999999999999999632 1 124799999
Q ss_pred cCccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000753 929 SGYPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPG 1003 (1302)
Q Consensus 929 ~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~ 1003 (1302)
+|.++.. ..+++.++|++|++.+++ .||+||+.+....+.. ...+...+.++++++.+++.+....... ..
T Consensus 71 ~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~ 146 (253)
T PRK14242 71 DGENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLH-ES 146 (253)
T ss_pred CCEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhh-CC
Confidence 9987532 234567999999998887 5999999886543211 1223334567889999998542111111 11
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000753 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1302)
Q Consensus 1004 ~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~g 1083 (1302)
+..||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++. +|+|||++||+++ ++.+.+|++++|.+
T Consensus 147 ~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~v~~l~~- 223 (253)
T PRK14242 147 ALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDVTAFFYM- 223 (253)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCEEEEEEC-
Confidence 45799999999999999999999999999999999999999999999985 4799999999986 56678999999985
Q ss_pred cEEEEecCC
Q 000753 1084 GRVIYAGPL 1092 (1302)
Q Consensus 1084 G~~~~~g~~ 1092 (1302)
|+++..|+.
T Consensus 224 G~i~~~g~~ 232 (253)
T PRK14242 224 GKLIEVGPT 232 (253)
T ss_pred CEEEEeCCH
Confidence 788888874
No 242
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=332.54 Aligned_cols=217 Identities=27% Similarity=0.366 Sum_probs=177.6
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|+++.+ +++.+|+||||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~-------------~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGY-------------GTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEE-------------CCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 5667776544 23569999999999999999999999999999999999755 34799999998653
Q ss_pred h---hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000753 935 Q---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1302)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1302)
. ...++.++|++|++.+++.+|+.||+.+....... .....+...+.++++++.+++.+..++. +..||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRR-----LTDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCC-----cccCCHH
Confidence 2 23456799999999888889999999875211000 0111123345678999999998777766 4579999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1011 qrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999998777999999999986 57788999999985 7888888
Q ss_pred CCC
Q 000753 1091 PLG 1093 (1302)
Q Consensus 1091 ~~~ 1093 (1302)
+..
T Consensus 221 ~~~ 223 (255)
T PRK11231 221 TPE 223 (255)
T ss_pred CHH
Confidence 754
No 243
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.8e-35 Score=327.28 Aligned_cols=200 Identities=28% Similarity=0.352 Sum_probs=166.4
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh---h-hhcceeEEeccCCCCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---E-TFARVSGYCEQNDIHSPYV 955 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~-~~~~~~gyv~Q~~~~~~~l 955 (1302)
+.+|+|+||++++||++||+|+||||||||+++|+|... +.+|+|.++|.+... . ..++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRL 90 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCC
Confidence 469999999999999999999999999999999999765 357999999987532 1 2345799999999999999
Q ss_pred CHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 000753 956 TVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVE-LKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1302)
Q Consensus 956 Tv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPT 1034 (1302)
|+.||+.+....+. .. ..+.+.++++.++ +.+..++. +..||||||||++||++|+.+|++|+|||||
T Consensus 91 tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~illlDEPt 159 (230)
T TIGR03410 91 TVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGGQQQQLAIARALVTRPKLLLLDEPT 159 (230)
T ss_pred cHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 99999987654321 11 1223567777776 45555555 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCc
Q 000753 1035 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1302)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~ 1094 (1302)
+|||+.++..+.+.|++++++ |+|||++||+++ ++...||++++|.+ |++++.|+..+
T Consensus 160 ~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~~~~~~~ 218 (230)
T TIGR03410 160 EGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVASGAGDE 218 (230)
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCHHH
Confidence 999999999999999998764 899999999976 56668999999985 78999888643
No 244
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=7.1e-35 Score=323.57 Aligned_cols=213 Identities=25% Similarity=0.360 Sum_probs=173.6
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++.. .....+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 46788887655310 001359999999999999999999999999999999999765 3479999999875
Q ss_pred Chh---h---h-cceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000753 934 NQE---T---F-ARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSG 1006 (1302)
Q Consensus 934 ~~~---~---~-~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 1006 (1302)
... . . ++.++|++|++.+++.+|+.||+.+....+. .......+.+.++++.+++.+..++. +..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHL-----PAQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCC-----hhh
Confidence 321 1 1 2579999999999999999999987654321 22334456788999999998776665 347
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000753 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1302)
Q Consensus 1007 LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~ 1085 (1302)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ .+ +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999998654 899999999986 34 56999999985 67
Q ss_pred EEE
Q 000753 1086 VIY 1088 (1302)
Q Consensus 1086 ~~~ 1088 (1302)
+++
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 754
No 245
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-35 Score=338.57 Aligned_cols=226 Identities=23% Similarity=0.253 Sum_probs=182.1
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.+...... . ...+...+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~--~-~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~--p~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGL--F-KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIET--PTGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCc--c-ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCC--CCCcEEEECCEEc
Confidence 47888888766421100 0 00123579999999999999999999999999999999999765 3479999999876
Q ss_pred Ch------hhhcceeEEeccCC--CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000753 934 NQ------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGV 1004 (1302)
Q Consensus 934 ~~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~ 1004 (1302)
.. ..+++.++||+|++ .+.|.+|+.+++.+...... .....+..+.+.++++.++|.+ ..++. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINT--SLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 32 23456799999998 58899999999876543321 2334455667899999999963 45555 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000753 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1302)
Q Consensus 1005 ~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~g 1083 (1302)
..||||||||++|||||+.+|++||+||||+|||+.++..|+++|+++.+ .|.|||++||+++ .+...+|++++|.+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 58999999999999999999999999999999999999999999999976 4999999999975 45568999999985
Q ss_pred cEEEEecCCC
Q 000753 1084 GRVIYAGPLG 1093 (1302)
Q Consensus 1084 G~~~~~g~~~ 1093 (1302)
|++++.|+..
T Consensus 231 G~ive~g~~~ 240 (327)
T PRK11308 231 GRCVEKGTKE 240 (327)
T ss_pred CEEEEECCHH
Confidence 8999999853
No 246
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=2.8e-35 Score=326.84 Aligned_cols=198 Identities=25% Similarity=0.364 Sum_probs=166.0
Q ss_pred ecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChhhhcceeEEeccCCCCCCCCCHHHHHH
Q 000753 883 LHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLL 962 (1302)
Q Consensus 883 L~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~ 962 (1302)
|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... ...+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999765 35799999998764321 12489999999999999999998
Q ss_pred HHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHH
Q 000753 963 YSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1042 (1302)
Q Consensus 963 ~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~ 1042 (1302)
+....... ....++..+.+.++++.+++.+..++. +..||||||||++||++|+.+|++|||||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKR-----PGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 75321111 223334455688999999998777765 357999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1043 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1043 ~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|++
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998764 899999999986 56778999999985 788877754
No 247
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.9e-35 Score=325.40 Aligned_cols=204 Identities=23% Similarity=0.340 Sum_probs=167.6
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCc-----CCCCCccceEEECCcccCCCC-----ccceEEEEccC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKL-----GKDLRASGKITYCGHELNEFV-----PQRTCAYISQH 253 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~-----~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~ 253 (1302)
+++|+|+|+++++|++++|+||||||||||+++|+|.+ +|. +|+|.++|+++.... .++.++|++|+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 89 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQK 89 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecC
Confidence 36999999999999999999999999999999999998 775 999999998875432 24679999999
Q ss_pred CCCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccc
Q 000753 254 DLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADT 333 (1302)
Q Consensus 254 d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 333 (1302)
+.++ .+||+||+.++.+..+... .+ +....++.+++.+||++..+.
T Consensus 90 ~~~~-~~tv~e~l~~~~~~~~~~~--------------------~~-------------~~~~~~~~~l~~~~l~~~~~~ 135 (227)
T cd03260 90 PNPF-PGSIYDNVAYGLRLHGIKL--------------------KE-------------ELDERVEEALRKAALWDEVKD 135 (227)
T ss_pred chhc-cccHHHHHHhHHHhcCCCc--------------------HH-------------HHHHHHHHHHHHcCCChHHhc
Confidence 9888 7999999988643221000 00 001234567889999877666
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCe
Q 000753 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1302)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ 413 (1302)
.+. .+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. .|+|++.|++ .++.+++|+
T Consensus 136 ~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~tii~~sH~~-~~~~~~~d~ 209 (227)
T cd03260 136 RLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE--YTIVIVTHNM-QQAARVADR 209 (227)
T ss_pred cCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC--cEEEEEeccH-HHHHHhCCE
Confidence 540 1349999999999999999999999999999999999999999999999763 6777777665 477889999
Q ss_pred EEEecCCeEEEEcChhH
Q 000753 414 IILLSEGQIVYQGPRDN 430 (1302)
Q Consensus 414 iilL~~G~iv~~G~~~~ 430 (1302)
+++|++|++++.|++++
T Consensus 210 i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 210 TAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEEeCCEEEEecCccc
Confidence 99999999999998765
No 248
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4.2e-35 Score=320.71 Aligned_cols=195 Identities=29% Similarity=0.418 Sum_probs=167.0
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC-CccceEEEEccCCCCCCCCCH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-VPQRTCAYISQHDLHHGEMTV 262 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTV 262 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 46999999999999999999999999999999999999886 99999999876532 124579999999999999999
Q ss_pred HHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCC
Q 000753 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1302)
Q Consensus 263 rE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1302)
+||+.+.....+. ....++.+++.+||++..++.+++
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~----- 126 (208)
T cd03268 90 RENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKVKG----- 126 (208)
T ss_pred HHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhHhh-----
Confidence 9999875431110 011245678899998888888776
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeE
Q 000753 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1302)
Q Consensus 343 LSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~i 422 (1302)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH~~-~~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QGITVLISSHLL-SEIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEcCCH-HHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999876 477888887665 477789999999999999
Q ss_pred EEEc
Q 000753 423 VYQG 426 (1302)
Q Consensus 423 v~~G 426 (1302)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 249
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-35 Score=332.87 Aligned_cols=215 Identities=26% Similarity=0.347 Sum_probs=176.7
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|+++.++ +.+.+|+|||++|++||++||+||||||||||+++|+|... +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 45677776542 12359999999999999999999999999999999999765 34799999998763
Q ss_pred h-----hhhcceeEEeccCCC-CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000753 935 Q-----ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1302)
Q Consensus 935 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1302)
. ...++.++|++|++. .+...||.||+.+..... ....++..+.+.++++.++|.+..++.+ +.||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 234567999999973 334579999998754321 1233344566889999999988877764 4799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000753 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1302)
Q Consensus 1009 gGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~ 1088 (1302)
||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999777999999999976 56678999999985 78998
Q ss_pred ecCCC
Q 000753 1089 AGPLG 1093 (1302)
Q Consensus 1089 ~g~~~ 1093 (1302)
.|+..
T Consensus 218 ~g~~~ 222 (275)
T PRK13639 218 EGTPK 222 (275)
T ss_pred eCCHH
Confidence 88753
No 250
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=5.8e-35 Score=331.29 Aligned_cols=223 Identities=22% Similarity=0.318 Sum_probs=177.3
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|+++.++.....+ ..+.+.+|+|+|++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 56778776653110000 0113569999999999999999999999999999999999765 35799999998754
Q ss_pred hh------hhcceeEEeccCC--CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000753 935 QE------TFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVS 1005 (1302)
Q Consensus 935 ~~------~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~ 1005 (1302)
.. ..++.++|++|++ .+.+.+||+||+.+...... ........+.+.++++.+++. ...+.. +.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 21 2356799999997 46678999999976543211 122233445688999999995 556655 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000753 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1302)
Q Consensus 1006 ~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG 1084 (1302)
.||||||||++|||||+.+|++|||||||+|||+.++..+.+.|++++++ |+|||++||+++ .+...+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999998764 899999999986 56678999999985 8
Q ss_pred EEEEecCC
Q 000753 1085 RVIYAGPL 1092 (1302)
Q Consensus 1085 ~~~~~g~~ 1092 (1302)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 99998875
No 251
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=5.6e-34 Score=365.17 Aligned_cols=209 Identities=28% Similarity=0.354 Sum_probs=176.7
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1302)
..++|+|++|.++. +++.+|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEE
Confidence 46899999998741 12469999999999999999999999999999999999766 358999999988
Q ss_pred CC---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000753 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-------DSMVGLP 1002 (1302)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 1002 (1302)
+. ...+++.+|||+|++.+++ -|++||+.++. + .+ ++.++++++..++.+.. |+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 64 4567889999999999886 49999998742 1 22 23477888888887543 4455543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|++||+++ ..+.+|++++|++
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~ 659 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA 659 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC
Confidence 3579999999999999999999999999999999999999999999886 589999999974 5678999999985
Q ss_pred CcEEEEecCC
Q 000753 1083 GGRVIYAGPL 1092 (1302)
Q Consensus 1083 gG~~~~~g~~ 1092 (1302)
|++++.|+.
T Consensus 660 -G~iv~~G~~ 668 (686)
T TIGR03797 660 -GRVVQQGTY 668 (686)
T ss_pred -CEEEEECCH
Confidence 899999985
No 252
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-35 Score=333.47 Aligned_cols=205 Identities=20% Similarity=0.296 Sum_probs=171.1
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC-------CccceEEEEccCC--
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------VPQRTCAYISQHD-- 254 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d-- 254 (1302)
+++|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 45999999999999999999999999999999999999987 99999999987542 1246799999986
Q ss_pred CCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc-ccccc
Q 000753 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADT 333 (1302)
Q Consensus 255 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 333 (1302)
.+++ .||.||+.|+....+.. . . +....++.+++.+||+ +..++
T Consensus 97 ~l~~-~tv~e~i~~~~~~~~~~----------~----------~--------------~~~~~~~~~l~~~gL~~~~~~~ 141 (286)
T PRK13646 97 QLFE-DTVEREIIFGPKNFKMN----------L----------D--------------EVKNYAHRLLMDLGFSRDVMSQ 141 (286)
T ss_pred ccch-hhHHHHHHhhHHHcCCC----------H----------H--------------HHHHHHHHHHHHcCCChhhhhC
Confidence 4555 59999998864321110 0 0 0112346688999997 67777
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCe
Q 000753 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1302)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ 413 (1302)
.+.+ |||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++.+..+.|++++.|+. .++.+++|+
T Consensus 142 ~~~~-----LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~-~~~~~~~dr 215 (286)
T PRK13646 142 SPFQ-----MSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDM-NEVARYADE 215 (286)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCH-HHHHHhCCE
Confidence 7766 9999999999999999999999999999999999999999999999765578888887765 477889999
Q ss_pred EEEecCCeEEEEcChhHHH
Q 000753 414 IILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1302)
|++|++|+++++|+++++.
T Consensus 216 i~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 216 VIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999998764
No 253
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-35 Score=337.93 Aligned_cols=221 Identities=19% Similarity=0.259 Sum_probs=178.5
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC-c-eeEEEEEEcCcc
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YIEGDIKISGYP 932 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~-g-~~~G~i~i~g~~ 932 (1302)
++++|++..++.. .+...+|+||||+|++||++||+|+||||||||+++|+|.... + +.+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 6778877665321 1124699999999999999999999999999999999997542 2 357999999987
Q ss_pred CCh---hhh----cceeEEeccCC--CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc---cccccc
Q 000753 933 KNQ---ETF----ARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL---NDSMVG 1000 (1302)
Q Consensus 933 ~~~---~~~----~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~---~~~~~g 1000 (1302)
+.. ..+ ++.++||+|++ .+.|.+|+.+++........ ....++..+.+.++++.++|.+. .+..
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~-- 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDVY-- 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhCC--
Confidence 642 122 23699999998 47889999998876543321 22344556778999999999753 3333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEE
Q 000753 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLL 1079 (1302)
Q Consensus 1001 ~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~ 1079 (1302)
+.+||||||||++|||||+.+|++||+||||+|||+.++..+++.|+++.+ .|.|||++||+++ .+.+.+|++++
T Consensus 151 ---p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~v 226 (326)
T PRK11022 151 ---PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIV 226 (326)
T ss_pred ---chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEE
Confidence 458999999999999999999999999999999999999999999999976 5899999999976 46678999999
Q ss_pred EecCcEEEEecCCC
Q 000753 1080 LKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1080 l~~gG~~~~~g~~~ 1093 (1302)
|.+ |++++.|+..
T Consensus 227 m~~-G~ive~g~~~ 239 (326)
T PRK11022 227 MYA-GQVVETGKAH 239 (326)
T ss_pred EEC-CEEEEECCHH
Confidence 985 8999999853
No 254
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=5.6e-35 Score=325.73 Aligned_cols=202 Identities=30% Similarity=0.423 Sum_probs=168.6
Q ss_pred cccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh--hhhcceeEEec-cCCCCCC
Q 000753 877 EDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCE-QNDIHSP 953 (1302)
Q Consensus 877 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~-Q~~~~~~ 953 (1302)
++.+.+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++ |++.+++
T Consensus 31 ~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 31 YREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred cCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 345679999999999999999999999999999999999765 347999999986422 23456799997 5567788
Q ss_pred CCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCC
Q 000753 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1302)
Q Consensus 954 ~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEP 1033 (1302)
.+|++|++.+...++. ...++..+.+.++++.+++.+..++.+ ..||||||||++||++|+.+|++|+||||
T Consensus 109 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP 180 (236)
T cd03267 109 DLPVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEP 180 (236)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999999987654331 223334456788999999988777764 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1034 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
|+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 181 t~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 181 TIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999998754 899999999986 56778999999985 7887654
No 255
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=6.8e-35 Score=323.15 Aligned_cols=204 Identities=34% Similarity=0.514 Sum_probs=170.7
Q ss_pred cceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC---CCCCccceEEECCcccCCCCccceEEEEccCCCCCCC
Q 000753 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG---KDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGE 259 (1302)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~---~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 259 (1302)
.+++|+|+|+++++|++++|+||||||||||+++|+|.++ ++ +|+|.++|+++.....++.++|++|++.+++.
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~ 95 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPG 95 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcC
Confidence 3569999999999999999999999999999999999998 65 99999999887543446789999999999999
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHH-HHHHcCCcccccccccCc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDY-VLKILGLDICADTMVGDE 338 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vg~~ 338 (1302)
+||+||+.|+....+..... .+. .....+. .++.+++++..++.+++
T Consensus 96 ~tv~enl~~~~~~~~~~~~~------------------~~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~- 143 (226)
T cd03234 96 LTVRETLTYTAILRLPRKSS------------------DAI-------------RKKRVEDVLLRDLALTRIGGNLVKG- 143 (226)
T ss_pred CcHHHHHHHHHHhhcccccc------------------hHH-------------HHHHHHHHHHHhhcchhhhcccccC-
Confidence 99999999865432110000 000 0011233 78888888777777765
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEec
Q 000753 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1302)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~ 418 (1302)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+. +.|++++.|++..++.+++|++++|+
T Consensus 144 ----LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~-~~tiii~sh~~~~~~~~~~d~i~~l~ 218 (226)
T cd03234 144 ----ISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARR-NRIVILTIHQPRSDLFRLFDRILLLS 218 (226)
T ss_pred ----cCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEEecCCCHHHHHhCCEEEEEe
Confidence 9999999999999999999999999999999999999999999998764 78999998887668999999999999
Q ss_pred CCeEEEEc
Q 000753 419 EGQIVYQG 426 (1302)
Q Consensus 419 ~G~iv~~G 426 (1302)
+|+++++|
T Consensus 219 ~G~i~~~g 226 (226)
T cd03234 219 SGEIVYSG 226 (226)
T ss_pred CCEEEecC
Confidence 99999876
No 256
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-35 Score=327.11 Aligned_cols=219 Identities=21% Similarity=0.310 Sum_probs=173.5
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCC---CCceeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~---~~g~~~G~i~i~g 930 (1302)
.++++|+++.++ .+.+|+|||+++++||++||+||||||||||+++|+|.. +..+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 456777776542 246999999999999999999999999999999999952 2112379999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1302)
.+... ...++.++|++|++.+++ .|+.||+.+....+.. ...+...+.++++++.+++.+....... ..+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLK-ESAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhh-CCcc
Confidence 87642 234567999999988887 6999999876543311 1122334567899999998642211111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000753 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1302)
Q Consensus 1006 ~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~ 1085 (1302)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||++||+++ ++.+.||++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 4899999999986 56788999999985 78
Q ss_pred EEEecCC
Q 000753 1086 VIYAGPL 1092 (1302)
Q Consensus 1086 ~~~~g~~ 1092 (1302)
+++.|+.
T Consensus 223 ~~~~~~~ 229 (250)
T PRK14245 223 MVEYDDT 229 (250)
T ss_pred EEEECCH
Confidence 9999875
No 257
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=9.7e-35 Score=330.06 Aligned_cols=207 Identities=22% Similarity=0.350 Sum_probs=173.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1302)
+.+|+|||++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 45899999999999999999999999999999999999886 999999998875432 245799999999999
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
+.+||.||+.+....... + .. . .....++.+++.+||++..++.+++
T Consensus 97 ~~~tv~enl~~~~~~~~~---~------~~-----------~-------------~~~~~~~~~l~~~gl~~~~~~~~~~ 143 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQ---L------PA-----------P-------------LLHSTVMMKLEAVGLRGAAKLMPSE 143 (269)
T ss_pred CCCCHHHHHHHHHHHccC---C------CH-----------H-------------HHHHHHHHHHHHcCChhhhhCChhh
Confidence 999999999875321100 0 00 0 0011245678899999888888876
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|
T Consensus 144 -----LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~-~~~~~~~d~v~~l 217 (269)
T PRK11831 144 -----LSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDV-PEVLSIADHAYIV 217 (269)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCH-HHHHHhhCEEEEE
Confidence 9999999999999999999999999999999999999999999998765567888887664 5788899999999
Q ss_pred cCCeEEEEcChhHHH
Q 000753 418 SEGQIVYQGPRDNVL 432 (1302)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1302)
++|++++.|+++++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 258
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=6.9e-35 Score=344.43 Aligned_cols=209 Identities=25% Similarity=0.407 Sum_probs=176.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 260 (1302)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|. +|+|.++|+++.... .++.++||+|++.+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 46999999999999999999999999999999999999987 999999999876543 246799999999998899
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
||+||+.++..-... .+. . .. .+....++.+++.+||.+..|+.+.+
T Consensus 93 tv~e~v~~~~~~~~~--~~~-------------~-~~--------------~~~~~~v~~~le~vgl~~~~~~~~~~--- 139 (402)
T PRK09536 93 DVRQVVEMGRTPHRS--RFD-------------T-WT--------------ETDRAAVERAMERTGVAQFADRPVTS--- 139 (402)
T ss_pred CHHHHHHhccchhcc--ccc-------------C-CC--------------HHHHHHHHHHHHHcCCchhhcCChhh---
Confidence 999999885321100 000 0 00 00122457789999999888888876
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
|||||||||.|||||+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++.|++ .++.++||++++|++|
T Consensus 140 --LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g~TIIivsHdl-~~~~~~adrii~l~~G 215 (402)
T PRK09536 140 --LSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DGKTAVAAIHDL-DLAARYCDELVLLADG 215 (402)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEECCH-HHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999986 477888877654 6888999999999999
Q ss_pred eEEEEcChhHHH
Q 000753 421 QIVYQGPRDNVL 432 (1302)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1302)
+++++|+++++.
T Consensus 216 ~iv~~G~~~ev~ 227 (402)
T PRK09536 216 RVRAAGPPADVL 227 (402)
T ss_pred EEEEecCHHHHh
Confidence 999999998864
No 259
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-35 Score=334.80 Aligned_cols=217 Identities=24% Similarity=0.353 Sum_probs=175.0
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|+++.++.. ....+.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~--------~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAG--------TPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCC--------CccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 5678887665310 0001359999999999999999999999999999999999765 35799999998753
Q ss_pred h-------hhhcceeEEeccCC--CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000753 935 Q-------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGV 1004 (1302)
Q Consensus 935 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 1004 (1302)
. ..+++.++|++|++ .+++ .||+||+.+..... ....++..+.++++++.++|. ...+.. +
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN-----P 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 23456799999996 3444 69999998764322 122334445678899999996 345554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000753 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1302)
Q Consensus 1005 ~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG 1084 (1302)
..||||||||++||+||+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|++ |
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G 221 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-G 221 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999777999999999986 56678999999985 7
Q ss_pred EEEEecCC
Q 000753 1085 RVIYAGPL 1092 (1302)
Q Consensus 1085 ~~~~~g~~ 1092 (1302)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (280)
T PRK13649 222 KLVLSGKP 229 (280)
T ss_pred EEEEeCCH
Confidence 88888875
No 260
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4e-35 Score=320.06 Aligned_cols=192 Identities=28% Similarity=0.341 Sum_probs=162.5
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCC-CCCCCCH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDL-HHGEMTV 262 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 262 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 46999999999999999999999999999999999999887 9999999988754333567999999974 3446799
Q ss_pred HHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCC
Q 000753 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1302)
Q Consensus 263 rE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1302)
+||+.+.....+ . ....++.+++.+||++..++.+++
T Consensus 90 ~e~l~~~~~~~~----------------------~----------------~~~~~~~~l~~~~l~~~~~~~~~~----- 126 (205)
T cd03226 90 REELLLGLKELD----------------------A----------------GNEQAETVLKDLDLYALKERHPLS----- 126 (205)
T ss_pred HHHHhhhhhhcC----------------------c----------------cHHHHHHHHHHcCCchhcCCCchh-----
Confidence 999987532110 0 001245688999999888888876
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeE
Q 000753 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1302)
Q Consensus 343 LSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~i 422 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|++++.|++ .++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~tii~~sH~~-~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQ-GKAVIVITHDY-EFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCH-HHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998754 77888887765 467789999999999997
Q ss_pred E
Q 000753 423 V 423 (1302)
Q Consensus 423 v 423 (1302)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 261
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-35 Score=323.84 Aligned_cols=201 Identities=27% Similarity=0.399 Sum_probs=171.5
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChh-hhcceeEEeccCCCCCCCCCHH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE-TFARVSGYCEQNDIHSPYVTVY 958 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~ 958 (1302)
+.+|+|+|++++||++++|+|+||||||||+++|+|..+ +..|+|.++|.+.... ..++.+||++|++.+++.+|+.
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVF 90 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcceEEEecccccCCCCcHH
Confidence 469999999999999999999999999999999999765 3479999999876431 2346799999999999899999
Q ss_pred HHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCC
Q 000753 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1302)
Q Consensus 959 E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD 1038 (1302)
||+.+....+. .......+.++++++.+++.+..++. +..||+|||||++|||+|+.+|++|+|||||+|||
T Consensus 91 ~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS~G~~qrl~laral~~~p~llllDEP~~gLD 162 (232)
T cd03300 91 ENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRK-----PSQLSGGQQQRVAIARALVNEPKVLLLDEPLGALD 162 (232)
T ss_pred HHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 99987654331 22333445678999999998877765 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1039 ARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
+.++..+.+.|++++++ |+|||+++|++. ++.+.||++++|++ |++++.|+.
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 163 LKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999998764 899999999985 56788999999985 788888763
No 262
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=3.9e-35 Score=320.54 Aligned_cols=190 Identities=24% Similarity=0.357 Sum_probs=161.8
Q ss_pred cceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC---h----hhhcceeEEeccCCCC
Q 000753 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN---Q----ETFARVSGYCEQNDIH 951 (1302)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~---~----~~~~~~~gyv~Q~~~~ 951 (1302)
++.+|+||||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. . ...++.++|++|++.+
T Consensus 10 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 87 (206)
T TIGR03608 10 DKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFAL 87 (206)
T ss_pred CEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhh
Confidence 3569999999999999999999999999999999999765 35799999998742 1 1245679999999999
Q ss_pred CCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcccc
Q 000753 952 SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1302)
Q Consensus 952 ~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLD 1031 (1302)
++.+|++||+.+..... .....+..+.++++++.+++.+..++.+ .+||+|||||++||+||+.+|++|+||
T Consensus 88 ~~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllD 159 (206)
T TIGR03608 88 IENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILAD 159 (206)
T ss_pred ccCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEe
Confidence 99999999998865432 1223344566889999999987777663 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEE
Q 000753 1032 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1302)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l 1080 (1302)
|||+|||+.++..+.+.|+++.++|.|||++||++. ..+.||++++|
T Consensus 160 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 160 EPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 999999999999999999998777999999999975 44679998764
No 263
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-35 Score=361.84 Aligned_cols=221 Identities=23% Similarity=0.309 Sum_probs=183.3
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.+ +++.+|+||||+|++||++||+||||||||||+++|+|...+++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~-------------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTF-------------GGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEe-------------CCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 36778877654 23469999999999999999999999999999999999765323579999999876
Q ss_pred Chh----hhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000753 934 NQE----TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1302)
Q Consensus 934 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1302)
... ..++.+|||+|++.+++.+||+||+.+....+.......++..+.++++++.+++.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 421 234669999999999999999999988653321111123334456889999999987777764 47999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000753 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1302)
Q Consensus 1010 GqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~ 1089 (1302)
|||||++||+||+.+|+||||||||+|||+.++..+++.|++++++|.|||++||+++ .+...||++++|++ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999878999999999986 56678999999985 789999
Q ss_pred cCCCc
Q 000753 1090 GPLGH 1094 (1302)
Q Consensus 1090 g~~~~ 1094 (1302)
|+..+
T Consensus 225 ~~~~~ 229 (506)
T PRK13549 225 RPAAG 229 (506)
T ss_pred ccccc
Confidence 88764
No 264
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-35 Score=331.74 Aligned_cols=215 Identities=26% Similarity=0.351 Sum_probs=178.0
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++. +.+.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEec
Confidence 4788888765421 12469999999999999999999999999999999999765 3479999999876
Q ss_pred Ch---hhhcceeEEeccCCC-CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000753 934 NQ---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1302)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1302)
.. ..+++.+||++|++. .++.+||+||+.+..... ....++....+.++++.++|.+..++.+ ..|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 42 245677999999974 567799999998764322 1223334556889999999988777763 57999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000753 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1302)
Q Consensus 1010 GqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~ 1088 (1302)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ ++|||++||+++ ++ ..||++++|.+ |+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998765 599999999986 34 57999999985 78888
Q ss_pred ecCC
Q 000753 1089 AGPL 1092 (1302)
Q Consensus 1089 ~g~~ 1092 (1302)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 265
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=8.6e-35 Score=337.86 Aligned_cols=209 Identities=21% Similarity=0.284 Sum_probs=174.2
Q ss_pred cceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCC--
Q 000753 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHD-- 254 (1302)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d-- 254 (1302)
..++|+|||++|++||+++|+|+||||||||+++|+|.++++ +|+|.++|.++.... .++.++||+|++
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~ 109 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLA 109 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchh
Confidence 357999999999999999999999999999999999999886 999999999886543 245799999997
Q ss_pred CCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc-ccccc
Q 000753 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADT 333 (1302)
Q Consensus 255 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 333 (1302)
.++|.+||.||+.+..+....+ +.+. +....++.+++.+||. +..++
T Consensus 110 ~l~p~~tv~~~i~~~l~~~~~~--------~~~~------------------------~~~~~~~~~l~~vgl~~~~~~~ 157 (331)
T PRK15079 110 SLNPRMTIGEIIAEPLRTYHPK--------LSRQ------------------------EVKDRVKAMMLKVGLLPNLINR 157 (331)
T ss_pred hcCCCCCHHHHHHHHHHHhccC--------CCHH------------------------HHHHHHHHHHHHcCCChHHhcC
Confidence 5888999999998754321100 0000 0112345688999994 45677
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCe
Q 000753 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1302)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ 413 (1302)
.+.+ |||||||||+||+||+.+|+++++||||+|||..++.++.+.|+++.+..+.|++++.|+ ...+.+++|+
T Consensus 158 ~p~~-----LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHd-l~~~~~~~dr 231 (331)
T PRK15079 158 YPHE-----FSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHD-LAVVKHISDR 231 (331)
T ss_pred Cccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhCCE
Confidence 7765 999999999999999999999999999999999999999999999987667787777665 4578889999
Q ss_pred EEEecCCeEEEEcChhHHH
Q 000753 414 IILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1302)
|++|++|++++.|+.+++.
T Consensus 232 i~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 232 VLVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEEECCEEEEEcCHHHHH
Confidence 9999999999999998875
No 266
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.3e-34 Score=323.14 Aligned_cols=206 Identities=27% Similarity=0.401 Sum_probs=172.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc--cceEEEEccCCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP--QRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lT 261 (1302)
+++|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 46999999999999999999999999999999999999887 9999999988754321 257999999998888999
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
|+||+.+.....+.. .. +....++.+++.+||++..++.+++
T Consensus 91 ~~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~~---- 132 (236)
T TIGR03864 91 VRQNLRYHAALHGLS----------RA------------------------EARERIAALLARLGLAERADDKVRE---- 132 (236)
T ss_pred HHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhcCChhh----
Confidence 999998754321100 00 0011245678899999888888876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++. .+|++++|++|+
T Consensus 133 -LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~-~~d~i~~l~~G~ 209 (236)
T TIGR03864 133 -LNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EIE-ADDRLVVLHRGR 209 (236)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hHh-hCCEEEEEeCCe
Confidence 99999999999999999999999999999999999999999999987645788888887764 454 599999999999
Q ss_pred EEEEcChhHHHH
Q 000753 422 IVYQGPRDNVLE 433 (1302)
Q Consensus 422 iv~~G~~~~~~~ 433 (1302)
+++.|+.+++.+
T Consensus 210 i~~~~~~~~~~~ 221 (236)
T TIGR03864 210 VLADGAAAELRG 221 (236)
T ss_pred EEEeCCHHHHHH
Confidence 999999887653
No 267
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-35 Score=316.60 Aligned_cols=196 Identities=33% Similarity=0.607 Sum_probs=161.5
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc-eeEEEEEEcCcc
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYP 932 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~g~~ 932 (1302)
.++|+|++|.++.+ .+++.+|+|+||+|++||+++|+||||||||||+++|+|...+. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57899999988642 13457999999999999999999999999999999999975522 458999999987
Q ss_pred CCh--hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000753 933 KNQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1302)
Q Consensus 933 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1302)
... ...++.++|++|++.+++.+||+||+.+..... .+.. +..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 235667999999999999999999998753211 1222 3479999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000753 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1302)
Q Consensus 1011 qrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~ 1089 (1302)
||||++||+||+.+|++|||||||+|||+.++..+++.|++++++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 677777665543367788999999986 788765
Q ss_pred c
Q 000753 1090 G 1090 (1302)
Q Consensus 1090 g 1090 (1302)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 268
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3e-35 Score=291.69 Aligned_cols=200 Identities=29% Similarity=0.436 Sum_probs=172.2
Q ss_pred ccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh---h---hh-cceeEEeccC
Q 000753 876 GEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---E---TF-ARVSGYCEQN 948 (1302)
Q Consensus 876 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~---~~-~~~~gyv~Q~ 948 (1302)
......||++|++.|++||-+||+|||||||||||-+|+|...+ .+|+|.+.|++... + .+ .+.+|+|+|.
T Consensus 19 ~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~--ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQS 96 (228)
T COG4181 19 GEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDP--SSGEVRLLGQPLHKLDEDARAALRARHVGFVFQS 96 (228)
T ss_pred CCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCC--CCceEEEcCcchhhcCHHHHHHhhccceeEEEEe
Confidence 44567899999999999999999999999999999999998763 48999999988643 1 22 3679999999
Q ss_pred CCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 000753 949 DIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII 1028 (1302)
Q Consensus 949 ~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~il 1028 (1302)
..+.|++|..||+.....++.... ........+.|+.+||.+..+.+ +.+|||||+|||+||||++..|+||
T Consensus 97 F~Lip~ltAlENV~lPleL~ge~~---~~~~~~A~~lL~~vGLg~Rl~Hy-----P~qLSGGEQQRVAiARAfa~~P~vL 168 (228)
T COG4181 97 FHLIPNLTALENVALPLELRGESS---ADSRAGAKALLEAVGLGKRLTHY-----PAQLSGGEQQRVALARAFAGRPDVL 168 (228)
T ss_pred eeccccchhhhhccchhhhcCCcc---ccHHHHHHHHHHHhCcccccccC-----ccccCchHHHHHHHHHHhcCCCCEE
Confidence 999999999999999888775322 22334477899999998877776 4589999999999999999999999
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000753 1029 FMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1302)
Q Consensus 1029 lLDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~ 1088 (1302)
|.||||-+||..+...|.+++-.+. +.|.|.|++||||. +...|||++-|.. |+++.
T Consensus 169 fADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~~ 226 (228)
T COG4181 169 FADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLVE 226 (228)
T ss_pred eccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceecc
Confidence 9999999999999999999998885 45999999999985 6788999999985 77763
No 269
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=6.2e-35 Score=320.47 Aligned_cols=198 Identities=24% Similarity=0.308 Sum_probs=166.6
Q ss_pred eecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh-hhhcceeEEeccCCCCCCCCCHHHH
Q 000753 882 LLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVYES 960 (1302)
Q Consensus 882 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~ 960 (1302)
+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 4679999999999999999999999999999999765 347999999987632 2345679999999999999999999
Q ss_pred HHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHH
Q 000753 961 LLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1040 (1302)
Q Consensus 961 l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~ 1040 (1302)
+.+...... .. .....+.++++++.+++.+..++. +..||||||||++|||+|+.+|++|+|||||+|||+.
T Consensus 91 ~~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--KL-NAEQQEKVVDAAQQVGIADYLDRL-----PEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--Cc-cHHHHHHHHHHHHHcCcHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 986532211 11 122345678899999998777766 4579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000753 1041 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1302)
Q Consensus 1041 ~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~ 1091 (1302)
++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|.+ |+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998754 899999999975 56678999999985 78888764
No 270
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=4.5e-35 Score=330.75 Aligned_cols=206 Identities=31% Similarity=0.411 Sum_probs=171.0
Q ss_pred cceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh---hhhcceeEEeccCCCCCCCC
Q 000753 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYV 955 (1302)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~l 955 (1302)
++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +..|+|.++|.+... ...++.++|++|++.+++.+
T Consensus 13 ~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 13 GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 3569999999999999999999999999999999999765 347999999987532 23455699999998878889
Q ss_pred CHHHHHHHHHHhhCC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 000753 956 TVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1302)
Q Consensus 956 Tv~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPT 1034 (1302)
||.||+.+....... ......+..+.+.++++.+++.+..++.+ ..||||||||++||+||+.+|++++|||||
T Consensus 91 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 165 (256)
T TIGR03873 91 TVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGGERQRVHVARALAQEPKLLLLDEPT 165 (256)
T ss_pred CHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCcc
Confidence 999999875311100 00111233456889999999987777763 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
+|||+.+...+++.|+++.++|.|||++||+++ ++.+.||++++|++ |+++..|+..
T Consensus 166 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 222 (256)
T TIGR03873 166 NHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAGPPR 222 (256)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEecCHH
Confidence 999999999999999999877899999999986 57788999999985 7888888753
No 271
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-35 Score=330.32 Aligned_cols=216 Identities=25% Similarity=0.308 Sum_probs=178.7
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 5788888875521 11358999999999999999999999999999999999765 3479999999876
Q ss_pred Ch---hhhcceeEEeccCCC-CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000753 934 NQ---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1302)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1302)
.. ...++.++|++|++. +++..|+.+|+.+..... ....+...+.++++++.+++.+..+.. +..||+
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCH
Confidence 32 345677999999985 677889999998764322 123334455688999999998877765 457999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000753 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1302)
Q Consensus 1010 GqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~ 1088 (1302)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++. .+|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 454 5999999985 89999
Q ss_pred ecCCC
Q 000753 1089 AGPLG 1093 (1302)
Q Consensus 1089 ~g~~~ 1093 (1302)
.|+..
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 88753
No 272
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=9.1e-35 Score=325.23 Aligned_cols=205 Identities=20% Similarity=0.336 Sum_probs=172.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC-----CccceEEEEccCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLHHG 258 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~ 258 (1302)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 45999999999999999999999999999999999999887 99999999987542 12457999999999999
Q ss_pred CCCHHHHHHhhhhc-cCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 259 EMTVRETLDFSGRC-LGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 259 ~lTVrE~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
.+||+||+.|+... .+.. .. +....++.+++.+||++..|..+.+
T Consensus 91 ~~tv~~~l~~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~~ 136 (240)
T PRK09493 91 HLTALENVMFGPLRVRGAS----------KE------------------------EAEKQARELLAKVGLAERAHHYPSE 136 (240)
T ss_pred CCcHHHHHHhHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCChHHHhcChhh
Confidence 99999999875321 0000 00 0011346688899998877877765
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++. ++|+|++.|++ .++..++|++++|
T Consensus 137 -----LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~tiii~sH~~-~~~~~~~d~i~~l 209 (240)
T PRK09493 137 -----LSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEE-GMTMVIVTHEI-GFAEKVASRLIFI 209 (240)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc-CCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998753 78888887765 4778899999999
Q ss_pred cCCeEEEEcChhHHH
Q 000753 418 SEGQIVYQGPRDNVL 432 (1302)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1302)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999988764
No 273
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=328.93 Aligned_cols=216 Identities=23% Similarity=0.291 Sum_probs=175.6
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC---ceeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1302)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 578888887652 24699999999999999999999999999999999996542 12579999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL----NDSMVGL 1001 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~~g~ 1001 (1302)
.++.. ..+++.+||++|++.+++. ||.||+.+....+.. .....+..+.++++++.+++.+. .+..
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 160 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHEP--- 160 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhCC---
Confidence 87632 2345679999999888875 999999886543311 11223334567899999999642 2333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ .+...||++++|+
T Consensus 161 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~ 236 (267)
T PRK14235 161 --GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH 236 (267)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 789999999986 5667899999998
Q ss_pred cCcEEEEecCC
Q 000753 1082 RGGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1302)
+ |+++..|+.
T Consensus 237 ~-G~i~~~g~~ 246 (267)
T PRK14235 237 L-GNLVEVGDT 246 (267)
T ss_pred C-CEEEEeCCH
Confidence 5 789988874
No 274
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=325.46 Aligned_cols=220 Identities=20% Similarity=0.293 Sum_probs=175.6
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCC--Cc-eeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~g-~~~G~i~i~g 930 (1302)
.+.++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 467778776542 2469999999999999999999999999999999999753 11 2479999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1302)
.++.. ..+++.++|++|++.+++.+|++||+.+...... .....+.++.++++++.+++......... ..+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLK-SNAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcC
Confidence 87532 2456779999999999999999999987543221 11223334567889999998542111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000753 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1302)
Q Consensus 1006 ~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~ 1085 (1302)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.||++++|.+ |+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999975 689999999986 56688999999985 89
Q ss_pred EEEecCC
Q 000753 1086 VIYAGPL 1092 (1302)
Q Consensus 1086 ~~~~g~~ 1092 (1302)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14256 225 LVECGET 231 (252)
T ss_pred EEEeCCH
Confidence 9998875
No 275
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.1e-34 Score=337.32 Aligned_cols=225 Identities=20% Similarity=0.281 Sum_probs=180.4
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc-eeEEEEEEcCcc
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYP 932 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~g~~ 932 (1302)
.++++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|..... ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 47888887665321 12356999999999999999999999999999999999976531 237999999987
Q ss_pred CCh---hh---hc-ceeEEeccCC--CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000753 933 KNQ---ET---FA-RVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPG 1003 (1302)
Q Consensus 933 ~~~---~~---~~-~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~ 1003 (1302)
+.. .. ++ +.++||+|++ .+.|.+|+.+++.+...... ....++..+.+.++++.++|.+..+.. + ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 642 22 22 4799999998 68899999999877654332 233445556788999999997533221 1 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1004 ~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
+.+||||||||++||+||+.+|++||+||||+|||+.++..|+++|+++.++ |.|||++|||++ .+...+|++++|.+
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 5689999999999999999999999999999999999999999999999764 899999999976 45678999999985
Q ss_pred CcEEEEecCCC
Q 000753 1083 GGRVIYAGPLG 1093 (1302)
Q Consensus 1083 gG~~~~~g~~~ 1093 (1302)
|++++.|+..
T Consensus 238 -G~ive~g~~~ 247 (330)
T PRK09473 238 -GRTMEYGNAR 247 (330)
T ss_pred -CEEEEECCHH
Confidence 8999999853
No 276
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=4.5e-34 Score=320.89 Aligned_cols=173 Identities=25% Similarity=0.323 Sum_probs=135.6
Q ss_pred ecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChhhhcceeEEeccCCCCCCCCCHHHHHH
Q 000753 883 LHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLL 962 (1302)
Q Consensus 883 L~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~ 962 (1302)
|+-=.++|..||+++++||||-||||+.++|+|..++ .+|. .. .-.++|=||--.--...||++.|.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikP--deg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKP--DEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhccccC--CCCC----Cc-------cceEeecceeecCCCCCcHHHHHH
Confidence 4444578899999999999999999999999996553 2444 11 123688888765556789999775
Q ss_pred HHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHH
Q 000753 963 YSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1042 (1302)
Q Consensus 963 ~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~ 1042 (1302)
-...-+... .-...++++-++|.++.++.+ .+|||||.|||+||.+|.++.++.+||||++.||.+.+
T Consensus 424 ~~~~~~~~~-------s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFGS-------SYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhccc-------chhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 432211111 123467888999999998885 47999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1043 AIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1043 ~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
..+-+.||+... +++|.+++-||..+ +--..|++++..
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 999999999875 47999999999753 444678888775
No 277
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-35 Score=320.27 Aligned_cols=202 Identities=23% Similarity=0.307 Sum_probs=181.6
Q ss_pred eeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh---h---hh-cceeEEeccCCCCCC
Q 000753 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---E---TF-ARVSGYCEQNDIHSP 953 (1302)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~---~~-~~~~gyv~Q~~~~~~ 953 (1302)
.-++|+|++|+.||++.|||-||||||||+++|.+... +..|+|.++|.++.. . .+ ++.++.|+|...++|
T Consensus 42 vGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlP 119 (386)
T COG4175 42 VGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLP 119 (386)
T ss_pred EeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhcccc
Confidence 46899999999999999999999999999999999776 458999999987632 2 22 357999999999999
Q ss_pred CCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCC
Q 000753 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1302)
Q Consensus 954 ~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEP 1033 (1302)
+.||.||+.|+..++ ..+++++++++.++|+.+||....+++ +++|||||||||.|||||+.+|+||+||||
T Consensus 120 hrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~y-----p~eLSGGMqQRVGLARAla~~~~IlLMDEa 191 (386)
T COG4175 120 HRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKY-----PNELSGGMQQRVGLARALANDPDILLMDEA 191 (386)
T ss_pred chhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcC-----cccccchHHHHHHHHHHHccCCCEEEecCc
Confidence 999999999998776 567788899999999999999999998 458999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCc
Q 000753 1034 TSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1302)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~ 1094 (1302)
+|.|||--+..+++.|.++.+ -++|||++|||++ |.+..-|||.+|+ +|+++..|++.+
T Consensus 192 FSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~e 251 (386)
T COG4175 192 FSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPEE 251 (386)
T ss_pred hhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHHH
Confidence 999999999999999999864 4899999999997 7888999999997 589999999754
No 278
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=6e-35 Score=321.90 Aligned_cols=198 Identities=31% Similarity=0.453 Sum_probs=168.0
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC--CccceEEEEccCCCCCCCCCH
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF--VPQRTCAYISQHDLHHGEMTV 262 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lTV 262 (1302)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999999887 99999999887542 124679999999999999999
Q ss_pred HHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCC
Q 000753 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1302)
Q Consensus 263 rE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1302)
+||+.+.....+.. .. +....++.+++.+||++..++.+++
T Consensus 96 ~e~l~~~~~~~~~~--------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~----- 136 (218)
T cd03266 96 RENLEYFAGLYGLK--------------------GD--------------ELTARLEELADRLGMEELLDRRVGG----- 136 (218)
T ss_pred HHHHHHHHHHcCCC--------------------HH--------------HHHHHHHHHHHHcCCHHHHhhhhhh-----
Confidence 99998753321100 00 0112356688999999888888776
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeE
Q 000753 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1302)
Q Consensus 343 LSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~i 422 (1302)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH~~-~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-LGKCILFSTHIM-QEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999865 377888887766 478889999999999999
Q ss_pred EEEc
Q 000753 423 VYQG 426 (1302)
Q Consensus 423 v~~G 426 (1302)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 279
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-35 Score=330.37 Aligned_cols=208 Identities=26% Similarity=0.383 Sum_probs=169.8
Q ss_pred cceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc------eeEEEEEEcCccCCh---hhhcceeEEeccCC
Q 000753 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YIEGDIKISGYPKNQ---ETFARVSGYCEQND 949 (1302)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~ 949 (1302)
++.+|+|||++|++||+++|+||||||||||+++|+|..++. ..+|+|.++|.+... ..+++.++|++|++
T Consensus 13 ~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~ 92 (272)
T PRK13547 13 HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAA 92 (272)
T ss_pred CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccC
Confidence 346999999999999999999999999999999999975421 127999999987532 33456689999998
Q ss_pred CCCCCCCHHHHHHHHHHhhC-CCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHh------
Q 000753 950 IHSPYVTVYESLLYSAWLRL-SSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELV------ 1022 (1302)
Q Consensus 950 ~~~~~lTv~E~l~~~~~lr~-~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~------ 1022 (1302)
..++.+|++||+.+...... .......+..+.++++++.+++.+..++. +..||||||||++|||+|+
T Consensus 93 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~~~~~ 167 (272)
T PRK13547 93 QPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----VTTLSGGELARVQFARVLAQLWPPH 167 (272)
T ss_pred CCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcccccc
Confidence 76667999999987532111 00111123345688999999998776665 4579999999999999999
Q ss_pred ---hCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1023 ---ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1023 ---~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++...||++++|.+ |++++.|+..
T Consensus 168 ~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 168 DAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHADRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred ccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CeEEEecCHH
Confidence 599999999999999999999999999998765 899999999986 56678999999985 7899888754
No 280
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-35 Score=318.19 Aligned_cols=222 Identities=25% Similarity=0.338 Sum_probs=195.1
Q ss_pred cceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-------cceEEEEccCCC
Q 000753 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDL 255 (1302)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 255 (1302)
..--++|+|+.++.||+..|||-||||||||+++|.++.+|+ +|+|.++|.++..... ++.+++|+|+-.
T Consensus 40 ~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~Fa 116 (386)
T COG4175 40 LVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFA 116 (386)
T ss_pred cEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhc
Confidence 345689999999999999999999999999999999999997 9999999998876543 368999999999
Q ss_pred CCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccc
Q 000753 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1302)
Q Consensus 256 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1302)
++|+.||.||..|+.+.+|.... +.+....+.|+..||+...+..+
T Consensus 117 LlPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~yp 162 (386)
T COG4175 117 LLPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYADKYP 162 (386)
T ss_pred cccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhcCc
Confidence 99999999999999999886421 11224567899999999999999
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEE
Q 000753 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1302)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ii 415 (1302)
.+ ||||+||||.+||||..+|+|||||||+|+|||--+.++.+.|.++.+.+++|+|... |...|.+++.|+|.
T Consensus 163 ~e-----LSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFit-HDLdEAlriG~rIa 236 (386)
T COG4175 163 NE-----LSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFIT-HDLDEALRIGDRIA 236 (386)
T ss_pred cc-----ccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEe-cCHHHHHhccceEE
Confidence 87 9999999999999999999999999999999999999999999999888888887765 56789999999999
Q ss_pred EecCCeEEEEcChhHHHHHHHhcCCCCCCCCChHHHHHhh
Q 000753 416 LLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEV 455 (1302)
Q Consensus 416 lL~~G~iv~~G~~~~~~~~f~~lG~~~p~~~~~adfl~ev 455 (1302)
+|.+|+||..|+++|++. .|.+.-+++|...+
T Consensus 237 imkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 237 IMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 999999999999999974 35555566666554
No 281
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=335.83 Aligned_cols=216 Identities=21% Similarity=0.367 Sum_probs=174.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC-------------------Ccc
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------------------VPQ 244 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------------------~~~ 244 (1302)
+++|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 45999999999999999999999999999999999999987 99999999876432 124
Q ss_pred ceEEEEccCC--CCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHH
Q 000753 245 RTCAYISQHD--LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVL 322 (1302)
Q Consensus 245 ~~~~yv~Q~d--~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (1302)
+.++||+|++ .+++ .||+||+.|+....+.. . . +....++.++
T Consensus 116 ~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~~~~----------~----------~--------------~~~~~~~~~l 160 (320)
T PRK13631 116 RRVSMVFQFPEYQLFK-DTIEKDIMFGPVALGVK----------K----------S--------------EAKKLAKFYL 160 (320)
T ss_pred hcEEEEEECchhcccc-chHHHHHHhhHHhcCCC----------H----------H--------------HHHHHHHHHH
Confidence 6799999986 4565 59999998864321100 0 0 0112345688
Q ss_pred HHcCCc-ccccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEe
Q 000753 323 KILGLD-ICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALL 401 (1302)
Q Consensus 323 ~~lgL~-~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~ 401 (1302)
+.+||+ +..++.+.+ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. +.|+|++.|
T Consensus 161 ~~~gL~~~~~~~~~~~-----LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~-g~TiiivtH 234 (320)
T PRK13631 161 NKMGLDDSYLERSPFG-----LSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKAN-NKTVFVITH 234 (320)
T ss_pred HHcCCChhHhcCCccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHC-CCEEEEEec
Confidence 999997 456666655 9999999999999999999999999999999999999999999998753 788888877
Q ss_pred cCchhHHhhcCeEEEecCCeEEEEcChhHHHH---HHHhcCCCCCC
Q 000753 402 QPAPETYDLFDDIILLSEGQIVYQGPRDNVLE---FFEHMGFKCPE 444 (1302)
Q Consensus 402 q~~~e~~~~~D~iilL~~G~iv~~G~~~~~~~---~f~~lG~~~p~ 444 (1302)
++ .++.+++|+|++|++|++++.|+++++.. .++..|+.+|.
T Consensus 235 d~-~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 235 TM-EHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred CH-HHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 65 46778999999999999999999988742 34445555544
No 282
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.1e-35 Score=314.06 Aligned_cols=190 Identities=59% Similarity=0.963 Sum_probs=159.7
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.++.. ..++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 35788887765311 012469999999999999999999999999999999999642223579999999876
Q ss_pred ChhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000753 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1302)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1302)
. ...++.++|++|++.+++.+|++||+.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 5 445677999999999999999999998643110 49999999
Q ss_pred HHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1014 Rl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
|++|||||+.+|++|+|||||+|||+.++..+++.|+++++.|+|||++||+++.++...||++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999887799999999998633567899999998647888765
No 283
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-35 Score=334.18 Aligned_cols=219 Identities=20% Similarity=0.304 Sum_probs=175.2
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++... .....+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEc
Confidence 467888887653100 001359999999999999999999999999999999999765 3479999999875
Q ss_pred C--------hhhhcceeEEeccCCCC-CCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000753 934 N--------QETFARVSGYCEQNDIH-SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPG 1003 (1302)
Q Consensus 934 ~--------~~~~~~~~gyv~Q~~~~-~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~ 1003 (1302)
. ...+++.++|++|++.. ....|++||+.|..... ....+...+.+.++++.++|. +..++.
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 2 12345679999999742 22469999998764321 122334445678899999994 566655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1004 ~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
+..||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.||++++|++
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999999875 4899999999986 57788999999985
Q ss_pred CcEEEEecCC
Q 000753 1083 GGRVIYAGPL 1092 (1302)
Q Consensus 1083 gG~~~~~g~~ 1092 (1302)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 789888874
No 284
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=8.4e-35 Score=332.34 Aligned_cols=238 Identities=26% Similarity=0.401 Sum_probs=197.2
Q ss_pred HhhhcCCCCCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceEeeceEEEEeCCeEEEEEc
Q 000753 125 RTDRVGIEIPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLG 204 (1302)
Q Consensus 125 r~~~~g~~~p~i~v~~~~l~v~~~~~~~~~~~pt~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llG 204 (1302)
+-+++.++-|+-.+..|++++- . ...++++|+|+||.+.+|+.++|+|
T Consensus 322 ~~~~m~LP~P~g~L~Ve~l~~~---P-----------------------------Pg~~~pil~~isF~l~~G~~lgIIG 369 (580)
T COG4618 322 AAERMPLPAPQGALSVERLTAA---P-----------------------------PGQKKPILKGISFALQAGEALGIIG 369 (580)
T ss_pred ccCCCCCCCCCceeeEeeeeec---C-----------------------------CCCCCcceecceeEecCCceEEEEC
Confidence 3345667777788888887762 1 1134679999999999999999999
Q ss_pred CCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCcc---ceEEEEccCCCCCCCCCHHHHHHhhhhccCCCchhhH
Q 000753 205 PPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ---RTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYEL 281 (1302)
Q Consensus 205 p~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~ 281 (1302)
|||||||||.++|.|..+|. +|.|.+||.+++..... +.|||.||+-.+|+. ||.|||. |+.
T Consensus 370 PSgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~G-TIaeNIa---Rf~-------- 434 (580)
T COG4618 370 PSGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDG-TIAENIA---RFG-------- 434 (580)
T ss_pred CCCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecCC-cHHHHHH---hcc--------
Confidence 99999999999999999986 99999999998877653 789999999999975 9999993 221
Q ss_pred HHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCChHHHHHHHHHHHHhcCC
Q 000753 282 LAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTA 361 (1302)
Q Consensus 282 ~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p 361 (1302)
++.|.+...+++..++ ..|. ++.|++.+||.||+ .+.+||||||||+++|||++++|
T Consensus 435 --------------~~~d~~kIieAA~lAg-----vHel---Il~lP~GYdT~iG~-~G~~LSgGQRQRIaLARAlYG~P 491 (580)
T COG4618 435 --------------EEADPEKVIEAARLAG-----VHEL---ILRLPQGYDTRIGE-GGATLSGGQRQRIALARALYGDP 491 (580)
T ss_pred --------------ccCCHHHHHHHHHHcC-----hHHH---HHhCcCCccCccCC-CCCCCCchHHHHHHHHHHHcCCC
Confidence 2233344455544433 2343 45699999999996 56779999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEEEEcChhHHHHHH
Q 000753 362 NVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFF 435 (1302)
Q Consensus 362 ~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv~~G~~~~~~~~f 435 (1302)
.+++||||-|.||+.....+.+.+.+... .|.|+|+..|.| .+...+|+|++|++|++-.+|+++|++...
T Consensus 492 ~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvviaHRP--s~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 492 FLVVLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVVIAHRP--SALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred cEEEecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEEEecCH--HHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 99999999999999999999999998876 478888887766 588999999999999999999999998754
No 285
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-35 Score=320.04 Aligned_cols=197 Identities=25% Similarity=0.379 Sum_probs=164.9
Q ss_pred cccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh-------hhhcceeEEeccCC
Q 000753 877 EDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-------ETFARVSGYCEQND 949 (1302)
Q Consensus 877 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~ 949 (1302)
++++.+ |||+++++ |+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++
T Consensus 10 ~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~ 84 (214)
T cd03297 10 LPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQY 84 (214)
T ss_pred cCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCC
Confidence 344445 99999999 9999999999999999999999765 347999999986531 12456799999999
Q ss_pred CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcc
Q 000753 950 IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1029 (1302)
Q Consensus 950 ~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~ill 1029 (1302)
.+++.+|+.||+.+..... .....++.+.++++.+++.+..+.. +..||||||||++||++|+.+|++|+
T Consensus 85 ~~~~~~t~~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lll 154 (214)
T cd03297 85 ALFPHLNVRENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLL 154 (214)
T ss_pred ccCCCCCHHHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999998764321 1223345688999999998766665 45799999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1030 MDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 155 lDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 155 LDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999765 899999999976 46678999999985 7887654
No 286
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=329.63 Aligned_cols=215 Identities=21% Similarity=0.269 Sum_probs=174.2
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC---ceeEEEEEEc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKIS 929 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~ 929 (1302)
..+.++|+++.++ .+.+|+|+||+|++||+++|+||||||||||+++|+|.... .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 4578888887652 24699999999999999999999999999999999997431 1357999999
Q ss_pred CccCC-----hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----ccccccc
Q 000753 930 GYPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVG 1000 (1302)
Q Consensus 930 g~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g 1000 (1302)
|.+.. ....++.++|++|++.+++ .||+||+.+....+. .. ...++.+.++++.+++.. ..+..
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 151 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YT-GDMDELVERSLRKAAVWDECKDKLNES-- 151 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---Cc-HHHHHHHHHHHHHhCCcchhhhhhCCC--
Confidence 98753 2345567999999998887 499999988654331 11 123345678888888742 23333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEE
Q 000753 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1302)
Q Consensus 1001 ~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l 1080 (1302)
+..||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++++ ++|||++||+++ ++...||++++|
T Consensus 152 ---~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 226 (269)
T PRK14259 152 ---GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFF 226 (269)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999986 577899999999
Q ss_pred ec----------CcEEEEecCC
Q 000753 1081 KR----------GGRVIYAGPL 1092 (1302)
Q Consensus 1081 ~~----------gG~~~~~g~~ 1092 (1302)
++ .|++++.|++
T Consensus 227 ~~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 227 NAEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred eccccccccccccceEEEeCCH
Confidence 85 2678888875
No 287
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=327.54 Aligned_cols=224 Identities=21% Similarity=0.277 Sum_probs=179.0
Q ss_pred ccCCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC---ceeEEE
Q 000753 849 PFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGD 925 (1302)
Q Consensus 849 ~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~ 925 (1302)
|..+..+.++|+++.++ .+.+|+|||+++++||++||+|+||||||||+++|+|...+ .+.+|+
T Consensus 15 ~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~ 81 (267)
T PRK14237 15 PEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQ 81 (267)
T ss_pred CCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceE
Confidence 33445688999887652 24699999999999999999999999999999999997542 135799
Q ss_pred EEEcCccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccccccccc
Q 000753 926 IKISGYPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVG 1000 (1302)
Q Consensus 926 i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g 1000 (1302)
|.++|.+... ...++.++|++|++.+++ .||+||+.+..... .....+...+.+.++++.++|.+..+....
T Consensus 82 i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 82 ILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred EEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhhc
Confidence 9999987632 234667999999988887 69999998764321 111233445668889999998532211111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEE
Q 000753 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1302)
Q Consensus 1001 ~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l 1080 (1302)
. .+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.||++++|
T Consensus 159 ~-~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l 235 (267)
T PRK14237 159 K-SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFF 235 (267)
T ss_pred C-CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEE
Confidence 1 256899999999999999999999999999999999999999999999986 4799999999986 577889999999
Q ss_pred ecCcEEEEecCC
Q 000753 1081 KRGGRVIYAGPL 1092 (1302)
Q Consensus 1081 ~~gG~~~~~g~~ 1092 (1302)
++ |++++.|+.
T Consensus 236 ~~-G~i~~~g~~ 246 (267)
T PRK14237 236 YL-GDLIEYDKT 246 (267)
T ss_pred EC-CEEEEeCCH
Confidence 85 899998875
No 288
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-35 Score=332.17 Aligned_cols=220 Identities=21% Similarity=0.281 Sum_probs=178.4
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++... +...+.+|+|||++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEec
Confidence 367888877653110 0012469999999999999999999999999999999999765 3479999999876
Q ss_pred Ch----hhhcceeEEeccCCCC-CCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000753 934 NQ----ETFARVSGYCEQNDIH-SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1302)
Q Consensus 934 ~~----~~~~~~~gyv~Q~~~~-~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1302)
.. ...++.+||++|++.. +...||.|++.|..... .....+.++.++++++.++|.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 42 2346779999999742 33469999998865432 2233444567899999999988877764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEE
Q 000753 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1302)
Q Consensus 1009 gGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~ 1087 (1302)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||++||+++ ++ ..||++++|++ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~-~~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EA-VEADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HH-hcCCEEEEEEC-CEEE
Confidence 9999999999999999999999999999999999999999999975 4999999999986 34 45999999985 7899
Q ss_pred EecCCC
Q 000753 1088 YAGPLG 1093 (1302)
Q Consensus 1088 ~~g~~~ 1093 (1302)
+.|++.
T Consensus 224 ~~g~~~ 229 (280)
T PRK13633 224 MEGTPK 229 (280)
T ss_pred EecCHH
Confidence 888753
No 289
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.6e-34 Score=321.97 Aligned_cols=202 Identities=24% Similarity=0.324 Sum_probs=168.8
Q ss_pred ccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC--CccceEEEEc-cCCCCCC
Q 000753 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF--VPQRTCAYIS-QHDLHHG 258 (1302)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~-Q~d~~~~ 258 (1302)
..+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|++.... ..++.++|++ |++.+++
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 4567999999999999999999999999999999999999887 99999999875332 2245799997 5567788
Q ss_pred CCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCc
Q 000753 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1302)
Q Consensus 259 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 338 (1302)
.+||+|++.+.....+... . +....++.+++.+||++..|+.+++
T Consensus 109 ~~tv~e~l~~~~~~~~~~~--------------------~--------------~~~~~~~~~l~~~gl~~~~~~~~~~- 153 (236)
T cd03267 109 DLPVIDSFYLLAAIYDLPP--------------------A--------------RFKKRLDELSELLDLEELLDTPVRQ- 153 (236)
T ss_pred CCcHHHHHHHHHHHcCCCH--------------------H--------------HHHHHHHHHHHHcCChhHhcCChhh-
Confidence 8999999987543221100 0 0011245678899999988998876
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEec
Q 000753 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1302)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~ 418 (1302)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|.
T Consensus 154 ----LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~-~~~~~~~d~i~~l~ 228 (236)
T cd03267 154 ----LSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYM-KDIEALARRVLVID 228 (236)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCH-HHHHHhCCEEEEEe
Confidence 9999999999999999999999999999999999999999999999775577888887776 47788999999999
Q ss_pred CCeEEEEc
Q 000753 419 EGQIVYQG 426 (1302)
Q Consensus 419 ~G~iv~~G 426 (1302)
+|++++.|
T Consensus 229 ~G~i~~~g 236 (236)
T cd03267 229 KGRLLYDG 236 (236)
T ss_pred CCEEEecC
Confidence 99998765
No 290
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-35 Score=326.45 Aligned_cols=215 Identities=22% Similarity=0.310 Sum_probs=173.9
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC-ceeEEEEEEcCccC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYIEGDIKISGYPK 933 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~-g~~~G~i~i~g~~~ 933 (1302)
+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|.... .+.+|+|.++|.++
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 45667766542 34699999999999999999999999999999999996431 23579999999876
Q ss_pred Ch---hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc----ccccccCCCCCC
Q 000753 934 NQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL----NDSMVGLPGVSG 1006 (1302)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~~g~~~~~~ 1006 (1302)
.. ...++.++|++|++.+++ .|++||+.+....+.... ......+.++++++.++|.+. .+.. +..
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~ 142 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKLKQN-----ALA 142 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHhcCC-----ccc
Confidence 42 244667999999998887 699999988654331101 122334567889999999532 2332 457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEE
Q 000753 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1302)
Q Consensus 1007 LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~ 1086 (1302)
||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++...+|++++|++ |++
T Consensus 143 LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i 219 (246)
T PRK14269 143 LSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GEL 219 (246)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999864 899999999986 56778999999985 899
Q ss_pred EEecCC
Q 000753 1087 IYAGPL 1092 (1302)
Q Consensus 1087 ~~~g~~ 1092 (1302)
++.|+.
T Consensus 220 ~~~g~~ 225 (246)
T PRK14269 220 IEFGES 225 (246)
T ss_pred EEECCH
Confidence 988874
No 291
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-34 Score=313.88 Aligned_cols=183 Identities=45% Similarity=0.742 Sum_probs=156.7
Q ss_pred ccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC--CccceEEEEccCCCCCCC
Q 000753 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF--VPQRTCAYISQHDLHHGE 259 (1302)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~ 259 (1302)
.++.+|+|+|+++++|++++|+|||||||||||++|+|.+++....+|+|.++|+++... ..++.++|++|++.+++.
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 97 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPT 97 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceEEEEecccccCCC
Confidence 345799999999999999999999999999999999999983112399999999987643 234679999999999999
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
+||+||+.++++.. .++.+.
T Consensus 98 ~tv~~~l~~~~~~~---------------------------------------------------------~~~~~~--- 117 (202)
T cd03233 98 LTVRETLDFALRCK---------------------------------------------------------GNEFVR--- 117 (202)
T ss_pred CcHHHHHhhhhhhc---------------------------------------------------------cccchh---
Confidence 99999997742210 123333
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.||+..++.+++|++++|++
T Consensus 118 --~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~ 195 (202)
T cd03233 118 --GISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE 195 (202)
T ss_pred --hCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC
Confidence 499999999999999999999999999999999999999999999997654678888888887889999999999999
Q ss_pred CeEEEEc
Q 000753 420 GQIVYQG 426 (1302)
Q Consensus 420 G~iv~~G 426 (1302)
|++++.|
T Consensus 196 G~i~~~g 202 (202)
T cd03233 196 GRQIYYG 202 (202)
T ss_pred CEEEecC
Confidence 9998765
No 292
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-35 Score=326.11 Aligned_cols=209 Identities=25% Similarity=0.348 Sum_probs=172.8
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 356777776542 2469999999999999999999999999999999999765 3479999999875
Q ss_pred Ch---hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 000753 934 NQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLST 1009 (1302)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSg 1009 (1302)
.. ...++.++|++|++.+++ .|++||+.+....+ .. ....+.++++.++|. +..++. +..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~~----~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---GE----KNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---Cc----HHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 32 334567999999988876 69999997753321 11 123578899999996 455554 457999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000753 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1302)
Q Consensus 1010 GqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~ 1088 (1302)
|||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||++||+++ ++.+.||++++|.+ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 999999999999999999999999999999999999999999876 4899999999986 56678999999985 78888
Q ss_pred ecCC
Q 000753 1089 AGPL 1092 (1302)
Q Consensus 1089 ~g~~ 1092 (1302)
.|++
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 8775
No 293
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9e-35 Score=298.69 Aligned_cols=207 Identities=29% Similarity=0.443 Sum_probs=171.2
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCcc---ceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ---RTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~l 260 (1302)
+.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|++++||++++.+.+. +.-+..+|+..+-...
T Consensus 14 r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpF 90 (259)
T COG4559 14 RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPF 90 (259)
T ss_pred ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccce
Confidence 45899999999999999999999999999999999999997 99999999999887653 5668899998776668
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
||+|-+.++..-.+.+.. |. +...+++..|...++.+.+....-.
T Consensus 91 tv~eVV~mGr~p~~~g~~-----------------~~---------------e~~~i~~~ala~~d~~~la~R~y~~--- 135 (259)
T COG4559 91 TVQEVVQMGRIPHRSGRE-----------------PE---------------EDERIAAQALAATDLSGLAGRDYRT--- 135 (259)
T ss_pred EHHHHHHhcccccccCCC-----------------ch---------------hhHHHHHHHHHHcChhhhhccchhh---
Confidence 999999998654322211 10 1122356677888888877665544
Q ss_pred CCCChHHHHHHHHHHHHhc------CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeE
Q 000753 341 RGISGGQKKRVTTGEMLVG------TANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~------~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~i 414 (1302)
|||||||||.+||.|+. ++++||||||||+||...+..+++..|++++. |..++++ +|..+-.-.++|+|
T Consensus 136 --LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g~~V~~V-LHDLNLAA~YaDri 211 (259)
T COG4559 136 --LSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-GGAVLAV-LHDLNLAAQYADRI 211 (259)
T ss_pred --cCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-CCcEEEE-EccchHHHHhhhee
Confidence 99999999999999973 44599999999999999999999999999985 4555555 55566788999999
Q ss_pred EEecCCeEEEEcChhHHH
Q 000753 415 ILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 415 ilL~~G~iv~~G~~~~~~ 432 (1302)
++|.+||++..|++++++
T Consensus 212 vll~~Grv~a~g~p~~vl 229 (259)
T COG4559 212 VLLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeeCCeEeecCCHHHhc
Confidence 999999999999999876
No 294
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=331.50 Aligned_cols=217 Identities=24% Similarity=0.309 Sum_probs=178.6
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCce-eEEEEEEcCcc
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-IEGDIKISGYP 932 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~-~~G~i~i~g~~ 932 (1302)
.++++|+++.++. ..+.+|+|||++|++||++||+||||||||||+++|+|...+.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4778888775521 12359999999999999999999999999999999999754311 13899999987
Q ss_pred CCh---hhhcceeEEeccCCC-CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000753 933 KNQ---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1302)
Q Consensus 933 ~~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1302)
... ...++.+||++|++. .++..||.||+.|..... ....++..+.+.++++.++|.+..+.. ++.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSE-----PANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCC
Confidence 643 234567999999974 567899999998764322 233444556788999999998877766 45899
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEE
Q 000753 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1302)
Q Consensus 1009 gGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~ 1087 (1302)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ .+ ..||++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDID-EA-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 899999999986 34 67999999985 7999
Q ss_pred EecCC
Q 000753 1088 YAGPL 1092 (1302)
Q Consensus 1088 ~~g~~ 1092 (1302)
+.|++
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 98875
No 295
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.4e-34 Score=325.70 Aligned_cols=206 Identities=23% Similarity=0.316 Sum_probs=171.7
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC-----------CccceEEEEcc
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-----------VPQRTCAYISQ 252 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-----------~~~~~~~yv~Q 252 (1302)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q 92 (250)
T PRK11264 16 QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQ 92 (250)
T ss_pred eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEec
Confidence 35999999999999999999999999999999999999886 99999999887532 12457999999
Q ss_pred CCCCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccccc
Q 000753 253 HDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICAD 332 (1302)
Q Consensus 253 ~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 332 (1302)
++.+++.+||+||+.++....... ... +....++.+++.+||++..|
T Consensus 93 ~~~~~~~~tv~e~l~~~~~~~~~~-------------------~~~--------------~~~~~~~~~l~~~gl~~~~~ 139 (250)
T PRK11264 93 NFNLFPHRTVLENIIEGPVIVKGE-------------------PKE--------------EATARARELLAKVGLAGKET 139 (250)
T ss_pred CcccCCCCCHHHHHHHHHHHhcCC-------------------CHH--------------HHHHHHHHHHHHcCCcchhh
Confidence 999999999999998753210000 000 01122456788999988778
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|++ .++.+++|
T Consensus 140 ~~~~~-----LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~tvi~~tH~~-~~~~~~~d 212 (250)
T PRK11264 140 SYPRR-----LSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQE-KRTMVIVTHEM-SFARDVAD 212 (250)
T ss_pred CChhh-----CChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhc-CCEEEEEeCCH-HHHHHhcC
Confidence 87766 9999999999999999999999999999999999999999999998764 67887776665 57888999
Q ss_pred eEEEecCCeEEEEcChhHHH
Q 000753 413 DIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1302)
++++|++|++++.|+.+++.
T Consensus 213 ~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 213 RAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
No 296
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-35 Score=324.18 Aligned_cols=197 Identities=22% Similarity=0.295 Sum_probs=166.5
Q ss_pred ccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChh-hhcceeEEeccCCCCCCCCCHHHHHHH
Q 000753 885 SVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE-TFARVSGYCEQNDIHSPYVTVYESLLY 963 (1302)
Q Consensus 885 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~~ 963 (1302)
|||+++++||++||+||||||||||+++|+|... +.+|+|.++|.+.... ..++.++|++|++.+++.+|+.||+.+
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~ 94 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGL 94 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhc
Confidence 8999999999999999999999999999999765 3479999999875431 224579999999999999999999976
Q ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHH
Q 000753 964 SAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1043 (1302)
Q Consensus 964 ~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~ 1043 (1302)
..... ... .+..++.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 95 ~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~ 166 (232)
T PRK10771 95 GLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQ 166 (232)
T ss_pred ccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHH
Confidence 53211 111 1233556899999999988777764 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1044 IVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1044 ~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
.+.+.|+++++ .|+|||+++|++. ++.+.+|++++|.+ |++++.|+..
T Consensus 167 ~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~~ 215 (232)
T PRK10771 167 EMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPTD 215 (232)
T ss_pred HHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 99999999875 4899999999986 56778999999985 7999988753
No 297
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=7.2e-35 Score=342.82 Aligned_cols=194 Identities=26% Similarity=0.406 Sum_probs=168.1
Q ss_pred ccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh-------hhhcceeEEeccCCCCCCCCCH
Q 000753 885 SVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-------ETFARVSGYCEQNDIHSPYVTV 957 (1302)
Q Consensus 885 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 957 (1302)
|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 9999999999999999999999999999999765 347999999987532 1345679999999999999999
Q ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 000753 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1302)
Q Consensus 958 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgL 1037 (1302)
+||+.|+.... ...+..+.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998865321 12233456889999999988877764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1038 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
|+.++..+++.|++++++ |+|||++||+++ ++...+|++++|++ |+++..|++
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999765 899999999986 57778999999985 789998875
No 298
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=329.45 Aligned_cols=216 Identities=25% Similarity=0.368 Sum_probs=178.1
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCC-CCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDL-HHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 259 (1302)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++. .++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 34899999999999999999999999999999999999987 9999999998765332 457999999973 6667
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
.||.||+.++.+..+.. .. +....++++++.+||++..++.+++
T Consensus 97 ~tv~enl~~~~~~~~~~--------------------~~--------------~~~~~~~~~l~~~gL~~~~~~~~~~-- 140 (279)
T PRK13635 97 ATVQDDVAFGLENIGVP--------------------RE--------------EMVERVDQALRQVGMEDFLNREPHR-- 140 (279)
T ss_pred ccHHHHHhhhHhhCCCC--------------------HH--------------HHHHHHHHHHHHcCChhhhhCCccc--
Confidence 89999998864322100 00 0112356788999999888888876
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++...+.|++++.|++. ++. .+|+|++|++
T Consensus 141 ---LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~~-~~d~i~~l~~ 215 (279)
T PRK13635 141 ---LSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EAA-QADRVIVMNK 215 (279)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HHH-cCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999998755788888888765 454 5999999999
Q ss_pred CeEEEEcChhHHHH---HHHhcCCCCC
Q 000753 420 GQIVYQGPRDNVLE---FFEHMGFKCP 443 (1302)
Q Consensus 420 G~iv~~G~~~~~~~---~f~~lG~~~p 443 (1302)
|++++.|+.+++.. .+...|..+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 216 GEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 99999999988753 3334454443
No 299
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=7.7e-35 Score=320.12 Aligned_cols=195 Identities=25% Similarity=0.363 Sum_probs=164.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 46999999999999999999999999999999999999887 999999999875432 245799999999999
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
+.+||+||+.+.....+.. . . +....++.+++.+||++..++.+++
T Consensus 91 ~~~t~~~~l~~~~~~~~~~--~--------~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~ 136 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP--P--------R------------------------EIRKRVPAALELVGLSHKHRALPAE 136 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC--H--------H------------------------HHHHHHHHHHHHcCCHHHhhCChhh
Confidence 9999999998864322110 0 0 0011345688899999888888766
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|++ .++.+++|++++|
T Consensus 137 -----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~tiiivtH~~-~~~~~~~d~i~~l 209 (214)
T cd03292 137 -----LSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKA-GTTVVVATHAK-ELVDTTRHRVIAL 209 (214)
T ss_pred -----cCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHc-CCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998654 77888887765 5777889999999
Q ss_pred cCCeE
Q 000753 418 SEGQI 422 (1302)
Q Consensus 418 ~~G~i 422 (1302)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 300
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=333.37 Aligned_cols=205 Identities=23% Similarity=0.350 Sum_probs=169.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCC-----------------------
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNE----------------------- 240 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~----------------------- 240 (1302)
..+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+...
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35899999999999999999999999999999999999987 8999999875421
Q ss_pred ----CCccceEEEEccCC-CCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhh
Q 000753 241 ----FVPQRTCAYISQHD-LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETS 315 (1302)
Q Consensus 241 ----~~~~~~~~yv~Q~d-~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~ 315 (1302)
...++.+|||+|++ ..+...||+|||.|+....+.. .. +..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~--------------------~~--------------~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVS--------------------KE--------------EAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCC--------------------HH--------------HHH
Confidence 01246799999985 3444579999999864432210 00 011
Q ss_pred hHHHHHHHHcCCc-ccccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCc
Q 000753 316 LVTDYVLKILGLD-ICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDV 394 (1302)
Q Consensus 316 ~~~~~~l~~lgL~-~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~ 394 (1302)
..++.+++.+||+ +..++.+.+ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .+.
T Consensus 143 ~~~~~~l~~~gL~~~~~~~~~~~-----LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~ 216 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQRSPFE-----LSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-QGK 216 (305)
T ss_pred HHHHHHHHHcCCChhhhhCChhh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCC
Confidence 2356788999996 667877766 999999999999999999999999999999999999999999999875 478
Q ss_pred eEEEEEecCchhHHhhcCeEEEecCCeEEEEcChhHHH
Q 000753 395 TMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 395 t~ii~~~q~~~e~~~~~D~iilL~~G~iv~~G~~~~~~ 432 (1302)
|+|++.|+. .++.+++|+|++|++|+++++|+++++.
T Consensus 217 tiiivtHd~-~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 217 TIILVTHDL-DNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred EEEEEeeCH-HHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 887777664 5788999999999999999999998874
No 301
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=336.53 Aligned_cols=222 Identities=18% Similarity=0.220 Sum_probs=176.3
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC--ceeEEEEEEcCcc
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYIEGDIKISGYP 932 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g~~~G~i~i~g~~ 932 (1302)
+.++|++..++.. .+...+|+||||+|++||++||+|+||||||||+++|+|.... .+..|+|.++|.+
T Consensus 4 L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 4 LDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred EEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEE
Confidence 6778887665321 1235699999999999999999999999999999999997542 2357999999987
Q ss_pred CCh---hhh----cceeEEeccCCC--CCCCCCHHHHHHHHHHhhCCCC---CcHHHHHHHHHHHHHHcCCccc---ccc
Q 000753 933 KNQ---ETF----ARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSD---VDTKKRKMFVDEVMELVELKSL---NDS 997 (1302)
Q Consensus 933 ~~~---~~~----~~~~gyv~Q~~~--~~~~lTv~E~l~~~~~lr~~~~---~~~~~~~~~v~~~l~~l~L~~~---~~~ 997 (1302)
+.. ... ++.++||+|++. +.|.+||.+++.+......... ....+..+.+.++++.++|.+. .+.
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~ 154 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRS 154 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhC
Confidence 532 111 246999999985 6788999999976422111000 1112334568899999999753 234
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCe
Q 000753 998 MVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1076 (1302)
Q Consensus 998 ~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~ 1076 (1302)
. +..||||||||++||+||+.+|+||||||||+|||+.++..++++|+++.++ |.|||++|||++ .+.+.+|+
T Consensus 155 ~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dr 228 (330)
T PRK15093 155 F-----PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADK 228 (330)
T ss_pred C-----chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 3 4589999999999999999999999999999999999999999999999764 899999999986 56678999
Q ss_pred EEEEecCcEEEEecCC
Q 000753 1077 LLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1077 i~~l~~gG~~~~~g~~ 1092 (1302)
+++|.+ |++++.|+.
T Consensus 229 i~vm~~-G~ive~g~~ 243 (330)
T PRK15093 229 INVLYC-GQTVETAPS 243 (330)
T ss_pred EEEEEC-CEEEEECCH
Confidence 999985 899999975
No 302
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.1e-34 Score=323.79 Aligned_cols=202 Identities=29% Similarity=0.423 Sum_probs=172.1
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChh-hhcceeEEeccCCCCCCCCCHH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE-TFARVSGYCEQNDIHSPYVTVY 958 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~ 958 (1302)
+.+|+|+|+++.+||+++|+||||||||||+++|+|..+ +..|+|.++|.++... ..++.++|++|++.+++.+|+.
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 469999999999999999999999999999999999765 3479999999876432 2346799999999999999999
Q ss_pred HHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCC
Q 000753 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1302)
Q Consensus 959 E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD 1038 (1302)
||+.+....+. .......+.++++++.+++.+..++.. ..||+||+||++|||+|+.+|++++|||||+|||
T Consensus 91 enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~~LD 162 (237)
T TIGR00968 91 DNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQRVALARALAVEPQVLLLDEPFGALD 162 (237)
T ss_pred HHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 99987654321 222333456789999999987777653 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1039 ARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
+.++..+.+.|++++++ |+|||++||+++ ++.+.||++++|.+ |++++.|+..
T Consensus 163 ~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 216 (237)
T TIGR00968 163 AKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSPD 216 (237)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCHH
Confidence 99999999999998765 899999999985 56778999999985 7899888753
No 303
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.1e-35 Score=339.44 Aligned_cols=212 Identities=25% Similarity=0.405 Sum_probs=176.0
Q ss_pred CCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcC
Q 000753 851 QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISG 930 (1302)
Q Consensus 851 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g 930 (1302)
.+..++|+||++++. +++++|++|||+|++||.+||+|+|||||||++++|.+..+ .+|+|.|||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 445699999998774 23459999999999999999999999999999999999665 379999999
Q ss_pred ccCC---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccc-------ccccc
Q 000753 931 YPKN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-------DSMVG 1000 (1302)
Q Consensus 931 ~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g 1000 (1302)
.++. .+.+|+.|||||||..++. -||.+|+.|+. .+.+.+ .|-++.+..++.+.. ++.+|
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~e----eV~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDE----EVVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHH----HHHHHHHHcCcHHHHHhccccchhhHh
Confidence 9864 4678899999999988875 59999999863 233322 355566666665432 33455
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEE
Q 000753 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1302)
Q Consensus 1001 ~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l 1080 (1302)
..| ..|||||||||+||||++++|+|+++|||||+||..+...+++.+++.. .|+|+|++.|+. +....||+|++|
T Consensus 483 erG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~-~~rTvI~IvH~l--~ll~~~DkI~~l 558 (591)
T KOG0057|consen 483 ERG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVM-SGRTVIMIVHRL--DLLKDFDKIIVL 558 (591)
T ss_pred hcc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhc-CCCeEEEEEecc--hhHhcCCEEEEE
Confidence 543 4699999999999999999999999999999999999999999999943 689999999996 578899999999
Q ss_pred ecCcEEEEecCC
Q 000753 1081 KRGGRVIYAGPL 1092 (1302)
Q Consensus 1081 ~~gG~~~~~g~~ 1092 (1302)
++ |++...|+.
T Consensus 559 ~n-G~v~e~gth 569 (591)
T KOG0057|consen 559 DN-GTVKEYGTH 569 (591)
T ss_pred EC-CeeEEeccH
Confidence 96 789888885
No 304
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=331.42 Aligned_cols=207 Identities=29% Similarity=0.365 Sum_probs=172.5
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCC--C---CccceEEEEccCCC-CC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNE--F---VPQRTCAYISQHDL-HH 257 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~ 257 (1302)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 95 (283)
T PRK13636 19 THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQL 95 (283)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhh
Confidence 35999999999999999999999999999999999999887 9999999998741 1 12467999999973 33
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
...||+||+.+.....+.. .. +....++.+++.+||.+..|+.+++
T Consensus 96 ~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~~ 141 (283)
T PRK13636 96 FSASVYQDVSFGAVNLKLP----------ED------------------------EVRKRVDNALKRTGIEHLKDKPTHC 141 (283)
T ss_pred ccccHHHHHHhHHHHcCCC----------HH------------------------HHHHHHHHHHHHCCChhhhhCCccc
Confidence 4579999998754321110 00 0012356788999999888888876
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|++++.|++ .++.++||++++|
T Consensus 142 -----LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~-~~~~~~~dri~~l 215 (283)
T PRK13636 142 -----LSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDI-DIVPLYCDNVFVM 215 (283)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999999875578888887665 4677899999999
Q ss_pred cCCeEEEEcChhHHHH
Q 000753 418 SEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 418 ~~G~iv~~G~~~~~~~ 433 (1302)
++|++++.|+.+++..
T Consensus 216 ~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 216 KEGRVILQGNPKEVFA 231 (283)
T ss_pred ECCEEEEeCCHHHHhc
Confidence 9999999999988753
No 305
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=340.24 Aligned_cols=195 Identities=25% Similarity=0.413 Sum_probs=171.0
Q ss_pred ceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC-------CccceEEEEccCCCCCCCCC
Q 000753 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------VPQRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 261 (1302)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++||+|++.+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999887 99999999886431 12467999999999999999
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
|+||+.|+.+. . ....++.+++.+||++..++.+++
T Consensus 93 v~enl~~~~~~-----------~-----------------------------~~~~~~~~l~~~gl~~~~~~~~~~---- 128 (352)
T PRK11144 93 VRGNLRYGMAK-----------S-----------------------------MVAQFDKIVALLGIEPLLDRYPGS---- 128 (352)
T ss_pred HHHHHHhhhhh-----------h-----------------------------hHHHHHHHHHHcCCchhhhCCccc----
Confidence 99999875210 0 011245688999999888888876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .++..++|+|++|++|+
T Consensus 129 -LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~-~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 129 -LSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSL-DEILRLADRVVVLEQGK 206 (352)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCH-HHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999999999999999999876677888887765 58889999999999999
Q ss_pred EEEEcChhHHH
Q 000753 422 IVYQGPRDNVL 432 (1302)
Q Consensus 422 iv~~G~~~~~~ 432 (1302)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999998874
No 306
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.1e-34 Score=329.25 Aligned_cols=204 Identities=20% Similarity=0.213 Sum_probs=151.0
Q ss_pred CCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcC
Q 000753 851 QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISG 930 (1302)
Q Consensus 851 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g 930 (1302)
.|..+.+.+|++.++. +..+++.+++..++.-..++++|+||+||||+++++.|..+ +..|.+.+.+
T Consensus 359 ~~p~l~i~~V~f~y~p-----------~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~ 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTP-----------SEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP 425 (582)
T ss_pred CCCeeEEEeeeccCCC-----------cchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc
Confidence 4556777777755431 12268999999999999999999999999999999998554 2356555543
Q ss_pred ccCChhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCH
Q 000753 931 YPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLST 1009 (1302)
Q Consensus 931 ~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSg 1009 (1302)
+.+++|-.|...-+-.+.|.+- .+-...+. ... ++.+.+-+..+||.. ++... +.+|||
T Consensus 426 --------r~ri~~f~Qhhvd~l~~~v~~v-d~~~~~~p--G~~----~ee~r~hl~~~Gl~g~la~~s-----i~~LSG 485 (582)
T KOG0062|consen 426 --------RLRIKYFAQHHVDFLDKNVNAV-DFMEKSFP--GKT----EEEIRRHLGSFGLSGELALQS-----IASLSG 485 (582)
T ss_pred --------cceecchhHhhhhHHHHHhHHH-HHHHHhCC--CCC----HHHHHHHHHhcCCCchhhhcc-----ccccCC
Confidence 4568999997665544444332 22222221 222 233677889999964 33322 457999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000753 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1302)
Q Consensus 1010 GqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~ 1089 (1302)
|||-||++|.....+|.+|+|||||+.||-.+-..+-+.|++. +..||++||+.+. +-..|+++.+.++|...-..
T Consensus 486 GQKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~f-i~~~c~E~Wvve~g~vt~ie 561 (582)
T KOG0062|consen 486 GQKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEEF-ISSLCKELWVVEDGKVTPIE 561 (582)
T ss_pred cchhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHHH-HhhcCceeEEEcCCcEEeee
Confidence 9999999999999999999999999999999999999999876 5689999999653 66689999999875444445
Q ss_pred cC
Q 000753 1090 GP 1091 (1302)
Q Consensus 1090 g~ 1091 (1302)
|.
T Consensus 562 g~ 563 (582)
T KOG0062|consen 562 GG 563 (582)
T ss_pred cc
Confidence 54
No 307
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=323.33 Aligned_cols=206 Identities=21% Similarity=0.353 Sum_probs=173.0
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc----cceEEEEccCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 46999999999999999999999999999999999999887 9999999988754332 3579999999999999
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
+||+||+.+..+...... . . +....++.+++.+||++..++.+++
T Consensus 93 ~tv~enl~~~~~~~~~~~---------~----------~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 137 (241)
T PRK10895 93 LSVYDNLMAVLQIRDDLS---------A----------E--------------QREDRANELMEEFHIEHLRDSMGQS-- 137 (241)
T ss_pred CcHHHHHhhhhhcccccC---------H----------H--------------HHHHHHHHHHHHcCCHHHhhcchhh--
Confidence 999999987533211000 0 0 0112346688899998777777765
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.++++++ .+.|+|++.|++ .++.+++|++++|++
T Consensus 138 ---LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiii~sH~~-~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 138 ---LSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGLGVLITDHNV-RETLAVCERAYIVSQ 212 (241)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEEcCH-HHHHHhcCEEEEEeC
Confidence 999999999999999999999999999999999999999999998875 477888887765 478899999999999
Q ss_pred CeEEEEcChhHHH
Q 000753 420 GQIVYQGPRDNVL 432 (1302)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1302)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988764
No 308
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-35 Score=341.54 Aligned_cols=191 Identities=26% Similarity=0.384 Sum_probs=166.7
Q ss_pred ccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh-------hhhcceeEEeccCCCCCCCCCH
Q 000753 885 SVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-------ETFARVSGYCEQNDIHSPYVTV 957 (1302)
Q Consensus 885 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 957 (1302)
|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|++.++|.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999765 347999999987532 2345789999999999999999
Q ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 000753 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1302)
Q Consensus 958 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgL 1037 (1302)
+||+.|... ....+.++++++.++|.+..++. +..||||||||++|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRY-----PGSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987532 11234578999999998877776 4579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1038 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
|+.++..+++.|++++++ |+|||++||+++ ++...+|++++|++ |+++..|++.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 214 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPLE 214 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCHH
Confidence 999999999999999765 899999999986 67788999999985 7999988853
No 309
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1e-34 Score=319.06 Aligned_cols=194 Identities=28% Similarity=0.384 Sum_probs=163.9
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1302)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 45999999999999999999999999999999999999886 999999999876432 245799999999999
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
+.+||+||+.++....+.. ++ .....++.+++.+||++..++.+.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~---------------------~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~ 137 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKK---------------------ER-------------EIQRRVGAALRQVGLEHKADAFPEQ 137 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC---------------------HH-------------HHHHHHHHHHHHcCChhhhhCChhh
Confidence 9999999998864322100 00 0012346688999998877887766
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .++|++++.|++ .++.+++|++++|
T Consensus 138 -----LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH~~-~~~~~~~d~i~~l 210 (214)
T TIGR02673 138 -----LSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-RGTTVIVATHDL-SLVDRVAHRVIIL 210 (214)
T ss_pred -----CCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cCCEEEEEeCCH-HHHHHhcCEEEEe
Confidence 999999999999999999999999999999999999999999999865 377888887765 5788899999999
Q ss_pred cCCe
Q 000753 418 SEGQ 421 (1302)
Q Consensus 418 ~~G~ 421 (1302)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 310
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.3e-33 Score=363.33 Aligned_cols=210 Identities=28% Similarity=0.390 Sum_probs=175.4
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1302)
..++++|++|.++. ..+.+|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ--PWSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEe
Confidence 46899999998742 12469999999999999999999999999999999999766 357999999988
Q ss_pred CC---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000753 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-------DSMVGLP 1002 (1302)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 1002 (1302)
+. ...+++.+|||+|++.+++ .|++||+.++. .+.+ ++.++++++..++.+.. |+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~-----~~~~----~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD-----PTIP----DADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC-----CCCC----HHHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 64 3567889999999999885 59999997641 1222 23367778888776543 4445543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|++ .++|+|++||+++ ....+|++++|++
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 457999999999999999999999999999999999999999999986 4899999999975 5677999999985
Q ss_pred CcEEEEecCC
Q 000753 1083 GGRVIYAGPL 1092 (1302)
Q Consensus 1083 gG~~~~~g~~ 1092 (1302)
|++++.|+.
T Consensus 687 -G~i~~~G~~ 695 (710)
T TIGR03796 687 -GKVVQRGTH 695 (710)
T ss_pred -CEEEEecCH
Confidence 899999985
No 311
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=5.2e-34 Score=331.53 Aligned_cols=214 Identities=21% Similarity=0.247 Sum_probs=172.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-------cceEEEEccCC--
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHD-- 254 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d-- 254 (1302)
..+|+|||++|++||+++|+|+||||||||+++|+|.++++...+|+|.++|.++..... ++.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 569999999999999999999999999999999999998742348999999998865432 14799999998
Q ss_pred CCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccccccc
Q 000753 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTM 334 (1302)
Q Consensus 255 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 334 (1302)
.++|.+||.+++.+........ ... +....+..+++.+||++..++
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~~---------~~~------------------------~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKGM---------SKA------------------------EAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcCC---------CHH------------------------HHHHHHHHHHHHcCCCChHHH-
Confidence 6889999999997653321100 000 011234567889999764322
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeE
Q 000753 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1302)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~i 414 (1302)
+ +...+.|||||||||+||+||+.+|+++++||||+|||+.++.++.+.|+++.+..+.|+|++.|+. ..+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl-~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDL-GVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCH-HHHHHhCCEE
Confidence 1 1234559999999999999999999999999999999999999999999999876677887777665 4777899999
Q ss_pred EEecCCeEEEEcChhHHHH
Q 000753 415 ILLSEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 415 ilL~~G~iv~~G~~~~~~~ 433 (1302)
++|++|++++.|+.+++.+
T Consensus 233 ~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999988753
No 312
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.8e-34 Score=320.72 Aligned_cols=202 Identities=26% Similarity=0.364 Sum_probs=168.9
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc----cceEEEEccCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 46999999999999999999999999999999999999887 9999999988754322 3579999999999999
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcC-CcccccccccCc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILG-LDICADTMVGDE 338 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 338 (1302)
+||+||+.++....+.. . ....+.+++.++ +++..++.+++
T Consensus 90 ~tv~~~l~~~~~~~~~~----------~---------------------------~~~~~~~l~~~~~l~~~~~~~~~~- 131 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR----------S---------------------------RKIPDEIYELFPVLKEMLGRRGGD- 131 (230)
T ss_pred CcHHHHHHHHHHhcCcc----------h---------------------------HHHHHHHHHHHHhHHHHhhCChhh-
Confidence 99999998764321100 0 001234556665 55556777765
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEec
Q 000753 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1302)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~ 418 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++..+.|+|++.|++ .++.+++|+|++|+
T Consensus 132 ----LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~~~~d~v~~l~ 206 (230)
T TIGR03410 132 ----LSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYL-DFARELADRYYVME 206 (230)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCH-HHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999998764467888887765 47888999999999
Q ss_pred CCeEEEEcChhHH
Q 000753 419 EGQIVYQGPRDNV 431 (1302)
Q Consensus 419 ~G~iv~~G~~~~~ 431 (1302)
+|++++.|+.+++
T Consensus 207 ~g~i~~~~~~~~~ 219 (230)
T TIGR03410 207 RGRVVASGAGDEL 219 (230)
T ss_pred CCEEEEECCHHHc
Confidence 9999999998876
No 313
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=324.46 Aligned_cols=194 Identities=22% Similarity=0.296 Sum_probs=167.2
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCCCHHH
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRE 264 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVrE 264 (1302)
++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 5899999999999999999999999999999999999887 9999999977543 2467999999999999899999
Q ss_pred HHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCC
Q 000753 265 TLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGIS 344 (1302)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLS 344 (1302)
|+.+... . . ....++.+++.+||++..+..+++ ||
T Consensus 101 nl~~~~~--~---~-----------------------------------~~~~~~~~l~~~gl~~~~~~~~~~-----LS 135 (257)
T PRK11247 101 NVGLGLK--G---Q-----------------------------------WRDAALQALAAVGLADRANEWPAA-----LS 135 (257)
T ss_pred HHHhccc--c---h-----------------------------------HHHHHHHHHHHcCChhHhcCChhh-----CC
Confidence 9987421 0 0 001235578899998877777766 99
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEEE
Q 000753 345 GGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVY 424 (1302)
Q Consensus 345 GGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv~ 424 (1302)
|||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++.|++. ++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEECCEEEe
Confidence 999999999999999999999999999999999999999999987655788888877654 6778999999999999999
Q ss_pred EcChh
Q 000753 425 QGPRD 429 (1302)
Q Consensus 425 ~G~~~ 429 (1302)
+|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88754
No 314
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.5e-34 Score=319.26 Aligned_cols=201 Identities=27% Similarity=0.351 Sum_probs=164.9
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCC--CC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHD--LH 256 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 256 (1302)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999999887 999999999876532 246799999998 46
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc-ccccccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTMV 335 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 335 (1302)
++.+||+||+.+.....+.... + +. .....+.+++.+||. +..+..+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~--------------------~-~~-----------~~~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSK--------------------K-EA-----------RKEAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcH--------------------H-HH-----------HHHHHHHHHHHCCCChhHhhCCc
Confidence 6789999999875432211000 0 00 001123577889995 5667777
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEE
Q 000753 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1302)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ii 415 (1302)
++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|+
T Consensus 144 ~~-----LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~~~~d~i~ 217 (228)
T cd03257 144 HE-----LSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDL-GVVAKIADRVA 217 (228)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhcCeEE
Confidence 66 9999999999999999999999999999999999999999999999865477888887776 47777999999
Q ss_pred EecCCeEEEEc
Q 000753 416 LLSEGQIVYQG 426 (1302)
Q Consensus 416 lL~~G~iv~~G 426 (1302)
+|++|+++.+|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 315
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.4e-34 Score=321.36 Aligned_cols=201 Identities=24% Similarity=0.328 Sum_probs=166.1
Q ss_pred eecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc--eeEEEEEEcCccCChhhh-cceeEEeccCCC--CCCCCC
Q 000753 882 LLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YIEGDIKISGYPKNQETF-ARVSGYCEQNDI--HSPYVT 956 (1302)
Q Consensus 882 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g--~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~~~--~~~~lT 956 (1302)
+|+|||++|++|++++|+||||||||||+++|+|..++. +.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 578999999999999999999999999999999976520 147999999987654333 357999999984 567799
Q ss_pred HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc---ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCC
Q 000753 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK---SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1302)
Q Consensus 957 v~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~---~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEP 1033 (1302)
+.|++.+...... . ......+.++++++.+++. +..+.. +..||||||||++|||+|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG--K-LSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC--c-cHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977543221 1 1233345688999999997 344444 457999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1034 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999998764 899999999986 56678999999985 889888874
No 316
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2e-34 Score=318.38 Aligned_cols=196 Identities=21% Similarity=0.347 Sum_probs=164.2
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-------cceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 256 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999999887 9999999998755321 2569999999999
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccccccccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 336 (1302)
++.+||+||+.+........ .. +....+..+++.+||++..++.++
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~ 140 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKS----------VK------------------------EAKERAYEMLEKVGLEHRINHRPS 140 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhCChh
Confidence 98999999998754321100 00 001124568889999887788776
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEE
Q 000753 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1302)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iil 416 (1302)
. |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++ +.+|++++
T Consensus 141 ~-----LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~ 213 (221)
T TIGR02211 141 E-----LSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLE 213 (221)
T ss_pred h-----CCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEE
Confidence 6 99999999999999999999999999999999999999999999997655788888888764 45 45799999
Q ss_pred ecCCeEE
Q 000753 417 LSEGQIV 423 (1302)
Q Consensus 417 L~~G~iv 423 (1302)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 317
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-34 Score=317.40 Aligned_cols=197 Identities=32% Similarity=0.462 Sum_probs=165.6
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC--ccceEEEEccCCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1302)
.++|+|+|+++++| +++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFT 88 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCC
Confidence 36999999999999 99999999999999999999999887 999999998775432 2467999999999999999
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
|+||+.+.....+.. ..+ ....++.+++.+||++..++.+++
T Consensus 89 v~~~l~~~~~~~~~~--------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~---- 130 (211)
T cd03264 89 VREFLDYIAWLKGIP--------------------SKE--------------VKARVDEVLELVNLGDRAKKKIGS---- 130 (211)
T ss_pred HHHHHHHHHHHhCCC--------------------HHH--------------HHHHHHHHHHHCCCHHHHhCchhh----
Confidence 999998754322100 000 011346688999999888888876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|++++|++|+
T Consensus 131 -LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~vsH~~-~~~~~~~d~i~~l~~g~ 206 (211)
T cd03264 131 -LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--DRIVILSTHIV-EDVESLCNQVAVLNKGK 206 (211)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEcCCH-HHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999875 46777776654 46778999999999999
Q ss_pred EEEEc
Q 000753 422 IVYQG 426 (1302)
Q Consensus 422 iv~~G 426 (1302)
+++.|
T Consensus 207 i~~~g 211 (211)
T cd03264 207 LVFEG 211 (211)
T ss_pred EEecC
Confidence 98765
No 318
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-34 Score=321.66 Aligned_cols=199 Identities=28% Similarity=0.402 Sum_probs=170.3
Q ss_pred eecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh-hhhcceeEEeccCCCCCCCCCHHHH
Q 000753 882 LLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVYES 960 (1302)
Q Consensus 882 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~ 960 (1302)
+|+|+|++|+|||+++|+|+||||||||+++|+|... +..|+|.++|.+... ...++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 8999999999999999999999999999999999765 357999999987643 1234679999999999999999999
Q ss_pred HHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHH
Q 000753 961 LLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1040 (1302)
Q Consensus 961 l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~ 1040 (1302)
+.+..... .....+..+.+.++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1223344456788999999988777764 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1041 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1041 ~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
++..+.+.|++++.+ |+|||++||++. ++.+.+|++++|++ |++++.|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998754 999999999985 46678999999985 789888874
No 319
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=323.74 Aligned_cols=215 Identities=26% Similarity=0.315 Sum_probs=173.2
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCC--C-ceeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i~g 930 (1302)
.+.++|+++.++ ++.+|+|+|++|++||++||+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 367888876542 2469999999999999999999999999999999999632 2 11379999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1302)
.+... ..+++.++|++|++.+++ .||+||+.+....+. ....+...+.+.++++.+++.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--- 145 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC---
Confidence 87531 234567999999998887 899999987643321 1112233456788899998743 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14239 146 --ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 699999999976 5778899999998
Q ss_pred cCcEEEEecCC
Q 000753 1082 RGGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1302)
+ |++++.|+.
T Consensus 222 ~-G~i~~~g~~ 231 (252)
T PRK14239 222 D-GDLIEYNDT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 789988875
No 320
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.1e-32 Score=354.32 Aligned_cols=211 Identities=23% Similarity=0.374 Sum_probs=175.7
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1302)
..++++|++|.++. ++.+|+|+|++|+|||.+||+|+||||||||+++|+|... +.+|+|.+||.+
T Consensus 472 ~~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~ 537 (708)
T TIGR01193 472 GDIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFS 537 (708)
T ss_pred CcEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEE
Confidence 46899999987741 2359999999999999999999999999999999999766 357999999987
Q ss_pred C---ChhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000753 933 K---NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1302)
Q Consensus 933 ~---~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1302)
+ +...+++.+|||+|++.+++. |++||+.++.. .+.+. +.++++++..++.+. .|+.+|..
T Consensus 538 i~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~~----~~~~~----~~i~~a~~~a~l~~~i~~lp~gldt~i~e~ 608 (708)
T TIGR01193 538 LKDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGAK----ENVSQ----DEIWAACEIAEIKDDIENMPLGYQTELSEE 608 (708)
T ss_pred HHHcCHHHHHHheEEEecCceehhH-HHHHHHhccCC----CCCCH----HHHHHHHHHhCCHHHHHhcccccCcEecCC
Confidence 5 345678899999999998865 99999987521 12222 336677777776543 24555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ +|+|+|++||+++ ..+.+|++++|++
T Consensus 609 -G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~ 683 (708)
T TIGR01193 609 -GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH 683 (708)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC
Confidence 4579999999999999999999999999999999999999999999985 4899999999975 5678999999985
Q ss_pred CcEEEEecCC
Q 000753 1083 GGRVIYAGPL 1092 (1302)
Q Consensus 1083 gG~~~~~g~~ 1092 (1302)
|++++.|+.
T Consensus 684 -G~i~~~G~~ 692 (708)
T TIGR01193 684 -GKIIEQGSH 692 (708)
T ss_pred -CEEEEECCH
Confidence 899999984
No 321
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-34 Score=324.62 Aligned_cols=215 Identities=21% Similarity=0.303 Sum_probs=174.4
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCC--Cc-eeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~g-~~~G~i~i~g 930 (1302)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 468888876542 2469999999999999999999999999999999999653 11 1479999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL----NDSMVGL 1001 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~~g~ 1001 (1302)
.+... ...++.+||++|++.+++. |++||+.+....+. ....++..+.++++++.+++.+. .+..
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~--- 152 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHTQ--- 152 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhCC---
Confidence 87531 2345679999999988875 99999987643321 11223344567888999988542 2332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+.+||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 153 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 228 (259)
T PRK14274 153 --ALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFY 228 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999986 5677899999998
Q ss_pred cCcEEEEecCC
Q 000753 1082 RGGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1302)
+ |+++..|++
T Consensus 229 ~-G~i~~~g~~ 238 (259)
T PRK14274 229 M-GELVECNDT 238 (259)
T ss_pred C-CEEEEECCH
Confidence 5 899998875
No 322
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-34 Score=323.14 Aligned_cols=216 Identities=23% Similarity=0.276 Sum_probs=174.5
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc---eeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1302)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 457778776542 246999999999999999999999999999999999964321 2479999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1302)
.++.. ...++.+||++|++.+++ .|++||+.|....... .......+.++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87632 234567999999998887 8999999876543211 122334456788999998743 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||+|||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 457999999999999999999999999999999999999999999999876 699999999986 5677899999998
Q ss_pred cCcEEEEecCCC
Q 000753 1082 RGGRVIYAGPLG 1093 (1302)
Q Consensus 1082 ~gG~~~~~g~~~ 1093 (1302)
+ |++++.|+..
T Consensus 221 ~-G~i~~~~~~~ 231 (251)
T PRK14270 221 M-GDLIEFNKTE 231 (251)
T ss_pred C-CeEEEeCCHH
Confidence 5 7899888753
No 323
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-34 Score=323.14 Aligned_cols=201 Identities=24% Similarity=0.347 Sum_probs=168.9
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCCCHH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVr 263 (1302)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..+.++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHH
Confidence 45999999999999999999999999999999999999887 9999999998754 234689999999999999999
Q ss_pred HHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCC
Q 000753 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1302)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 343 (1302)
||+.+.....+.. . . +....++.+++.+||++..++.+++ |
T Consensus 89 e~l~~~~~~~~~~----------~----------~--------------~~~~~~~~~l~~~gl~~~~~~~~~~-----L 129 (255)
T PRK11248 89 DNVAFGLQLAGVE----------K----------M--------------QRLEIAHQMLKKVGLEGAEKRYIWQ-----L 129 (255)
T ss_pred HHHHhHHHHcCCC----------H----------H--------------HHHHHHHHHHHHcCChhHhhCChhh-----C
Confidence 9998753321100 0 0 0011346688999998877877766 9
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEec--CCe
Q 000753 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS--EGQ 421 (1302)
Q Consensus 344 SGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~--~G~ 421 (1302)
||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~-~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDI-EEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEeCCCcE
Confidence 999999999999999999999999999999999999999999998654577888877665 57888999999998 599
Q ss_pred EEEEcChh
Q 000753 422 IVYQGPRD 429 (1302)
Q Consensus 422 iv~~G~~~ 429 (1302)
++..++.+
T Consensus 209 i~~~~~~~ 216 (255)
T PRK11248 209 VVERLPLN 216 (255)
T ss_pred EEEEecCC
Confidence 99988753
No 324
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-34 Score=331.53 Aligned_cols=211 Identities=20% Similarity=0.256 Sum_probs=171.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC-CccceEEECCcccCCCCc-------cceEEEEccCC-
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL-RASGKITYCGHELNEFVP-------QRTCAYISQHD- 254 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~-~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d- 254 (1302)
.++|+|||++|++||+++|+|+||||||||+++|+|.+++.. ..+|+|.++|+++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 569999999999999999999999999999999999987421 248999999998765432 13699999998
Q ss_pred -CCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc---c
Q 000753 255 -LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI---C 330 (1302)
Q Consensus 255 -~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~ 330 (1302)
.+.|.+||.+++....+..... .+ .+....++.+++.+||++ .
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~~---------~~------------------------~~~~~~~~~~L~~~gL~~~~~~ 146 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGG---------NK------------------------KTRRQRAIDLLNQVGIPDPASR 146 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcCC---------CH------------------------HHHHHHHHHHHHHCCCCChHHH
Confidence 4788999999986643321000 00 011223567899999975 3
Q ss_pred ccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhh
Q 000753 331 ADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDL 410 (1302)
Q Consensus 331 ~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~ 410 (1302)
.+..+++ |||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+..+.|+|++.|+. ..+.++
T Consensus 147 l~~~p~~-----LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl-~~~~~~ 220 (326)
T PRK11022 147 LDVYPHQ-----LSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDL-ALVAEA 220 (326)
T ss_pred HhCCchh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHh
Confidence 4555554 9999999999999999999999999999999999999999999999876678888777665 467789
Q ss_pred cCeEEEecCCeEEEEcChhHHHH
Q 000753 411 FDDIILLSEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 411 ~D~iilL~~G~iv~~G~~~~~~~ 433 (1302)
+|+|++|++|++++.|+.+++.+
T Consensus 221 adri~vm~~G~ive~g~~~~~~~ 243 (326)
T PRK11022 221 AHKIIVMYAGQVVETGKAHDIFR 243 (326)
T ss_pred CCEEEEEECCEEEEECCHHHHhh
Confidence 99999999999999999988753
No 325
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-34 Score=324.61 Aligned_cols=205 Identities=26% Similarity=0.327 Sum_probs=171.6
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCC-CCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDL-HHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 259 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35899999999999999999999999999999999999887 999999999875432 2467999999974 5777
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
+||+||+.+.....+.. .. +....++.+++.+||++..++.+++
T Consensus 99 ~tv~enl~~~~~~~~~~--------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 142 (271)
T PRK13632 99 ATVEDDIAFGLENKKVP--------------------PK--------------KMKDIIDDLAKKVGMEDYLDKEPQN-- 142 (271)
T ss_pred ccHHHHHHhHHHHcCCC--------------------HH--------------HHHHHHHHHHHHcCCHHHhhCCccc--
Confidence 89999998753311100 00 0112356688999999888888866
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++ ..+|++++|++
T Consensus 143 ---LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~ 217 (271)
T PRK13632 143 ---LSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSE 217 (271)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999987654578888888875 44 47999999999
Q ss_pred CeEEEEcChhHHH
Q 000753 420 GQIVYQGPRDNVL 432 (1302)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1302)
|+++..|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999988764
No 326
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=327.99 Aligned_cols=216 Identities=24% Similarity=0.321 Sum_probs=178.3
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++. .....+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~----------~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEK----------ESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCC----------CCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 4678888876531 012359999999999999999999999999999999999765 3579999999876
Q ss_pred Ch---hhhcceeEEeccCCC-CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000753 934 NQ---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1302)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1302)
.. ...++.+||++|++. .++..||.||+.+..... ....++..+.++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 43 235677999999974 567789999998764322 122334445688999999998777765 457999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000753 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1302)
Q Consensus 1010 GqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~ 1088 (1302)
|||||++|||||+.+|++|||||||+|||+.++..+++.|++++++ |+|||++||+++ ++ ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLD-EA-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999765 999999999976 34 46999999985 78888
Q ss_pred ecCC
Q 000753 1089 AGPL 1092 (1302)
Q Consensus 1089 ~g~~ 1092 (1302)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 8875
No 327
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.9e-34 Score=367.75 Aligned_cols=205 Identities=27% Similarity=0.389 Sum_probs=170.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1302)
+++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++.+|+.
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~g- 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSG- 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCcc-
Confidence 45899999999999999999999999999999999999997 9999999999887653 5789999999999975
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
|++|||.++.. . ++++ ..+++...+. +..+ -.|++..||.+|+ .+
T Consensus 542 TI~eNi~~~~~-~----------------------~~e~---i~~al~~a~l------~~~i--~~lp~G~dt~ige-~G 586 (686)
T TIGR03797 542 SIFENIAGGAP-L----------------------TLDE---AWEAARMAGL------AEDI--RAMPMGMHTVISE-GG 586 (686)
T ss_pred cHHHHHhcCCC-C----------------------CHHH---HHHHHHHcCc------HHHH--HhccccccccccC-CC
Confidence 99999988532 0 0011 1112111111 1111 2367788999996 46
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
..||||||||++||||++++|++++||||||+||+.+..++.+.|+++ ++|+|++.|++ ++.+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~IiItHr~--~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIVIAHRL--STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEEEecCh--HHHHcCCEEEEEECC
Confidence 779999999999999999999999999999999999999999999875 47888888876 567889999999999
Q ss_pred eEEEEcChhHHHH
Q 000753 421 QIVYQGPRDNVLE 433 (1302)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1302)
+++.+|+++++.+
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999999864
No 328
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-34 Score=322.46 Aligned_cols=215 Identities=24% Similarity=0.342 Sum_probs=173.3
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC---ceeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1302)
.+.++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 367778776542 24699999999999999999999999999999999996431 12479999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1302)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...+...+.++++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87642 234567999999988887 8999999886533211 122334456788888888743 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||++||+++ ++.+.+|++++|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 45799999999999999999999999999999999999999999999986 4899999999975 5677899999998
Q ss_pred cCcEEEEecCC
Q 000753 1082 RGGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1302)
+ |+++..|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 6 788888864
No 329
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=328.41 Aligned_cols=205 Identities=25% Similarity=0.375 Sum_probs=172.2
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCC-CCCCC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDL-HHGEM 260 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 260 (1302)
.+|+|||+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4899999999999999999999999999999999999987 999999998875432 2357999999963 34467
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
||+||+.+.....+.. .. .....++.+++.+||.+..++.+++
T Consensus 95 tv~~~l~~~~~~~~~~--------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~--- 137 (277)
T PRK13652 95 TVEQDIAFGPINLGLD--------------------EE--------------TVAHRVSSALHMLGLEELRDRVPHH--- 137 (277)
T ss_pred cHHHHHHhHHHHcCCC--------------------HH--------------HHHHHHHHHHHHCCChhHhcCCccc---
Confidence 9999998754321110 00 0112356789999999888888876
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++ .++.+.+|+|++|++|
T Consensus 138 --LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~-~~~~~~~drv~~l~~G 214 (277)
T PRK13652 138 --LSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQL-DLVPEMADYIYVMDKG 214 (277)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999999875578888887765 4788899999999999
Q ss_pred eEEEEcChhHHH
Q 000753 421 QIVYQGPRDNVL 432 (1302)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1302)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998875
No 330
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-34 Score=332.24 Aligned_cols=223 Identities=21% Similarity=0.262 Sum_probs=177.5
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC---ceeEEEEEEc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKIS 929 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~ 929 (1302)
..+.++|+++.++. +.+.+|+|||++|++||++||+|+||||||||+++|+|.... .+..|+|.++
T Consensus 79 ~~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~id 147 (329)
T PRK14257 79 NVFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFL 147 (329)
T ss_pred ceEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 35789998876631 124599999999999999999999999999999999996531 2347999999
Q ss_pred CccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000753 930 GYPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGV 1004 (1302)
Q Consensus 930 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~ 1004 (1302)
|.++.. ..+++.++||+|++.+++ .|++||+.|...... ....+...+.+.++++.++|.+-.+..++. .+
T Consensus 148 G~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~~--~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~-~~ 223 (329)
T PRK14257 148 GTNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNNG--INDRKILEKIVEKSLKSAALWDEVKDDLDK-AG 223 (329)
T ss_pred CEEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhcC--CChHHHHHHHHHHHHHHcCCcchhhhhhhC-Cc
Confidence 998742 245678999999998875 799999998643211 111222334567888998875432223332 25
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000753 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1302)
Q Consensus 1005 ~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG 1084 (1302)
.+||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||++||++. .+.+.||++++|++ |
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G 300 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-G 300 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999875 799999999975 45667999999985 8
Q ss_pred EEEEecCCC
Q 000753 1085 RVIYAGPLG 1093 (1302)
Q Consensus 1085 ~~~~~g~~~ 1093 (1302)
++++.|++.
T Consensus 301 ~i~e~g~~~ 309 (329)
T PRK14257 301 WIEEAGETK 309 (329)
T ss_pred EEEEeCCHH
Confidence 999999863
No 331
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=324.47 Aligned_cols=207 Identities=22% Similarity=0.304 Sum_probs=166.3
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC--c-eeEEEEEEcCccCCh-----hhhcceeEEeccCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIKISGYPKNQ-----ETFARVSGYCEQNDIH 951 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~ 951 (1302)
+.+|+|+||+|++||+++|+|+||||||||+++|+|.... . +.+|+|.++|.++.. ...++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 4699999999999999999999999999999999997531 1 247999999987532 1346679999999988
Q ss_pred CCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcccc
Q 000753 952 SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1302)
Q Consensus 952 ~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLD 1031 (1302)
++. |+.||+.+....+. ........++.++++++.+++.+........ .+..||||||||++|||+|+.+|++|+||
T Consensus 98 ~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~Gq~qrv~laral~~~p~llllD 174 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFELSGGQQQRLCIARAIAVKPTMLLMD 174 (251)
T ss_pred ccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhhc-ChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 875 99999987643321 1112233445678899999986521111111 14579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1032 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
|||+|||+.++..+.+.|+++. +|+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 175 EPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 232 (251)
T PRK14244 175 EPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRIVEYNTT 232 (251)
T ss_pred CCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999985 4899999999986 56678999999986 789888874
No 332
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-34 Score=317.50 Aligned_cols=207 Identities=23% Similarity=0.356 Sum_probs=173.1
Q ss_pred cceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCC-C-c-eeEEEEEEcCccC---Chhh---h-cceeEEeccC
Q 000753 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT-G-G-YIEGDIKISGYPK---NQET---F-ARVSGYCEQN 948 (1302)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~-~-g-~~~G~i~i~g~~~---~~~~---~-~~~~gyv~Q~ 948 (1302)
..++++||||++++||++||+|.|||||||+.++|.|..+ + + ..+|+|.++|.++ +.+. + .+.++|++|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 3579999999999999999999999999999999999664 2 3 4568999999864 2222 2 2479999999
Q ss_pred CC--CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc---ccccccCCCCCCCCHHHHHHHHHHHHHhh
Q 000753 949 DI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL---NDSMVGLPGVSGLSTEQRKRLTIAVELVA 1023 (1302)
Q Consensus 949 ~~--~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~---~~~~~g~~~~~~LSgGqrqRl~iA~aL~~ 1023 (1302)
+. +.|.+||.+-+.-....+.... ..++..+.+.++|+.+++.+- .+.+ +.+|||||||||.||.||+.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~~Y-----PhelSGGMrQRV~IAmala~ 170 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLKSY-----PHELSGGMRQRVMIAMALAL 170 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHhhC-----CcccCCcHHHHHHHHHHHhC
Confidence 74 7899999887765554332211 345567788999999999864 3444 56899999999999999999
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1024 NPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1024 ~P~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
+|++||.||||++||...+++|+++|+++.+ .|.++|++|||+. -+.+.||++++|. .|++++.|+..
T Consensus 171 ~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VMY-aG~iVE~g~~~ 239 (316)
T COG0444 171 NPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVMY-AGRIVEEGPVE 239 (316)
T ss_pred CCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEEE-CcEEEEeCCHH
Confidence 9999999999999999999999999999975 6999999999987 4888999999998 58999999963
No 333
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.9e-34 Score=337.73 Aligned_cols=199 Identities=26% Similarity=0.439 Sum_probs=171.7
Q ss_pred ceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC-------CccceEEEEccCCCCCCCCC
Q 000753 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------VPQRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 261 (1302)
|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 999999999999999999999999999999999887 99999999887432 12467999999999999999
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
|+||+.|+.+.... .+ ....++.+++.+||++..|+.+.+
T Consensus 92 v~enl~~~~~~~~~----------------------~~--------------~~~~~~~~l~~~gL~~~~~~~~~~---- 131 (354)
T TIGR02142 92 VRGNLRYGMKRARP----------------------SE--------------RRISFERVIELLGIGHLLGRLPGR---- 131 (354)
T ss_pred HHHHHHHHhhccCh----------------------hH--------------HHHHHHHHHHHcCChhHhcCChhh----
Confidence 99999886431100 00 011346688999999888888876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++..++|+|++|++|+
T Consensus 132 -LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~-~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 132 -LSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSL-QEVLRLADRVVVLEDGR 209 (354)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999999999999999999876578888887765 57889999999999999
Q ss_pred EEEEcChhHHH
Q 000753 422 IVYQGPRDNVL 432 (1302)
Q Consensus 422 iv~~G~~~~~~ 432 (1302)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999988874
No 334
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-34 Score=323.93 Aligned_cols=216 Identities=22% Similarity=0.306 Sum_probs=175.5
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc-e--eEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--IEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~--~~G~i~i~g 930 (1302)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|..+.. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 467888876542 246999999999999999999999999999999999965421 2 479999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1302)
.++.. ..+++.++|++|++.+++ .|++||+.+....+. .....+..+.+.++++.+++.+ ..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87532 234567999999998887 899999987654331 1122333456788899998842 33333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.||++++|+
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 457999999999999999999999999999999999999999999999865 699999999986 6778899999997
Q ss_pred c----CcEEEEecCC
Q 000753 1082 R----GGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~----gG~~~~~g~~ 1092 (1302)
. .|++++.|++
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 3 4899999875
No 335
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=328.00 Aligned_cols=204 Identities=25% Similarity=0.359 Sum_probs=171.2
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC----ccceEEEEccCCC-CCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV----PQRTCAYISQHDL-HHG 258 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 258 (1302)
+++|+|||++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFV 91 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcc
Confidence 35999999999999999999999999999999999999886 999999999875432 2467999999975 466
Q ss_pred CCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCc
Q 000753 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1302)
Q Consensus 259 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 338 (1302)
..||.||+.|.....+.. +. +....++.+++.+||++..++.+++
T Consensus 92 ~~tv~enl~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~~- 136 (274)
T PRK13644 92 GRTVEEDLAFGPENLCLP----------PI------------------------EIRKRVDRALAEIGLEKYRHRSPKT- 136 (274)
T ss_pred cchHHHHHHhhHHHcCCC----------HH------------------------HHHHHHHHHHHHCCCHHHhcCCccc-
Confidence 789999998864321110 00 0112346688999999888888876
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEec
Q 000753 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1302)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~ 418 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|++++.|++. ++ ..+|+|++|+
T Consensus 137 ----LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g~til~~tH~~~-~~-~~~d~v~~l~ 209 (274)
T PRK13644 137 ----LSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-KGKTIVYITHNLE-EL-HDADRIIVMD 209 (274)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCCEEEEEecCHH-HH-hhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999875 4788888877765 55 5799999999
Q ss_pred CCeEEEEcChhHHH
Q 000753 419 EGQIVYQGPRDNVL 432 (1302)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1302)
+|++++.|+.+++.
T Consensus 210 ~G~i~~~g~~~~~~ 223 (274)
T PRK13644 210 RGKIVLEGEPENVL 223 (274)
T ss_pred CCEEEEECCHHHHh
Confidence 99999999988764
No 336
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2.8e-34 Score=323.55 Aligned_cols=207 Identities=23% Similarity=0.338 Sum_probs=172.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC----------------CccceE
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF----------------VPQRTC 247 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~----------------~~~~~~ 247 (1302)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 45999999999999999999999999999999999999887 99999999877532 124679
Q ss_pred EEEccCCCCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCC
Q 000753 248 AYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGL 327 (1302)
Q Consensus 248 ~yv~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL 327 (1302)
+|++|++.+++.+||.||+.++..... +. ...+ ....++.+++.+||
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~------------------~~-~~~~--------------~~~~~~~~l~~~gl 136 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVL------------------GM-ARAE--------------AEKRAMELLDMVGL 136 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhc------------------CC-CHHH--------------HHHHHHHHHHHcCC
Confidence 999999999999999999987532100 00 0000 01124567889999
Q ss_pred cccccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhH
Q 000753 328 DICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPET 407 (1302)
Q Consensus 328 ~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~ 407 (1302)
++..+..+.+ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++
T Consensus 137 ~~~~~~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~-~~~ 210 (252)
T TIGR03005 137 ADKADHMPAQ-----LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEM-GFA 210 (252)
T ss_pred hhHhhcChhh-----cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCH-HHH
Confidence 8877777765 9999999999999999999999999999999999999999999998765577888887766 477
Q ss_pred HhhcCeEEEecCCeEEEEcChhHHH
Q 000753 408 YDLFDDIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 408 ~~~~D~iilL~~G~iv~~G~~~~~~ 432 (1302)
.+++|++++|++|++++.|+.+++.
T Consensus 211 ~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 211 REFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHhcCEEEEEECCEEEEeCCHHHHh
Confidence 8899999999999999999987764
No 337
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=321.02 Aligned_cols=203 Identities=25% Similarity=0.407 Sum_probs=167.9
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC----ccceEEEEccCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV----PQRTCAYISQHDLHHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 259 (1302)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 35999999999999999999999999999999999999887 999999999876543 23579999999999999
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHc-CCcccccccccCc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKIL-GLDICADTMVGDE 338 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 338 (1302)
+||+||+.++..... . + +. ...++.+++.+ +|.+..++.+++
T Consensus 95 ~tv~~~l~~~~~~~~---~-~------------------~~--------------~~~~~~~l~~~~~l~~~~~~~~~~- 137 (237)
T PRK11614 95 MTVEENLAMGGFFAE---R-D------------------QF--------------QERIKWVYELFPRLHERRIQRAGT- 137 (237)
T ss_pred CcHHHHHHHhhhccC---h-h------------------HH--------------HHHHHHHHHHHHHHHHHHhCchhh-
Confidence 999999987532110 0 0 00 00123345555 466556666655
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEec
Q 000753 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1302)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~ 418 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|++ .++.+++|++++|+
T Consensus 138 ----LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~tiii~sH~~-~~~~~~~d~i~~l~ 211 (237)
T PRK11614 138 ----MSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQ-GMTIFLVEQNA-NQALKLADRGYVLE 211 (237)
T ss_pred ----CCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHC-CCEEEEEeCcH-HHHHhhCCEEEEEe
Confidence 9999999999999999999999999999999999999999999998764 78888877665 57889999999999
Q ss_pred CCeEEEEcChhHHH
Q 000753 419 EGQIVYQGPRDNVL 432 (1302)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1302)
+|++++.|+++++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (237)
T PRK11614 212 NGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999998774
No 338
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.6e-34 Score=327.97 Aligned_cols=224 Identities=21% Similarity=0.279 Sum_probs=178.2
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.+..+.. +...+.+.+|+|+|++|++||++||+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 77 (267)
T PRK15112 4 LLEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPL 77 (267)
T ss_pred eEEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 3678888876631100 000112469999999999999999999999999999999999765 3479999999876
Q ss_pred Ch---hhhcceeEEeccCCC--CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCC
Q 000753 934 NQ---ETFARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGL 1007 (1302)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~--~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~L 1007 (1302)
.. ...++.++|++|++. +++.+|+.|++.+...... ........+.++++++.++|. +..+.. +..|
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~L 150 (267)
T PRK15112 78 HFGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHML 150 (267)
T ss_pred CCCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhc
Confidence 42 223456999999975 5678899999987654321 122334445688999999994 555554 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEE
Q 000753 1008 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1302)
Q Consensus 1008 SgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~ 1086 (1302)
|||||||++||++|+.+|+||||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++...||++++|++ |++
T Consensus 151 S~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i 228 (267)
T PRK15112 151 APGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEV 228 (267)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999764 899999999986 56678999999985 788
Q ss_pred EEecCC
Q 000753 1087 IYAGPL 1092 (1302)
Q Consensus 1087 ~~~g~~ 1092 (1302)
++.|+.
T Consensus 229 ~~~~~~ 234 (267)
T PRK15112 229 VERGST 234 (267)
T ss_pred EecCCH
Confidence 888764
No 339
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=3.3e-34 Score=325.13 Aligned_cols=208 Identities=23% Similarity=0.330 Sum_probs=171.7
Q ss_pred cceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCC--
Q 000753 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHD-- 254 (1302)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d-- 254 (1302)
.+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 99 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPS 99 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhh
Confidence 356999999999999999999999999999999999999887 999999998876432 245799999996
Q ss_pred CCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc-ccccc
Q 000753 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADT 333 (1302)
Q Consensus 255 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 333 (1302)
.+++.+||+||+.+...... +. .++ .....++.+++.+||+ ...+.
T Consensus 100 ~~~~~~tv~~~l~~~~~~~~------------------~~--~~~-------------~~~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 100 AVNPRMTVRQIIGEPLRHLT------------------SL--DES-------------EQKARIAELLDMVGLRSEDADK 146 (265)
T ss_pred hcCCCCCHHHHHHHHHHHhc------------------CC--CHH-------------HHHHHHHHHHHHcCCChhhhhC
Confidence 46678999999976432100 00 000 0112346688999996 56777
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCe
Q 000753 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1302)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ 413 (1302)
.+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ ..+.+++|+
T Consensus 147 ~~~~-----LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~-~~~~~~~d~ 220 (265)
T TIGR02769 147 LPRQ-----LSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDL-RLVQSFCQR 220 (265)
T ss_pred Chhh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCH-HHHHHHhcE
Confidence 7765 9999999999999999999999999999999999999999999998765577888887765 477789999
Q ss_pred EEEecCCeEEEEcChhHHH
Q 000753 414 IILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1302)
+++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 221 VAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEeCCEEEEECCHHHHc
Confidence 9999999999999998774
No 340
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=356.13 Aligned_cols=218 Identities=26% Similarity=0.351 Sum_probs=181.4
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
++++|+++.+ +++.+|+|+||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 5 i~~~~l~~~~-------------~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAF-------------PGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEe-------------CCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 6777877654 234699999999999999999999999999999999997653 4799999998753
Q ss_pred h----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000753 935 Q----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1302)
Q Consensus 935 ~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1302)
. ...++.+||++|++.+++.+||+||+.+....+.. ......+.++.+.++++.++|.+..++.+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 2 11245699999999999999999999886432111 11122334456889999999988777764 47999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000753 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1302)
Q Consensus 1010 GqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~ 1089 (1302)
|||||++||+||+.+|++|||||||+|||+.++..+++.|++++++|.|||++||+++ ++...||++++|.+ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999986 57778999999985 789988
Q ss_pred cCCCc
Q 000753 1090 GPLGH 1094 (1302)
Q Consensus 1090 g~~~~ 1094 (1302)
|+..+
T Consensus 223 ~~~~~ 227 (501)
T PRK10762 223 REVAD 227 (501)
T ss_pred cCcCc
Confidence 88764
No 341
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=2.8e-34 Score=360.35 Aligned_cols=209 Identities=27% Similarity=0.428 Sum_probs=173.5
Q ss_pred cceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCCCC
Q 000753 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGE 259 (1302)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 259 (1302)
++++|+|+|++++|||.+||+||||||||||+++|.|.++|+ +|+|.+||+++++... ++.++||+|++.+|.
T Consensus 341 ~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~- 416 (567)
T COG1132 341 KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS- 416 (567)
T ss_pred CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-
Confidence 356999999999999999999999999999999999999997 9999999999887654 688999999999998
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
-||+|||.++..- .+.++..+++..++ ..|. +. .|+++.||.|| +.
T Consensus 417 ~TI~~NI~~g~~~-------------------------at~eei~~a~k~a~-----~~d~-I~--~lp~g~dt~vg-e~ 462 (567)
T COG1132 417 GTIRENIALGRPD-------------------------ATDEEIEEALKLAN-----AHEF-IA--NLPDGYDTIVG-ER 462 (567)
T ss_pred ccHHHHHhcCCCC-------------------------CCHHHHHHHHHHhC-----hHHH-HH--hCcccccceec-CC
Confidence 6999999986321 01122222222221 1122 22 35889999999 45
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
+..||||||||++||||++.+|+||+||||||+||+.+...|.+.++++.+ ++|+++..|.+ .+...+|+|++|++
T Consensus 463 G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~--~rT~iiIaHRl--sti~~aD~IiVl~~ 538 (567)
T COG1132 463 GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLK--GRTTLIIAHRL--STIKNADRIIVLDN 538 (567)
T ss_pred CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhc--CCEEEEEeccH--hHHHhCCEEEEEEC
Confidence 667999999999999999999999999999999999999999999997764 57888877766 45556999999999
Q ss_pred CeEEEEcChhHHHH
Q 000753 420 GQIVYQGPRDNVLE 433 (1302)
Q Consensus 420 G~iv~~G~~~~~~~ 433 (1302)
|+++++|+++++..
T Consensus 539 G~i~e~G~h~eLl~ 552 (567)
T COG1132 539 GRIVERGTHEELLA 552 (567)
T ss_pred CEEEEecCHHHHHH
Confidence 99999999999875
No 342
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=321.39 Aligned_cols=215 Identities=25% Similarity=0.293 Sum_probs=173.0
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc---eeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1302)
.+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+.. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 356777776542 346999999999999999999999999999999999965421 2479999999
Q ss_pred ccCC----hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000753 931 YPKN----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGLP 1002 (1302)
Q Consensus 931 ~~~~----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~~ 1002 (1302)
.++. ....++.++|++|++.+++ .||.||+.+...... ....+...+.+.++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 142 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKSH---- 142 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhcC----
Confidence 8753 2234567999999998887 899999987643221 1112233456778888888753 22332
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
+..||||||||++|||+|+.+|++|||||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.||++++|++
T Consensus 143 -~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~ 219 (249)
T PRK14253 143 -AFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM 219 (249)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999999875 699999999986 57778999999985
Q ss_pred CcEEEEecCC
Q 000753 1083 GGRVIYAGPL 1092 (1302)
Q Consensus 1083 gG~~~~~g~~ 1092 (1302)
|+++..|+.
T Consensus 220 -G~i~~~g~~ 228 (249)
T PRK14253 220 -GELVEHDDT 228 (249)
T ss_pred -CEEEEeCCH
Confidence 799988874
No 343
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-34 Score=321.87 Aligned_cols=214 Identities=24% Similarity=0.358 Sum_probs=173.5
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc---eeEEEEEEcCc
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISGY 931 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g~ 931 (1302)
++++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 57788776542 246999999999999999999999999999999999965321 25799999998
Q ss_pred cCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc----ccccccCC
Q 000753 932 PKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL----NDSMVGLP 1002 (1302)
Q Consensus 932 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~~g~~ 1002 (1302)
+... ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.+. .+..
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 143 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELNKP---- 143 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHhCC----
Confidence 7532 234567999999998887 899999987653321 11222334557888999988542 3333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
+.+||||||||++||+||+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.+|++++|++
T Consensus 144 -~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~ 220 (250)
T PRK14262 144 -GTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR 220 (250)
T ss_pred -hhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999999865 799999999986 57788999999986
Q ss_pred CcEEEEecCC
Q 000753 1083 GGRVIYAGPL 1092 (1302)
Q Consensus 1083 gG~~~~~g~~ 1092 (1302)
|+++..|+.
T Consensus 221 -G~i~~~g~~ 229 (250)
T PRK14262 221 -GELIEYGPT 229 (250)
T ss_pred -CEEEEecCH
Confidence 788888874
No 344
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=3.1e-34 Score=318.68 Aligned_cols=204 Identities=23% Similarity=0.290 Sum_probs=168.6
Q ss_pred EeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCC----CCCccceEEECCcccCCCCc-cceEEEEccCCC--CCC
Q 000753 186 ILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGK----DLRASGKITYCGHELNEFVP-QRTCAYISQHDL--HHG 258 (1302)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~----~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~ 258 (1302)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999987 5 9999999998765433 257999999984 557
Q ss_pred CCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc---ccccccc
Q 000753 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD---ICADTMV 335 (1302)
Q Consensus 259 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~---~~~dt~v 335 (1302)
.+|+.|++.+.....+.. .. +....++.+++.+||+ +..++.+
T Consensus 78 ~~t~~~~~~~~~~~~~~~--------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~~ 123 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKL--------------------SK--------------QARALILEALEAVGLPDPEEVLKKYP 123 (230)
T ss_pred ccCHHHHHHHHHHHcCcc--------------------HH--------------HHHHHHHHHHHHcCCCchHHHHhCCh
Confidence 789999997753221100 00 0112356688999998 3456666
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEE
Q 000753 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1302)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ii 415 (1302)
++ |||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++++..+.|+|++.|++ .++..++|+++
T Consensus 124 ~~-----LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~-~~~~~~~d~i~ 197 (230)
T TIGR02770 124 FQ-----LSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDL-GVVARIADEVA 197 (230)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEE
Confidence 65 9999999999999999999999999999999999999999999998765567888887765 47888999999
Q ss_pred EecCCeEEEEcChhHHH
Q 000753 416 LLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 416 lL~~G~iv~~G~~~~~~ 432 (1302)
+|++|+++..|+.+++.
T Consensus 198 ~l~~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 198 VMDDGRIVERGTVKEIF 214 (230)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988764
No 345
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=2.8e-34 Score=317.46 Aligned_cols=196 Identities=27% Similarity=0.355 Sum_probs=161.3
Q ss_pred ccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChhhhcceeEEeccCCCCCC
Q 000753 874 GVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSP 953 (1302)
Q Consensus 874 ~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~ 953 (1302)
++.++.+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+
T Consensus 29 ~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~ 97 (224)
T cd03220 29 KGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNP 97 (224)
T ss_pred hhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCC
Confidence 345566789999999999999999999999999999999999765 357999999976421 111233457
Q ss_pred CCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCC
Q 000753 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1302)
Q Consensus 954 ~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEP 1033 (1302)
.+||+||+.+...... .......+.++++++.+++.+..++.+ ..||||||||++|||+|+.+|++|+||||
T Consensus 98 ~~tv~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP 169 (224)
T cd03220 98 ELTGRENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEV 169 (224)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 7999999987654321 223344456788999999988777764 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1034 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
|+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 170 ~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 170 LAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred cccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 9999999999999999998777899999999975 56678999999985 7887654
No 346
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-34 Score=322.77 Aligned_cols=206 Identities=30% Similarity=0.451 Sum_probs=172.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 260 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 45999999999999999999999999999999999999887 999999998765432 235799999999888889
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
||+||+.+.....+.. .. +....++.+++.+||++..++.+++
T Consensus 92 tv~e~l~~~~~~~~~~--------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~--- 134 (258)
T PRK13548 92 TVEEVVAMGRAPHGLS--------------------RA--------------EDDALVAAALAQVDLAHLAGRDYPQ--- 134 (258)
T ss_pred CHHHHHHhhhcccCCC--------------------cH--------------HHHHHHHHHHHHcCCHhHhcCCccc---
Confidence 9999998753211100 00 0011245688899998888888876
Q ss_pred CCCChHHHHHHHHHHHHh------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeE
Q 000753 341 RGISGGQKKRVTTGEMLV------GTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~------~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~i 414 (1302)
|||||||||+||+||+ .+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|
T Consensus 135 --LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~-~~~~~~~d~i 211 (258)
T PRK13548 135 --LSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDL-NLAARYADRI 211 (258)
T ss_pred --CCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCH-HHHHHhcCEE
Confidence 9999999999999999 599999999999999999999999999998744577888887765 4777899999
Q ss_pred EEecCCeEEEEcChhHHH
Q 000753 415 ILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 415 ilL~~G~iv~~G~~~~~~ 432 (1302)
++|++|++++.|+.+++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999987764
No 347
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=3.1e-34 Score=324.29 Aligned_cols=215 Identities=25% Similarity=0.305 Sum_probs=173.3
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc-
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP- 932 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~- 932 (1302)
.++++|+++.++ ++.+|+|+||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 367888876542 2469999999999999999999999999999999999765 347999999986
Q ss_pred ----CCh---hh----hcceeEEeccCCC--CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc-ccccc
Q 000753 933 ----KNQ---ET----FARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSM 998 (1302)
Q Consensus 933 ----~~~---~~----~~~~~gyv~Q~~~--~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 998 (1302)
+.. .. .++.++|++|++. +.+.+|+.||+.+...... .....+....+.++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 432 11 2346999999974 5677899999876432211 1112233456789999999963 44554
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeE
Q 000753 999 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1077 (1302)
Q Consensus 999 ~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i 1077 (1302)
+..||||||||++|||||+.+|++|||||||+|||+.+...+++.|++++++ |.|||++||+++ .+...+|++
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4579999999999999999999999999999999999999999999998764 899999999975 455689999
Q ss_pred EEEecCcEEEEecCC
Q 000753 1078 LLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1078 ~~l~~gG~~~~~g~~ 1092 (1302)
++|++ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 899998875
No 348
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=5e-34 Score=320.60 Aligned_cols=206 Identities=22% Similarity=0.353 Sum_probs=169.5
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCccceEEECCcccCCC-----CccceEEEEccCCCCC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1302)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|+++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 5899999999999999999999999999999999999763 12389999999987542 1246799999999888
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc----ccccc
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICADT 333 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 333 (1302)
+ +||+||+.+..+..+.. +..+ ....++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~-------------------~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIK-------------------DKKE--------------LDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCC-------------------CHHH--------------HHHHHHHHHHHcCCCcchhhHhhC
Confidence 8 99999998764322100 0000 011345678899997 66677
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCe
Q 000753 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1302)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ 413 (1302)
.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|+
T Consensus 141 ~~~~-----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiivsH~~-~~~~~~~d~ 212 (247)
T TIGR00972 141 SALG-----LSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--KYTIVIVTHNM-QQAARISDR 212 (247)
T ss_pred Cccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCeEEEEecCH-HHHHHhCCE
Confidence 6665 999999999999999999999999999999999999999999999876 36777777665 478889999
Q ss_pred EEEecCCeEEEEcChhHHH
Q 000753 414 IILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1302)
+++|++|+++++|+.+++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 349
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-34 Score=319.96 Aligned_cols=206 Identities=20% Similarity=0.294 Sum_probs=165.8
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC--CccceEEECCcccCCC-----CccceEEEEccCCCCC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL--RASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1302)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+. ..+|+|.++|+++... ..++.++|++|++.++
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 58999999999999999999999999999999999987631 2389999999876421 1246799999998888
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCC----cccccc
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGL----DICADT 333 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL----~~~~dt 333 (1302)
+ +||+||+.|+....+... ..+ ....++..++.+|| ++..++
T Consensus 101 ~-~tv~eni~~~~~~~~~~~-------------------~~~--------------~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 L-MSIYDNISYGPKIHGTKD-------------------KKK--------------LDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred c-CcHHHHHHHHHHhcCCCC-------------------HHH--------------HHHHHHHHHHHhCCchhhHHHHhC
Confidence 5 899999988643221000 000 01124456777776 344566
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCe
Q 000753 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1302)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ 413 (1302)
.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|+
T Consensus 147 ~~~~-----LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tvii~sH~~-~~~~~~~d~ 218 (254)
T PRK14273 147 NALS-----LSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE--SYTIIIVTHNM-QQAGRISDR 218 (254)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc--CCEEEEEeCCH-HHHHHhCCE
Confidence 6655 999999999999999999999999999999999999999999999864 57877777665 477889999
Q ss_pred EEEecCCeEEEEcChhHHH
Q 000753 414 IILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1302)
|++|++|+++.+|+.+++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 350
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=3.7e-34 Score=309.32 Aligned_cols=190 Identities=52% Similarity=0.874 Sum_probs=160.4
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCC--CCceeEEEEEEcCc
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYIEGDIKISGY 931 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~--~~g~~~G~i~i~g~ 931 (1302)
.+.++|+++.++... +...+.+|+|+|+++++||+++|+||||||||||+++|+|.. . +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 467888887663210 001246999999999999999999999999999999999976 4 45899999999
Q ss_pred cCChhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000753 932 PKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1302)
Q Consensus 932 ~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1302)
+......++.++|++|++.+++.+|++||+.+...+. .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8765455678999999999999999999997642110 499999
Q ss_pred HHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1012 rqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
|||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++.++.+.+|++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999999777999999999986457778999999985 7877653
No 351
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=4.3e-34 Score=322.24 Aligned_cols=214 Identities=21% Similarity=0.274 Sum_probs=173.1
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC--ceeEEEEEEcC
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYIEGDIKISG 930 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g~~~G~i~i~g 930 (1302)
..++++|+++.+ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 3 ~~l~~~~l~~~~--------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g 68 (254)
T PRK10418 3 QQIELRNIALQA--------------AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDG 68 (254)
T ss_pred cEEEEeCeEEEe--------------ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECC
Confidence 357888887654 13599999999999999999999999999999999997653 11579999999
Q ss_pred ccCChhhh-cceeEEeccCCC--CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc---cccccccCCCC
Q 000753 931 YPKNQETF-ARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS---LNDSMVGLPGV 1004 (1302)
Q Consensus 931 ~~~~~~~~-~~~~gyv~Q~~~--~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~---~~~~~~g~~~~ 1004 (1302)
.++..... ++.++|++|++. +.+..|+.+++.+.+.... ... ..+.++++++.++|.+ ..+.. +
T Consensus 69 ~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~ 138 (254)
T PRK10418 69 KPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----P 138 (254)
T ss_pred eeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----C
Confidence 87643222 356999999974 4566899998876433221 111 2256789999999976 33444 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecC
Q 000753 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1302)
Q Consensus 1005 ~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~g 1083 (1302)
..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~- 216 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH- 216 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999998754 899999999986 56678999999985
Q ss_pred cEEEEecCC
Q 000753 1084 GRVIYAGPL 1092 (1302)
Q Consensus 1084 G~~~~~g~~ 1092 (1302)
|++++.|+.
T Consensus 217 G~i~~~~~~ 225 (254)
T PRK10418 217 GRIVEQGDV 225 (254)
T ss_pred CEEEEecCH
Confidence 789988874
No 352
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=6.9e-33 Score=353.20 Aligned_cols=123 Identities=24% Similarity=0.304 Sum_probs=99.7
Q ss_pred CCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhh---CCCCcc
Q 000753 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLPGVSGLSTEQRKRLTIAVELVA---NPSIIF 1029 (1302)
Q Consensus 954 ~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqRl~iA~aL~~---~P~ill 1029 (1302)
.+||.|.+.|...+. . .....++|+.++|... .++. +..|||||+||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~------i~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---S------ISRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---c------hhHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 467777776654321 1 1124578888999753 4444 45799999999999999997 599999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe-----cCcEEEEecCC
Q 000753 1030 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-----RGGRVIYAGPL 1092 (1302)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~-----~gG~~~~~g~~ 1092 (1302)
|||||+|||+.....+++.|+++.++|.|||+++|+++ ....+|+++.|. +||++++.|++
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 446799999994 57999999875
No 353
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=3.4e-34 Score=318.15 Aligned_cols=202 Identities=27% Similarity=0.323 Sum_probs=168.0
Q ss_pred eeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCCCHHHHH
Q 000753 187 LKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRETL 266 (1302)
Q Consensus 187 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVrE~l 266 (1302)
|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999887 9999999998765332 348999999999999999999
Q ss_pred HhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCChH
Q 000753 267 DFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGG 346 (1302)
Q Consensus 267 ~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGG 346 (1302)
.+.......+ ... . +....++.+++.+||++..++.+++ ||||
T Consensus 76 ~~~~~~~~~~--------~~~----------~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPD--------LSK----------S--------------ERRAIVEEHIALVGLTEAADKRPGQ-----LSGG 118 (230)
T ss_pred HHHHHhcccC--------CCH----------H--------------HHHHHHHHHHHHcCCHHHHcCChhh-----CCHH
Confidence 8753200000 000 0 0011345688999999888888876 9999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEEEEc
Q 000753 347 QKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQG 426 (1302)
Q Consensus 347 qkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv~~G 426 (1302)
|||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHRVTVLMVTHDV-DEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhcCEEEEEeCCcEeccc
Confidence 999999999999999999999999999999999999999998765577888887765 4788899999999999999988
Q ss_pred ChhHH
Q 000753 427 PRDNV 431 (1302)
Q Consensus 427 ~~~~~ 431 (1302)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65543
No 354
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-34 Score=324.15 Aligned_cols=220 Identities=25% Similarity=0.299 Sum_probs=176.4
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC---ceeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1302)
.+.++|+++.++ ++.+|+||||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 468888887653 34699999999999999999999999999999999997542 13579999999
Q ss_pred ccCCh----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000753 931 YPKNQ----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSG 1006 (1302)
Q Consensus 931 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 1006 (1302)
.++.. ...++.++|++|++.+++ .|++||+.+...... ....++....+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87532 234667999999998887 899999987643221 12233344456788999998643211111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEE
Q 000753 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1302)
Q Consensus 1007 LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~ 1086 (1302)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.+ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 589999999986 56788999999985 799
Q ss_pred EEecCCC
Q 000753 1087 IYAGPLG 1093 (1302)
Q Consensus 1087 ~~~g~~~ 1093 (1302)
++.|+..
T Consensus 241 ~~~g~~~ 247 (276)
T PRK14271 241 VEEGPTE 247 (276)
T ss_pred EEeCCHH
Confidence 9988753
No 355
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.2e-34 Score=319.58 Aligned_cols=212 Identities=25% Similarity=0.367 Sum_probs=173.1
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc----cceEEEEccCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 46999999999999999999999999999999999999887 9999999987754322 3469999999999999
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
+||+||+.++...... .+.... + .. . .+....++.+++.+||++..++.+++
T Consensus 92 ~tv~~nl~~~~~~~~~--~~~~~~---------~-~~-~-------------~~~~~~~~~~l~~~~l~~~~~~~~~~-- 143 (242)
T TIGR03411 92 LTVFENLELALPRDKS--VFASLF---------F-RL-S-------------AEEKDRIEEVLETIGLADEADRLAGL-- 143 (242)
T ss_pred CCHHHHHHHhhhcccc--cccccc---------c-cc-H-------------HHHHHHHHHHHHHcCCchhhcCChhh--
Confidence 9999999885331100 000000 0 00 0 00112356788999999888888876
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.++||+|++|++
T Consensus 144 ---LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~~sH~~-~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 144 ---LSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--KHSVVVVEHDM-EFVRSIADKVTVLHQ 217 (242)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--CCEEEEEECCH-HHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999865 57888877765 478889999999999
Q ss_pred CeEEEEcChhHHH
Q 000753 420 GQIVYQGPRDNVL 432 (1302)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1302)
|+++++|+.+++.
T Consensus 218 g~~~~~~~~~~~~ 230 (242)
T TIGR03411 218 GSVLAEGSLDQVQ 230 (242)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999987753
No 356
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-34 Score=328.43 Aligned_cols=205 Identities=22% Similarity=0.328 Sum_probs=169.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC-------CccceEEEEccCCC-
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------VPQRTCAYISQHDL- 255 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~- 255 (1302)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 45999999999999999999999999999999999999987 99999999987532 12357999999962
Q ss_pred CCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc-cccccc
Q 000753 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTM 334 (1302)
Q Consensus 256 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 334 (1302)
.+..+||+||+.|+....+.. +. +....++.+++.+||+ +..++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS----------ED------------------------EAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCChhHhhCC
Confidence 333589999998754321100 00 0111346688999997 567888
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeE
Q 000753 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1302)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~i 414 (1302)
+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|++++.|+ ..++.++||++
T Consensus 143 ~~~-----LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~g~tvlivsH~-~~~~~~~~d~v 215 (287)
T PRK13641 143 PFE-----LSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-AGHTVILVTHN-MDDVAEYADDV 215 (287)
T ss_pred ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeCC-HHHHHHhCCEE
Confidence 776 999999999999999999999999999999999999999999999865 37787777655 45788999999
Q ss_pred EEecCCeEEEEcChhHHH
Q 000753 415 ILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 415 ilL~~G~iv~~G~~~~~~ 432 (1302)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 357
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-34 Score=323.77 Aligned_cols=204 Identities=23% Similarity=0.292 Sum_probs=171.1
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCC-CCCCC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDL-HHGEM 260 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 260 (1302)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 4899999999999999999999999999999999999887 999999999875432 2467999999974 67788
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
|+++|+.|.....+.. . . +....++.+++.+||.+..|+.+++
T Consensus 100 ~v~~~~~~~~~~~~~~--~------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~~~--- 142 (269)
T PRK13648 100 IVKYDVAFGLENHAVP--Y------------------D--------------EMHRRVSEALKQVDMLERADYEPNA--- 142 (269)
T ss_pred cHHHHHHhhHHhcCCC--H------------------H--------------HHHHHHHHHHHHcCCchhhhCCccc---
Confidence 9999998864321110 0 0 0011345678999998888877765
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++. .+|+|++|++|
T Consensus 143 --LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~G 218 (269)
T PRK13648 143 --LSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNKG 218 (269)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999987655788888888764 555 49999999999
Q ss_pred eEEEEcChhHHH
Q 000753 421 QIVYQGPRDNVL 432 (1302)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1302)
++++.|+.+++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999988764
No 358
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-34 Score=322.44 Aligned_cols=221 Identities=22% Similarity=0.298 Sum_probs=174.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc----cceEEEEccCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1302)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.+++.
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 46999999999999999999999999999999999999887 9999999998764321 2358999999999999
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
+||+||+.++....... +....+... ....+. + .+....++..++.+||++..++.+++
T Consensus 95 ~tv~enl~~~~~~~~~~---~~~~~~~~~---~~~~~~-~------------~~~~~~~~~~l~~~gl~~~~~~~~~~-- 153 (255)
T PRK11300 95 MTVIENLLVAQHQQLKT---GLFSGLLKT---PAFRRA-E------------SEALDRAATWLERVGLLEHANRQAGN-- 153 (255)
T ss_pred CcHHHHHHHhhhccccc---hhhhhhccc---cccccc-h------------hHHHHHHHHHHHhCChhhhhhCChhh--
Confidence 99999999864311000 000000000 000000 0 00112356678899998888888876
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|++
T Consensus 154 ---LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~-~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 154 ---LAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDM-KLVMGISDRIYVVNQ 229 (255)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCH-HHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999998765577888887765 578899999999999
Q ss_pred CeEEEEcChhHHH
Q 000753 420 GQIVYQGPRDNVL 432 (1302)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1302)
|++++.|+.+++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999988763
No 359
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=5.4e-34 Score=315.39 Aligned_cols=198 Identities=27% Similarity=0.377 Sum_probs=170.0
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCCCHH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVr 263 (1302)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .+.++|++|++.+++.+||+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 46999999999999999999999999999999999999887 999999998765422 35799999999999999999
Q ss_pred HHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCC
Q 000753 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1302)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 343 (1302)
||+.+.....+. + ...+..+++.+||++..|..+++ |
T Consensus 89 ~~~~~~~~~~~~--------------------~------------------~~~~~~~l~~~~l~~~~~~~~~~-----L 125 (223)
T TIGR03740 89 ENLKVHTTLLGL--------------------P------------------DSRIDEVLNIVDLTNTGKKKAKQ-----F 125 (223)
T ss_pred HHHHHHHHHcCC--------------------C------------------HHHHHHHHHHcCCcHHHhhhHhh-----C
Confidence 999875332110 0 01235578899999888888776 9
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000753 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIV 423 (1302)
Q Consensus 344 SGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv 423 (1302)
|||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++. ++.+++|++++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QGITVILSSHILS-EVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEcCCHH-HHHHhcCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999999875 3778888887764 678899999999999999
Q ss_pred EEcChhH
Q 000753 424 YQGPRDN 430 (1302)
Q Consensus 424 ~~G~~~~ 430 (1302)
+.|+..+
T Consensus 204 ~~~~~~~ 210 (223)
T TIGR03740 204 YQGKINK 210 (223)
T ss_pred EecChhh
Confidence 9998653
No 360
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-34 Score=329.98 Aligned_cols=209 Identities=20% Similarity=0.252 Sum_probs=174.4
Q ss_pred cceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCC--
Q 000753 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHD-- 254 (1302)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d-- 254 (1302)
.+.+|+|||++|++|++++|+|+||||||||+++|+|.++++ +|+|.++|.++.... .++.++||+|++
T Consensus 27 ~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~ 103 (327)
T PRK11308 27 LVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYG 103 (327)
T ss_pred ceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchh
Confidence 356999999999999999999999999999999999999886 999999999876542 245799999997
Q ss_pred CCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc-ccccc
Q 000753 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADT 333 (1302)
Q Consensus 255 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 333 (1302)
.+.|.+||.+++.+..+.... +.+. +....+..+++.+||+ ...++
T Consensus 104 ~l~p~~~v~~~l~~~~~~~~~---------~~~~------------------------~~~~~~~~~l~~~gL~~~~~~~ 150 (327)
T PRK11308 104 SLNPRKKVGQILEEPLLINTS---------LSAA------------------------ERREKALAMMAKVGLRPEHYDR 150 (327)
T ss_pred hcCCccCHHHHHHHHHHHccC---------CCHH------------------------HHHHHHHHHHHHCCCChHHhcC
Confidence 588999999999765432110 0000 0112356789999996 46677
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCe
Q 000753 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1302)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ 413 (1302)
.+++ |||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+..+.|+|++.|. ...+.+++|+
T Consensus 151 ~p~~-----LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHd-l~~~~~~adr 224 (327)
T PRK11308 151 YPHM-----FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHD-LSVVEHIADE 224 (327)
T ss_pred CCcc-----CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhCCE
Confidence 7766 999999999999999999999999999999999999999999999987667787777655 4577789999
Q ss_pred EEEecCCeEEEEcChhHHHH
Q 000753 414 IILLSEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 414 iilL~~G~iv~~G~~~~~~~ 433 (1302)
|++|++|++++.|+.+++.+
T Consensus 225 v~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 225 VMVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEEECCEEEEECCHHHHhc
Confidence 99999999999999988753
No 361
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.1e-34 Score=317.09 Aligned_cols=196 Identities=24% Similarity=0.321 Sum_probs=164.1
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1302)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 46999999999999999999999999999999999999887 999999998875432 246799999999888
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
+.+||+||+.+.....+.. ..+ ....++.+++.+||++..++.+++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~--------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 137 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGAS--------------------GDD--------------IRRRVSAALDKVGLLDKAKNFPIQ 137 (222)
T ss_pred ccccHHHHHHhHHHhcCCC--------------------HHH--------------HHHHHHHHHHHcCChhhhhCCchh
Confidence 8999999998854322110 000 011245678899998877777766
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++. +.|++++.|++ .++..++|+|++|
T Consensus 138 -----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~tiii~sH~~-~~~~~~~d~i~~l 210 (222)
T PRK10908 138 -----LSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRV-GVTVLMATHDI-GLISRRSYRMLTL 210 (222)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998764 67777777665 4777889999999
Q ss_pred cCCeEE
Q 000753 418 SEGQIV 423 (1302)
Q Consensus 418 ~~G~iv 423 (1302)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999985
No 362
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=4.2e-34 Score=360.44 Aligned_cols=209 Identities=23% Similarity=0.364 Sum_probs=171.9
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1302)
+++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 45999999999999999999999999999999999999997 9999999999876543 578999999999997 5
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
|++|||.++..-. .+.++..+++...+ .+..++ .|++..||.+|+ .+
T Consensus 432 Ti~~Ni~~~~~~~------------------------~~~~~i~~al~~~~------l~~~i~--~lp~Gldt~ig~-~g 478 (582)
T PRK11176 432 TIANNIAYARTEQ------------------------YSREQIEEAARMAY------AMDFIN--KMDNGLDTVIGE-NG 478 (582)
T ss_pred hHHHHHhcCCCCC------------------------CCHHHHHHHHHHhC------cHHHHH--hcccccCceeCC-CC
Confidence 9999998752100 01111111111111 111222 367889999996 35
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
+.||||||||++|||||+++|+|++||||||+||+.++..+.+.|+++.. ++|+|++.|++ +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~--~~tvI~VtHr~--~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQK--NRTSLVIAHRL--STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhC--CCEEEEEecch--HHHHhCCEEEEEECC
Confidence 67999999999999999999999999999999999999999999998754 68988888876 577889999999999
Q ss_pred eEEEEcChhHHHH
Q 000753 421 QIVYQGPRDNVLE 433 (1302)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1302)
+++.+|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999998864
No 363
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-34 Score=322.43 Aligned_cols=221 Identities=22% Similarity=0.286 Sum_probs=176.0
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc---eeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1302)
.++++|+++.++ +..+|+|+||++++||++||+|+||||||||+++|+|...+. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 478888887652 235999999999999999999999999999999999965431 1368999999
Q ss_pred ccCC-----hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000753 931 YPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1302)
Q Consensus 931 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1302)
.++. ....++.++|++|++.+++ .|+.||+.+...... .....+..+.+.++++.+++.+..+..... .+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVG--WRPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 8752 1234567999999988888 899999987643221 012233345678899999885422111111 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecC-
Q 000753 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRG- 1083 (1302)
Q Consensus 1006 ~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~g- 1083 (1302)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||++||+++ ++.+.||++++|+++
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999864 5899999999986 577889999999853
Q ss_pred ---cEEEEecCC
Q 000753 1084 ---GRVIYAGPL 1092 (1302)
Q Consensus 1084 ---G~~~~~g~~ 1092 (1302)
|++++.|++
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 899999875
No 364
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-34 Score=325.82 Aligned_cols=206 Identities=24% Similarity=0.302 Sum_probs=172.6
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC----ccceEEEEccCCC-CCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV----PQRTCAYISQHDL-HHG 258 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 258 (1302)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 46999999999999999999999999999999999999987 999999999875421 2467999999974 233
Q ss_pred CCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCc
Q 000753 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1302)
Q Consensus 259 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 338 (1302)
..||.|++.|+....+.. . . +....++++++.+||++..++.+++
T Consensus 100 ~~~v~~~l~~~~~~~~~~----------~----------~--------------~~~~~~~~~l~~~gL~~~~~~~~~~- 144 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIP----------P----------E--------------EIRERVDESLKKVGMYEYRRHAPHL- 144 (280)
T ss_pred cccHHHHHHhhHhhcCCC----------H----------H--------------HHHHHHHHHHHHCCCHhHhhCCccc-
Confidence 469999998864322110 0 0 0112356789999999888888876
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEec
Q 000753 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1302)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~ 418 (1302)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++. ++. .+|++++|+
T Consensus 145 ----LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~ 218 (280)
T PRK13633 145 ----LSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMD 218 (280)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEE
Confidence 99999999999999999999999999999999999999999999997655789888888775 454 499999999
Q ss_pred CCeEEEEcChhHHHH
Q 000753 419 EGQIVYQGPRDNVLE 433 (1302)
Q Consensus 419 ~G~iv~~G~~~~~~~ 433 (1302)
+|+++++|+++++..
T Consensus 219 ~G~i~~~g~~~~~~~ 233 (280)
T PRK13633 219 SGKVVMEGTPKEIFK 233 (280)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999988753
No 365
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-34 Score=323.35 Aligned_cols=216 Identities=24% Similarity=0.313 Sum_probs=175.6
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC---ceeEEEEEEc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKIS 929 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~ 929 (1302)
..++++|+++.+. ++.+|+|+||+|++||+++|+|+||||||||+++|+|.... .+.+|+|.++
T Consensus 24 ~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~ 90 (272)
T PRK14236 24 TALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLD 90 (272)
T ss_pred cEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEEC
Confidence 3578889887652 24699999999999999999999999999999999997542 1257999999
Q ss_pred CccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----ccccccc
Q 000753 930 GYPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVG 1000 (1302)
Q Consensus 930 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g 1000 (1302)
|.+... ..+++.++|++|++.+++. |++||+.+...... ....+..++.++++++.+++.+ ..+..
T Consensus 91 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-- 165 (272)
T PRK14236 91 GQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHEN-- 165 (272)
T ss_pred CEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhCC--
Confidence 987642 2346789999999988886 99999987643321 1112233456788899988853 22332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEE
Q 000753 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1302)
Q Consensus 1001 ~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l 1080 (1302)
+..||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++++ +.|||++||+++ ++.+.||++++|
T Consensus 166 ---~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 240 (272)
T PRK14236 166 ---AFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFM 240 (272)
T ss_pred ---cccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEE
Confidence 457999999999999999999999999999999999999999999999975 799999999986 566789999999
Q ss_pred ecCcEEEEecCC
Q 000753 1081 KRGGRVIYAGPL 1092 (1302)
Q Consensus 1081 ~~gG~~~~~g~~ 1092 (1302)
++ |+++..|+.
T Consensus 241 ~~-G~i~~~g~~ 251 (272)
T PRK14236 241 YM-GKLVEYGDT 251 (272)
T ss_pred EC-CEEEecCCH
Confidence 85 789988874
No 366
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.4e-35 Score=326.31 Aligned_cols=251 Identities=24% Similarity=0.394 Sum_probs=200.4
Q ss_pred HHHhhhhhcHHHHHHHHHHHhhhc------CCCCCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCC
Q 000753 106 SILKIVEEDNEKFLKRIRHRTDRV------GIEIPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPS 179 (1302)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~r~~~~------g~~~p~i~v~~~~l~v~~~~~~~~~~~pt~~n~~~~~~~~~~~~~~~~~~ 179 (1302)
|.++..=-|.|++++-+++..+-+ .+..++-.|.|+|++..-
T Consensus 500 R~iQ~nfiDmEnmfdllkee~eVvd~P~a~pl~~~~G~i~fsnvtF~Y-------------------------------- 547 (790)
T KOG0056|consen 500 RSIQKNFIDMENMFDLLKEEPEVVDLPGAPPLKVTQGKIEFSNVTFAY-------------------------------- 547 (790)
T ss_pred HHHHHhhhhHHHHHHHhhcCchhhcCCCCCCccccCCeEEEEEeEEec--------------------------------
Confidence 334444458888888877665532 234455678888877642
Q ss_pred CcccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC---CccceEEEEccCCCC
Q 000753 180 KKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF---VPQRTCAYISQHDLH 256 (1302)
Q Consensus 180 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~---~~~~~~~yv~Q~d~~ 256 (1302)
.+.+++|+||||++.||+.+|++||||+||||+|++|-...+-+ +|.|+++|+++... ..|+.||.|||+..+
T Consensus 548 -~p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvL 623 (790)
T KOG0056|consen 548 -DPGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQDTVL 623 (790)
T ss_pred -CCCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCccee
Confidence 23467999999999999999999999999999999999999876 99999999998654 346789999999999
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccccccccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 336 (1302)
|.+ |+-.||.|+.. +...++...|+.. ....| +++++++.++|.||
T Consensus 624 FNd-TI~yNIryak~-------------------------~AsneevyaAAkA-----A~IHd---rIl~fPegY~t~VG 669 (790)
T KOG0056|consen 624 FND-TILYNIRYAKP-------------------------SASNEEVYAAAKA-----AQIHD---RILQFPEGYNTRVG 669 (790)
T ss_pred ecc-eeeeheeecCC-------------------------CCChHHHHHHHHH-----hhHHH---HHhcCchhhhhhhh
Confidence 975 99999988622 1112222222211 11233 46789999999999
Q ss_pred CccCCC--CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeE
Q 000753 337 DEMRRG--ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1302)
Q Consensus 337 ~~~~rG--LSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~i 414 (1302)
+ || |||||||||+|||+++..|.+++|||.||+||..+.++|..+|.+++. ++|.|+.-|.- .+.-.+|.|
T Consensus 670 E---RGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvAHRL--STivnAD~I 742 (790)
T KOG0056|consen 670 E---RGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVAHRL--STIVNADLI 742 (790)
T ss_pred h---cccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEeeee--hheecccEE
Confidence 8 66 799999999999999999999999999999999999999999999986 56777666654 466789999
Q ss_pred EEecCCeEEEEcChhHHHH
Q 000753 415 ILLSEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 415 ilL~~G~iv~~G~~~~~~~ 433 (1302)
+++++|+|++.|.++|++.
T Consensus 743 Lvi~~G~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 743 LVISNGRIVERGRHEELLK 761 (790)
T ss_pred EEEeCCeEeecCcHHHHHh
Confidence 9999999999999999875
No 367
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4.6e-34 Score=322.74 Aligned_cols=205 Identities=23% Similarity=0.307 Sum_probs=170.0
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC----------------CccceE
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF----------------VPQRTC 247 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~----------------~~~~~~ 247 (1302)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 45999999999999999999999999999999999999886 99999999876421 124679
Q ss_pred EEEccCCCCCCCCCHHHHHHhhhh-ccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcC
Q 000753 248 AYISQHDLHHGEMTVRETLDFSGR-CLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILG 326 (1302)
Q Consensus 248 ~yv~Q~d~~~~~lTVrE~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg 326 (1302)
+|++|++.+++.+||+||+.++.. ..... . . +....+..+++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------~----------~--------------~~~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGLS----------K----------Q--------------EARERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCCC----------H----------H--------------HHHHHHHHHHHHcC
Confidence 999999999999999999987431 11000 0 0 01123456788999
Q ss_pred Ccccc-cccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCch
Q 000753 327 LDICA-DTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAP 405 (1302)
Q Consensus 327 L~~~~-dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~ 405 (1302)
|.+.. +..+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|++ .
T Consensus 141 l~~~~~~~~~~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~-g~tiiivsH~~-~ 213 (257)
T PRK10619 141 IDERAQGKYPVH-----LSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEE-GKTMVVVTHEM-G 213 (257)
T ss_pred CChhhhhCCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhc-CCEEEEEeCCH-H
Confidence 98753 665554 9999999999999999999999999999999999999999999998763 78888887765 4
Q ss_pred hHHhhcCeEEEecCCeEEEEcChhHHH
Q 000753 406 ETYDLFDDIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 406 e~~~~~D~iilL~~G~iv~~G~~~~~~ 432 (1302)
++..+||+|++|++|++++.|+++++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 777899999999999999999988764
No 368
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=8.8e-35 Score=366.85 Aligned_cols=210 Identities=24% Similarity=0.405 Sum_probs=175.2
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1302)
..++|+|+++.+. +++.+|+|+|++|+||+++||+||||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 4689999986432 1246999999999999999999999999999999999976 3 37999999987
Q ss_pred CC---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000753 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1302)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1302)
+. .+.+++.++||+|++.++.. |++||+.++. .+.++ +.++++++..++.+. .|+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~~-TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPHG-TLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCCc-CHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 64 45678899999999998864 9999998752 12332 346777777776543 35566654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
..+||||||||++|||||+++|+||+||||||+||+.+++.|++.|+++. +++|+|++||+++ ....+|++++|++
T Consensus 483 -G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 -AAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 35699999999999999999999999999999999999999999999885 5899999999974 5678999999985
Q ss_pred CcEEEEecCC
Q 000753 1083 GGRVIYAGPL 1092 (1302)
Q Consensus 1083 gG~~~~~g~~ 1092 (1302)
|++++.|+.
T Consensus 559 -G~i~e~G~~ 567 (588)
T PRK11174 559 -GQIVQQGDY 567 (588)
T ss_pred -CeEeecCCH
Confidence 899999984
No 369
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.1e-32 Score=345.00 Aligned_cols=213 Identities=23% Similarity=0.329 Sum_probs=177.3
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1302)
..++++|++|.++. +.+.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEE
Confidence 46999999987741 124699999999999999999999999999999999997663 47999999987
Q ss_pred CC---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000753 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1302)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1302)
.+ ...+++.++||||++.+++ -|++||+.++. +.+.+ ++.++++++.+++.+. .|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYS----REQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCC----HHHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 64 3567788999999999886 69999997642 11122 2346777887776543 35556654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|||++||+++ ....||++++|++
T Consensus 478 -g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~ 553 (582)
T PRK11176 478 -GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED 553 (582)
T ss_pred -CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999875 4799999999974 6678999999985
Q ss_pred CcEEEEecCC
Q 000753 1083 GGRVIYAGPL 1092 (1302)
Q Consensus 1083 gG~~~~~g~~ 1092 (1302)
|++++.|+.
T Consensus 554 -g~i~e~g~~ 562 (582)
T PRK11176 554 -GEIVERGTH 562 (582)
T ss_pred -CEEEEeCCH
Confidence 899999984
No 370
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-34 Score=315.82 Aligned_cols=206 Identities=27% Similarity=0.342 Sum_probs=175.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC-ccceEEEEccCCCCCCCCCH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-PQRTCAYISQHDLHHGEMTV 262 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV 262 (1302)
+++|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|+++|+++.+.. .++.++|++|++..++.+|+
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 36999999999999999999999999999999999999987 899999999876532 24679999999999999999
Q ss_pred HHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCC
Q 000753 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1302)
Q Consensus 263 rE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1302)
+||+.+.....+.. +. .....++.+++.+||++..++.+.+
T Consensus 90 ~~nl~~~~~~~~~~---------------------~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (232)
T cd03300 90 FENIAFGLRLKKLP---------------------KA-------------EIKERVAEALDLVQLEGYANRKPSQ----- 130 (232)
T ss_pred HHHHHHHHHhcCCC---------------------HH-------------HHHHHHHHHHHHcCCchhhcCChhh-----
Confidence 99998764322110 00 0011346688999999888887765
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeE
Q 000753 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1302)
Q Consensus 343 LSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~i 422 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++...+.|++++.|++ .++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~-~~~~~~~d~i~~l~~G~~ 209 (232)
T cd03300 131 LSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQ-EEALTMSDRIAVMNKGKI 209 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998765578988888776 467889999999999999
Q ss_pred EEEcChhHHH
Q 000753 423 VYQGPRDNVL 432 (1302)
Q Consensus 423 v~~G~~~~~~ 432 (1302)
+++|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (232)
T cd03300 210 QQIGTPEEIY 219 (232)
T ss_pred EecCCHHHHH
Confidence 9999887664
No 371
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.7e-34 Score=314.44 Aligned_cols=201 Identities=23% Similarity=0.308 Sum_probs=170.2
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++ ++.+|+++|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEc
Confidence 477888876442 3469999999999999999999999999999999999765 3479999999876
Q ss_pred ChhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000753 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1302)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1302)
.....++.++|++|++.+++.+|+.||+.+...++. . ...+.++++++.++|.+..+..+ ..||+||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~---~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---R---RAKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---C---cHHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543344569999999989998999999987654321 1 12234678899999987777663 479999999
Q ss_pred HHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1014 Rl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
|++|||+++.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|+++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999999998888999999999986 6778999999886
No 372
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=356.31 Aligned_cols=219 Identities=26% Similarity=0.327 Sum_probs=180.8
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.+ +++.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSF-------------GPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEc-------------CCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEEC
Confidence 36778877654 23469999999999999999999999999999999999765 3479999999876
Q ss_pred Chh----hhcceeEEeccCCCCCCCCCHHHHHHHHHHhh----CCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000753 934 NQE----TFARVSGYCEQNDIHSPYVTVYESLLYSAWLR----LSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1302)
Q Consensus 934 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1302)
... ..++.+||++|++.+++.+||+||+.+..... .......++..+.+.++++.++|.+..++.+ .
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 421 12356999999999999999999998753211 0000122334456889999999988777764 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000753 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1302)
Q Consensus 1006 ~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~ 1085 (1302)
+||||||||++||++|+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ .+...||++++|++ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999878999999999976 56678999999985 78
Q ss_pred EEEecCCCc
Q 000753 1086 VIYAGPLGH 1094 (1302)
Q Consensus 1086 ~~~~g~~~~ 1094 (1302)
+++.|+..+
T Consensus 223 i~~~g~~~~ 231 (510)
T PRK09700 223 SVCSGMVSD 231 (510)
T ss_pred Eeeecchhh
Confidence 999988754
No 373
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-34 Score=323.00 Aligned_cols=215 Identities=20% Similarity=0.273 Sum_probs=172.9
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCC--C-ceeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i~g 930 (1302)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 478888887552 2469999999999999999999999999999999999532 1 13479999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1302)
.+... ...++.++|++|++.+++. |++||+.+...... .......++.+.++++.+++.+ ..++.
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87632 2345679999999988875 99999987643221 1112223455778888888852 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.||++++|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999986 5677899999998
Q ss_pred cCcEEEEecCC
Q 000753 1082 RGGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1302)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 5 789998874
No 374
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-34 Score=325.08 Aligned_cols=204 Identities=21% Similarity=0.328 Sum_probs=168.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC-------ccceEEEEccCC--
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-------PQRTCAYISQHD-- 254 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d-- 254 (1302)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35999999999999999999999999999999999999887 999999998875421 245799999996
Q ss_pred CCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc-cccc
Q 000753 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI-CADT 333 (1302)
Q Consensus 255 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt 333 (1302)
.+++ .||+||+.|.....+.. . .+ ....++.+++.+||.. ..++
T Consensus 97 ~~~~-~tv~e~l~~~~~~~~~~----------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~ 141 (280)
T PRK13649 97 QLFE-ETVLKDVAFGPQNFGVS----------Q----------EE--------------AEALAREKLALVGISESLFEK 141 (280)
T ss_pred hhcc-ccHHHHHHHHHHHcCCC----------H----------HH--------------HHHHHHHHHHHcCCChhhhhC
Confidence 3454 69999998754321100 0 00 0112456788899974 5677
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCe
Q 000753 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1302)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ 413 (1302)
.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|++ .++.+++|+
T Consensus 142 ~~~~-----LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~tiiivsH~~-~~~~~~~d~ 214 (280)
T PRK13649 142 NPFE-----LSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQS-GMTIVLVTHLM-DDVANYADF 214 (280)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHC-CCEEEEEeccH-HHHHHhCCE
Confidence 7765 9999999999999999999999999999999999999999999998763 78888887775 477789999
Q ss_pred EEEecCCeEEEEcChhHHH
Q 000753 414 IILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1302)
+++|++|++++.|+.+++.
T Consensus 215 i~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 215 VYVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999988764
No 375
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-34 Score=323.85 Aligned_cols=205 Identities=28% Similarity=0.388 Sum_probs=170.2
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC-----CccceEEEEccCCC-CC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-----VPQRTCAYISQHDL-HH 257 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~-~~ 257 (1302)
+++|+|+|++|++||+++|+||||||||||+++|+|.++++ +|+|.++|+++... ..++.++|++|++. .+
T Consensus 15 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (275)
T PRK13639 15 TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQL 91 (275)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhh
Confidence 35899999999999999999999999999999999999887 99999999987421 12467999999963 33
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
..+||+||+.|+....+.. +. +....+..+++.+||++..++.+++
T Consensus 92 ~~~tv~e~i~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~L~~~~~~~~~~ 137 (275)
T PRK13639 92 FAPTVEEDVAFGPLNLGLS----------KE------------------------EVEKRVKEALKAVGMEGFENKPPHH 137 (275)
T ss_pred ccccHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHCCCchhhcCChhh
Confidence 3579999998753211100 00 0011345688999999888888876
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|++++.|++ .++.++||++++|
T Consensus 138 -----LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~~til~vtH~~-~~~~~~~d~i~~l 210 (275)
T PRK13639 138 -----LSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKE-GITIIISTHDV-DLVPVYADKVYVM 210 (275)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEEecCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998764 77888877664 5777899999999
Q ss_pred cCCeEEEEcChhHHH
Q 000753 418 SEGQIVYQGPRDNVL 432 (1302)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1302)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (275)
T PRK13639 211 SDGKIIKEGTPKEVF 225 (275)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999998875
No 376
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-34 Score=317.90 Aligned_cols=200 Identities=24% Similarity=0.370 Sum_probs=168.1
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCCCCCCCC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 261 (1302)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 5899999999999999999999999999999999999887 999999998875432 2467999999988886 69
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc-ccccccccCccC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTMVGDEMR 340 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~~ 340 (1302)
|+||+.+.....+ . ....++.+++.+||+ +..++.+.+
T Consensus 93 v~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~~--- 131 (241)
T PRK14250 93 VKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATRDVKN--- 131 (241)
T ss_pred HHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhCCccc---
Confidence 9999977432110 0 001235578889996 456666655
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|++|
T Consensus 132 --LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~-~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 132 --LSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNM-EQAKRIGDYTAFLNKG 208 (241)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccH-HHHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999999998765578888877665 4778899999999999
Q ss_pred eEEEEcChhHHH
Q 000753 421 QIVYQGPRDNVL 432 (1302)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1302)
+++..|+++++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999988763
No 377
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=318.07 Aligned_cols=206 Identities=22% Similarity=0.315 Sum_probs=163.8
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCccceEEECCcccCCC-----CccceEEEEccCCCCC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1302)
++|+|+|+++++|++++|+|||||||||||++|+|..+ +....+|+|.++|+++... ..++.++|++|++.++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 99 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPF 99 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCC
Confidence 58999999999999999999999999999999999864 1001389999999887531 1246799999999888
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc----cccc
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CADT 333 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 333 (1302)
+ .||+||+.|+....+.... .+ ....++..++.+||.+ ..+.
T Consensus 100 ~-~tv~enl~~~~~~~~~~~~-------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 145 (253)
T PRK14242 100 P-KSIFENVAYGLRVNGVKDK-------------------AY--------------LAERVERSLRHAALWDEVKDRLHE 145 (253)
T ss_pred c-CcHHHHHHHHHHHcCCCCH-------------------HH--------------HHHHHHHHHHHcCCchhhhHHhhC
Confidence 7 5999999886432211000 00 0112345677788754 2344
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCe
Q 000753 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1302)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ 413 (1302)
.++ .|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++|+
T Consensus 146 ~~~-----~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tvii~tH~~-~~~~~~~d~ 217 (253)
T PRK14242 146 SAL-----GLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA--RYTIIIVTHNM-QQAARVSDV 217 (253)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--CCeEEEEEecH-HHHHHhCCE
Confidence 444 4999999999999999999999999999999999999999999999854 57888877765 477889999
Q ss_pred EEEecCCeEEEEcChhHHH
Q 000753 414 IILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1302)
|++|++|+++..|+.+++.
T Consensus 218 v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 218 TAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999987763
No 378
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-34 Score=321.29 Aligned_cols=206 Identities=20% Similarity=0.310 Sum_probs=166.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCccceEEECCcccCCC-----CccceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1302)
+++|+|+|++|++|++++|+|||||||||||++|+|.+++. ...+|+|.++|+++... ..++.++|++|++.+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 104 (258)
T PRK14268 25 KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNP 104 (258)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCcc
Confidence 35899999999999999999999999999999999998741 01389999999886432 124579999999888
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc----cccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 332 (1302)
++ +||+||+.|..+..+.. .. + ....++.+++.+|+. +..+
T Consensus 105 ~~-~tv~enl~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~ 149 (258)
T PRK14268 105 FP-MSIYDNVAYGPRIHGAN----------KK----------D--------------LDGVVENALRSAALWDETSDRLK 149 (258)
T ss_pred Cc-ccHHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCCCcchhhhhc
Confidence 87 89999998864322110 00 0 011245678888874 3456
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 150 ~~~~~-----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~~tiiivsH~~-~~~~~~~d 221 (258)
T PRK14268 150 SPALS-----LSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK--DYTIVIVTHNM-QQAARISD 221 (258)
T ss_pred CChhh-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh--CCEEEEEECCH-HHHHHhCC
Confidence 66655 999999999999999999999999999999999999999999999864 67888877765 47778999
Q ss_pred eEEEecCCeEEEEcChhHHH
Q 000753 413 DIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1302)
+|++|++|++++.|+++++.
T Consensus 222 ~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 222 YTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
No 379
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.5e-34 Score=312.31 Aligned_cols=187 Identities=24% Similarity=0.289 Sum_probs=156.3
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh--hhhcceeEEeccCCCCCCCCCH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1302)
+.+|+|||++|++||++||+|+||||||||+++|+|..+ +..|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 14 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~tv 91 (204)
T PRK13538 14 RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIRRQRDEYHQDLLYLGHQPGIKTELTA 91 (204)
T ss_pred EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcccchHHhhhheEEeCCccccCcCCcH
Confidence 469999999999999999999999999999999999765 347999999987532 3345679999999999999999
Q ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 000753 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1302)
Q Consensus 958 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgL 1037 (1302)
.||+.+....+. . ...+.++++++.++|.+..++. +..||||||||++||+||+.+|++|+|||||+||
T Consensus 92 ~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt~~L 160 (204)
T PRK13538 92 LENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQRRVALARLWLTRAPLWILDEPFTAI 160 (204)
T ss_pred HHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCccC
Confidence 999988654321 1 1234578999999998777665 4579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEE
Q 000753 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1302)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l 1080 (1302)
|+.++..+++.|++++++|+|||++||+++ .+...-++++.+
T Consensus 161 D~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 161 DKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 999999999999998777899999999975 343433444433
No 380
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-34 Score=324.22 Aligned_cols=215 Identities=22% Similarity=0.320 Sum_probs=173.2
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCC--C-ceeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i~g 930 (1302)
.+.++|+++.++ ...+|+|+|++|++||+++|+||||||||||+++|+|... + .+..|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 578888887552 2359999999999999999999999999999999999632 1 02479999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK----SLNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~~g~ 1001 (1302)
.++.. ...++.++|++|++.+++. ||.||+.+....+.. .......+.+.++++.+++. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 2345679999999988875 999999886533211 11223345677888888874 233333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.||++++|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999986 5667899999998
Q ss_pred cCcEEEEecCC
Q 000753 1082 RGGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1302)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 5 789988875
No 381
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.1e-34 Score=359.30 Aligned_cols=206 Identities=23% Similarity=0.318 Sum_probs=171.7
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCCCCCC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1302)
++|+|+|++++||+.++|+|+||||||||+++|+|+++|+ +|+|.+||+++++... ++.++||+|++.+|+. |
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-T 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-h
Confidence 5899999999999999999999999999999999999997 9999999999876643 5789999999999986 9
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
++|||.++.. . .+.++.+..+. .+ .+..++ .|++..||.+|+ .+.
T Consensus 431 i~~NI~~~~~---~--------------------~d~~i~~a~~~---~g------l~~~i~--~lp~Gldt~i~e-~g~ 475 (592)
T PRK10790 431 FLANVTLGRD---I--------------------SEEQVWQALET---VQ------LAELAR--SLPDGLYTPLGE-QGN 475 (592)
T ss_pred HHHHHHhCCC---C--------------------CHHHHHHHHHH---cC------cHHHHH--hccccccccccC-CCC
Confidence 9999988521 0 01111111111 11 111222 267788999986 456
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
.||||||||++|||||+.+|+|++||||||+||+.+...|.+.|+++.. ++|+|++.|++ +....+|+|++|++|+
T Consensus 476 ~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~--~~tvIivtHr~--~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 476 NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE--HTTLVVIAHRL--STIVEADTILVLHRGQ 551 (592)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEecch--HHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998764 68999988887 5677899999999999
Q ss_pred EEEEcChhHHHH
Q 000753 422 IVYQGPRDNVLE 433 (1302)
Q Consensus 422 iv~~G~~~~~~~ 433 (1302)
++.+|+++++.+
T Consensus 552 i~~~G~~~~L~~ 563 (592)
T PRK10790 552 AVEQGTHQQLLA 563 (592)
T ss_pred EEEEcCHHHHHh
Confidence 999999999864
No 382
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=7.8e-34 Score=315.24 Aligned_cols=198 Identities=24% Similarity=0.349 Sum_probs=166.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-------cceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 256 (1302)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+
T Consensus 23 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l 99 (228)
T PRK10584 23 LSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFML 99 (228)
T ss_pred eEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEccccc
Confidence 35999999999999999999999999999999999999887 9999999998765322 2479999999999
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccccccccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 336 (1302)
++.+||.||+.+.....+.. .. +....++.+++.+||.+..++.++
T Consensus 100 ~~~~tv~~~l~~~~~~~~~~--------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~ 145 (228)
T PRK10584 100 IPTLNALENVELPALLRGES--------------------SR--------------QSRNGAKALLEQLGLGKRLDHLPA 145 (228)
T ss_pred CCCcCHHHHHHHHHHhcCCC--------------------HH--------------HHHHHHHHHHHHcCCHhHhhCChh
Confidence 99999999998753221100 00 011234668899999888888877
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEE
Q 000753 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1302)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iil 416 (1302)
+ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++ +.+|++++
T Consensus 146 ~-----LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~ 218 (228)
T PRK10584 146 Q-----LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLR 218 (228)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEE
Confidence 6 99999999999999999999999999999999999999999999987655788888888765 45 56999999
Q ss_pred ecCCeEEEE
Q 000753 417 LSEGQIVYQ 425 (1302)
Q Consensus 417 L~~G~iv~~ 425 (1302)
|++|+++++
T Consensus 219 l~~g~i~~~ 227 (228)
T PRK10584 219 LVNGQLQEE 227 (228)
T ss_pred EECCEEEec
Confidence 999999753
No 383
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=4.8e-34 Score=315.02 Aligned_cols=211 Identities=25% Similarity=0.409 Sum_probs=173.6
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
++++|+++.+.. +.+.+.+|+|+||++++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~---------~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGH---------GSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccC---------CCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 466777765421 0112569999999999999999999999999999999999765 35799999998763
Q ss_pred h------hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000753 935 Q------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1302)
Q Consensus 935 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1302)
. ...++.++|++|++.+++.+|+.||+.+...... ....++..+.+.++++.++|.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYY-----PHNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCC
Confidence 2 1345779999999999999999999988654321 123344456789999999998777766 35799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEE
Q 000753 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1302)
Q Consensus 1009 gGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~ 1086 (1302)
+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ..+.||++++|.+ |++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999875 5899999999975 5578999999985 554
No 384
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-34 Score=319.45 Aligned_cols=215 Identities=21% Similarity=0.281 Sum_probs=172.5
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc---eeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1302)
.+.++|+++.+. ++.+|+|+|++|++|+++||+||||||||||+++|+|...+. +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 356777776542 246999999999999999999999999999999999975421 2359999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1302)
.+... ..+++.++|++|++.+++. |++||+.+....+.. ...+...+.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 144 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLHKS--- 144 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhhCC---
Confidence 87532 2346789999999988875 999999886543211 112223345777888888753 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||++||+++ ++.+.||++++|.
T Consensus 145 --~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14249 145 --GLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEe
Confidence 45799999999999999999999999999999999999999999999985 5899999999986 5677899999998
Q ss_pred cCcEEEEecCC
Q 000753 1082 RGGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1302)
+ |++++.|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14249 221 T-GDLVEYGRT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 5 788888875
No 385
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-34 Score=320.15 Aligned_cols=204 Identities=25% Similarity=0.326 Sum_probs=169.6
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCC------C---CccceEEEEccCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNE------F---VPQRTCAYISQHD 254 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~------~---~~~~~~~yv~Q~d 254 (1302)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++
T Consensus 15 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~ 91 (242)
T PRK11124 15 HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQY 91 (242)
T ss_pred eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCc
Confidence 35999999999999999999999999999999999999887 9999999987631 0 1245799999999
Q ss_pred CCCCCCCHHHHHHhhh-hccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccc
Q 000753 255 LHHGEMTVRETLDFSG-RCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADT 333 (1302)
Q Consensus 255 ~~~~~lTVrE~l~f~~-~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 333 (1302)
.+++.+||+||+.+.. ...+.. ..+ ....++.+++.+||++..++
T Consensus 92 ~~~~~~tv~e~i~~~~~~~~~~~--------------------~~~--------------~~~~~~~~l~~~gl~~~~~~ 137 (242)
T PRK11124 92 NLWPHLTVQQNLIEAPCRVLGLS--------------------KDQ--------------ALARAEKLLERLRLKPYADR 137 (242)
T ss_pred cccCCCcHHHHHHHHHHHHcCCC--------------------HHH--------------HHHHHHHHHHHcCChhhhhC
Confidence 9999999999997531 111100 000 01134667889999887888
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCe
Q 000753 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1302)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ 413 (1302)
.+++ |||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ .+.|++++.|++ .++.+++|+
T Consensus 138 ~~~~-----LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~sh~~-~~~~~~~d~ 210 (242)
T PRK11124 138 FPLH-----LSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-TGITQVIVTHEV-EVARKTASR 210 (242)
T ss_pred Chhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-cCCEEEEEeCCH-HHHHHhcCE
Confidence 7765 999999999999999999999999999999999999999999999865 377888877766 477788999
Q ss_pred EEEecCCeEEEEcChhHH
Q 000753 414 IILLSEGQIVYQGPRDNV 431 (1302)
Q Consensus 414 iilL~~G~iv~~G~~~~~ 431 (1302)
+++|.+|+++++|+.+++
T Consensus 211 i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 211 VVYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEEECCEEEEeCCHHHh
Confidence 999999999999998764
No 386
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-34 Score=315.69 Aligned_cols=204 Identities=26% Similarity=0.404 Sum_probs=174.0
Q ss_pred EeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC-ccceEEEEccCCCCCCCCCHHH
Q 000753 186 ILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-PQRTCAYISQHDLHHGEMTVRE 264 (1302)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTVrE 264 (1302)
+|+|+|++|+||++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999887 999999999876532 2467999999999999999999
Q ss_pred HHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCC
Q 000753 265 TLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGIS 344 (1302)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLS 344 (1302)
|+.++....+.. ..+ ....+...++.+||.+..++.+.+ ||
T Consensus 91 ~l~~~~~~~~~~--------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS 131 (235)
T cd03299 91 NIAYGLKKRKVD--------------------KKE--------------IERKVLEIAEMLGIDHLLNRKPET-----LS 131 (235)
T ss_pred HHHHHHHHcCCC--------------------HHH--------------HHHHHHHHHHHcCChhHHhcCccc-----CC
Confidence 998753221100 000 011245678899998888888876 99
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEEE
Q 000753 345 GGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVY 424 (1302)
Q Consensus 345 GGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv~ 424 (1302)
|||||||+||+|++.+|++++|||||+|||+.++..+.+.|++++...+.|++++.|++ .++.+++|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~-~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDF-EEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998765578888888776 56788999999999999999
Q ss_pred EcChhHHH
Q 000753 425 QGPRDNVL 432 (1302)
Q Consensus 425 ~G~~~~~~ 432 (1302)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987764
No 387
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-34 Score=312.32 Aligned_cols=195 Identities=23% Similarity=0.346 Sum_probs=164.3
Q ss_pred ceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC-ccceEEEEccCCCCCCCCCHHHHHH
Q 000753 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-PQRTCAYISQHDLHHGEMTVRETLD 267 (1302)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTVrE~l~ 267 (1302)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999887 999999999875433 2467999999999999999999998
Q ss_pred hhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCChHH
Q 000753 268 FSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQ 347 (1302)
Q Consensus 268 f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGq 347 (1302)
++....... .. +.+..++.+++.+||++..++.+.+ |||||
T Consensus 93 ~~~~~~~~~--------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~ 133 (211)
T cd03298 93 LGLSPGLKL--------------------TA--------------EDRQAIEVALARVGLAGLEKRLPGE-----LSGGE 133 (211)
T ss_pred cccccccCc--------------------cH--------------HHHHHHHHHHHHcCCHHHHhCCccc-----CCHHH
Confidence 753211000 00 0012346688999998888888765 99999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEEEEc
Q 000753 348 KKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQG 426 (1302)
Q Consensus 348 kqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv~~G 426 (1302)
|||++||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++ .++.+++|++++|++|+++..|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQP-EDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999999999999998765577888876655 5777899999999999998764
No 388
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-34 Score=320.58 Aligned_cols=216 Identities=23% Similarity=0.293 Sum_probs=173.0
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCce---eEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---IEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~---~~G~i~i~g 930 (1302)
.+.++|+++.++ ++.+|+||||+|++||++||+|+||||||||+++|+|...+.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 466777776542 3469999999999999999999999999999999999754221 379999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1302)
.++.. ..+++.++|++|++.+++.+|+.||+.+...... ....++..+.+.++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87532 2345679999999999999999999987543221 1112333455667777776642 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ .+.+.||++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999986 5667899999998
Q ss_pred cCcEEEEecCC
Q 000753 1082 RGGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1302)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 789988875
No 389
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.6e-35 Score=290.05 Aligned_cols=208 Identities=22% Similarity=0.321 Sum_probs=176.7
Q ss_pred cccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC-------------h---hhh
Q 000753 875 VGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN-------------Q---ETF 938 (1302)
Q Consensus 875 ~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~-------------~---~~~ 938 (1302)
+.++...+|++||++.+.|+++.|+|.|||||||+|+||.-..+ +..|.|.++|..+. . ..+
T Consensus 14 K~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~ 91 (256)
T COG4598 14 KRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADKRQLQRL 91 (256)
T ss_pred hhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCHHHHHHH
Confidence 34567889999999999999999999999999999999987655 45799999986431 1 224
Q ss_pred cceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHH
Q 000753 939 ARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIA 1018 (1302)
Q Consensus 939 ~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA 1018 (1302)
|...|+|+|+..++..+||.||+.-.-.-- ...++.+..++.+..|..+|+.+.++.+. ..|||||+||++||
T Consensus 92 Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhV--Lg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----~~LSGGQQQR~aIA 164 (256)
T COG4598 92 RTRLGMVFQHFNLWSHMTVLENVIEAPVHV--LGVSKAEAIERAEKYLAKVGIAEKADAYP-----AHLSGGQQQRVAIA 164 (256)
T ss_pred HHHhhHhhhhcchhHHHHHHHHHHhcchHh--hcCCHHHHHHHHHHHHHHhCchhhhhcCc-----cccCchHHHHHHHH
Confidence 456899999999999999999997542211 13456667778899999999999988774 47999999999999
Q ss_pred HHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1019 VELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1019 ~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
|||+.+|+++++|||||.|||+-.-.+.+.+++++++|+|.+++||.+.. ..+...+++.|.+ |.+.+.||+.
T Consensus 165 RaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh~-G~iEE~G~P~ 237 (256)
T COG4598 165 RALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLHQ-GKIEEEGPPE 237 (256)
T ss_pred HHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEeec-ceecccCChH
Confidence 99999999999999999999999999999999999999999999998753 4456788999985 8999999974
No 390
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-34 Score=319.42 Aligned_cols=215 Identities=25% Similarity=0.335 Sum_probs=172.8
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCC--Cc-eeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~g-~~~G~i~i~g 930 (1302)
.+.++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|... +. +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 367888876552 2469999999999999999999999999999999999753 11 2479999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1302)
.+... ...++.++|++|++.+++ .||+||+.+....+.. ...+...+.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAGV--KDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87532 234567999999998876 7999999876433211 112223455788899998842 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999986 5677899999998
Q ss_pred cCcEEEEecCC
Q 000753 1082 RGGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1302)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 5 788888874
No 391
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=325.14 Aligned_cols=219 Identities=23% Similarity=0.393 Sum_probs=173.1
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.++ +++.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 477888876552 12469999999999999999999999999999999999765 3579999999876
Q ss_pred ChhhhcceeEEeccCCCCC--CCCCHHHHHHHHHHhhCC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000753 934 NQETFARVSGYCEQNDIHS--PYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1302)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~--~~lTv~E~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1302)
.....++.++|++|++.+. ...+++|++.+....... .........+.++++++.++|.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4332234699999997653 234788888653211000 01111223445788999999988777764 479999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1011 qrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999986 567789998666 4 8999988
Q ss_pred CCCc
Q 000753 1091 PLGH 1094 (1302)
Q Consensus 1091 ~~~~ 1094 (1302)
+..+
T Consensus 224 ~~~~ 227 (272)
T PRK15056 224 PTET 227 (272)
T ss_pred CHHh
Confidence 8643
No 392
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5.2e-34 Score=312.85 Aligned_cols=194 Identities=29% Similarity=0.429 Sum_probs=161.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCC-CCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDL-HHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 259 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 46999999999999999999999999999999999999887 999999998875432 2467999999974 4667
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
+||+||+.++....+.. . .+ ....++.+++.+||++..++.+++
T Consensus 91 ~t~~~~l~~~~~~~~~~----------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~-- 134 (211)
T cd03225 91 PTVEEEVAFGLENLGLP----------E----------EE--------------IEERVEEALELVGLEGLRDRSPFT-- 134 (211)
T ss_pred CcHHHHHHHHHHHcCCC----------H----------HH--------------HHHHHHHHHHHcCcHhhhcCCccc--
Confidence 89999998754321100 0 00 011245678899998877887766
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|++ .++..++|+|++|++
T Consensus 135 ---LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~tvi~~sH~~-~~~~~~~d~i~~l~~ 209 (211)
T cd03225 135 ---LSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE-GKTIIIVTHDL-DLLLELADRVIVLED 209 (211)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc-CCEEEEEeCCH-HHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999999999999999999998764 77888887765 577888999999999
Q ss_pred Ce
Q 000753 420 GQ 421 (1302)
Q Consensus 420 G~ 421 (1302)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 393
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-34 Score=319.67 Aligned_cols=215 Identities=25% Similarity=0.290 Sum_probs=173.7
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCc---eeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1302)
.+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..... ..+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 467888876542 346999999999999999999999999999999999964311 1379999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1302)
.++.. ...++.++|++|++.+++. ||+||+.+....+.. ......++.+.++++.+++.+ ..+..
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 146 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLHDS--- 146 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhhcC---
Confidence 87532 2345679999999988875 999999987543321 122333456788888888743 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~ 222 (253)
T PRK14261 147 --ALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999875 699999999975 4667899999998
Q ss_pred cCcEEEEecCC
Q 000753 1082 RGGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1302)
+ |+++..|+.
T Consensus 223 ~-G~i~~~g~~ 232 (253)
T PRK14261 223 L-GKLIEFDKT 232 (253)
T ss_pred C-CEEEEcCCH
Confidence 5 789888875
No 394
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-34 Score=321.64 Aligned_cols=210 Identities=22% Similarity=0.327 Sum_probs=173.1
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 260 (1302)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+
T Consensus 24 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 24 RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 36999999999999999999999999999999999999886 999999998765432 235799999998888899
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
||.||+.++..... + .. +. .... ....++.+++.+||++..++.+++
T Consensus 101 tv~e~l~~~~~~~~-~-~~-------------~~-~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~--- 147 (265)
T PRK10575 101 TVRELVAIGRYPWH-G-AL-------------GR-FGAA--------------DREKVEEAISLVGLKPLAHRLVDS--- 147 (265)
T ss_pred cHHHHHHhCccccc-c-cc-------------cC-CCHH--------------HHHHHHHHHHHcCCHHHhcCCccc---
Confidence 99999987532100 0 00 00 0000 011346688899998878888876
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|++|
T Consensus 148 --LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~-~~i~~~~d~i~~l~~G 224 (265)
T PRK10575 148 --LSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDI-NMAARYCDYLVALRGG 224 (265)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999998765577888887765 4788999999999999
Q ss_pred eEEEEcChhHHH
Q 000753 421 QIVYQGPRDNVL 432 (1302)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1302)
+++..|+.+++.
T Consensus 225 ~i~~~~~~~~~~ 236 (265)
T PRK10575 225 EMIAQGTPAELM 236 (265)
T ss_pred eEEEecCHHHhc
Confidence 999999987753
No 395
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=5.4e-34 Score=313.11 Aligned_cols=200 Identities=29% Similarity=0.431 Sum_probs=162.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCC--CCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHH--GEMT 261 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 261 (1302)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+. ..+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEeccccccccCCCCc
Confidence 46999999999999999999999999999999999999887 9999999987642 356799999998663 3479
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
|+||+.+....... .+.. ... .....++.+++.+||++..++.+++
T Consensus 87 v~e~l~~~~~~~~~--~~~~--------------~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~---- 132 (213)
T cd03235 87 VRDVVLMGLYGHKG--LFRR--------------LSK--------------ADKAKVDEALERVGLSELADRQIGE---- 132 (213)
T ss_pred HHHHHHhccccccc--cccC--------------CCH--------------HHHHHHHHHHHHcCCHHHHhCCccc----
Confidence 99999875331100 0000 000 0012346688999998878888876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|++++|++|
T Consensus 133 -LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~~sH~~-~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 133 -LSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-EGMTILVVTHDL-GLVLEYFDRVLLLNRT- 208 (213)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEeCCH-HHHHHhcCEEEEEcCc-
Confidence 999999999999999999999999999999999999999999999876 477888887765 4778899999999886
Q ss_pred EEEEc
Q 000753 422 IVYQG 426 (1302)
Q Consensus 422 iv~~G 426 (1302)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66554
No 396
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-33 Score=320.01 Aligned_cols=205 Identities=20% Similarity=0.278 Sum_probs=171.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCC-CCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDL-HHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 259 (1302)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35899999999999999999999999999999999999987 999999998875422 2467999999974 5777
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
.||.||+.++....+.. +. + ....++.+++.+||.+..++.+..
T Consensus 97 ~tv~eni~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP----------RE----------E--------------MIKRVDEALLAVNMLDFKTREPAR-- 140 (277)
T ss_pred CCHHHHHHhhHHHcCCC----------HH----------H--------------HHHHHHHHHHHCCCHhHhhCCccc--
Confidence 89999998754321100 00 0 011356788899998878887765
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++. .+|+|++|++
T Consensus 141 ---LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~-~~~-~~d~i~~l~~ 215 (277)
T PRK13642 141 ---LSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLD-EAA-SSDRILVMKA 215 (277)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHH-hCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999998755788888877764 444 6999999999
Q ss_pred CeEEEEcChhHHH
Q 000753 420 GQIVYQGPRDNVL 432 (1302)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1302)
|+++..|+.+++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998875
No 397
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.6e-34 Score=287.93 Aligned_cols=204 Identities=24% Similarity=0.324 Sum_probs=177.2
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCCCHH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVr 263 (1302)
..+|+|||+.|.+|+.++++||||||||||||+++|..+|. .|+|.+||.+++... ..-|.|+|++.++|.+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gPg--aergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGPG--AERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCCC--ccceeEeccCccchhhHHH
Confidence 55899999999999999999999999999999999999997 999999999887543 3458999999999999999
Q ss_pred HHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCC
Q 000753 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1302)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 343 (1302)
||++|+.+++|..... + .....+.+...||++..+..|-. |
T Consensus 93 dNvafgL~l~Gi~k~~-------R---------------------------~~~a~q~l~~VgL~~~~~~~i~q-----L 133 (259)
T COG4525 93 DNVAFGLQLRGIEKAQ-------R---------------------------REIAHQMLALVGLEGAEHKYIWQ-----L 133 (259)
T ss_pred HHHHHHHHhcCCCHHH-------H---------------------------HHHHHHHHHHhCcccccccceEe-----e
Confidence 9999999988865321 1 12356788999999988888876 9
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC--Ce
Q 000753 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE--GQ 421 (1302)
Q Consensus 344 SGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~--G~ 421 (1302)
||||||||.|||||..+|+.|+||||+.+||+-|+.++...|-++.+..|+.+++++ |.-.|..-+++++++|+. |+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lliT-H~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQVLLIT-HDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEEe-ccHHHHHhhhheeEEecCCCce
Confidence 999999999999999999999999999999999999999999998887777766665 456788889999999984 89
Q ss_pred EEEEcChhHHH
Q 000753 422 IVYQGPRDNVL 432 (1302)
Q Consensus 422 iv~~G~~~~~~ 432 (1302)
|+..-+++-..
T Consensus 213 vv~~~~~df~r 223 (259)
T COG4525 213 VVERLPLDFAR 223 (259)
T ss_pred eeEecCCCHHH
Confidence 99877766333
No 398
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=7.8e-34 Score=321.77 Aligned_cols=216 Identities=24% Similarity=0.303 Sum_probs=173.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC--------CccceEEEEccCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF--------VPQRTCAYISQHDL 255 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~--------~~~~~~~yv~Q~d~ 255 (1302)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++... ..++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 4599999999999999999999999999999999999987523369999999876432 11356999999999
Q ss_pred CCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccc
Q 000753 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1302)
Q Consensus 256 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1302)
+++.+||+||+.+....... . .... ... ..+ +....++.+++.+||++..|+.+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~-----~----~~~~--~~~-~~~--------------~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGSTP-----F----WRTC--FSW-FTR--------------EQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhccccc-----c----hhhh--ccc-ccH--------------HHHHHHHHHHHHcCCHHHHhCCc
Confidence 99999999999875321000 0 0000 000 000 01123567889999998888888
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEE
Q 000753 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1302)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ii 415 (1302)
++ |||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++..+.|+|++.|++ .++.+++|+|+
T Consensus 151 ~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~-~~~~~~~d~i~ 224 (262)
T PRK09984 151 ST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQV-DYALRYCERIV 224 (262)
T ss_pred cc-----cCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEE
Confidence 76 9999999999999999999999999999999999999999999999865577888887765 46788999999
Q ss_pred EecCCeEEEEcChhHH
Q 000753 416 LLSEGQIVYQGPRDNV 431 (1302)
Q Consensus 416 lL~~G~iv~~G~~~~~ 431 (1302)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999998764
No 399
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-34 Score=321.20 Aligned_cols=206 Identities=20% Similarity=0.262 Sum_probs=168.3
Q ss_pred cceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC--c-eeEEEEEEcCccCCh-----hhhcceeEEeccCCC
Q 000753 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIKISGYPKNQ-----ETFARVSGYCEQNDI 950 (1302)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 950 (1302)
++.+|+|+|+++++||++||+|+||||||||+++|+|...+ + +.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 20 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 99 (261)
T PRK14263 20 NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQPN 99 (261)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCCc
Confidence 45799999999999999999999999999999999997542 1 247999999987532 234567999999998
Q ss_pred CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccc
Q 000753 951 HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1302)
Q Consensus 951 ~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illL 1030 (1302)
++ .+|+.||+.+....+. . .....+.+.++++.++|.+..+.... ..+..||||||||++|||||+.+|++|+|
T Consensus 100 ~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~~LS~G~~qrv~laral~~~p~llll 173 (261)
T PRK14263 100 PF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLK-VSGLSLSGGQQQRLCIARAIATEPEVLLL 173 (261)
T ss_pred cc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhh-CCcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 77 5999999988754332 1 12234568889999998543222211 12467999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe-------cCcEEEEecCC
Q 000753 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-------RGGRVIYAGPL 1092 (1302)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~-------~gG~~~~~g~~ 1092 (1302)
||||+|||+.++..+.+.|+++. +++|||++||+++ ++.+.||++++|+ ++|++++.|+.
T Consensus 174 DEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 174 DEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred eCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 99999999999999999999986 4799999999986 5678899999996 46899999875
No 400
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=5.8e-34 Score=366.64 Aligned_cols=206 Identities=24% Similarity=0.320 Sum_probs=170.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 260 (1302)
+++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++.. .++.++||+|++.+|+ .
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLFE-G 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhhh-c
Confidence 45899999999999999999999999999999999999997 999999999987664 3688999999999996 5
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
|++|||.++.. +.+.++..+++...+. +..+ -.|++..||.+|+ .+
T Consensus 568 Ti~eNi~l~~~-------------------------~~~~~~i~~al~~~~l------~~~i--~~lp~gl~t~i~e-~G 613 (710)
T TIGR03796 568 TVRDNLTLWDP-------------------------TIPDADLVRACKDAAI------HDVI--TSRPGGYDAELAE-GG 613 (710)
T ss_pred cHHHHhhCCCC-------------------------CCCHHHHHHHHHHhCC------HHHH--HhCcCcccceecc-CC
Confidence 99999987421 0011111122221111 1112 2367788999996 46
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
.+||||||||++||||++++|++++||||||+||+.+..+|.+.|++ .++|+|++.|++ ++...+|+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~IiitHrl--~~i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCIIVAHRL--STIRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEEEecCH--HHHHhCCEEEEEeCC
Confidence 77999999999999999999999999999999999999999999986 378999888876 566789999999999
Q ss_pred eEEEEcChhHHHH
Q 000753 421 QIVYQGPRDNVLE 433 (1302)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1302)
+++.+|+++++.+
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999875
No 401
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=323.24 Aligned_cols=213 Identities=25% Similarity=0.323 Sum_probs=172.2
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC---ceeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1302)
.++++|+++.+. ++.+|+|+||+|++||++||+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 578888886542 24699999999999999999999999999999999997531 12479999999
Q ss_pred ccCC-----hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000753 931 YPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1302)
.+.. ....++.++|++|++.+++. ||.||+.+....+. ... ...+.++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 8753 12456789999999988875 99999987654321 111 23456889999998853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEE-E
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLL-L 1080 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~-l 1080 (1302)
+..||||||||++|||+|+.+|+||||||||+|||+.++..+.+.|+++++ ++|||++||+++ .+...+|++++ |
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 457999999999999999999999999999999999999999999999976 489999999976 56677999765 5
Q ss_pred ecCcEEEEecCC
Q 000753 1081 KRGGRVIYAGPL 1092 (1302)
Q Consensus 1081 ~~gG~~~~~g~~ 1092 (1302)
+ +|+++..|+.
T Consensus 254 ~-~G~i~~~g~~ 264 (285)
T PRK14254 254 T-GGELVEFDDT 264 (285)
T ss_pred e-CCEEEEeCCH
Confidence 5 5899888874
No 402
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-34 Score=321.82 Aligned_cols=210 Identities=22% Similarity=0.348 Sum_probs=173.6
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1302)
.++|+|+|+++++|++++|+|||||||||||++|+|.++++ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 45999999999999999999999999999999999999887 9999999998754322 35799999999999899
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
||+||+.++..-.. + .. . .. .+ .....++.+++.+||++..++.+.+
T Consensus 97 tv~~~~~~~~~~~~-~----~~----------~-~~-~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~--- 143 (265)
T PRK10253 97 TVQELVARGRYPHQ-P----LF----------T-RW-RK-------------EDEEAVTKAMQATGITHLADQSVDT--- 143 (265)
T ss_pred cHHHHHHhCccccc-c----cc----------c-CC-CH-------------HHHHHHHHHHHHcCCHHHhcCCccc---
Confidence 99999987521000 0 00 0 00 00 0011346688899998877887766
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|++|
T Consensus 144 --LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~-~~~~~~~d~i~~l~~G 220 (265)
T PRK10253 144 --LSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDL-NQACRYASHLIALREG 220 (265)
T ss_pred --CChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999998765577888887765 4788999999999999
Q ss_pred eEEEEcChhHHH
Q 000753 421 QIVYQGPRDNVL 432 (1302)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1302)
++++.|+.+++.
T Consensus 221 ~i~~~g~~~~~~ 232 (265)
T PRK10253 221 KIVAQGAPKEIV 232 (265)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 403
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=317.82 Aligned_cols=209 Identities=24% Similarity=0.329 Sum_probs=169.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCccceEEECCcccCCCC---ccceEEEEccCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEFV---PQRTCAYISQHDLHHG 258 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 258 (1302)
.++|+|+|+++++|++++|+||||||||||+++|+|.+++. ...+|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 16 VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 35899999999999999999999999999999999998741 124899999999875432 2467999999998899
Q ss_pred CCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc----ccccc
Q 000753 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CADTM 334 (1302)
Q Consensus 259 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt~ 334 (1302)
.+||+||+.++.+...... +..+ ....++.+++.+||.+ ..|+.
T Consensus 96 ~~tv~enl~~~~~~~~~~~------------------~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~~ 143 (250)
T PRK14247 96 NLSIFENVALGLKLNRLVK------------------SKKE--------------LQERVRWALEKAQLWDEVKDRLDAP 143 (250)
T ss_pred CCcHHHHHHHHHHhccccC------------------CHHH--------------HHHHHHHHHHHcCCCcchhhhhcCC
Confidence 9999999988643211000 0000 0123456788889854 35666
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeE
Q 000753 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1302)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~i 414 (1302)
+.+ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++|++
T Consensus 144 ~~~-----LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~-~~~~~~~d~i 215 (250)
T PRK14247 144 AGK-----LSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK--DMTIVLVTHFP-QQAARISDYV 215 (250)
T ss_pred ccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEEeCCH-HHHHHhcCEE
Confidence 655 999999999999999999999999999999999999999999999854 67877777765 4777899999
Q ss_pred EEecCCeEEEEcChhHHH
Q 000753 415 ILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 415 ilL~~G~iv~~G~~~~~~ 432 (1302)
++|++|+++..|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 216 AFLYKGQIVEWGPTREVF 233 (250)
T ss_pred EEEECCeEEEECCHHHHH
Confidence 999999999999988764
No 404
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1e-33 Score=321.28 Aligned_cols=225 Identities=24% Similarity=0.349 Sum_probs=177.6
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|+++.++... ..+ +..++.+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~nl~~~~~~~~---~~~-~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSG-KHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---ccc-ccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 56778776553100 000 0113569999999999999999999999999999999999765 35799999998753
Q ss_pred h------hhhcceeEEeccCC--CCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000753 935 Q------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVS 1005 (1302)
Q Consensus 935 ~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~ 1005 (1302)
. ...++.++|++|++ .+.+..|+.|++.+..... ......+....++++++.+++. ...+.. +.
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 2 12456799999997 3667899999987643211 1122334445688999999996 455554 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000753 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1302)
Q Consensus 1006 ~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG 1084 (1302)
.||+|||||++|||+|+.+|++|||||||+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.||++++|.+ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998764 899999999986 56678999999985 7
Q ss_pred EEEEecCCCc
Q 000753 1085 RVIYAGPLGH 1094 (1302)
Q Consensus 1085 ~~~~~g~~~~ 1094 (1302)
++++.|+..+
T Consensus 229 ~i~~~g~~~~ 238 (268)
T PRK10419 229 QIVETQPVGD 238 (268)
T ss_pred EEeeeCChhh
Confidence 9999888643
No 405
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=352.11 Aligned_cols=207 Identities=26% Similarity=0.334 Sum_probs=173.8
Q ss_pred cceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh----hhhcceeEEeccCCCCCCC
Q 000753 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQNDIHSPY 954 (1302)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~~ 954 (1302)
++.+|+||||++++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.
T Consensus 10 ~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 10 GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 4569999999999999999999999999999999999765 347999999987532 2235679999999988899
Q ss_pred CCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 000753 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1302)
Q Consensus 955 lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPT 1034 (1302)
+||+||+.+............++..+.++++++.+++.+..++.+ ..|||||||||+||+||+.+|++|||||||
T Consensus 88 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt 162 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPT 162 (491)
T ss_pred CCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 999999987532111111123334456889999999987777663 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCc
Q 000753 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1302)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~ 1094 (1302)
+|||+.++..+++.|+++++.|+|||++||+++ ++...||++++|.+ |+++..|+..+
T Consensus 163 ~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 163 SSLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 999999999999999999878999999999986 56778999999985 79999988654
No 406
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.1e-33 Score=320.93 Aligned_cols=207 Identities=22% Similarity=0.241 Sum_probs=170.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCC--CCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDL--HHG 258 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 258 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999987 9999999988753221 346999999874 567
Q ss_pred CCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc-ccccccccC
Q 000753 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTMVGD 337 (1302)
Q Consensus 259 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~ 337 (1302)
.+||.|++.+..+..... ... +....++.+++.+||. +..++.+.+
T Consensus 103 ~~tv~~~l~~~~~~~~~~-------------------~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~~ 149 (267)
T PRK15112 103 RQRISQILDFPLRLNTDL-------------------EPE--------------QREKQIIETLRQVGLLPDHASYYPHM 149 (267)
T ss_pred chhHHHHHHHHHHhccCC-------------------CHH--------------HHHHHHHHHHHHcCCChHHHhcCchh
Confidence 889999998754321000 000 0111346688999994 566777665
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++..++|++++|
T Consensus 150 -----LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~-~~~~~~~d~i~~l 223 (267)
T PRK15112 150 -----LAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHL-GMMKHISDQVLVM 223 (267)
T ss_pred -----cCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCH-HHHHHhcCEEEEE
Confidence 9999999999999999999999999999999999999999999999765577888877765 5788899999999
Q ss_pred cCCeEEEEcChhHHH
Q 000753 418 SEGQIVYQGPRDNVL 432 (1302)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1302)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 407
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=3.9e-34 Score=308.53 Aligned_cols=179 Identities=25% Similarity=0.319 Sum_probs=150.3
Q ss_pred cceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh-----hhhcceeEEeccCCC-CC
Q 000753 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-----ETFARVSGYCEQNDI-HS 952 (1302)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~-~~ 952 (1302)
++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++. ..
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 3469999999999999999999999999999999999765 347999999987531 234567999999973 23
Q ss_pred CCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccC
Q 000753 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1302)
Q Consensus 953 ~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDE 1032 (1302)
...||+||+.+..... ....++..+.++++++.++|.+..++. +..||||||||++|||||+.+|++|+|||
T Consensus 82 ~~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 82 FAADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERP-----THCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3579999998864322 122334445688999999998877776 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCcc
Q 000753 1033 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1067 (1302)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~ 1067 (1302)
||+|||+.++..+.+.|++++++|+|||++||+++
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 99999999999999999999877999999999864
No 408
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=321.35 Aligned_cols=205 Identities=27% Similarity=0.357 Sum_probs=169.1
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCC--C---CccceEEEEccCCC-CC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNE--F---VPQRTCAYISQHDL-HH 257 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~ 257 (1302)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 35899999999999999999999999999999999999987 9999999998742 1 12357999999975 24
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
...|+.||+.+.....+.. ..+ ....++.+++.+||++..++.+++
T Consensus 91 ~~~~~~~~l~~~~~~~~~~--------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 136 (271)
T PRK13638 91 FYTDIDSDIAFSLRNLGVP--------------------EAE--------------ITRRVDEALTLVDAQHFRHQPIQC 136 (271)
T ss_pred ccccHHHHHHHHHHHcCCC--------------------HHH--------------HHHHHHHHHHHcCCHhHhcCCchh
Confidence 4568999998753321100 000 011245678899998888888776
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|++ .++.+++|++++|
T Consensus 137 -----LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-g~tii~vtH~~-~~~~~~~d~i~~l 209 (271)
T PRK13638 137 -----LSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQ-GNHVIISSHDI-DLIYEISDAVYVL 209 (271)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998753 77877776655 5777899999999
Q ss_pred cCCeEEEEcChhHHH
Q 000753 418 SEGQIVYQGPRDNVL 432 (1302)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1302)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 210 RQGQILTHGAPGEVF 224 (271)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 409
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=4.7e-34 Score=352.89 Aligned_cols=212 Identities=21% Similarity=0.320 Sum_probs=179.4
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.++ ++.+|+||||+|++|+++||+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 477888877552 3469999999999999999999999999999999999765 3479999999875
Q ss_pred Ch---hhh-cceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000753 934 NQ---ETF-ARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1302)
Q Consensus 934 ~~---~~~-~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1302)
.. ... ++.+||++|++.+++.+||+||+.+... . .....+.+.++++.++|.+..++.+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 32 122 3468999999999999999999987531 1 1223456889999999988777764 47999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000753 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1302)
Q Consensus 1010 GqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~ 1089 (1302)
||||||+||+||+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ .+...||++++|.+ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999878999999999976 56678999999985 789999
Q ss_pred cCCCc
Q 000753 1090 GPLGH 1094 (1302)
Q Consensus 1090 g~~~~ 1094 (1302)
|+..+
T Consensus 222 g~~~~ 226 (510)
T PRK15439 222 GKTAD 226 (510)
T ss_pred cChHH
Confidence 88654
No 410
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5.8e-34 Score=315.32 Aligned_cols=209 Identities=22% Similarity=0.362 Sum_probs=168.3
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 477888876542 3469999999999999999999999999999999999754 3479999999865
Q ss_pred Ch---hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 000753 934 NQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLST 1009 (1302)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSg 1009 (1302)
.. ..+++.++|++|++.+++ .|++||+.+...++.. . ...+.++++++.+++. ...+.. +..||+
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---Q--PDPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---C--hHHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 32 234567999999988887 4999999875433221 1 1124467899999995 355554 457999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000753 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1302)
Q Consensus 1010 GqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~ 1088 (1302)
|||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ .|.|||++||+++ .+ +.||++++|.+.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEecccchHh
Confidence 999999999999999999999999999999999999999999875 4899999999986 34 57999999964443333
Q ss_pred ec
Q 000753 1089 AG 1090 (1302)
Q Consensus 1089 ~g 1090 (1302)
.|
T Consensus 219 ~~ 220 (225)
T PRK10247 219 EA 220 (225)
T ss_pred hh
Confidence 33
No 411
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=7.2e-34 Score=363.99 Aligned_cols=206 Identities=25% Similarity=0.374 Sum_probs=167.2
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1302)
+++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++.+|+ .
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~-g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFS-G 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCccccc-c
Confidence 46999999999999999999999999999999999999997 9999999999877653 578999999999996 5
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
|+||||.++..-. +.++..+++...+. +..++ .|++..||.+|+ .+
T Consensus 570 TIreNI~~g~~~~-------------------------~~e~i~~al~~a~l------~~~i~--~lp~GldT~ige-~G 615 (711)
T TIGR00958 570 SVRENIAYGLTDT-------------------------PDEEIMAAAKAANA------HDFIM--EFPNGYDTEVGE-KG 615 (711)
T ss_pred CHHHHHhcCCCCC-------------------------CHHHHHHHHHHcCC------HHHHH--hCCCccCCcccC-CC
Confidence 9999998853210 01111111111111 11222 367788999996 45
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
..||||||||++||||++++|+|++||||||+||+.+...+.+ ... ..++|+|++.|++ ++.+.+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~~~~TvIiItHrl--~~i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---RASRTVLLIAHRL--STVERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---cCCCeEEEEeccH--HHHHhCCEEEEEECC
Confidence 6799999999999999999999999999999999999998888 222 2478998888876 467889999999999
Q ss_pred eEEEEcChhHHHH
Q 000753 421 QIVYQGPRDNVLE 433 (1302)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1302)
+++.+|+++++.+
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999999864
No 412
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.3e-33 Score=314.95 Aligned_cols=206 Identities=27% Similarity=0.409 Sum_probs=174.7
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-cceEEEEccCCCCCCCCCH
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1302)
+++|+|+|+++.+|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|+
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 36999999999999999999999999999999999999886 9999999988764332 4679999999999999999
Q ss_pred HHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCC
Q 000753 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1302)
Q Consensus 263 rE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1302)
+||+.+..+..+.. .. .....++.+++.++|....++.+++
T Consensus 90 ~enl~~~~~~~~~~---------------------~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (237)
T TIGR00968 90 RDNIAFGLEIRKHP---------------------KA-------------KIKARVEELLELVQLEGLGDRYPNQ----- 130 (237)
T ss_pred HHHHHhHHHhcCCC---------------------HH-------------HHHHHHHHHHHHcCCHhHhhCChhh-----
Confidence 99998764322100 00 0011245678889998777877766
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeE
Q 000753 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1302)
Q Consensus 343 LSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~i 422 (1302)
||||||||++||++|+.+|++++|||||+|||..+...+.+.|+++++..++|++++.|++ .++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~-~~~~~~~d~i~~l~~g~i 209 (237)
T TIGR00968 131 LSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQ-EEAMEVADRIVVMSNGKI 209 (237)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHhhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998765478888888876 477889999999999999
Q ss_pred EEEcChhHHH
Q 000753 423 VYQGPRDNVL 432 (1302)
Q Consensus 423 v~~G~~~~~~ 432 (1302)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (237)
T TIGR00968 210 EQIGSPDEVY 219 (237)
T ss_pred EEecCHHHHH
Confidence 9999988764
No 413
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=317.52 Aligned_cols=215 Identities=23% Similarity=0.319 Sum_probs=171.5
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCC--Cc-eeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~g-~~~G~i~i~g 930 (1302)
.+.++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 467888876542 2469999999999999999999999999999999999642 11 2379999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1302)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.+.+.++.+++.. ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--- 145 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHES--- 145 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcC---
Confidence 87631 234567999999998887 6999999876443221 112222345677888887642 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ .+.+.+|++++|+
T Consensus 146 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14255 146 --ALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 589999999986 5677899999998
Q ss_pred cCcEEEEecCC
Q 000753 1082 RGGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1302)
+ |+++..|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14255 222 T-GNLIEFADT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 788888864
No 414
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=318.76 Aligned_cols=209 Identities=21% Similarity=0.339 Sum_probs=168.0
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCccceEEECCcccCC--C---CccceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNE--F---VPQRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~--~---~~~~~~~yv~Q~d~~ 256 (1302)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ ...+|+|+++|+++.. . ..++.++|++|++.+
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (253)
T PRK14267 17 NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNP 96 (253)
T ss_pred eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCcc
Confidence 35899999999999999999999999999999999998762 1248999999998752 1 124579999999999
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc----ccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CAD 332 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~d 332 (1302)
++.+||.||+.++....+... +..+ ....++.+++.+||.. ..+
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~------------------~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 144 (253)
T PRK14267 97 FPHLTIYDNVAIGVKLNGLVK------------------SKKE--------------LDERVEWALKKAALWDEVKDRLN 144 (253)
T ss_pred CCCCcHHHHHHHHHHhcCccC------------------CHHH--------------HHHHHHHHHHHcCCccchhhhhc
Confidence 999999999987643211000 0000 0112455777888742 345
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++..++|
T Consensus 145 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~-~~~~~~~d 216 (253)
T PRK14267 145 DYPSN-----LSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--EYTIVLVTHSP-AQAARVSD 216 (253)
T ss_pred cChhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--CCEEEEEECCH-HHHHhhCC
Confidence 55544 999999999999999999999999999999999999999999999865 57888887765 47788999
Q ss_pred eEEEecCCeEEEEcChhHHH
Q 000753 413 DIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1302)
+|++|++|++++.|+.+++.
T Consensus 217 ~i~~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 217 YVAFLYLGKLIEVGPTRKVF 236 (253)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 415
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=3.3e-34 Score=311.70 Aligned_cols=185 Identities=28% Similarity=0.333 Sum_probs=158.9
Q ss_pred cceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh--hhhcceeEEeccCCCCCCCCC
Q 000753 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVT 956 (1302)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 956 (1302)
++.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.+++.+|
T Consensus 12 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (201)
T cd03231 12 GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTTLS 89 (201)
T ss_pred CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccccHHhhhheEEeccccccCCCcC
Confidence 35699999999999999999999999999999999997653 47999999987532 335667999999998888999
Q ss_pred HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 000753 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1036 (1302)
Q Consensus 957 v~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsg 1036 (1302)
++||+.+.... . ..+.++++++.+++.+..++. +..||||||||++|||+|+.+|++|+|||||+|
T Consensus 90 v~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~ 155 (201)
T cd03231 90 VLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRP-----VAQLSAGQQRRVALARLLLSGRPLWILDEPTTA 155 (201)
T ss_pred HHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCC
Confidence 99999875311 1 134578899999998777665 357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEE
Q 000753 1037 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1302)
Q Consensus 1037 LD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l 1080 (1302)
||+.++..+++.|+++.++|+|||++||++. +....+++++.+
T Consensus 156 LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 156 LDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 9999999999999998777999999999975 677788888766
No 416
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-34 Score=320.11 Aligned_cols=209 Identities=25% Similarity=0.399 Sum_probs=172.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 260 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|+..+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 46999999999999999999999999999999999999886 999999998765432 235699999999888889
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
||.||+.|+..... ..+ +. ...+ ....++.+++.+||++..++.+++
T Consensus 92 tv~~~i~~~~~~~~--~~~-------------~~-~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~--- 138 (255)
T PRK11231 92 TVRELVAYGRSPWL--SLW-------------GR-LSAE--------------DNARVNQAMEQTRINHLADRRLTD--- 138 (255)
T ss_pred cHHHHHHhccchhh--hhc-------------cC-CCHH--------------HHHHHHHHHHHcCCHHHHcCCccc---
Confidence 99999988531000 000 00 0000 012346678899998888888776
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|++ .++.+++|++++|++|
T Consensus 139 --LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~-~~tiii~tH~~-~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 139 --LSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQ-GKTVVTVLHDL-NQASRYCDHLVVLANG 214 (255)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHC-CCEEEEEECCH-HHHHHhcCEEEEEECC
Confidence 9999999999999999999999999999999999999999999998753 77888887765 4788999999999999
Q ss_pred eEEEEcChhHHH
Q 000753 421 QIVYQGPRDNVL 432 (1302)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1302)
++++.|+.+++.
T Consensus 215 ~i~~~~~~~~~~ 226 (255)
T PRK11231 215 HVMAQGTPEEVM 226 (255)
T ss_pred eEEEEcCHHHhc
Confidence 999999987763
No 417
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-34 Score=350.97 Aligned_cols=216 Identities=29% Similarity=0.351 Sum_probs=178.3
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.++ ++.+|+||||++++||+++|+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 367788776542 3469999999999999999999999999999999999765 3479999999875
Q ss_pred Ch----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000753 934 NQ----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1302)
Q Consensus 934 ~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1302)
.. ..+++.+||++|++.+++.+||.||+.+....+........+..+.+.++++.++|.+..++. +..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTP-----LKYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCc-----hhhCCH
Confidence 32 234567999999999999999999998753211111112334455688999999998766665 457999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000753 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1302)
Q Consensus 1010 GqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~ 1089 (1302)
|||||++||++|+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++...||++++|++ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999878999999999986 56778999999986 788776
Q ss_pred cC
Q 000753 1090 GP 1091 (1302)
Q Consensus 1090 g~ 1091 (1302)
++
T Consensus 222 ~~ 223 (501)
T PRK11288 222 FD 223 (501)
T ss_pred cC
Confidence 65
No 418
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=322.42 Aligned_cols=209 Identities=25% Similarity=0.325 Sum_probs=172.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCC-CCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDL-HHGE 259 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 259 (1302)
+++|+|||++|++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 35899999999999999999999999999999999999886212399999999876432 2457999999974 5677
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCcc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1302)
+||+||+.|..+..+.. . .+....++.+++.+||++..++.+.+
T Consensus 100 ~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~L~~~~~~~~~~-- 143 (282)
T PRK13640 100 ATVGDDVAFGLENRAVP----------R------------------------PEMIKIVRDVLADVGMLDYIDSEPAN-- 143 (282)
T ss_pred CCHHHHHHhhHHhCCCC----------H------------------------HHHHHHHHHHHHHCCChhHhcCCccc--
Confidence 89999998753321100 0 00112356688999999888888765
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC
Q 000753 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1302)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~ 419 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++. ++ ..+|++++|++
T Consensus 144 ---LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~-~~~d~i~~l~~ 218 (282)
T PRK13640 144 ---LSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDID-EA-NMADQVLVLDD 218 (282)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999997655788888888765 45 57999999999
Q ss_pred CeEEEEcChhHHHH
Q 000753 420 GQIVYQGPRDNVLE 433 (1302)
Q Consensus 420 G~iv~~G~~~~~~~ 433 (1302)
|++++.|+++++.+
T Consensus 219 G~i~~~g~~~~~~~ 232 (282)
T PRK13640 219 GKLLAQGSPVEIFS 232 (282)
T ss_pred CEEEEeCCHHHHhc
Confidence 99999999988753
No 419
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.4e-34 Score=321.31 Aligned_cols=196 Identities=23% Similarity=0.397 Sum_probs=154.6
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC---hhhhcceeEEeccCCCCCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN---QETFARVSGYCEQNDIHSPYVT 956 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lT 956 (1302)
+.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.. ...+++.++|++|++.+++ .|
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 91 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-RS 91 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-ch
Confidence 459999999999999999999999999999999999765 34799999998653 2345677999999987765 69
Q ss_pred HHHHHHHHHHhhCCCCCcHHHHH-----HHHHHHHHHc--CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcc
Q 000753 957 VYESLLYSAWLRLSSDVDTKKRK-----MFVDEVMELV--ELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1029 (1302)
Q Consensus 957 v~E~l~~~~~lr~~~~~~~~~~~-----~~v~~~l~~l--~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~ill 1029 (1302)
|.||+.+... ........ ..++++++.+ ++....+.. +..||||||||++|||||+.+|++|+
T Consensus 92 v~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~p~lll 161 (237)
T cd03252 92 IRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----GAGLSGGQRQRIAIARALIHNPRILI 161 (237)
T ss_pred HHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----CCcCCHHHHHHHHHHHHHhhCCCEEE
Confidence 9999976421 11111100 1122333333 333333332 46899999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1030 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
|||||+|||+.++..+.+.|++++ +|+|||++||+++ ++ ..||++++|.+ |++++.|+.
T Consensus 162 lDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (237)
T cd03252 162 FDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLS-TV-KNADRIIVMEK-GRIVEQGSH 220 (237)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-HhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999999986 4899999999986 34 56999999985 789988874
No 420
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=313.94 Aligned_cols=202 Identities=23% Similarity=0.398 Sum_probs=170.9
Q ss_pred ceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc-cceEEEEccCCCCCCCCCHHHHHH
Q 000753 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTVRETLD 267 (1302)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVrE~l~ 267 (1302)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999887 9999999998754322 457999999999999999999998
Q ss_pred hhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCChHH
Q 000753 268 FSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQ 347 (1302)
Q Consensus 268 f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGq 347 (1302)
+.... ... . .. .....++.+++.+||++..++.+.+ |||||
T Consensus 94 ~~~~~-~~~--~-----------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLK--L-----------------NA--------------AQREKLHAIARQMGIEDLLARLPGQ-----LSGGQ 134 (232)
T ss_pred ccccc-ccC--C-----------------CH--------------HHHHHHHHHHHHcCcHHHHhCCccc-----CCHHH
Confidence 75321 000 0 00 0012346688999999888888876 99999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEEEEcC
Q 000753 348 KKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGP 427 (1302)
Q Consensus 348 kqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv~~G~ 427 (1302)
||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~-~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSL-EDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCH-HHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998765577888887766 47788999999999999999999
Q ss_pred hhHHHH
Q 000753 428 RDNVLE 433 (1302)
Q Consensus 428 ~~~~~~ 433 (1302)
.+++.+
T Consensus 214 ~~~~~~ 219 (232)
T PRK10771 214 TDELLS 219 (232)
T ss_pred HHHHHh
Confidence 887653
No 421
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=327.21 Aligned_cols=214 Identities=17% Similarity=0.210 Sum_probs=170.1
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC-CCccceEEECCcccCCCCc-------cceEEEEccCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD-LRASGKITYCGHELNEFVP-------QRTCAYISQHDL 255 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~-~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 255 (1302)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++. ...+|+|.++|+++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 56999999999999999999999999999999999998641 1238999999998765432 246999999975
Q ss_pred --CCCCCCHHHHHHhhhhccCC-CchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc---
Q 000753 256 --HHGEMTVRETLDFSGRCLGV-GTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI--- 329 (1302)
Q Consensus 256 --~~~~lTVrE~l~f~~~~~~~-~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--- 329 (1302)
+.|.+||.+++.+....... +..+ .+. .+....+..+++.+||++
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~----------------~~~-------------~~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWW----------------QRF-------------GWRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccccc----------------ccH-------------HHHHHHHHHHHHHCCCCChHH
Confidence 67889999999753221000 0000 000 001123567899999975
Q ss_pred cccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHh
Q 000753 330 CADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYD 409 (1302)
Q Consensus 330 ~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~ 409 (1302)
..++.+.+ |||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+..+.|+|++.|+ ...+.+
T Consensus 151 ~~~~~p~~-----LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHd-l~~v~~ 224 (330)
T PRK15093 151 AMRSFPYE-----LTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHD-LQMLSQ 224 (330)
T ss_pred HHhCCchh-----CCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECC-HHHHHH
Confidence 34566655 999999999999999999999999999999999999999999999987667787777665 467889
Q ss_pred hcCeEEEecCCeEEEEcChhHHH
Q 000753 410 LFDDIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 410 ~~D~iilL~~G~iv~~G~~~~~~ 432 (1302)
++|+|++|++|+|++.|+.+++.
T Consensus 225 ~~dri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 225 WADKINVLYCGQTVETAPSKELV 247 (330)
T ss_pred hCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999988774
No 422
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=5.8e-34 Score=352.18 Aligned_cols=209 Identities=22% Similarity=0.334 Sum_probs=172.8
Q ss_pred cceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChh----hhcceeEEeccCCCCCCC
Q 000753 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE----TFARVSGYCEQNDIHSPY 954 (1302)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~~ 954 (1302)
++.+|+|||+++++||++||+||||||||||+++|+|...+++.+|+|.++|.++... ..++.+|||+|++.+++.
T Consensus 13 ~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 13 GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 3569999999999999999999999999999999999765322479999999876421 124569999999999999
Q ss_pred CCHHHHHHHHHHhhCCC-CCcHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccC
Q 000753 955 VTVYESLLYSAWLRLSS-DVDTKKRKMFVDEVMELVELKSLN-DSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1302)
Q Consensus 955 lTv~E~l~~~~~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDE 1032 (1302)
+||.||+.+....+... ....++..+.++++++.+++.+.. ++. +..|||||||||+||+||+.+|++|||||
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~iA~al~~~p~lllLDE 167 (500)
T TIGR02633 93 LSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYGGGQQQLVEIAKALNKQARLLILDE 167 (500)
T ss_pred CcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCCHHHHHHHHHHHHHhhCCCEEEEeC
Confidence 99999998764322111 112333445688999999997654 343 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCc
Q 000753 1033 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1302)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~ 1094 (1302)
||+|||+.+...+.+.|++++++|+|||++||+++ ++...||++++|++ |++++.|+..+
T Consensus 168 Pt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 227 (500)
T TIGR02633 168 PSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVATKDMST 227 (500)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEeeecCccc
Confidence 99999999999999999999888999999999986 56678999999986 78888887654
No 423
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=321.11 Aligned_cols=216 Identities=20% Similarity=0.267 Sum_probs=173.5
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC--c-eeEEEEEEc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIKIS 929 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g-~~~G~i~i~ 929 (1302)
..+.++|+++.++ ++.+|+|||++|++||+++|+|+||||||||+++|+|.... + +..|+|.++
T Consensus 19 ~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (274)
T PRK14265 19 SVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYR 85 (274)
T ss_pred ceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEEC
Confidence 3578888887542 24699999999999999999999999999999999996431 1 247999999
Q ss_pred CccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----ccccccc
Q 000753 930 GYPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVG 1000 (1302)
Q Consensus 930 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g 1000 (1302)
|.++.. ..+++.++|++|++.+++. ||.||+.+....+. .. ...++.+.++++.+++.. ..+..
T Consensus 86 g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 158 (274)
T PRK14265 86 DRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKEK-- 158 (274)
T ss_pred CEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcCC--
Confidence 987531 2345689999999988875 99999987643321 11 122344677888888742 22332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEE
Q 000753 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1302)
Q Consensus 1001 ~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l 1080 (1302)
+..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|
T Consensus 159 ---~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l 233 (274)
T PRK14265 159 ---GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFF 233 (274)
T ss_pred ---cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEE
Confidence 457999999999999999999999999999999999999999999999874 799999999986 577889999999
Q ss_pred e--------cCcEEEEecCCC
Q 000753 1081 K--------RGGRVIYAGPLG 1093 (1302)
Q Consensus 1081 ~--------~gG~~~~~g~~~ 1093 (1302)
+ +.|++++.|++.
T Consensus 234 ~~~~~~~~~~~G~~~~~g~~~ 254 (274)
T PRK14265 234 NTEIDEYGKRRGKLVEFSPTE 254 (274)
T ss_pred ecccccccccCceEEEeCCHH
Confidence 7 258999999863
No 424
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=1.1e-33 Score=317.64 Aligned_cols=198 Identities=26% Similarity=0.366 Sum_probs=168.0
Q ss_pred eecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh---hhhcceeEEeccCCCCCCCCCHH
Q 000753 882 LLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYVTVY 958 (1302)
Q Consensus 882 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~ 958 (1302)
+|+||||++++||+++|+|+||||||||+++|+|... .+|+|.++|.+... ...++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999764 27999999987632 23445689999998888889999
Q ss_pred HHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh-------CCCCcccc
Q 000753 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVA-------NPSIIFMD 1031 (1302)
Q Consensus 959 E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~-------~P~illLD 1031 (1302)
||+.+.... ........+.++++++.++|.+..++. +..||||||||++||+||+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRS-----VNQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCC-----cccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 112223345688999999998776665 35799999999999999998 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1032 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
|||+|||+.++..+.+.|++++++|+|||++||+++ ++...||++++|++ |++++.|+..
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 218 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRRD 218 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999999877999999999976 57788999999985 7899888753
No 425
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=320.69 Aligned_cols=215 Identities=22% Similarity=0.240 Sum_probs=171.7
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCC--C-ceeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i~g 930 (1302)
.+.++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 578889887552 2359999999999999999999999999999999999653 1 13579999999
Q ss_pred ccCC-----hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000753 931 YPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK----SLNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~~g~ 1001 (1302)
.+.. ...+++.++|++|++.+++ .|++||+.+....+. ....+...+.+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 8753 1234667999999998887 499999988643221 111222334567777777543 222332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.||++++|+
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999875 799999999986 4667899999998
Q ss_pred cCcEEEEecCC
Q 000753 1082 RGGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1302)
+ |++++.|+.
T Consensus 241 ~-G~i~~~g~~ 250 (271)
T PRK14238 241 N-GYVNEYDDT 250 (271)
T ss_pred C-CEEEEeCCH
Confidence 5 789888874
No 426
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-35 Score=296.43 Aligned_cols=220 Identities=25% Similarity=0.388 Sum_probs=185.2
Q ss_pred cccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC---hhhhcceeEEeccCCCC
Q 000753 875 VGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN---QETFARVSGYCEQNDIH 951 (1302)
Q Consensus 875 ~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~ 951 (1302)
+.++.+.+|++||..|++|.+++|+|||||||||||.++++... ..+|+|.++|.+.. ...+++.++..-|+...
T Consensus 9 K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i 86 (252)
T COG4604 9 KSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQENHI 86 (252)
T ss_pred HhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhhchh
Confidence 34567889999999999999999999999999999999998655 34799999998763 35677888889999888
Q ss_pred CCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcccc
Q 000753 952 SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1302)
Q Consensus 952 ~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLD 1031 (1302)
...+||+|-+.|+..-... ....++....++++++.++|+++.|+.. .+||||||||.-||+.|+.+.+.++||
T Consensus 87 ~~rlTV~dLv~FGRfPYSq-GRlt~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdyvlLD 160 (252)
T COG4604 87 NSRLTVRDLVGFGRFPYSQ-GRLTKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDYVLLD 160 (252)
T ss_pred hheeEHHHHhhcCCCcccC-CCCchHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcEEEec
Confidence 8899999999997533222 2233455677999999999999999985 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCc--chhhHHHHHH
Q 000753 1032 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH--ESHKLIEYFE 1104 (1302)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~--~~~~~~~~f~ 1104 (1302)
||.++||...+..+|+.|++++++ |+|||++.||.+. ...++|.++.|++ |+++..|++.+ ..+-+.+.|+
T Consensus 161 EPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~eii~~~~L~eiyd 234 (252)
T COG4604 161 EPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPDEIIQPEILSEIYD 234 (252)
T ss_pred CcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHHHhcCHHHHHHHhc
Confidence 999999999999999999999865 9999999999764 3456799999985 89999999865 2333444443
No 427
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.3e-32 Score=352.66 Aligned_cols=213 Identities=27% Similarity=0.418 Sum_probs=176.0
Q ss_pred CcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCc
Q 000753 852 PLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGY 931 (1302)
Q Consensus 852 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~ 931 (1302)
+..++++|++|.++. +.+.+|+|+|++|+|||++||+|+||||||||+++|+|... +.+|+|.+||.
T Consensus 453 ~~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~--p~~G~I~idg~ 519 (694)
T TIGR01846 453 RGAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYT--PQHGQVLVDGV 519 (694)
T ss_pred CCeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCE
Confidence 346899999987741 12459999999999999999999999999999999999765 34799999999
Q ss_pred cCC---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccC
Q 000753 932 PKN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGL 1001 (1302)
Q Consensus 932 ~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~ 1001 (1302)
++. ...+++.+|||+|++.+++ .|++||+.+.. .+.+ ++.+.++++..++.+. .|+.++.
T Consensus 520 ~i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~-----~~~~----~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~ 589 (694)
T TIGR01846 520 DLAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN-----PGAP----FEHVIHAAKLAGAHDFISELPQGYNTEVGE 589 (694)
T ss_pred ehhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC-----CCCC----HHHHHHHHHHcChHHHHHhCcCccCcEecC
Confidence 864 3567888999999998876 59999997642 1222 2335667777776543 3445554
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
. ..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++. +++|+|++||+++ ....||++++|+
T Consensus 590 ~-g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~ 665 (694)
T TIGR01846 590 K-GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLE 665 (694)
T ss_pred C-CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEe
Confidence 3 46799999999999999999999999999999999999999999999985 5899999999985 456799999998
Q ss_pred cCcEEEEecCC
Q 000753 1082 RGGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1302)
+ |++++.|+.
T Consensus 666 ~-G~i~~~g~~ 675 (694)
T TIGR01846 666 K-GQIAESGRH 675 (694)
T ss_pred C-CEEEEeCCH
Confidence 5 899999985
No 428
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3.7e-32 Score=348.79 Aligned_cols=212 Identities=27% Similarity=0.427 Sum_probs=177.1
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1302)
..++|+|++|.++. +.+.+|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 462 ~~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 528 (694)
T TIGR03375 462 GEIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQ--PTEGSVLLDGVD 528 (694)
T ss_pred ceEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 46899999998742 12459999999999999999999999999999999999766 357999999988
Q ss_pred CC---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000753 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1302)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1302)
+. ...+++.++||+|++.+++ .|++||+.++. .+.+ ++.++++++..++.+. .|+.+|..
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~-----~~~~----~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA-----PYAD----DEEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC-----CCCC----HHHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 64 3567889999999999887 49999998642 1222 2336777777777553 34455543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++. +++|+|++||+++ ....||++++|++
T Consensus 599 -G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~ 674 (694)
T TIGR03375 599 -GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN 674 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 35799999999999999999999999999999999999999999999986 4899999999975 5678999999985
Q ss_pred CcEEEEecCC
Q 000753 1083 GGRVIYAGPL 1092 (1302)
Q Consensus 1083 gG~~~~~g~~ 1092 (1302)
|++++.|+.
T Consensus 675 -G~i~e~G~~ 683 (694)
T TIGR03375 675 -GRIVADGPK 683 (694)
T ss_pred -CEEEeeCCH
Confidence 899999974
No 429
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=324.96 Aligned_cols=206 Identities=19% Similarity=0.301 Sum_probs=168.1
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCC--------CCccceEEEEccCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNE--------FVPQRTCAYISQHDL 255 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~--------~~~~~~~~yv~Q~d~ 255 (1302)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. ...++.++|++|++.
T Consensus 24 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~ 100 (289)
T PRK13645 24 FKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPE 100 (289)
T ss_pred cceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcc
Confidence 35899999999999999999999999999999999999886 9999999987642 112457999999973
Q ss_pred C-CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc-ccccc
Q 000753 256 H-HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADT 333 (1302)
Q Consensus 256 ~-~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 333 (1302)
. +...||+||+.|+....+.. .. +....++.+++.+||+ +..++
T Consensus 101 ~~~~~~tv~enl~~~~~~~~~~----------~~------------------------~~~~~~~~ll~~~~L~~~~~~~ 146 (289)
T PRK13645 101 YQLFQETIEKDIAFGPVNLGEN----------KQ------------------------EAYKKVPELLKLVQLPEDYVKR 146 (289)
T ss_pred hhhhhhHHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCChhHhcC
Confidence 2 22469999998853321100 00 0011245678889995 56777
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCe
Q 000753 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1302)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ 413 (1302)
.+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..++|+|++.|++ .++.+++|+
T Consensus 147 ~~~~-----LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~-~~~~~~~d~ 220 (289)
T PRK13645 147 SPFE-----LSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNM-DQVLRIADE 220 (289)
T ss_pred Chhh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCE
Confidence 7766 9999999999999999999999999999999999999999999998765577888887765 478889999
Q ss_pred EEEecCCeEEEEcChhHHH
Q 000753 414 IILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1302)
+++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 221 VIVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999988764
No 430
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.5e-33 Score=318.36 Aligned_cols=209 Identities=28% Similarity=0.415 Sum_probs=172.0
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1302)
..+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 46999999999999999999999999999999999999887 9999999998765322 34699999998778889
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
||+||+.++..... +. ... +.. +....++.+++.+||.+..++.+++
T Consensus 91 tv~e~l~~~~~~~~---------~~------~~~-~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~--- 137 (256)
T TIGR03873 91 TVRDVVALGRIPHR---------SL------WAG-DSP--------------HDAAVVDRALARTELSHLADRDMST--- 137 (256)
T ss_pred CHHHHHHhcchhhh---------hh------ccC-CCH--------------HHHHHHHHHHHHcCcHhhhcCCccc---
Confidence 99999987421000 00 000 000 0011345678899998878888776
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.+ .+.|+|++.|++ .++.+++|+|++|++|
T Consensus 138 --LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH~~-~~~~~~~d~i~~l~~G 213 (256)
T TIGR03873 138 --LSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-TGVTVVAALHDL-NLAASYCDHVVVLDGG 213 (256)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-cCCEEEEEeCCH-HHHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999999875 367888887766 4778899999999999
Q ss_pred eEEEEcChhHHH
Q 000753 421 QIVYQGPRDNVL 432 (1302)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1302)
+++.+|+.+++.
T Consensus 214 ~i~~~g~~~~~~ 225 (256)
T TIGR03873 214 RVVAAGPPREVL 225 (256)
T ss_pred CEEEecCHHHhh
Confidence 999999987763
No 431
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-33 Score=310.77 Aligned_cols=212 Identities=24% Similarity=0.320 Sum_probs=173.1
Q ss_pred cceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC-C-CCCccceEEECCcccCCCCc-------cceEEEEccC
Q 000753 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG-K-DLRASGKITYCGHELNEFVP-------QRTCAYISQH 253 (1302)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~-~-~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~ 253 (1302)
..++++|||+.+++||+++|+|.|||||||+.++|.|+++ + ....+|+|.++|.++-.... .+.|+||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999997 4 34567999999997654432 2589999999
Q ss_pred C--CCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccc-
Q 000753 254 D--LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDIC- 330 (1302)
Q Consensus 254 d--~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~- 330 (1302)
+ .+.|.+||.+.+.-..+...... ...+....+..+|+.+||++-
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 6 68899999998865443211000 001122345668999999863
Q ss_pred --ccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHH
Q 000753 331 --ADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETY 408 (1302)
Q Consensus 331 --~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~ 408 (1302)
.+... ..|||||||||.||.||+.+|++|+.|||||+||..++.+|++.|+++.++.+.++|+.. |...-+.
T Consensus 145 ~~~~~YP-----helSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilIT-HDl~vva 218 (316)
T COG0444 145 RRLKSYP-----HELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILIT-HDLGVVA 218 (316)
T ss_pred HHHhhCC-----cccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHH
Confidence 34444 449999999999999999999999999999999999999999999999987776666654 5566789
Q ss_pred hhcCeEEEecCCeEEEEcChhHHH
Q 000753 409 DLFDDIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 409 ~~~D~iilL~~G~iv~~G~~~~~~ 432 (1302)
++||+|+||+.|+||+.|+.+++.
T Consensus 219 ~~aDri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 219 EIADRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred HhcceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999999999874
No 432
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=2.1e-33 Score=314.94 Aligned_cols=213 Identities=24% Similarity=0.293 Sum_probs=169.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCc--CCCCCccceEEECCcccCCCCc----cceEEEEccCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKL--GKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHH 257 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~--~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 257 (1302)
+++|+|+|+.|++|++++|+|||||||||||++|+|.+ +|+ +|+|.++|+++..... +..++|++|++.++
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 46999999999999999999999999999999999995 565 9999999998754322 23489999999999
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc-cccccccc
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTMVG 336 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg 336 (1302)
+.+|++|++.+......... .+ ...+. .+....++.+++.+||+ ...++.++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~----------~~------~~~~~-----------~~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSAR----------GE------EPLDL-----------LDFLKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred CCcCHHHHHHHHHHHhhccc----------cc------ccccH-----------HHHHHHHHHHHHHcCCchhhcccccc
Confidence 99999999987543211000 00 00000 00112356788999997 45666664
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhh-cCeEE
Q 000753 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDL-FDDII 415 (1302)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~-~D~ii 415 (1302)
. .|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++... +|+++
T Consensus 143 ~----~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~vsH~~-~~~~~~~~d~i~ 216 (243)
T TIGR01978 143 E----GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-PDRSFLIITHYQ-RLLNYIKPDYVH 216 (243)
T ss_pred c----CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CCcEEEEEEecH-HHHHhhcCCeEE
Confidence 1 3999999999999999999999999999999999999999999999875 467888887776 466667 79999
Q ss_pred EecCCeEEEEcChhHHH
Q 000753 416 LLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 416 lL~~G~iv~~G~~~~~~ 432 (1302)
+|++|++++.|+++++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 217 VLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEeCCEEEEecCHHHhc
Confidence 99999999999987654
No 433
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=6.7e-34 Score=312.42 Aligned_cols=195 Identities=25% Similarity=0.349 Sum_probs=162.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC-----CccceEEEEccCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLHHG 258 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~ 258 (1302)
+++|+|+|++++||++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 45999999999999999999999999999999999999887 99999999887421 12467999999999999
Q ss_pred CCCHHHHHHhhhhc-cCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 259 EMTVRETLDFSGRC-LGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 259 ~lTVrE~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
.+||+||+.++... ++. +.+ +....++.+++.+||++..++.+.+
T Consensus 90 ~~t~~e~l~~~~~~~~~~---------------------~~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~ 135 (213)
T cd03262 90 HLTVLENITLAPIKVKGM---------------------SKA-------------EAEERALELLEKVGLADKADAYPAQ 135 (213)
T ss_pred CCcHHHHHHhHHHHhcCC---------------------CHH-------------HHHHHHHHHHHHcCCHhHhhhCccc
Confidence 99999999875321 100 000 0011245678899998888888766
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|++++|
T Consensus 136 -----LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~tvi~~sh~~-~~~~~~~d~i~~l 208 (213)
T cd03262 136 -----LSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EGMTMVVVTHEM-GFAREVADRVIFM 208 (213)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-cCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999876 367877776655 5778899999999
Q ss_pred cCCeE
Q 000753 418 SEGQI 422 (1302)
Q Consensus 418 ~~G~i 422 (1302)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 434
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.1e-33 Score=363.01 Aligned_cols=208 Identities=25% Similarity=0.435 Sum_probs=173.5
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1302)
.++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++.+|+ .
T Consensus 478 ~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~-~ 553 (694)
T TIGR03375 478 TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFY-G 553 (694)
T ss_pred ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCChhhhh-h
Confidence 35899999999999999999999999999999999999997 9999999999877653 578999999999997 4
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
|++|||.++.. +.+.++..+++...+ .+..+ -.|++..||.+|+ .+
T Consensus 554 TI~eNi~~~~~-------------------------~~~~~~i~~a~~~~~------l~~~i--~~lp~gl~T~i~e-~G 599 (694)
T TIGR03375 554 TLRDNIALGAP-------------------------YADDEEILRAAELAG------VTEFV--RRHPDGLDMQIGE-RG 599 (694)
T ss_pred hHHHHHhCCCC-------------------------CCCHHHHHHHHHHcC------hHHHH--HhCcccccceecC-CC
Confidence 99999987521 011112222222111 11122 2477889999996 46
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
..||||||||++||||++.+|++++||||||+||+.+...|.+.|+++.+ ++|+|++.|++ ++.+.||+|++|++|
T Consensus 600 ~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~--~~T~iiItHrl--~~~~~~D~iivl~~G 675 (694)
T TIGR03375 600 RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLA--GKTLVLVTHRT--SLLDLVDRIIVMDNG 675 (694)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CCEEEEEecCH--HHHHhCCEEEEEeCC
Confidence 77999999999999999999999999999999999999999999998764 68998888876 467899999999999
Q ss_pred eEEEEcChhHHHH
Q 000753 421 QIVYQGPRDNVLE 433 (1302)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1302)
+++++|+++++++
T Consensus 676 ~i~e~G~~~eLl~ 688 (694)
T TIGR03375 676 RIVADGPKDQVLE 688 (694)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999999875
No 435
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.8e-33 Score=309.06 Aligned_cols=209 Identities=19% Similarity=0.286 Sum_probs=157.3
Q ss_pred CCcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcC
Q 000753 851 QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISG 930 (1302)
Q Consensus 851 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g 930 (1302)
.|..+.++||+|.++ +.++++++++|-|.--..+||+||||.||||||++|.|..++ ..|+..-|
T Consensus 583 ~PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RKn- 647 (807)
T KOG0066|consen 583 NPPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRKN- 647 (807)
T ss_pred CCCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhcc-
Confidence 345677788877553 345789999999999999999999999999999999997763 35654422
Q ss_pred ccCChhhhcceeEEeccCCC--CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000753 931 YPKNQETFARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1302)
Q Consensus 931 ~~~~~~~~~~~~gyv~Q~~~--~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1302)
.+-.||+..|... +...-|.-|.|.-. . +.+-+ .....|-.+||...++++- ++.||
T Consensus 648 -------hrL~iG~FdQh~~E~L~~Eetp~EyLqr~----F--Nlpyq----~ARK~LG~fGL~sHAHTik----ikdLS 706 (807)
T KOG0066|consen 648 -------HRLRIGWFDQHANEALNGEETPVEYLQRK----F--NLPYQ----EARKQLGTFGLASHAHTIK----IKDLS 706 (807)
T ss_pred -------ceeeeechhhhhHHhhccccCHHHHHHHh----c--CCChH----HHHHHhhhhhhhhccceEe----eeecC
Confidence 2335888888643 44456776766421 1 12222 2456788899988888763 56899
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000753 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1302)
Q Consensus 1009 gGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~ 1088 (1302)
||||-||++|-.-++.|+||||||||++||..+...+-+.|++. ...||+++||-.+ +.+--+.++++.+.|.-..
T Consensus 707 GGQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eI 782 (807)
T KOG0066|consen 707 GGQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEI 782 (807)
T ss_pred CcchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhc
Confidence 99999999999999999999999999999999999999999886 4689999999663 5555678888887776556
Q ss_pred ecCCCcchhhH
Q 000753 1089 AGPLGHESHKL 1099 (1302)
Q Consensus 1089 ~g~~~~~~~~~ 1099 (1302)
.|...+-..++
T Consensus 783 dGdFeDYkkEV 793 (807)
T KOG0066|consen 783 DGDFEDYKKEV 793 (807)
T ss_pred cccHHHHHHHH
Confidence 66654433333
No 436
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-33 Score=315.70 Aligned_cols=206 Identities=20% Similarity=0.292 Sum_probs=165.0
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCccceEEECCcccCCC-----CccceEEEEccCCCCC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1302)
++|+|+|++|++|++++|+||||||||||+++|+|.++ |....+|+|.++|+++... ..++.++|++|++.++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 58999999999999999999999999999999999986 2112489999999887421 1246799999998888
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc----ccccc
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICADT 333 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 333 (1302)
+ .||+||+.+......... . .+ ....++.+++.+||. +..+.
T Consensus 107 ~-~tv~~nl~~~~~~~~~~~---------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 152 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEKLS---------R----------AE--------------MDERVEWALTKAALWNEVKDKLHQ 152 (260)
T ss_pred c-CcHHHHHhhhHhhcCCCC---------H----------HH--------------HHHHHHHHHHHcCCChhhHHHHhc
Confidence 7 899999987643211000 0 00 011245678888874 33455
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCe
Q 000753 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1302)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ 413 (1302)
.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++|+
T Consensus 153 ~~~~-----LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~~tiii~sH~~-~~~~~~~d~ 224 (260)
T PRK10744 153 SGYS-----LSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ--DYTVVIVTHNM-QQAARCSDY 224 (260)
T ss_pred CCCC-----CCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCCH-HHHHHhCCE
Confidence 5544 999999999999999999999999999999999999999999999853 57877777665 467789999
Q ss_pred EEEecCCeEEEEcChhHHH
Q 000753 414 IILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1302)
+++|++|+++..|+.+++.
T Consensus 225 i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 225 TAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 437
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=2.3e-33 Score=316.30 Aligned_cols=221 Identities=24% Similarity=0.300 Sum_probs=173.6
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++ ++.+|+|||++|++||++||+|+||||||||+++|+|.....+..|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 467888876542 2469999999999999999999999999999999999621113579999999875
Q ss_pred Ch---hhhcc-eeEEeccCCCCCCCCCHHHHHHHHHHhhCC----CCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000753 934 NQ---ETFAR-VSGYCEQNDIHSPYVTVYESLLYSAWLRLS----SDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGV 1004 (1302)
Q Consensus 934 ~~---~~~~~-~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~----~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 1004 (1302)
.. ...++ .++|++|++.+++.+|+.+++.+....... .+....+..+.+.++++.+++. ...++..+
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 43 12222 478999999999999999998765332110 1111223345678899999996 35555432
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh-cCeEEEEecC
Q 000753 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLLKRG 1083 (1302)
Q Consensus 1005 ~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~-~D~i~~l~~g 1083 (1302)
..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|.+
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEeC-
Confidence 249999999999999999999999999999999999999999999999877999999999975 34444 799999975
Q ss_pred cEEEEecCCC
Q 000753 1084 GRVIYAGPLG 1093 (1302)
Q Consensus 1084 G~~~~~g~~~ 1093 (1302)
|++++.|+..
T Consensus 228 G~i~~~~~~~ 237 (252)
T CHL00131 228 GKIIKTGDAE 237 (252)
T ss_pred CEEEEecChh
Confidence 8999998753
No 438
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.5e-33 Score=353.38 Aligned_cols=200 Identities=28% Similarity=0.439 Sum_probs=169.4
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCCCCCC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1302)
++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++.+... ++.++||+|++.+|+ .|
T Consensus 354 ~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~t 429 (574)
T PRK11160 354 PVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-AT 429 (574)
T ss_pred cceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-cc
Confidence 5899999999999999999999999999999999999997 9999999999877653 578999999999887 59
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCC------cccccccc
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGL------DICADTMV 335 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL------~~~~dt~v 335 (1302)
++||+.++..-. .++++ ...++..|+ ++..||.+
T Consensus 430 i~~Ni~~~~~~~----------------------~~~~i------------------~~al~~~~l~~~i~~p~GldT~v 469 (574)
T PRK11160 430 LRDNLLLAAPNA----------------------SDEAL------------------IEVLQQVGLEKLLEDDKGLNAWL 469 (574)
T ss_pred HHHHhhcCCCcc----------------------CHHHH------------------HHHHHHcCCHHHHcCccccCchh
Confidence 999998753100 01111 122222232 66789999
Q ss_pred cCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEE
Q 000753 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1302)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ii 415 (1302)
|+ .++.||||||||++||||++++|++++|||||++||+.++..|.+.|+++.+ ++|+|++.|+++ ....+|+|+
T Consensus 470 ge-~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~--~~tviiitHr~~--~~~~~d~i~ 544 (574)
T PRK11160 470 GE-GGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQ--NKTVLMITHRLT--GLEQFDRIC 544 (574)
T ss_pred cC-CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC--CCEEEEEecChh--HHHhCCEEE
Confidence 96 4667999999999999999999999999999999999999999999998854 789999888874 457799999
Q ss_pred EecCCeEEEEcChhHHHH
Q 000753 416 LLSEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 416 lL~~G~iv~~G~~~~~~~ 433 (1302)
+|++|+++..|+++++.+
T Consensus 545 ~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 545 VMDNGQIIEQGTHQELLA 562 (574)
T ss_pred EEeCCeEEEeCCHHHHHh
Confidence 999999999999998864
No 439
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=2e-34 Score=361.61 Aligned_cols=213 Identities=28% Similarity=0.434 Sum_probs=177.6
Q ss_pred CcEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCc
Q 000753 852 PLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGY 931 (1302)
Q Consensus 852 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~ 931 (1302)
...++|+|++|.++. ++++|+|+|++++|||.+||+||||||||||+++|.|..++ .+|+|.+||.
T Consensus 326 ~~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~--~~G~I~idg~ 391 (567)
T COG1132 326 IGSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDP--TSGEILIDGI 391 (567)
T ss_pred CCeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCE
Confidence 356999999997752 35699999999999999999999999999999999997663 5799999998
Q ss_pred cCC---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc-------cccccccC
Q 000753 932 PKN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-------LNDSMVGL 1001 (1302)
Q Consensus 932 ~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~~g~ 1001 (1302)
++. ...+++.++||+|++.++. -|++||+.++. .+.++ +.++++++..++.+ -.|+.+|.
T Consensus 392 dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-----~~at~----eei~~a~k~a~~~d~I~~lp~g~dt~vge 461 (567)
T COG1132 392 DIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-----PDATD----EEIEEALKLANAHEFIANLPDGYDTIVGE 461 (567)
T ss_pred ehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC-----CCCCH----HHHHHHHHHhChHHHHHhCcccccceecC
Confidence 764 4678899999999999988 89999998863 12222 23455555544333 35777774
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..+||||||||++||||++++|+||+||||||+||+.++..|++.++++. +++|+|+++|+++ ....+|++++|+
T Consensus 462 -~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~ 537 (567)
T COG1132 462 -RGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLD 537 (567)
T ss_pred -CCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEE
Confidence 345799999999999999999999999999999999999999999999877 5789999999985 456699999998
Q ss_pred cCcEEEEecCCC
Q 000753 1082 RGGRVIYAGPLG 1093 (1302)
Q Consensus 1082 ~gG~~~~~g~~~ 1093 (1302)
+ |++++.|+..
T Consensus 538 ~-G~i~e~G~h~ 548 (567)
T COG1132 538 N-GRIVERGTHE 548 (567)
T ss_pred C-CEEEEecCHH
Confidence 6 7899999864
No 440
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=318.58 Aligned_cols=214 Identities=21% Similarity=0.270 Sum_probs=171.9
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC--c-eeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g-~~~G~i~i~g 930 (1302)
.+.++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|.... . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 467888876542 24699999999999999999999999999999999996431 1 2479999999
Q ss_pred ccCC-----hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000753 931 YPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1302)
Q Consensus 931 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1302)
.++. ....++.++|++|++.+++ .|+.||+.+....+. .. ....+.+.++++.+++.+ ..+..
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 148 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLKQS--- 148 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhcCC---
Confidence 8752 2334667999999998887 499999987653321 11 122345677788888743 22222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1002 ~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.||++++|+
T Consensus 149 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~ 224 (264)
T PRK14243 149 --GLSLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFN 224 (264)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 457999999999999999999999999999999999999999999999975 589999999986 6788999999998
Q ss_pred c--------CcEEEEecCC
Q 000753 1082 R--------GGRVIYAGPL 1092 (1302)
Q Consensus 1082 ~--------gG~~~~~g~~ 1092 (1302)
+ .|++++.|+.
T Consensus 225 ~~~~~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 225 VELTEGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccccccCceEEEeCCH
Confidence 2 4899998875
No 441
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.3e-33 Score=363.16 Aligned_cols=208 Identities=27% Similarity=0.383 Sum_probs=171.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1302)
+++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|++||+++.+... ++.++||+|++.+|+.
T Consensus 487 ~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~g- 562 (708)
T TIGR01193 487 SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFSG- 562 (708)
T ss_pred CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecCceehhH-
Confidence 35899999999999999999999999999999999999997 9999999999876643 5789999999999975
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
||+|||.++.+. +.+.++..+++...+. +..+ -.|++..||.||+ .+
T Consensus 563 TI~eNi~l~~~~------------------------~~~~~~i~~a~~~a~l------~~~i--~~lp~gldt~i~e-~G 609 (708)
T TIGR01193 563 SILENLLLGAKE------------------------NVSQDEIWAACEIAEI------KDDI--ENMPLGYQTELSE-EG 609 (708)
T ss_pred HHHHHHhccCCC------------------------CCCHHHHHHHHHHhCC------HHHH--HhcccccCcEecC-CC
Confidence 999999885211 0011112222221111 1122 2477889999986 56
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
..||||||||++||||++.+|++|+||||||+||+.+...+.+.|+++ .++|+|++.|.+ ++.+.+|+|++|++|
T Consensus 610 ~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T~IiitHr~--~~~~~~D~i~~l~~G 684 (708)
T TIGR01193 610 SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKTIIFVAHRL--SVAKQSDKIIVLDHG 684 (708)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCEEEEEecch--HHHHcCCEEEEEECC
Confidence 779999999999999999999999999999999999999999999874 268988888876 467899999999999
Q ss_pred eEEEEcChhHHHH
Q 000753 421 QIVYQGPRDNVLE 433 (1302)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1302)
+++.+|+++++.+
T Consensus 685 ~i~~~G~~~~L~~ 697 (708)
T TIGR01193 685 KIIEQGSHDELLD 697 (708)
T ss_pred EEEEECCHHHHHh
Confidence 9999999999864
No 442
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=317.77 Aligned_cols=208 Identities=20% Similarity=0.301 Sum_probs=166.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCccceEEECCcccCCC-----CccceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1302)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|. ...+|+|.++|+++... ..++.++|++|++.+
T Consensus 32 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 111 (267)
T PRK14235 32 KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNP 111 (267)
T ss_pred EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCC
Confidence 35999999999999999999999999999999999998641 11389999999887531 124679999999888
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc----ccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CAD 332 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~d 332 (1302)
++. ||.||+.|+....+... +..+ ....++.+++.+||.+ ..+
T Consensus 112 ~~~-tv~enl~~~~~~~~~~~------------------~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 158 (267)
T PRK14235 112 FPK-SIYENVAYGPRIHGLAR------------------SKAE--------------LDEIVETSLRKAGLWEEVKDRLH 158 (267)
T ss_pred CCC-cHHHHHHHHHHhccccc------------------chHH--------------HHHHHHHHHHHcCCchhhhHHhh
Confidence 875 99999988643221100 0000 0112456788889864 234
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++..++|
T Consensus 159 ~~~~~-----LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~~tiiivtH~~-~~~~~~~d 230 (267)
T PRK14235 159 EPGTG-----LSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--NYTIVIVTHSM-QQAARVSQ 230 (267)
T ss_pred CCccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--CCeEEEEEcCH-HHHHhhCC
Confidence 55544 999999999999999999999999999999999999999999999865 57887777665 57778999
Q ss_pred eEEEecCCeEEEEcChhHHH
Q 000753 413 DIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1302)
++++|++|+++.+|+.+++.
T Consensus 231 ~v~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 231 RTAFFHLGNLVEVGDTEKMF 250 (267)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 443
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.5e-33 Score=307.77 Aligned_cols=199 Identities=22% Similarity=0.287 Sum_probs=166.7
Q ss_pred EeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC-ccceEEEEccCCCCCCCCCHHH
Q 000753 186 ILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-PQRTCAYISQHDLHHGEMTVRE 264 (1302)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTVrE 264 (1302)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 467999999999999999999999999999999999887 999999999875432 3467999999999999999999
Q ss_pred HHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCC
Q 000753 265 TLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGIS 344 (1302)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLS 344 (1302)
|+.+...... . ... .....++.+++.+||++..++.+.+ ||
T Consensus 90 n~~~~~~~~~-~-------------------~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-K-------------------LNA--------------EQQEKVVDAAQQVGIADYLDRLPEQ-----LS 130 (213)
T ss_pred HHHhHhhccC-C-------------------ccH--------------HHHHHHHHHHHHcCcHHHhhCCccc-----CC
Confidence 9976432100 0 000 0011245688999998888888766 99
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCeEEE
Q 000753 345 GGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVY 424 (1302)
Q Consensus 345 GGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~iv~ 424 (1302)
||||||++||+|++.+|++++|||||+|||..++..+.+.|+++.+..+.|+|++.|++ .++.+++|++++|++|+++.
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~-~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHL-SDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHhhcCeEEEEECCeEEE
Confidence 99999999999999999999999999999999999999999998765567888777665 47778999999999999998
Q ss_pred EcC
Q 000753 425 QGP 427 (1302)
Q Consensus 425 ~G~ 427 (1302)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 875
No 444
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=3.9e-32 Score=347.98 Aligned_cols=211 Identities=27% Similarity=0.393 Sum_probs=173.7
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1302)
..++|+|++|.++.. +++.+|+|+|++|+|||++||+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 477 ~~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~--p~~G~I~idg~~ 544 (711)
T TIGR00958 477 GLIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQ--PTGGQVLLDGVP 544 (711)
T ss_pred CeEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccC--CCCCEEEECCEE
Confidence 468999999987521 12469999999999999999999999999999999999766 347999999988
Q ss_pred CC---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000753 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-------DSMVGLP 1002 (1302)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 1002 (1302)
+. ...+++.++||+|++.+++ .|++||+.++. .+.+ ++.++++++..++.+.. |+.+|..
T Consensus 545 i~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~-----~~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~ 614 (711)
T TIGR00958 545 LVQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL-----TDTP----DEEIMAAAKAANAHDFIMEFPNGYDTEVGEK 614 (711)
T ss_pred HHhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC-----CCCC----HHHHHHHHHHcCCHHHHHhCCCccCCcccCC
Confidence 64 3567788999999999885 69999998752 1222 23467888888876543 4445543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
..+||||||||++|||||+++|+||+||||||+||+.++..+++ .. ..+++|+|++||+++ ..+.+|++++|++
T Consensus 615 -G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~IivL~~ 688 (711)
T TIGR00958 615 -GSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQILVLKK 688 (711)
T ss_pred -CCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999998 22 235899999999975 5678999999985
Q ss_pred CcEEEEecCC
Q 000753 1083 GGRVIYAGPL 1092 (1302)
Q Consensus 1083 gG~~~~~g~~ 1092 (1302)
|++++.|+.
T Consensus 689 -G~ive~Gt~ 697 (711)
T TIGR00958 689 -GSVVEMGTH 697 (711)
T ss_pred -CEEEEeeCH
Confidence 899999985
No 445
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=6.6e-34 Score=322.05 Aligned_cols=212 Identities=22% Similarity=0.305 Sum_probs=172.8
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.+.++|+++.++. +...+|+|||++|++||++||+|+||||||||+++|+|... .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 3678888876631 12359999999999999999999999999999999999764 369999999876
Q ss_pred Ch---hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccC------CCC
Q 000753 934 NQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGL------PGV 1004 (1302)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~------~~~ 1004 (1302)
.. ..+++.++||+|++.+++. |++||+.... ... .+.++++++.++|.+..+...+. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~~-tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFSG-TFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccchh-hHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 42 3456789999999999874 9999995321 111 23467888999998766554321 123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000753 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1302)
Q Consensus 1005 ~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG 1084 (1302)
..||+|||||++|||||+.+|+||+|||||+|||+.+...+++.|++.. .++|||+++|+++ ....||++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~--~i~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE--AMLECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH--HHHhCCEEEEecC-C
Confidence 5699999999999999999999999999999999999999999999875 4899999999975 3456999999985 7
Q ss_pred EEEEecCCCc
Q 000753 1085 RVIYAGPLGH 1094 (1302)
Q Consensus 1085 ~~~~~g~~~~ 1094 (1302)
++++.|++.+
T Consensus 213 ~i~~~g~~~~ 222 (275)
T cd03289 213 KVRQYDSIQK 222 (275)
T ss_pred eEeecCCHHH
Confidence 9999998643
No 446
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-34 Score=305.49 Aligned_cols=196 Identities=27% Similarity=0.437 Sum_probs=171.3
Q ss_pred ceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC-------ccceEEEEccCCCCCCCCC
Q 000753 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-------PQRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 261 (1302)
++++..+.-.+|||-|+||||||||+|+|+|+..|+ +|.|.+||..+.+.. .+|.+|||+|+..+||++|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 577777765799999999999999999999999998 999999998764321 2588999999999999999
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
|+-||.|+...- .....|.+...||++|..+.....
T Consensus 93 VrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~R~P~~---- 128 (352)
T COG4148 93 VRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLDRYPGT---- 128 (352)
T ss_pred Eecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHhhCCCc----
Confidence 999999974321 011246788999999999999887
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
|||||||||+|||||++.|++|+||||.+.||-....+|+-+|.+++++.+.-++... |-..|+.+++|+|++|++|+
T Consensus 129 -LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~~IPIlYVS-HS~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 129 -LSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEINIPILYVS-HSLDEVLRLADRVVVLENGK 206 (352)
T ss_pred -cCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhcCCCEEEEe-cCHHHHHhhhheEEEecCCe
Confidence 9999999999999999999999999999999999999999999999988766666554 55679999999999999999
Q ss_pred EEEEcChhHHHH
Q 000753 422 IVYQGPRDNVLE 433 (1302)
Q Consensus 422 iv~~G~~~~~~~ 433 (1302)
+...|+.+++..
T Consensus 207 V~A~g~~e~v~~ 218 (352)
T COG4148 207 VKASGPLEEVWG 218 (352)
T ss_pred EEecCcHHHHhc
Confidence 999999998753
No 447
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=324.51 Aligned_cols=211 Identities=20% Similarity=0.308 Sum_probs=168.8
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCccceEEECCcccCCC-----CccceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1302)
.++|+|+|++|++|++++|+|||||||||||++|+|..++. ...+|+|.++|+++... ..++.++||+|++++
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35899999999999999999999999999999999998531 12389999999988532 235689999999998
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccccccccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 336 (1302)
++ .||+||+.|+....+.. .. +. ....++.+++.++|.+..++.++
T Consensus 175 ~~-~ti~eNi~~~~~~~~~~----------~~----------~~-------------~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 FE-MSIFDNVAYGPRNNGIN----------DR----------KI-------------LEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred CC-CcHHHHHHhHHHhcCCC----------hH----------HH-------------HHHHHHHHHHHcCCcchhhhhhh
Confidence 85 79999999864321100 00 00 01123456777777655555554
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEE
Q 000753 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1302)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iil 416 (1302)
+ .+..|||||||||+||||++.+|+|++|||||+|||+.+...+.++|+++.+ +.|+|++.|++ ..+.+.+|+|++
T Consensus 221 ~-~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~~Tii~iTH~l-~~i~~~~Driiv 296 (329)
T PRK14257 221 K-AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--KYSIIIVTHSM-AQAQRISDETVF 296 (329)
T ss_pred C-CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--CCEEEEEeCCH-HHHHHhCCEEEE
Confidence 3 4556999999999999999999999999999999999999999999998875 57888777765 467788999999
Q ss_pred ecCCeEEEEcChhHHH
Q 000753 417 LSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 417 L~~G~iv~~G~~~~~~ 432 (1302)
|++|+++..|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999999874
No 448
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.3e-33 Score=380.48 Aligned_cols=214 Identities=26% Similarity=0.399 Sum_probs=174.3
Q ss_pred cceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--------------------------------------
Q 000753 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD-------------------------------------- 224 (1302)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~-------------------------------------- 224 (1302)
..+||+|+|++|+||+.+||+||||||||||+++|.|.++|.
T Consensus 1180 ~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1259 (1466)
T PTZ00265 1180 NVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFS 1259 (1466)
T ss_pred CCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccc
Confidence 346999999999999999999999999999999999999972
Q ss_pred -------------CCccceEEECCcccCCCC---ccceEEEEccCCCCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHH
Q 000753 225 -------------LRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRR 288 (1302)
Q Consensus 225 -------------~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~ 288 (1302)
...+|+|++||+++.+.. .++.++||+|++.+|+ .||+|||.|+..
T Consensus 1260 ~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTIreNI~~g~~----------------- 1321 (1466)
T PTZ00265 1260 LTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSIYENIKFGKE----------------- 1321 (1466)
T ss_pred cccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccHHHHHhcCCC-----------------
Confidence 014899999999987765 3678999999999995 699999998622
Q ss_pred HHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeC
Q 000753 289 EKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDE 368 (1302)
Q Consensus 289 e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDE 368 (1302)
+.+.++..+++..++. .+. +..|++.+||.||+ .+..||||||||++|||||+++|+||+|||
T Consensus 1322 --------~at~eeI~~A~k~A~l-----~~f---I~~LP~GydT~VGe-~G~~LSGGQkQRIaIARALlr~p~ILLLDE 1384 (1466)
T PTZ00265 1322 --------DATREDVKRACKFAAI-----DEF---IESLPNKYDTNVGP-YGKSLSGGQKQRIAIARALLREPKILLLDE 1384 (1466)
T ss_pred --------CCCHHHHHHHHHHcCC-----HHH---HHhCccccCCccCC-CCCcCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 0111122222222211 122 23589999999995 556699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecC----CeEE-EEcChhHHHH
Q 000753 369 ISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE----GQIV-YQGPRDNVLE 433 (1302)
Q Consensus 369 ptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~----G~iv-~~G~~~~~~~ 433 (1302)
|||+||+.+...|.+.|+++....++|+|++.|++ ++.+.+|+|++|++ |+++ .+|+++++++
T Consensus 1385 aTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRl--sti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~ 1452 (1466)
T PTZ00265 1385 ATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRI--ASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLS 1452 (1466)
T ss_pred cccccCHHHHHHHHHHHHHHhccCCCEEEEEechH--HHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHh
Confidence 99999999999999999987532378988888776 67789999999999 9955 8999999863
No 449
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=315.53 Aligned_cols=215 Identities=23% Similarity=0.332 Sum_probs=172.5
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCC--Cce--eEEEEEEcC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GGY--IEGDIKISG 930 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~g~--~~G~i~i~g 930 (1302)
+.++|+++.+ +++.+|+||||++.+||+++|+|+||||||||+++|+|... .|. +.|++.++|
T Consensus 11 i~~~~~~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g 77 (257)
T PRK14246 11 FNISRLYLYI-------------NDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFG 77 (257)
T ss_pred eeeeeEEEec-------------CCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECC
Confidence 6777776544 34569999999999999999999999999999999999654 232 236666666
Q ss_pred ccCC---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----cccccccCCC
Q 000753 931 YPKN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGLPG 1003 (1302)
Q Consensus 931 ~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~~~ 1003 (1302)
.+.. ....++.++|++|++.+++.+|++||+.+...... ....++..+.+.++++.+++.+ ..+..
T Consensus 78 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----- 150 (257)
T PRK14246 78 KDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP----- 150 (257)
T ss_pred cccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC-----
Confidence 6542 23356779999999999999999999988643221 1122334456889999999864 23332
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000753 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1302)
Q Consensus 1004 ~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~g 1083 (1302)
+..||+|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+...||++++|++
T Consensus 151 ~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~- 227 (257)
T PRK14246 151 ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN- 227 (257)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC-
Confidence 457999999999999999999999999999999999999999999999864 699999999976 46678999999985
Q ss_pred cEEEEecCC
Q 000753 1084 GRVIYAGPL 1092 (1302)
Q Consensus 1084 G~~~~~g~~ 1092 (1302)
|+++..|+.
T Consensus 228 g~i~~~g~~ 236 (257)
T PRK14246 228 GELVEWGSS 236 (257)
T ss_pred CEEEEECCH
Confidence 799888875
No 450
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-33 Score=313.36 Aligned_cols=208 Identities=19% Similarity=0.289 Sum_probs=166.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 260 (1302)
+.+|+|+|+++++|++++|+||||||||||+++|+|.+++....+|+|+++|+++.... .++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 45999999999999999999999999999999999997531123899999999876532 2467999999998887 6
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc----ccccccc
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CADTMVG 336 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt~vg 336 (1302)
||+||+.++...++.. ...+ .....++.+++.+||.. ..+..+
T Consensus 94 tv~eni~~~~~~~~~~-------------------~~~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~~~- 140 (246)
T PRK14269 94 SIYENISYAPKLHGMI-------------------KNKD-------------EEEALVVDCLQKVGLFEEVKDKLKQNA- 140 (246)
T ss_pred cHHHHhhhHHhhcCcc-------------------cChH-------------HHHHHHHHHHHHcCCChhhhHHhcCCc-
Confidence 9999998864322100 0000 00112456788889853 234433
Q ss_pred CccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEE
Q 000753 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1302)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iil 416 (1302)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|++++.|++ .++.+++|++++
T Consensus 141 ----~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~tH~~-~~~~~~~d~i~~ 213 (246)
T PRK14269 141 ----LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH--NLSMIMVTHNM-QQGKRVADYTAF 213 (246)
T ss_pred ----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEecCH-HHHHhhCcEEEE
Confidence 45999999999999999999999999999999999999999999999864 67878777665 577889999999
Q ss_pred ecCCeEEEEcChhHHH
Q 000753 417 LSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 417 L~~G~iv~~G~~~~~~ 432 (1302)
|++|++++.|+.+++.
T Consensus 214 l~~G~i~~~g~~~~~~ 229 (246)
T PRK14269 214 FHLGELIEFGESKEFF 229 (246)
T ss_pred EECCEEEEECCHHHHH
Confidence 9999999999988764
No 451
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-33 Score=315.66 Aligned_cols=207 Identities=19% Similarity=0.311 Sum_probs=165.7
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCccceEEECCcccCCC-----CccceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1302)
+++|+|+|++|++|++++|+|||||||||||++|+|.++ |+...+|+|+++|+++... ..++.++|++|++.+
T Consensus 25 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 104 (259)
T PRK14274 25 HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNP 104 (259)
T ss_pred eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCcc
Confidence 358999999999999999999999999999999999986 3222489999999987431 124679999999988
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc----ccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CAD 332 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~d 332 (1302)
++. ||+||+.|..+..+... +.+ ....++.+++.+||.+ ..+
T Consensus 105 ~~~-tv~enl~~~~~~~~~~~-------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~l~ 150 (259)
T PRK14274 105 FPQ-SIFDNVAYGPRIHGTKN-------------------KKK--------------LQEIVEKSLKDVALWDEVKDRLH 150 (259)
T ss_pred ccc-CHHHHHHhHHHhcCCCC-------------------HHH--------------HHHHHHHHHHHcCCchhhhhhhh
Confidence 875 99999987543211000 000 0112345677888753 234
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
+.++ .|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. +.|+|++.|++ .++.+++|
T Consensus 151 ~~~~-----~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiivtH~~-~~~~~~~d 222 (259)
T PRK14274 151 TQAL-----SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE--KYTIVIVTHNM-QQAARVSD 222 (259)
T ss_pred CCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--CCEEEEEEcCH-HHHHHhCC
Confidence 5554 4999999999999999999999999999999999999999999999864 57888887765 47788999
Q ss_pred eEEEecCCeEEEEcChhHHH
Q 000753 413 DIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1302)
++++|++|+++.+|+++++.
T Consensus 223 ~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 223 QTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred EEEEEECCEEEEECCHHHHh
Confidence 99999999999999998764
No 452
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=314.86 Aligned_cols=218 Identities=22% Similarity=0.313 Sum_probs=172.6
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCC--C-ceeEEEEEEcCc
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKISGY 931 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i~g~ 931 (1302)
+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|.
T Consensus 4 l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~ 70 (250)
T PRK14266 4 IEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGV 70 (250)
T ss_pred EEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCE
Confidence 56777765442 3469999999999999999999999999999999999642 1 124799999998
Q ss_pred cCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000753 932 PKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSG 1006 (1302)
Q Consensus 932 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 1006 (1302)
++.. ...++.++|++|++.+++. |+.||+.+...... ....+...+.+.++++.+++.+....... ..+..
T Consensus 71 ~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~ 146 (250)
T PRK14266 71 DIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLD-KSALG 146 (250)
T ss_pred EcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHh-CCccc
Confidence 7532 2346679999999988875 99999987643221 11223344667889999988542111111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEE
Q 000753 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1302)
Q Consensus 1007 LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~ 1086 (1302)
||+|||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ |+|||++||++. ++...+|++++|.+ |++
T Consensus 147 LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~i 223 (250)
T PRK14266 147 LSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GEI 223 (250)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-CeE
Confidence 999999999999999999999999999999999999999999999864 899999999986 67788899999975 799
Q ss_pred EEecCC
Q 000753 1087 IYAGPL 1092 (1302)
Q Consensus 1087 ~~~g~~ 1092 (1302)
++.|+.
T Consensus 224 ~~~g~~ 229 (250)
T PRK14266 224 IESGLT 229 (250)
T ss_pred EEeCCH
Confidence 998875
No 453
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-33 Score=315.48 Aligned_cols=208 Identities=22% Similarity=0.322 Sum_probs=167.0
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC--CccceEEECCcccCCC-----CccceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL--RASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1302)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (258)
T PRK14241 17 FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNP 96 (258)
T ss_pred EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEcccccc
Confidence 359999999999999999999999999999999999986421 1389999999886421 224679999999999
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc----cccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 332 (1302)
++.+||+||+.++....+.. +..+ ....++.+++.+||. +..+
T Consensus 97 ~~~~tv~~nl~~~~~~~~~~-------------------~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 143 (258)
T PRK14241 97 FPTMSIRDNVVAGLKLNGVR-------------------NKKD--------------LDELVEKSLRGANLWNEVKDRLD 143 (258)
T ss_pred CCCCcHHHHHHHHHHhcCCC-------------------CHHH--------------HHHHHHHHHHHcCCchhhhhHhh
Confidence 99999999998764321100 0000 011245677888874 3445
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 144 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tviivsH~~-~~~~~~~d 215 (258)
T PRK14241 144 KPGGG-----LSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--DYTIVIVTHNM-QQAARVSD 215 (258)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEEecCH-HHHHHhCC
Confidence 55554 999999999999999999999999999999999999999999999864 57877777665 57788999
Q ss_pred eEEEec------CCeEEEEcChhHHH
Q 000753 413 DIILLS------EGQIVYQGPRDNVL 432 (1302)
Q Consensus 413 ~iilL~------~G~iv~~G~~~~~~ 432 (1302)
+|++|+ +|++++.|+++++.
T Consensus 216 ~i~~l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 216 QTAFFNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EEEEEecccCCCCceEEecCCHHHHH
Confidence 999997 79999999988764
No 454
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-33 Score=313.26 Aligned_cols=208 Identities=20% Similarity=0.284 Sum_probs=167.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCccceEEECCcccCCC-----CccceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1302)
+++|+|+|++|++|++++|+|||||||||||++|+|.++ |+...+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 459999999999999999999999999999999999985 3212389999999887432 225679999999999
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc----ccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CAD 332 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~d 332 (1302)
++.+||+||+.++.+..+... ..+ ....++.+++.+||.. ..+
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~-------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 143 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRVN-------------------RSE--------------ADEIVESSLKRVALWDEVKDRLK 143 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCCC-------------------HHH--------------HHHHHHHHHHHcCCchhhhHHhh
Confidence 999999999987533211000 000 0112456778888854 234
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 144 ~~~~~-----LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~~tiiivsH~~-~~~~~~~d 215 (252)
T PRK14256 144 SNAME-----LSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--KYTIIIVTHNM-QQAARVSD 215 (252)
T ss_pred CCcCc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCcEEEEECCH-HHHHhhCC
Confidence 44544 999999999999999999999999999999999999999999999975 46777777765 47789999
Q ss_pred eEEEecCCeEEEEcChhHHH
Q 000753 413 DIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1302)
++++|++|+++..|+.+++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 216 YTAFFYMGDLVECGETKKIF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988763
No 455
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-33 Score=313.47 Aligned_cols=207 Identities=18% Similarity=0.315 Sum_probs=166.5
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCccceEEECCcccCCC-----CccceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1302)
+.+|+|+|+++++|++++|+|||||||||||++|+|..+|. ...+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 35899999999999999999999999999999999998641 12489999999987532 124679999999988
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc----cccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 332 (1302)
++ +|++||+.|.....+.... .+ ....++.+++.+||. +..+
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~-------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 142 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIKDK-------------------KE--------------LDKIVEWALKKAALWDEVKDDLK 142 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCCcH-------------------HH--------------HHHHHHHHHHHcCCchhhhhHhh
Confidence 87 8999999886432211000 00 011234567788874 2345
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
+.+++ |||||||||+||++++.+|++++|||||+|||+.++.++.+.|+++.+ +.|+|++.|++ .++.+++|
T Consensus 143 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~~tiiivsH~~-~~~~~~~d 214 (251)
T PRK14270 143 KSALK-----LSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--EYTIVIVTHNM-QQASRVSD 214 (251)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CCeEEEEEcCH-HHHHHhcC
Confidence 55544 999999999999999999999999999999999999999999999875 47877777765 57888999
Q ss_pred eEEEecCCeEEEEcChhHHH
Q 000753 413 DIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1302)
++++|++|++++.|+.+++.
T Consensus 215 ~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 215 YTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred EEEEEECCeEEEeCCHHHHh
Confidence 99999999999999998864
No 456
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-33 Score=307.53 Aligned_cols=192 Identities=29% Similarity=0.422 Sum_probs=161.7
Q ss_pred ceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCC-------CccceEEEEccCCCCCCCCC
Q 000753 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------VPQRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 261 (1302)
|+|+++++ ++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999887 99999999876421 12457999999999999999
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
++||+.+...... .. .....++.+++.+||++..++.+++
T Consensus 92 ~~~~l~~~~~~~~------------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~---- 131 (214)
T cd03297 92 VRENLAFGLKRKR------------NR------------------------EDRISVDELLDLLGLDHLLNRYPAQ---- 131 (214)
T ss_pred HHHHHHHHHhhCC------------HH------------------------HHHHHHHHHHHHcCCHhHhhcCccc----
Confidence 9999987532100 00 0011245678899998877777766
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|++|+
T Consensus 132 -LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~-~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 132 -LSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDL-SEAEYLADRIVVMEDGR 209 (214)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCH-HHHHHhcCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999999775577887777665 56778999999999999
Q ss_pred EEEEc
Q 000753 422 IVYQG 426 (1302)
Q Consensus 422 iv~~G 426 (1302)
++.+|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98875
No 457
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1e-33 Score=312.64 Aligned_cols=195 Identities=26% Similarity=0.415 Sum_probs=158.9
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh---hhhcceeEEeccCCCCCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYVT 956 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 956 (1302)
+.+|+|+|++|++|++++|+||||||||||+++|+|... +..|+|.++|.+... ...++.++|++|++.+++ .|
T Consensus 17 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 93 (220)
T cd03245 17 IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIRQLDPADLRRNIGYVPQDVTLFY-GT 93 (220)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhHHCCHHHHHhhEEEeCCCCcccc-ch
Confidence 459999999999999999999999999999999999765 347999999986532 234567999999998776 69
Q ss_pred HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccccccccc------CCCCCCCCHHHHHHHHHHHHHhhCCCCccc
Q 000753 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVG------LPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1302)
Q Consensus 957 v~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g------~~~~~~LSgGqrqRl~iA~aL~~~P~illL 1030 (1302)
+.||+.+... ... ...+.++++.+++.+..+.... ...+..||||||||++|||+|+.+|++|+|
T Consensus 94 v~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~llll 164 (220)
T cd03245 94 LRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLL 164 (220)
T ss_pred HHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999876421 111 1235678888888776655321 112458999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000753 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1302)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g 1090 (1302)
||||+|||+.++..+++.|++++++ +|||++||+++ ..+.+|++++|++ |++++.|
T Consensus 165 DEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~--~~~~~d~v~~l~~-g~i~~~~ 220 (220)
T cd03245 165 DEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS--LLDLVDRIIVMDS-GRIVADG 220 (220)
T ss_pred eCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH--HHHhCCEEEEEeC-CeEeecC
Confidence 9999999999999999999998764 89999999976 3478999999986 7776643
No 458
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=5.1e-33 Score=314.40 Aligned_cols=207 Identities=23% Similarity=0.356 Sum_probs=168.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcc-----cCCCCc-------cceEEEEc
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHE-----LNEFVP-------QRTCAYIS 251 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~-----~~~~~~-------~~~~~yv~ 251 (1302)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~ 95 (258)
T PRK11701 19 RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVH 95 (258)
T ss_pred ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEe
Confidence 35999999999999999999999999999999999999887 9999999987 554321 34699999
Q ss_pred cCCC--CCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc
Q 000753 252 QHDL--HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI 329 (1302)
Q Consensus 252 Q~d~--~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 329 (1302)
|++. +++.+|+.||+.+.....+.. +.++ ....++.+++.+|+.+
T Consensus 96 q~~~~~~~~~~~~~~~i~~~~~~~~~~-------------------~~~~--------------~~~~~~~~l~~~~l~~ 142 (258)
T PRK11701 96 QHPRDGLRMQVSAGGNIGERLMAVGAR-------------------HYGD--------------IRATAGDWLERVEIDA 142 (258)
T ss_pred eCcccccCccccHHHHHHHHHHHhccC-------------------cHHH--------------HHHHHHHHHHHcCCCh
Confidence 9973 677789999997632110000 0000 0112456788999974
Q ss_pred -cccccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHH
Q 000753 330 -CADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETY 408 (1302)
Q Consensus 330 -~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~ 408 (1302)
..++.+++ |||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++++..+.|+|++.|++ .++.
T Consensus 143 ~~~~~~~~~-----LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~-~~~~ 216 (258)
T PRK11701 143 ARIDDLPTT-----FSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDL-AVAR 216 (258)
T ss_pred hHHhCCCcc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCH-HHHH
Confidence 56777765 9999999999999999999999999999999999999999999998765577887777665 5777
Q ss_pred hhcCeEEEecCCeEEEEcChhHHH
Q 000753 409 DLFDDIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 409 ~~~D~iilL~~G~iv~~G~~~~~~ 432 (1302)
+++|+|++|++|++++.|+++++.
T Consensus 217 ~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 217 LLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHh
Confidence 899999999999999999988764
No 459
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-33 Score=316.05 Aligned_cols=206 Identities=18% Similarity=0.281 Sum_probs=163.1
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC--CccceEEECCcccCCC-----CccceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL--RASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1302)
..+|+|+|++|++|++++|+|||||||||||++|+|.+++.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 26 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 105 (269)
T PRK14259 26 FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNP 105 (269)
T ss_pred EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCcc
Confidence 358999999999999999999999999999999999986310 1389999999876421 124579999999988
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc----cccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 332 (1302)
++ .||+||+.+.+...+.. + +. ...++.+++.+++. +..+
T Consensus 106 ~~-~tv~enl~~~~~~~~~~---~------------------~~--------------~~~~~~~l~~~~l~~~l~~~~~ 149 (269)
T PRK14259 106 FP-KSIYENIAFGARINGYT---G------------------DM--------------DELVERSLRKAAVWDECKDKLN 149 (269)
T ss_pred ch-hhHHHHHhhhhhhcCCc---H------------------HH--------------HHHHHHHHHHhCCcchhhhhhC
Confidence 88 49999998865432110 0 00 01123456666653 3345
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
+.+.+ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 150 ~~~~~-----LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~~tiiivtH~~-~~~~~~~d 221 (269)
T PRK14259 150 ESGYS-----LSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK--NFTIVIVTHNM-QQAVRVSD 221 (269)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEEeCCH-HHHHHhcC
Confidence 55544 999999999999999999999999999999999999999999999854 57777776665 58889999
Q ss_pred eEEEecC-----------CeEEEEcChhHHHH
Q 000753 413 DIILLSE-----------GQIVYQGPRDNVLE 433 (1302)
Q Consensus 413 ~iilL~~-----------G~iv~~G~~~~~~~ 433 (1302)
++++|++ |++++.|+++++.+
T Consensus 222 ~i~~l~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 222 MTAFFNAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred EEEEEeccccccccccccceEEEeCCHHHHHh
Confidence 9999996 67899999988753
No 460
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=312.94 Aligned_cols=207 Identities=20% Similarity=0.285 Sum_probs=166.0
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCccceEEECCcccCCC-----CccceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. ...+|+|.++|+++... ..++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 35899999999999999999999999999999999998641 12489999999987532 124679999999888
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccc----cc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDIC----AD 332 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~----~d 332 (1302)
++ .||+||+.++.+..+.. ...+ ....+..+++.+||.++ .+
T Consensus 113 ~~-~tv~eni~~~~~~~~~~-------------------~~~~--------------~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 113 FA-KSIYENITFALERAGVK-------------------DKKV--------------LDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCC-------------------CHHH--------------HHHHHHHHHHHcCCCchhhhhhc
Confidence 87 69999998864321100 0000 01124557888888543 34
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
..+ +.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.++||
T Consensus 159 ~~~-----~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tiii~tH~~-~~~~~~~d 230 (267)
T PRK14237 159 KSA-----LTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK--NYTIIIVTHNM-QQAARASD 230 (267)
T ss_pred CCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--CCEEEEEecCH-HHHHHhcC
Confidence 444 44999999999999999999999999999999999999999999999853 57888777765 47889999
Q ss_pred eEEEecCCeEEEEcChhHHH
Q 000753 413 DIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1302)
++++|++|++++.|+.+++.
T Consensus 231 ~i~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 231 YTAFFYLGDLIEYDKTRNIF 250 (267)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999998764
No 461
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2e-33 Score=316.89 Aligned_cols=214 Identities=26% Similarity=0.308 Sum_probs=170.5
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc--
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP-- 932 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~-- 932 (1302)
+.++|+++.++ ...+|+|||++|++|++++|+|+||||||||+++|+|... +.+|+|.++|.+
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (253)
T TIGR02323 4 LQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSGA 68 (253)
T ss_pred EEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEeccccc
Confidence 67777776542 2458999999999999999999999999999999999765 347999999876
Q ss_pred ---CCh---hh----hcceeEEeccCCC--CCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCc-ccccccc
Q 000753 933 ---KNQ---ET----FARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMV 999 (1302)
Q Consensus 933 ---~~~---~~----~~~~~gyv~Q~~~--~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~ 999 (1302)
... .. .++.++|++|++. +.+.+|+.||+.+..... .. .......+.++++++.+++. ...+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~- 145 (253)
T TIGR02323 69 ELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL- 145 (253)
T ss_pred ccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC-
Confidence 321 11 2346899999975 445679999986543211 10 11123345678999999996 355554
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEE
Q 000753 1000 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELL 1078 (1302)
Q Consensus 1000 g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~ 1078 (1302)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |.|||+++|+++ .+.+.+|+++
T Consensus 146 ----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~~ 220 (253)
T TIGR02323 146 ----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRLL 220 (253)
T ss_pred ----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEE
Confidence 4579999999999999999999999999999999999999999999998654 899999999976 5666899999
Q ss_pred EEecCcEEEEecCC
Q 000753 1079 LLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1079 ~l~~gG~~~~~g~~ 1092 (1302)
+|++ |++++.|+.
T Consensus 221 ~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 221 VMQQ-GRVVESGLT 233 (253)
T ss_pred EEEC-CEEEEECCH
Confidence 9985 789988874
No 462
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.1e-34 Score=327.64 Aligned_cols=202 Identities=26% Similarity=0.398 Sum_probs=170.8
Q ss_pred cceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCCCC
Q 000753 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGE 259 (1302)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 259 (1302)
+.++|+|+|+++++||.+||+|++|||||||++.|+|-++|+ +|+|+.||.++..... ++.+++++|...+|.
T Consensus 350 ~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~- 425 (573)
T COG4987 350 QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQRVHLFS- 425 (573)
T ss_pred ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhccchHHHH-
Confidence 446999999999999999999999999999999999999998 9999999998876554 568999999888886
Q ss_pred CCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCC-------ccccc
Q 000753 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGL-------DICAD 332 (1302)
Q Consensus 260 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL-------~~~~d 332 (1302)
-|+|+||.++.. +...++. -.+++..|| ++..|
T Consensus 426 ~Tlr~NL~lA~~-------------------------~AsDEel---------------~~aL~qvgL~~l~~~~p~gl~ 465 (573)
T COG4987 426 GTLRDNLRLANP-------------------------DASDEEL---------------WAALQQVGLEKLLESAPDGLN 465 (573)
T ss_pred HHHHHHHhhcCC-------------------------CCCHHHH---------------HHHHHHcCHHHHHHhChhhhh
Confidence 599999987632 1111111 123333443 45778
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
|.+|+ .+++||||||||++|||+|++++++++|||||.|||+.|..++++.|.+-++ |+|++++.|+-. -.+.||
T Consensus 466 t~lge-~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~--~kTll~vTHrL~--~le~~d 540 (573)
T COG4987 466 TWLGE-GGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE--GKTLLMVTHRLR--GLERMD 540 (573)
T ss_pred chhcc-CCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc--CCeEEEEecccc--cHhhcC
Confidence 99995 6788999999999999999999999999999999999999999999987664 899999888754 357899
Q ss_pred eEEEecCCeEEEEcChhHHHH
Q 000753 413 DIILLSEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~~ 433 (1302)
+|++|++|+++++|.+.+++.
T Consensus 541 rIivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 541 RIIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred EEEEEECCeeeecCCHHhhhc
Confidence 999999999999999999874
No 463
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=5.2e-33 Score=313.49 Aligned_cols=206 Identities=23% Similarity=0.283 Sum_probs=167.3
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC-CccceEEECCcccCCCCc-cceEEEEccCCC--CCCCC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL-RASGKITYCGHELNEFVP-QRTCAYISQHDL--HHGEM 260 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~-~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~l 260 (1302)
++|+|+|+++++|++++|+||||||||||+++|+|.++|.. ..+|+|.++|+++..... ++.++||+|++. +.+.+
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~ 96 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLH 96 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccc
Confidence 48999999999999999999999999999999999998710 138999999998754322 357999999974 45667
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc---cccccccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI---CADTMVGD 337 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~dt~vg~ 337 (1302)
|+.+++.+.++..+.. . ....+..+++.+||.+ ..++.+++
T Consensus 97 ~~~~~~~~~~~~~~~~---------------------~---------------~~~~~~~~l~~~~l~~~~~~~~~~~~~ 140 (254)
T PRK10418 97 TMHTHARETCLALGKP---------------------A---------------DDATLTAALEAVGLENAARVLKLYPFE 140 (254)
T ss_pred cHHHHHHHHHHHcCCC---------------------h---------------HHHHHHHHHHHcCCCChhhhhhcCCcc
Confidence 9999986643211100 0 0012456788999976 34666655
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|++++.|++ .++.+++|++++|
T Consensus 141 -----LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~-~~~~~~~d~v~~l 214 (254)
T PRK10418 141 -----MSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDM-GVVARLADDVAVM 214 (254)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998765577888887765 4677899999999
Q ss_pred cCCeEEEEcChhHHH
Q 000753 418 SEGQIVYQGPRDNVL 432 (1302)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1302)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 215 SHGRIVEQGDVETLF 229 (254)
T ss_pred ECCEEEEecCHHHHh
Confidence 999999999988764
No 464
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-33 Score=314.06 Aligned_cols=205 Identities=19% Similarity=0.267 Sum_probs=168.3
Q ss_pred ccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChhhhcceeEEeccCCCCCCCCCH
Q 000753 878 DRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTV 957 (1302)
Q Consensus 878 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 957 (1302)
..+.+|++||++|++||++||+||||||||||+++|+|..+ +..|+|.++|. ++++.|+..+.+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~--p~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLS--PTVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCE----------EeEEecccCCCCCCcH
Confidence 34679999999999999999999999999999999999765 34799999984 3567777777788999
Q ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 000753 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1302)
Q Consensus 958 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgL 1037 (1302)
.||+.+..... ....++..+.++++++.+++.+..+.. +..||+|||||++||+||+.+|++|||||||+||
T Consensus 103 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gL 174 (264)
T PRK13546 103 IENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQP-----VKKYSSGMRAKLGFSINITVNPDILVIDEALSVG 174 (264)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----cccCCHHHHHHHHHHHHHhhCCCEEEEeCccccC
Confidence 99998754332 122344445677889999998777665 4579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCcchhhHHHHHH
Q 000753 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFE 1104 (1302)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~~~~~~~~~f~ 1104 (1302)
|+.+...+++.|+++.+.|+|||++||++. ++.+.+|++++|++ |++++.|+..+......+||.
T Consensus 175 D~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~i~~~g~~~~~~~~~~~~~~ 239 (264)
T PRK13546 175 DQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GKLKDYGELDDVLPKYEAFLN 239 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CEEEEeCCHHHHHHHhHHHHH
Confidence 999999999999998777999999999975 56678999999985 789988886433333333333
No 465
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=6.6e-34 Score=317.94 Aligned_cols=196 Identities=29% Similarity=0.414 Sum_probs=153.8
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC---hhhhcceeEEeccCCCCCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN---QETFARVSGYCEQNDIHSPYVT 956 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lT 956 (1302)
+.+|+|+||++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.. ....++.++|++|++.+++ .|
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-GT 92 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-hh
Confidence 459999999999999999999999999999999999765 34799999997753 2234567999999988776 69
Q ss_pred HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccccccc-------ccCCCCCCCCHHHHHHHHHHHHHhhCCCCcc
Q 000753 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSM-------VGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1029 (1302)
Q Consensus 957 v~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~-------~g~~~~~~LSgGqrqRl~iA~aL~~~P~ill 1029 (1302)
|+||+.+.... ...+. +.+.++..++.+..+.. .. ..+..||||||||++||++|+.+|++|+
T Consensus 93 v~e~l~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~la~al~~~p~lll 162 (238)
T cd03249 93 IAENIRYGKPD-----ATDEE----VEEAAKKANIHDFIMSLPDGYDTLVG-ERGSQLSGGQKQRIAIARALLRNPKILL 162 (238)
T ss_pred HHHHhhccCCC-----CCHHH----HHHHHHHcChHHHHHhhccccceeec-cCCccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999764211 11111 22333333332211111 11 1246899999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1030 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
|||||+|||+.++..+++.|+++. +|+|||++||+++ ++ +.||++++|.+ |++++.|+.
T Consensus 163 lDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 221 (238)
T cd03249 163 LDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQVVEQGTH 221 (238)
T ss_pred EeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999987 7999999999975 34 58999999986 789888874
No 466
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=312.24 Aligned_cols=207 Identities=18% Similarity=0.284 Sum_probs=163.2
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCccceEEECCcccCCC-----CccceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1302)
.++|+|+|+++++|++++|+|||||||||||++|+|..+ +....+|+|.++|+++... ..++.++|++|++.+
T Consensus 34 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 113 (268)
T PRK14248 34 KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVVNLRREIGMVFQKPNP 113 (268)
T ss_pred ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHHHHhccEEEEecCCcc
Confidence 358999999999999999999999999999999999864 1111389999999987532 124579999999988
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc----cccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 332 (1302)
++. ||+||+.+.....+.. .... ....+...++.+++. +..+
T Consensus 114 ~~~-tv~enl~~~~~~~~~~-------------------~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 159 (268)
T PRK14248 114 FPK-SIYNNITHALKYAGER-------------------RKSV--------------LDEIVEESLTKAALWDEVKDRLH 159 (268)
T ss_pred Ccc-cHHHHHHHHHHhcCCC-------------------cHHH--------------HHHHHHHHHHHcCCCcchHHHHh
Confidence 875 9999998753221100 0000 011234456677774 2345
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
+.+++ ||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 160 ~~~~~-----LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tiii~tH~~-~~~~~~~d 231 (268)
T PRK14248 160 SSALS-----LSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--EYSIIIVTHNM-QQALRVSD 231 (268)
T ss_pred cCccc-----CCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--CCEEEEEEeCH-HHHHHhCC
Confidence 55554 999999999999999999999999999999999999999999999864 57887777765 47888999
Q ss_pred eEEEecCCeEEEEcChhHHH
Q 000753 413 DIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1302)
+|++|++|++++.|+.+++.
T Consensus 232 ~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 232 RTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 467
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-33 Score=330.60 Aligned_cols=219 Identities=26% Similarity=0.388 Sum_probs=186.6
Q ss_pred cccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh----hhhcceeEEeccCCC
Q 000753 875 VGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQNDI 950 (1302)
Q Consensus 875 ~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~ 950 (1302)
+.++..++|+||||++++||++||+|.||||||||+|+|+|... +.+|+|.++|.+... +.....|+.|.|+..
T Consensus 16 K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~ 93 (500)
T COG1129 16 KSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKPVAFSSPRDALAAGIATVHQELS 93 (500)
T ss_pred EEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEEccCCCHHHHHhCCcEEEeechh
Confidence 34556789999999999999999999999999999999999765 458999999987532 344567999999999
Q ss_pred CCCCCCHHHHHHHHHHhhC-CCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcc
Q 000753 951 HSPYVTVYESLLYSAWLRL-SSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1029 (1302)
Q Consensus 951 ~~~~lTv~E~l~~~~~lr~-~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~ill 1029 (1302)
+.|++||.||+.++...+. ..-++.+...+...++|+.+++....++.+ .+||.||||.|.|||||..+++||+
T Consensus 94 L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v-----~~LsiaqrQ~VeIArAl~~~arllI 168 (500)
T COG1129 94 LVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLV-----GDLSIAQRQMVEIARALSFDARVLI 168 (500)
T ss_pred ccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhh-----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999988765543 233566677788899999999964356664 4799999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC-CCc-chhhHHHH
Q 000753 1030 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP-LGH-ESHKLIEY 1102 (1302)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~-~~~-~~~~~~~~ 1102 (1302)
||||||.|+......+.+.++++.++|.+||++||.++ ++++.||++.+|.+ |+++...+ ..+ ..+++++.
T Consensus 169 lDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v~~~~~~~~~~~~~lv~~ 241 (500)
T COG1129 169 LDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVVGTRPTAAETSEDELVRL 241 (500)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEeeecccccCCCHHHHHHH
Confidence 99999999999999999999999999999999999997 89999999999985 78888888 344 33444443
No 468
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-33 Score=313.39 Aligned_cols=206 Identities=19% Similarity=0.262 Sum_probs=165.4
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCc---CCCCCccceEEECCcccCCC-----CccceEEEEccCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKL---GKDLRASGKITYCGHELNEF-----VPQRTCAYISQHDL 255 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~---~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~ 255 (1302)
+++|+|+|+++++|++++|+||||||||||+++|+|.. ++. ..+|+|.++|+++... ..++.++|++|++.
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 45999999999999999999999999999999999973 331 1389999999987542 12457999999998
Q ss_pred CCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccc----c
Q 000753 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDIC----A 331 (1302)
Q Consensus 256 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~----~ 331 (1302)
+++ .||+||+.++.+..+... .+ .....++.+++.+||.+. .
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~~~--------------------~~-------------~~~~~~~~~l~~~~l~~~~~~~~ 140 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGVKD--------------------NA-------------FIRQRVEETLKGAALWDEVKDKL 140 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCCCc--------------------HH-------------HHHHHHHHHHHHcCCCcchhhhh
Confidence 887 699999987643221100 00 001124567888898643 3
Q ss_pred cccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhc
Q 000753 332 DTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLF 411 (1302)
Q Consensus 332 dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~ 411 (1302)
+..++ .|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++
T Consensus 141 ~~~~~-----~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiivtH~~-~~~~~~~ 212 (250)
T PRK14245 141 KESAF-----ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKK--DYTIVIVTHNM-QQAARVS 212 (250)
T ss_pred hCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCCH-HHHHhhC
Confidence 44444 4999999999999999999999999999999999999999999999853 67888877665 4778999
Q ss_pred CeEEEecCCeEEEEcChhHHH
Q 000753 412 DDIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 412 D~iilL~~G~iv~~G~~~~~~ 432 (1302)
|++++|++|+++++|+++++.
T Consensus 213 d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 213 DKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred CEEEEEECCEEEEECCHHHHh
Confidence 999999999999999998874
No 469
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-34 Score=315.44 Aligned_cols=211 Identities=25% Similarity=0.390 Sum_probs=163.4
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|+++.++ +.+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYD------------EKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYD--PQKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecC------------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCEeH
Confidence 356777776542 12359999999999999999999999999999999999765 3479999999865
Q ss_pred Ch---hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccc-c-----CCCC
Q 000753 934 NQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMV-G-----LPGV 1004 (1302)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-g-----~~~~ 1004 (1302)
.. ..+++.++|++|++.+++. |++||+.+... .... ..+.+.++.+++.+..+... + ...+
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NATD----EEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCCH----HHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 32 3456679999999988775 99999976421 1111 12344455554443322211 0 0124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000753 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1302)
Q Consensus 1005 ~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG 1084 (1302)
..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||++||+++ ++ +.||++++|.+ |
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~~-g 213 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLDD-G 213 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEeC-C
Confidence 6899999999999999999999999999999999999999999999986 5899999999985 34 56999999985 7
Q ss_pred EEEEecCC
Q 000753 1085 RVIYAGPL 1092 (1302)
Q Consensus 1085 ~~~~~g~~ 1092 (1302)
++++.|+.
T Consensus 214 ~~~~~~~~ 221 (229)
T cd03254 214 KIIEEGTH 221 (229)
T ss_pred eEEEeCCH
Confidence 88887763
No 470
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=8.7e-34 Score=357.88 Aligned_cols=211 Identities=24% Similarity=0.356 Sum_probs=177.8
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1302)
..++|+|++|.++. ++.+|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEE
Confidence 46899999998741 13599999999999999999999999999999999997763 47999999987
Q ss_pred CC---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000753 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-------DSMVGLP 1002 (1302)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 1002 (1302)
++ ...+++.++||+|++.+++. |++||+.++. +.+ ++.++++++.+++.+.. |+.+|..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 64 35678899999999999886 9999998752 122 23478888888876543 4445543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
..+||||||||++|||||+++|+||+||||||+||+.+++.|++.|+++.+ ++|||++||+++ ....||++++|++
T Consensus 474 -g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~~ 549 (592)
T PRK10790 474 -GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLHR 549 (592)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999864 799999999974 5678999999985
Q ss_pred CcEEEEecCCC
Q 000753 1083 GGRVIYAGPLG 1093 (1302)
Q Consensus 1083 gG~~~~~g~~~ 1093 (1302)
|+++..|+..
T Consensus 550 -G~i~~~G~~~ 559 (592)
T PRK10790 550 -GQAVEQGTHQ 559 (592)
T ss_pred -CEEEEEcCHH
Confidence 8999999853
No 471
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-34 Score=317.57 Aligned_cols=195 Identities=26% Similarity=0.348 Sum_probs=156.4
Q ss_pred eeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC---hhhhcceeEEeccCCCCCCCCCH
Q 000753 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN---QETFARVSGYCEQNDIHSPYVTV 957 (1302)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lTv 957 (1302)
.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. ....++.++|++|++.+++ .||
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv 92 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DTV 92 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-ccH
Confidence 59999999999999999999999999999999999765 34799999997653 2344667999999998876 699
Q ss_pred HHHHHHHHHhhCCCCCcHHHH-----HHHHHHHHHHc--CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccc
Q 000753 958 YESLLYSAWLRLSSDVDTKKR-----KMFVDEVMELV--ELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1302)
Q Consensus 958 ~E~l~~~~~lr~~~~~~~~~~-----~~~v~~~l~~l--~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illL 1030 (1302)
+||+.+.... ...... ...+++.++.+ ++....+.. +..||+|||||++|||||+.+|++|+|
T Consensus 93 ~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllL 162 (234)
T cd03251 93 AENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GVKLSGGQRQRIAIARALLKDPPILIL 162 (234)
T ss_pred HHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999775321 111111 11234445544 444444433 457999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000753 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~ 1092 (1302)
||||+|||+.+...+.+.|+++. +|+|||++||+++ ++ ..||++++|.+ |++++.|+.
T Consensus 163 DEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (234)
T cd03251 163 DEATSALDTESERLVQAALERLM-KNRTTFVIAHRLS-TI-ENADRIVVLED-GKIVERGTH 220 (234)
T ss_pred eCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEecC-CeEeeeCCH
Confidence 99999999999999999999986 4899999999985 34 45999999986 788888764
No 472
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-34 Score=290.96 Aligned_cols=212 Identities=28% Similarity=0.402 Sum_probs=184.7
Q ss_pred cccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCC
Q 000753 181 KRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHH 257 (1302)
Q Consensus 181 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~ 257 (1302)
...+.||+|+|..|++|.+|+++|||||||||||.+++.+++.+ +|+|+++|+++..... .+.++.+-|+....
T Consensus 11 y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d---~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~ 87 (252)
T COG4604 11 YGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKD---SGEITIDGLELTSTPSKELAKKLSILKQENHIN 87 (252)
T ss_pred hCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcccc---CceEEEeeeecccCChHHHHHHHHHHHhhchhh
Confidence 35678999999999999999999999999999999999999988 9999999999876643 36788889998888
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
..+||||-+.|+.- +-++-++. .+....++..++.|+|++..|....+
T Consensus 88 ~rlTV~dLv~FGRf---PYSqGRlt-----------------------------~eD~~~I~~aieyl~L~~l~dryLd~ 135 (252)
T COG4604 88 SRLTVRDLVGFGRF---PYSQGRLT-----------------------------KEDRRIINEAIEYLHLEDLSDRYLDE 135 (252)
T ss_pred heeEHHHHhhcCCC---cccCCCCc-----------------------------hHHHHHHHHHHHHhcccchHHHhHHh
Confidence 89999999999732 11111110 12234578889999999999998876
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
||||||||.-||+.++.+.+.++||||.+.||...+.++++.||++++++++|+++++|.- ...-.++|.|+-|
T Consensus 136 -----LSGGQrQRAfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDI-NfAS~YsD~IVAl 209 (252)
T COG4604 136 -----LSGGQRQRAFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDI-NFASCYSDHIVAL 209 (252)
T ss_pred -----cccchhhhhhhheeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecc-cHHHhhhhheeee
Confidence 9999999999999999999999999999999999999999999999999999999998765 4677899999999
Q ss_pred cCCeEEEEcChhHHHH
Q 000753 418 SEGQIVYQGPRDNVLE 433 (1302)
Q Consensus 418 ~~G~iv~~G~~~~~~~ 433 (1302)
.+|+++.+|+++++.+
T Consensus 210 K~G~vv~~G~~~eii~ 225 (252)
T COG4604 210 KNGKVVKQGSPDEIIQ 225 (252)
T ss_pred cCCEEEecCCHHHhcC
Confidence 9999999999999864
No 473
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.1e-33 Score=309.03 Aligned_cols=185 Identities=29% Similarity=0.368 Sum_probs=156.0
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChhhhcceeEEeccCCCCCCCCCHHH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1302)
+.+|+|+||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.+......++.++|++|++.+++.+|+.|
T Consensus 15 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~tv~~ 92 (207)
T PRK13539 15 RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDIDDPDVAEACHYLGHRNAMKPALTVAE 92 (207)
T ss_pred eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCcchhhHhhcEEecCCCcCCCCCcHHH
Confidence 469999999999999999999999999999999999765 347999999987532225667899999988888999999
Q ss_pred HHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCH
Q 000753 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1302)
Q Consensus 960 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~ 1039 (1302)
|+.+....+. .. .+.+.++++.++|.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 93 ~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~ 160 (207)
T PRK13539 93 NLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLP-----FGYLSAGQKRRVALARLLVSNRPIWILDEPTAALDA 160 (207)
T ss_pred HHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCH
Confidence 9987543321 11 13478999999998766655 347999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1040 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1040 ~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
.+...+++.|++++++|+|||++||++. .... |+++.+.
T Consensus 161 ~~~~~l~~~l~~~~~~~~tiii~sH~~~--~~~~-~~~~~~~ 199 (207)
T PRK13539 161 AAVALFAELIRAHLAQGGIVIAATHIPL--GLPG-ARELDLG 199 (207)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCCch--hhcc-CcEEeec
Confidence 9999999999998778999999999975 3344 8887764
No 474
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-33 Score=312.83 Aligned_cols=207 Identities=21% Similarity=0.294 Sum_probs=164.6
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCccceEEECCcccCCC-----CccceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.+
T Consensus 18 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 97 (252)
T PRK14239 18 KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNP 97 (252)
T ss_pred eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCcc
Confidence 358999999999999999999999999999999999853 4222489999999887421 224679999999988
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc----ccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CAD 332 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~d 332 (1302)
++ +||+||+.++....+... ... ....++.+++.+|+.. ..+
T Consensus 98 ~~-~tv~enl~~~~~~~~~~~-------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 143 (252)
T PRK14239 98 FP-MSIYENVVYGLRLKGIKD-------------------KQV--------------LDEAVEKSLKGASIWDEVKDRLH 143 (252)
T ss_pred Cc-CcHHHHHHHHHHHcCCCc-------------------HHH--------------HHHHHHHHHHHcCCchhHHHHHh
Confidence 87 899999987643221100 000 0112345677777643 234
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
..+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++|
T Consensus 144 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~~sH~~-~~~~~~~d 215 (252)
T PRK14239 144 DSALG-----LSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--DYTMLLVTRSM-QQASRISD 215 (252)
T ss_pred cCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--CCeEEEEECCH-HHHHHhCC
Confidence 55544 999999999999999999999999999999999999999999999864 57877777665 47888999
Q ss_pred eEEEecCCeEEEEcChhHHH
Q 000753 413 DIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1302)
+|++|++|++++.|+.+++.
T Consensus 216 ~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 216 RTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988864
No 475
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-33 Score=331.49 Aligned_cols=203 Identities=21% Similarity=0.294 Sum_probs=165.3
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChhhhcceeEEeccCCCCCCCCCHHH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1302)
+.+|+||||+|++|+++||+||||||||||+++|+|... +.+|+|.++|.+. ++.+...+.+.+|++|
T Consensus 37 ~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~--P~sGeI~I~G~~~----------~i~~~~~l~~~lTV~E 104 (549)
T PRK13545 37 HYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTM--PNKGTVDIKGSAA----------LIAISSGLNGQLTGIE 104 (549)
T ss_pred ceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCceEEEECCEee----------eEEeccccCCCCcHHH
Confidence 469999999999999999999999999999999999765 3479999998641 1223345567799999
Q ss_pred HHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCH
Q 000753 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1302)
Q Consensus 960 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~ 1039 (1302)
++.+..... ....++..+.+.++++.+++.+..++. +..||||||||++|||||+.+|++|||||||+|||+
T Consensus 105 nL~l~~~~~---~~~~~e~~e~i~elLe~lgL~~~ld~~-----~~~LSGGQrQRVaLArAL~~~P~LLLLDEPTsgLD~ 176 (549)
T PRK13545 105 NIELKGLMM---GLTKEKIKEIIPEIIEFADIGKFIYQP-----VKTYSSGMKSRLGFAISVHINPDILVIDEALSVGDQ 176 (549)
T ss_pred HHHhhhhhc---CCCHHHHHHHHHHHHHHcCChhHhhCC-----cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCH
Confidence 998754332 122334445678899999998877776 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCcchhhHHHHHH
Q 000753 1040 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFE 1104 (1302)
Q Consensus 1040 ~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~~~~~~~~~~f~ 1104 (1302)
.++..+++.|++++++|+|||++||+++ ++...||++++|.+ |++++.|++.+.......|++
T Consensus 177 ~sr~~LlelL~el~~~G~TIIIVSHdl~-~i~~l~DrIivL~~-GkIv~~G~~~el~~~~~~~~~ 239 (549)
T PRK13545 177 TFTKKCLDKMNEFKEQGKTIFFISHSLS-QVKSFCTKALWLHY-GQVKEYGDIKEVVDHYDEFLK 239 (549)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCHHHHHhhHHHHHH
Confidence 9999999999998877999999999986 56778999999985 789999876433333334444
No 476
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-33 Score=298.89 Aligned_cols=157 Identities=30% Similarity=0.451 Sum_probs=141.2
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh--hhhcceeEEeccCCCCCCCCCH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1302)
..+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+|+
T Consensus 13 ~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (173)
T cd03230 13 KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKKEPEEVKRRIGYLPEEPSLYENLTV 90 (173)
T ss_pred eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcccchHhhhccEEEEecCCccccCCcH
Confidence 359999999999999999999999999999999999765 347999999987542 2345679999999998888999
Q ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 000753 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1302)
Q Consensus 958 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgL 1037 (1302)
.||+. ||||||||++|||||+.+|++|+|||||+||
T Consensus 91 ~~~~~--------------------------------------------LS~G~~qrv~laral~~~p~illlDEPt~~L 126 (173)
T cd03230 91 RENLK--------------------------------------------LSGGMKQRLALAQALLHDPELLILDEPTSGL 126 (173)
T ss_pred HHHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCC
Confidence 99873 8999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000753 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1302)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~g 1083 (1302)
|+.++..+.+.|++++++|.|||++||+++ ++.+.+|++++|++|
T Consensus 127 D~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 127 DPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999877899999999986 566789999999863
No 477
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=4.2e-33 Score=308.50 Aligned_cols=210 Identities=23% Similarity=0.294 Sum_probs=164.3
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEc--Cc-
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKIS--GY- 931 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~--g~- 931 (1302)
+.++|+++.++.... ..+++.+|+|+|++|++||+++|+|+||||||||+++|+|... +..|+|.++ |.
T Consensus 2 l~~~~l~~~~~~~~~------~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~~~g~~ 73 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQ------GGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYL--PDSGRILVRHEGAW 73 (224)
T ss_pred EEEEeeEEEeecccC------CCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEEecCCCc
Confidence 456777765531100 0012469999999999999999999999999999999999765 347999998 42
Q ss_pred -cCC---hhh---h-cceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCC
Q 000753 932 -PKN---QET---F-ARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLP 1002 (1302)
Q Consensus 932 -~~~---~~~---~-~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~ 1002 (1302)
+.. ... . ++.+||++|++.+++.+||.|++.+..... ........+.+.++++.+++.+. .+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 146 (224)
T TIGR02324 74 VDLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLP---- 146 (224)
T ss_pred cchhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCC----
Confidence 321 111 1 356999999999999999999998754322 12223344567889999999753 3444
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEe
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~ 1081 (1302)
+..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||++. .+...+|+++.+.
T Consensus 147 -~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 147 -PATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 4579999999999999999999999999999999999999999999999877999999999964 3556899988763
No 478
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1e-32 Score=304.41 Aligned_cols=196 Identities=24% Similarity=0.376 Sum_probs=165.6
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1302)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQ---EGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLL 94 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhc
Confidence 56999999999999999999999999999999999999887 999999999875432 246799999999999
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccC
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1302)
+.+|+.||+.++......- +.. +....++.+++.+||.+..++.+.+
T Consensus 95 ~~~t~~~n~~~~~~~~~~~-------------------~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~ 141 (220)
T TIGR02982 95 GFLTARQNVQMALELQPNL-------------------SYQ--------------EARERARAMLEAVGLGDHLDYYPHN 141 (220)
T ss_pred CCCCHHHHHHHHHHhccCC-------------------CHH--------------HHHHHHHHHHHHcCChhhhhcChhh
Confidence 9899999998864321100 000 0112346688999998888887765
Q ss_pred ccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEe
Q 000753 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1302)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL 417 (1302)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+..++|+|++.|++. +.+++|+|++|
T Consensus 142 -----lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l 214 (220)
T TIGR02982 142 -----LSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHM 214 (220)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEE
Confidence 99999999999999999999999999999999999999999999987655789999988873 56899999999
Q ss_pred cCCeE
Q 000753 418 SEGQI 422 (1302)
Q Consensus 418 ~~G~i 422 (1302)
++|++
T Consensus 215 ~~g~~ 219 (220)
T TIGR02982 215 EDGKL 219 (220)
T ss_pred ECCEE
Confidence 99986
No 479
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=9.5e-34 Score=355.04 Aligned_cols=212 Identities=27% Similarity=0.428 Sum_probs=177.7
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1302)
..++|+|++|.++. +++.+|+|+|++++|||++||+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~--p~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWD--PQQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 46999999987741 12359999999999999999999999999999999999765 347999999987
Q ss_pred CC---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccc------cccccCCC
Q 000753 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN------DSMVGLPG 1003 (1302)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~------~~~~g~~~ 1003 (1302)
+. ...+++.++||+|++.+++ .|++||+.++. .+. .++.++++++.+++.+.. |+.+|. +
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~-----~~~----~~~~i~~al~~~~l~~~i~~p~GldT~vge-~ 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA-----PNA----SDEALIEVLQQVGLEKLLEDDKGLNAWLGE-G 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC-----Ccc----CHHHHHHHHHHcCCHHHHcCccccCchhcC-C
Confidence 64 3567788999999998886 59999998752 122 234478899999987654 344443 2
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000753 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1302)
Q Consensus 1004 ~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~g 1083 (1302)
...||||||||++|||||+++|++|+||||||+||+.+++.+++.|+++. +++|+|+++|+++ ....+|++++|++
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~~- 548 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMDN- 548 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEeC-
Confidence 45799999999999999999999999999999999999999999999986 5899999999985 4567999999985
Q ss_pred cEEEEecCC
Q 000753 1084 GRVIYAGPL 1092 (1302)
Q Consensus 1084 G~~~~~g~~ 1092 (1302)
|++++.|+.
T Consensus 549 G~i~~~g~~ 557 (574)
T PRK11160 549 GQIIEQGTH 557 (574)
T ss_pred CeEEEeCCH
Confidence 899999874
No 480
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-33 Score=314.19 Aligned_cols=216 Identities=22% Similarity=0.282 Sum_probs=173.0
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC--c-eeEEEEEEc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIKIS 929 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g-~~~G~i~i~ 929 (1302)
..+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ + +.+|+|.++
T Consensus 15 ~~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~ 81 (265)
T PRK14252 15 QKSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILH 81 (265)
T ss_pred ceEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEc
Confidence 3478888886552 24699999999999999999999999999999999997542 1 257999999
Q ss_pred CccCC-------hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcc----ccccc
Q 000753 930 GYPKN-------QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSM 998 (1302)
Q Consensus 930 g~~~~-------~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~ 998 (1302)
|.+.. ...+++.++|++|++.+++. |++||+.+...... .. .....++.+.++++.+++.+ ..+..
T Consensus 82 g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~-~~-~~~~~~~~~~~~l~~~~l~~~l~~~~~~~ 158 (265)
T PRK14252 82 PDNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRG-VK-RRSILEERVENALRNAALWDEVKDRLGDL 158 (265)
T ss_pred CccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcC-CC-hHHHHHHHHHHHHHHcCCchhhhHHHhCC
Confidence 87542 12346679999999988886 99999987643221 11 11222355778888888742 22333
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEE
Q 000753 999 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELL 1078 (1302)
Q Consensus 999 ~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~ 1078 (1302)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.||+++
T Consensus 159 -----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~ 231 (265)
T PRK14252 159 -----AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTA 231 (265)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999999875 699999999986 5667899999
Q ss_pred EEecCcEEEEecCC
Q 000753 1079 LLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1079 ~l~~gG~~~~~g~~ 1092 (1302)
+|++ |+++..|+.
T Consensus 232 ~l~~-G~i~~~g~~ 244 (265)
T PRK14252 232 YMYM-GELIEFGAT 244 (265)
T ss_pred EEEC-CEEEEeCCH
Confidence 9985 889888874
No 481
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=4.3e-33 Score=313.35 Aligned_cols=219 Identities=26% Similarity=0.311 Sum_probs=168.0
Q ss_pred EEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCC
Q 000753 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1302)
Q Consensus 855 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1302)
+.++|+++.++ ++.+|+|+|++|++|++++|+|+||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 45677765442 34699999999999999999999999999999999997311135799999998753
Q ss_pred h---hh-hcceeEEeccCCCCCCCCCHHHHHHHHHH-hhC--C-CCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000753 935 Q---ET-FARVSGYCEQNDIHSPYVTVYESLLYSAW-LRL--S-SDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVS 1005 (1302)
Q Consensus 935 ~---~~-~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~-lr~--~-~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~ 1005 (1302)
. .. .++.++|++|++.+++.+|+.+++.+... ++. . .........+.++++++.+++. +..+..+ ..
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NV 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CC
Confidence 2 11 23469999999988888887776543211 110 0 0011122345678889999984 3444432 12
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh-cCeEEEEecCc
Q 000753 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLLKRGG 1084 (1302)
Q Consensus 1006 ~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~-~D~i~~l~~gG 1084 (1302)
.||||||||++|||||+.+|+||+|||||+|||+.++..+.+.|+++++.|+|||++||+++ .+... +|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~~-g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLYQ-G 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999999877899999999975 34444 799999975 7
Q ss_pred EEEEecCC
Q 000753 1085 RVIYAGPL 1092 (1302)
Q Consensus 1085 ~~~~~g~~ 1092 (1302)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 89998875
No 482
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-33 Score=312.30 Aligned_cols=208 Identities=18% Similarity=0.305 Sum_probs=165.9
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCccceEEECCcccCCC-----CccceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1302)
+++|+|+|++|++|++++|+||||||||||+++|+|..+ |....+|+|+++|.++... ..++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 469999999999999999999999999999999999976 2112489999999876432 124679999999988
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCccc----cc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDIC----AD 332 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~----~d 332 (1302)
++. ||+||+.+.....+... ... .....++.+++.+||.+. .+
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~-------------------~~~-------------~~~~~~~~~l~~~~l~~~~~~~~~ 144 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAK-------------------NKK-------------KLDEIVEKSLTSVGLWEELGDRLK 144 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCC-------------------CHH-------------HHHHHHHHHHHHcCCCchhhhHhh
Confidence 885 99999987532211100 000 001124567888998653 33
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
..+ +.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++. ++.+++|
T Consensus 145 ~~~-----~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiiisH~~~-~~~~~~d 216 (251)
T PRK14244 145 DSA-----FELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKK--NFTIIVVTHSMK-QAKKVSD 216 (251)
T ss_pred cCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCCHH-HHHhhcC
Confidence 444 44999999999999999999999999999999999999999999999853 688888877764 7778999
Q ss_pred eEEEecCCeEEEEcChhHHH
Q 000753 413 DIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1302)
+|++|++|++++.|+.+++.
T Consensus 217 ~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 217 RVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999987764
No 483
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.5e-33 Score=276.27 Aligned_cols=202 Identities=25% Similarity=0.362 Sum_probs=175.7
Q ss_pred CCcccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC-------ccceEEEEc
Q 000753 179 SKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-------PQRTCAYIS 251 (1302)
Q Consensus 179 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~ 251 (1302)
......+||++|++.|++||-++|+|||||||||||-+|+|+-.|+ +|+|.+.|+++.... ..+.+|+|+
T Consensus 18 ~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVF 94 (228)
T COG4181 18 QGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVF 94 (228)
T ss_pred CCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEE
Confidence 3445788999999999999999999999999999999999999887 999999999986553 136899999
Q ss_pred cCCCCCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccc
Q 000753 252 QHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICA 331 (1302)
Q Consensus 252 Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 331 (1302)
|.-.++|+||..||+...+.++|...+ + ........|+.+||.+..
T Consensus 95 QSF~Lip~ltAlENV~lPleL~ge~~~----------------------~------------~~~~A~~lL~~vGLg~Rl 140 (228)
T COG4181 95 QSFHLIPNLTALENVALPLELRGESSA----------------------D------------SRAGAKALLEAVGLGKRL 140 (228)
T ss_pred EeeeccccchhhhhccchhhhcCCccc----------------------c------------HHHHHHHHHHHhCccccc
Confidence 999999999999999887666553211 0 011234578999999998
Q ss_pred cccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhc
Q 000753 332 DTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLF 411 (1302)
Q Consensus 332 dt~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~ 411 (1302)
+...+. |||||+|||+||||+...|+|||-||||-.||..|..+|.+.|-.+.++.|.|.|+..|.|. ...-|
T Consensus 141 ~HyP~q-----LSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc 213 (228)
T COG4181 141 THYPAQ-----LSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARC 213 (228)
T ss_pred ccCccc-----cCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhh
Confidence 888876 99999999999999999999999999999999999999999999999888999998888764 66789
Q ss_pred CeEEEecCCeEEE
Q 000753 412 DDIILLSEGQIVY 424 (1302)
Q Consensus 412 D~iilL~~G~iv~ 424 (1302)
||++-|.+|+++.
T Consensus 214 ~R~~r~~~G~l~~ 226 (228)
T COG4181 214 DRQLRLRSGRLVE 226 (228)
T ss_pred hheeeeecceecc
Confidence 9999999999874
No 484
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.8e-34 Score=328.30 Aligned_cols=212 Identities=25% Similarity=0.381 Sum_probs=178.9
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1302)
.++++|++++++.+ ..++|+|+|+++++||.+||+|+||||||||+..|+|..+ +.+|+|.++|.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 68999999887632 3469999999999999999999999999999999999655 3489999999875
Q ss_pred C---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccc-------cccCCC
Q 000753 934 N---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDS-------MVGLPG 1003 (1302)
Q Consensus 934 ~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~-------~~g~~~ 1003 (1302)
. ...+++.+++++|...+|. -|+++||.++. .+.+ ++.++++++.+||+++... .+|+ +
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF~-~Tlr~NL~lA~-----~~As----DEel~~aL~qvgL~~l~~~~p~gl~t~lge-~ 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLFS-GTLRDNLRLAN-----PDAS----DEELWAALQQVGLEKLLESAPDGLNTWLGE-G 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHHH-HHHHHHHhhcC-----CCCC----HHHHHHHHHHcCHHHHHHhChhhhhchhcc-C
Confidence 3 3446778999999887764 59999997652 2332 3458899999999876543 3444 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000753 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1302)
Q Consensus 1004 ~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~g 1083 (1302)
...||||||||++|||+|++|.++++|||||.|||+.+++.|++.|.+.++ |+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 567999999999999999999999999999999999999999999998874 999999999974 5688999999985
Q ss_pred cEEEEecCCC
Q 000753 1084 GRVIYAGPLG 1093 (1302)
Q Consensus 1084 G~~~~~g~~~ 1093 (1302)
|++++.|..+
T Consensus 548 Gkiie~G~~~ 557 (573)
T COG4987 548 GKIIEEGTHA 557 (573)
T ss_pred CeeeecCCHH
Confidence 8999999864
No 485
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=1.8e-33 Score=305.33 Aligned_cols=184 Identities=24% Similarity=0.305 Sum_probs=154.1
Q ss_pred cceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh--hhhcceeEEeccCCCCCCCCC
Q 000753 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVT 956 (1302)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 956 (1302)
.+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++.+++.+|
T Consensus 12 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (198)
T TIGR01189 12 ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPELS 89 (198)
T ss_pred CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEcccchHHhhhheEEeccCcccccCCc
Confidence 3569999999999999999999999999999999999765 347999999987532 234567999999988888899
Q ss_pred HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 000753 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1036 (1302)
Q Consensus 957 v~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsg 1036 (1302)
+.||+.+....+. . + .+.+.++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|
T Consensus 90 v~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~ 157 (198)
T TIGR01189 90 ALENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQRRLALARLWLSRAPLWILDEPTTA 157 (198)
T ss_pred HHHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999987643321 1 1 234788999999987776653 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEE
Q 000753 1037 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLL 1079 (1302)
Q Consensus 1037 LD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~ 1079 (1302)
||+.++..+++.|++++++|.|||++||++. + ..+++++.
T Consensus 158 LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~--~~~~~~~~ 197 (198)
T TIGR01189 158 LDKAGVALLAGLLRAHLARGGIVLLTTHQDL-G--LVEARELR 197 (198)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEEcccc-c--ccceEEee
Confidence 9999999999999998778999999999874 2 23465543
No 486
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=5.8e-33 Score=310.12 Aligned_cols=206 Identities=24% Similarity=0.389 Sum_probs=162.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 260 (1302)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~ 90 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-R 90 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-c
Confidence 45899999999999999999999999999999999999887 999999998765432 2467999999988775 6
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHc--CCcccccccccCc
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKIL--GLDICADTMVGDE 338 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~dt~vg~~ 338 (1302)
||+||+.+... .. . .+...+ ... ....+..++.+ |++...+..+++
T Consensus 91 tv~~nl~~~~~--~~-~-~~~~~~---------------------~~~------~~~~~~~l~~l~~~~~~~~~~~~~~- 138 (237)
T cd03252 91 SIRDNIALADP--GM-S-MERVIE---------------------AAK------LAGAHDFISELPEGYDTIVGEQGAG- 138 (237)
T ss_pred hHHHHhhccCC--CC-C-HHHHHH---------------------HHH------HcCcHHHHHhCcccccchhhcCCCc-
Confidence 99999987432 10 0 000000 000 00112344444 555445555544
Q ss_pred cCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEec
Q 000753 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1302)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~ 418 (1302)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++. ++ ..+|++++|+
T Consensus 139 ----LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~~-~~-~~~d~v~~l~ 210 (237)
T cd03252 139 ----LSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA--GRTVIIIAHRLS-TV-KNADRIIVME 210 (237)
T ss_pred ----CCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC--CCEEEEEeCCHH-HH-HhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999863 788888888775 45 5699999999
Q ss_pred CCeEEEEcChhHHHH
Q 000753 419 EGQIVYQGPRDNVLE 433 (1302)
Q Consensus 419 ~G~iv~~G~~~~~~~ 433 (1302)
+|++++.|+.+++.+
T Consensus 211 ~G~i~~~~~~~~~~~ 225 (237)
T cd03252 211 KGRIVEQGSHDELLA 225 (237)
T ss_pred CCEEEEEcCHHHHHh
Confidence 999999999887653
No 487
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-33 Score=315.08 Aligned_cols=213 Identities=27% Similarity=0.363 Sum_probs=171.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC-----CCccceEEECCcccCCCC---ccceEEEEccCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD-----LRASGKITYCGHELNEFV---PQRTCAYISQHDL 255 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~-----~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~ 255 (1302)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|+++.... .++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 45999999999999999999999999999999999998774 113799999999875432 2356899999987
Q ss_pred CCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccc
Q 000753 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1302)
Q Consensus 256 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1302)
.++.+||+||+.++...... . .+... . +....++.+++.+||++..++.+
T Consensus 94 ~~~~~tv~e~l~~~~~~~~~--~-------------~~~~~-~--------------~~~~~~~~~l~~~~l~~~~~~~~ 143 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHAR--R-------------AGALT-H--------------RDGEIAWQALALAGATALVGRDV 143 (272)
T ss_pred CCCCCcHHHHHhhccccccc--c-------------cccCC-H--------------HHHHHHHHHHHHcCcHhhhcCCc
Confidence 66679999999875311000 0 00000 0 00123466888999988777777
Q ss_pred cCccCCCCChHHHHHHHHHHHHh---------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchh
Q 000753 336 GDEMRRGISGGQKKRVTTGEMLV---------GTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPE 406 (1302)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~---------~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e 406 (1302)
++ |||||||||+||+||+ .+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .+
T Consensus 144 ~~-----LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~-~~ 217 (272)
T PRK13547 144 TT-----LSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDP-NL 217 (272)
T ss_pred cc-----CCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCH-HH
Confidence 66 9999999999999999 599999999999999999999999999998765577888887775 47
Q ss_pred HHhhcCeEEEecCCeEEEEcChhHHH
Q 000753 407 TYDLFDDIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 407 ~~~~~D~iilL~~G~iv~~G~~~~~~ 432 (1302)
+.+++|++++|++|++++.|+.+++.
T Consensus 218 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 218 AARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHHhCCEEEEEECCeEEEecCHHHHc
Confidence 77899999999999999999987763
No 488
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=4.1e-32 Score=341.85 Aligned_cols=213 Identities=25% Similarity=0.376 Sum_probs=176.1
Q ss_pred cEEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCcc
Q 000753 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1302)
Q Consensus 853 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1302)
..++++|++|+++. .++.+|+|+|++|++||+++|+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 329 ~~i~~~~v~f~y~~-----------~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~--~~G~I~i~g~~ 395 (571)
T TIGR02203 329 GDVEFRNVTFRYPG-----------RDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEP--DSGQILLDGHD 395 (571)
T ss_pred CeEEEEEEEEEcCC-----------CCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCeEEECCEe
Confidence 46899999987642 123599999999999999999999999999999999997663 47999999987
Q ss_pred CC---hhhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000753 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-------DSMVGLP 1002 (1302)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 1002 (1302)
.+ ...+++.++||+|++.+++ -|++|||.++. +.+.+ ++.++++++.+++.+.. |+.++..
T Consensus 396 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~ 466 (571)
T TIGR02203 396 LADYTLASLRRQVALVSQDVVLFN-DTIANNIAYGR----TEQAD----RAEIERALAAAYAQDFVDKLPLGLDTPIGEN 466 (571)
T ss_pred HHhcCHHHHHhhceEEccCccccc-ccHHHHHhcCC----CCCCC----HHHHHHHHHHcChHHHHHhCcCcccceecCC
Confidence 54 3567788999999998875 59999998652 11222 23477888888876543 4445543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEec
Q 000753 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1302)
Q Consensus 1003 ~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~ 1082 (1302)
...||||||||++||||++++|+||+||||||+||+.+++.+++.|++.. +++|+|++||+++ ....||++++|++
T Consensus 467 -g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~-~~~tiIiitH~~~--~~~~~D~ii~l~~ 542 (571)
T TIGR02203 467 -GVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM-QGRTTLVIAHRLS--TIEKADRIVVMDD 542 (571)
T ss_pred -CCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh-CCCEEEEEehhhH--HHHhCCEEEEEeC
Confidence 35799999999999999999999999999999999999999999999885 5799999999974 6788999999985
Q ss_pred CcEEEEecCC
Q 000753 1083 GGRVIYAGPL 1092 (1302)
Q Consensus 1083 gG~~~~~g~~ 1092 (1302)
|+++..|+.
T Consensus 543 -g~i~~~g~~ 551 (571)
T TIGR02203 543 -GRIVERGTH 551 (571)
T ss_pred -CEEEeeCCH
Confidence 789888874
No 489
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.4e-33 Score=293.74 Aligned_cols=210 Identities=22% Similarity=0.319 Sum_probs=187.2
Q ss_pred cccceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCccceEEEEccCCCCCCCC
Q 000753 181 KRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 181 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 260 (1302)
-.++++++|+|+.++||+|++++|||||||||++++|.|.+.|+ +|+|+++|.+++... +..|||+|.+.-++|.+
T Consensus 12 Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~k~ 87 (300)
T COG4152 12 FGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQEI-KNRIGYLPEERGLYPKM 87 (300)
T ss_pred cCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhhh-hhhcccChhhhccCccC
Confidence 35678999999999999999999999999999999999999997 999999999987643 45799999999999999
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
||.|.|.|-|+++|.... +.....+++|+.+++......+|-+
T Consensus 88 tv~dql~yla~LkGm~~~----------------------------------e~~~~~~~wLer~~i~~~~~~kIk~--- 130 (300)
T COG4152 88 TVEDQLKYLAELKGMPKA----------------------------------EIQKKLQAWLERLEIVGKKTKKIKE--- 130 (300)
T ss_pred cHHHHHHHHHHhcCCcHH----------------------------------HHHHHHHHHHHhccccccccchHHH---
Confidence 999999999998875421 1223467789999999888888766
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
||-|.+|++.+-.+++++|++++||||+|||||.++..+-+.+.++.. .|.|+|.+.|. ...+.++||++++|++|
T Consensus 131 --LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~-~GatIifSsH~-Me~vEeLCD~llmL~kG 206 (300)
T COG4152 131 --LSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKE-EGATIIFSSHR-MEHVEELCDRLLMLKKG 206 (300)
T ss_pred --hhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHh-cCCEEEEecch-HHHHHHHhhhhheecCC
Confidence 999999999999999999999999999999999999999999999986 48888888765 56899999999999999
Q ss_pred eEEEEcChhHHHHHH
Q 000753 421 QIVYQGPRDNVLEFF 435 (1302)
Q Consensus 421 ~iv~~G~~~~~~~~f 435 (1302)
+.|.+|+.+++.+-|
T Consensus 207 ~~V~~G~v~~ir~~~ 221 (300)
T COG4152 207 QTVLYGTVEDIRRSF 221 (300)
T ss_pred ceEEeccHHHHHHhc
Confidence 999999999998744
No 490
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=8.2e-33 Score=313.98 Aligned_cols=207 Identities=25% Similarity=0.324 Sum_probs=170.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC------ccceEEEEccCC--C
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHD--L 255 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~ 255 (1302)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++ .
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 101 (268)
T PRK10419 25 QTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPS---QGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISA 101 (268)
T ss_pred eeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEeccccChhHHHHHHhcEEEEEcChhhc
Confidence 56999999999999999999999999999999999999886 999999999875432 246799999997 4
Q ss_pred CCCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc-cccccc
Q 000753 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTM 334 (1302)
Q Consensus 256 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 334 (1302)
+++..|+.|++.+...... +. +. .+....++.+++.+||. ...++.
T Consensus 102 ~~~~~t~~~~l~~~~~~~~------------------~~--~~-------------~~~~~~~~~~l~~~gl~~~~~~~~ 148 (268)
T PRK10419 102 VNPRKTVREIIREPLRHLL------------------SL--DK-------------AERLARASEMLRAVDLDDSVLDKR 148 (268)
T ss_pred cCCCCCHHHHHHHHHHhhc------------------cC--CH-------------HHHHHHHHHHHHHcCCChhHhhCC
Confidence 6677899999976421000 00 00 00112356688899996 466776
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeE
Q 000753 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1302)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~i 414 (1302)
++. ||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++
T Consensus 149 ~~~-----LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~-~~i~~~~d~i 222 (268)
T PRK10419 149 PPQ-----LSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDL-RLVERFCQRV 222 (268)
T ss_pred Ccc-----CChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCH-HHHHHhCCEE
Confidence 665 9999999999999999999999999999999999999999999998765577888887765 4777899999
Q ss_pred EEecCCeEEEEcChhHHH
Q 000753 415 ILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 415 ilL~~G~iv~~G~~~~~~ 432 (1302)
++|++|++++.|+.+++.
T Consensus 223 ~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 223 MVMDNGQIVETQPVGDKL 240 (268)
T ss_pred EEEECCEEeeeCChhhcc
Confidence 999999999999988764
No 491
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-33 Score=320.98 Aligned_cols=221 Identities=24% Similarity=0.329 Sum_probs=172.4
Q ss_pred EEEEeccceeeeccccccccccccccceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCC---ceeEEEEEEcC
Q 000753 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1302)
Q Consensus 854 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1302)
.+.++|+++.++ .+.+|+++|++|++||+++|+|+||||||||+++|+|.... .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 578888876542 24699999999999999999999999999999999997531 13579999999
Q ss_pred ccCCh-----hhhcceeEEeccCCCCCCCCCHHHHHHHHHHhhCCC---------CCc-HHHHHHHHHHHHHHcCCcccc
Q 000753 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSS---------DVD-TKKRKMFVDEVMELVELKSLN 995 (1302)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~~~~~lr~~~---------~~~-~~~~~~~v~~~l~~l~L~~~~ 995 (1302)
.++.. ...++.++|++|++.+++ .||+||+.+....+... ... .+...+.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87532 234567999999998877 59999998864321100 011 122345678899999884321
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcC
Q 000753 996 DSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1075 (1302)
Q Consensus 996 ~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D 1075 (1302)
..... ..+..||||||||++||+||+.+|+||||||||+|||+.++..+++.|+++++ +.|||++||+++ .+.+.||
T Consensus 191 ~~~~~-~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLD-DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhc-CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 11111 12457999999999999999999999999999999999999999999999976 589999999986 4677899
Q ss_pred eEE-EEecCcEEEEecCC
Q 000753 1076 ELL-LLKRGGRVIYAGPL 1092 (1302)
Q Consensus 1076 ~i~-~l~~gG~~~~~g~~ 1092 (1302)
+++ +|. +|++++.|+.
T Consensus 268 ~i~~~l~-~G~i~~~g~~ 284 (305)
T PRK14264 268 QTAVFLT-GGELVEYDDT 284 (305)
T ss_pred EEEEEec-CCEEEEeCCH
Confidence 975 555 5899998875
No 492
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=310.24 Aligned_cols=206 Identities=20% Similarity=0.332 Sum_probs=164.4
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCC--CCCccceEEECCcccCCC-----CccceEEEEccCCCCC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGK--DLRASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~--~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1302)
++|+|+|++|++||+++|+|||||||||||++|+|.+++ ....+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 589999999999999999999999999999999998753 212489999999987531 1245799999998888
Q ss_pred CCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc----cccc
Q 000753 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CADT 333 (1302)
Q Consensus 258 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 333 (1302)
+ +||+||+.++....+... ..+ ....++.+++.+++.+ ..++
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~-------------------~~~--------------~~~~~~~~l~~~~l~~~l~~~~~~ 142 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKD-------------------KKK--------------LDEIVEKSLKGAALWDEVKDRLKK 142 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCC-------------------HHH--------------HHHHHHHHHHHcCCchhhHHHHhc
Confidence 7 899999988643221100 000 0112344566777642 3455
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCe
Q 000753 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1302)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ 413 (1302)
.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++|+
T Consensus 143 ~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~-~~~~~~~d~ 214 (250)
T PRK14240 143 SALG-----LSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK--DYTIVIVTHNM-QQASRISDK 214 (250)
T ss_pred CCCC-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEEeCH-HHHHhhCCE
Confidence 5554 999999999999999999999999999999999999999999999854 67888877764 478889999
Q ss_pred EEEecCCeEEEEcChhHHH
Q 000753 414 IILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1302)
+++|++|+++..|+.+++.
T Consensus 215 v~~l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 215 TAFFLNGEIVEFGDTVDLF 233 (250)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 493
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=310.28 Aligned_cols=207 Identities=22% Similarity=0.360 Sum_probs=165.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCccceEEECCcccCCC-----CccceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1302)
.++|+|+|+++++|++++|+|||||||||||++|+|.+++. ...+|+|.++|.++... ..++.++|++|++.+
T Consensus 16 ~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14262 16 KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTP 95 (250)
T ss_pred ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCcc
Confidence 35899999999999999999999999999999999998741 12489999999877531 124679999999988
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcc----ccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CAD 332 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~d 332 (1302)
++ +||+||+.+.....+... ... ....++..++.+|+.. ..+
T Consensus 96 ~~-~tv~e~l~~~~~~~~~~~-------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 141 (250)
T PRK14262 96 FP-MSIYDNVAFGPRIHGVKS-------------------KHK--------------LDRIVEESLKKAALWDEVKSELN 141 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCc-------------------HHH--------------HHHHHHHHHHHcCCCchhHHHHh
Confidence 87 899999988643211100 000 0112345677777753 244
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
..++ .||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|++++.|++ .++.+++|
T Consensus 142 ~~~~-----~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tili~sH~~-~~~~~~~d 213 (250)
T PRK14262 142 KPGT-----RLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--NYTIVIVTHNI-GQAIRIAD 213 (250)
T ss_pred CChh-----hcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--CcEEEEEeCCH-HHHHHhCC
Confidence 4444 4999999999999999999999999999999999999999999999864 57888877765 46788999
Q ss_pred eEEEecCCeEEEEcChhHHH
Q 000753 413 DIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1302)
++++|++|+++..|+.+++.
T Consensus 214 ~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 214 YIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred EEEEEECCEEEEecCHHHHH
Confidence 99999999999999988764
No 494
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=4.7e-33 Score=307.54 Aligned_cols=194 Identities=27% Similarity=0.369 Sum_probs=159.1
Q ss_pred eeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCChhhhcceeEEeccCCCCCC--CCCHHHHHHHHH
Q 000753 888 GVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSP--YVTVYESLLYSA 965 (1302)
Q Consensus 888 ~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~--~lTv~E~l~~~~ 965 (1302)
++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.. ..++.++|++|++.+++ .+|+.|++.+..
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 76 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIP--PAKGTVKVAGASPG--KGWRHIGYVPQRHEFAWDFPISVAHTVMSGR 76 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccch--HhhCcEEEecccccccCCCCccHHHHHHhcc
Confidence 4689999999999999999999999999765 34799999998753 23567999999987643 489999998753
Q ss_pred HhhCC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHH
Q 000753 966 WLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 1044 (1302)
Q Consensus 966 ~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgLD~~~~~~ 1044 (1302)
..... .........+.+.++++.+++.+..+..+ ..||||||||++|||+|+.+|++|+|||||+|||+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llilDEP~~~LD~~~~~~ 151 (223)
T TIGR03771 77 TGHIGWLRRPCVADFAAVRDALRRVGLTELADRPV-----GELSGGQRQRVLVARALATRPSVLLLDEPFTGLDMPTQEL 151 (223)
T ss_pred ccccccccCCcHHHHHHHHHHHHHhCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHH
Confidence 21100 00111223456889999999987776653 4799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000753 1045 VMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1302)
Q Consensus 1045 i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~~l~~gG~~~~~g~~~ 1093 (1302)
+.+.|++++++|+|||++||+++ ++.+.||+++++ + |++++.|+..
T Consensus 152 l~~~l~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l-~-G~i~~~~~~~ 197 (223)
T TIGR03771 152 LTELFIELAGAGTAILMTTHDLA-QAMATCDRVVLL-N-GRVIADGTPQ 197 (223)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeecCHH
Confidence 99999999877999999999986 577889999998 5 7999988764
No 495
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=310.62 Aligned_cols=208 Identities=23% Similarity=0.309 Sum_probs=165.3
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC--CccceEEECCcccCCC-----CccceEEEEccCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL--RASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1302)
+++|+|+|+.|++|++++|+||||||||||+++|+|.++|.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 469999999999999999999999999999999999987631 1379999999887531 124579999999999
Q ss_pred CCCCCHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCc----cccc
Q 000753 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1302)
Q Consensus 257 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 332 (1302)
++.+|+.||+.++....+.. .+.+. ....+..++.+++. +..+
T Consensus 97 ~~~~t~~enl~~~~~~~~~~-------------------~~~~~--------------~~~~~~~l~~~~l~~~l~~~~~ 143 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIR-------------------DRDHL--------------MEVAERSLRGAALWDEVKDRLK 143 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCC-------------------CHHHH--------------HHHHHHHHHHcCcchhhhhhhc
Confidence 99999999998754321100 00000 01123344555542 3446
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcC
Q 000753 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1302)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D 412 (1302)
+.+++ ||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 144 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~-~~~~~~~d 215 (252)
T PRK14272 144 TPATG-----LSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK--VTTIIIVTHNM-HQAARVSD 215 (252)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCCH-HHHHHhCC
Confidence 66655 999999999999999999999999999999999999999999999864 57777777665 47888999
Q ss_pred eEEEecCCeEEEEcChhHHH
Q 000753 413 DIILLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1302)
+|++|++|++++.|+.+++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 216 TTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 496
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=8.9e-33 Score=310.22 Aligned_cols=201 Identities=27% Similarity=0.411 Sum_probs=167.8
Q ss_pred EeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCCCCCCH
Q 000753 186 ILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMTV 262 (1302)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV 262 (1302)
+|+|||+++++|++++|+||||||||||+++|+|.++ . +|+|.++|+++..... ++.++|++|++.+++.+||
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv 86 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-G---SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPV 86 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-C---CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccH
Confidence 7999999999999999999999999999999999874 3 8999999998764332 3468999999888888999
Q ss_pred HHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCCC
Q 000753 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1302)
Q Consensus 263 rE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1302)
+||+.+.... +.. ..+ ....++.+++.+||++..++.+++
T Consensus 87 ~~nl~~~~~~-~~~--------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~----- 126 (248)
T PRK03695 87 FQYLTLHQPD-KTR--------------------TEA--------------VASALNEVAEALGLDDKLGRSVNQ----- 126 (248)
T ss_pred HHHHHhcCcc-CCC--------------------cHH--------------HHHHHHHHHHHcCCHhHhcCCccc-----
Confidence 9999875221 000 000 012346688999998888887766
Q ss_pred CChHHHHHHHHHHHHhc-------CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEE
Q 000753 343 ISGGQKKRVTTGEMLVG-------TANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1302)
Q Consensus 343 LSGGqkqRvsia~al~~-------~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~ii 415 (1302)
|||||||||+||+||+. +|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|++ .++.+++|+++
T Consensus 127 LS~G~~qrv~la~al~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~~tvi~~sH~~-~~~~~~~d~i~ 204 (248)
T PRK03695 127 LSGGEWQRVRLAAVVLQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQ-GIAVVMSSHDL-NHTLRHADRVW 204 (248)
T ss_pred CCHHHHHHHHHHHHHhccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhC-CCEEEEEecCH-HHHHHhCCEEE
Confidence 99999999999999997 67999999999999999999999999998753 77888877665 47889999999
Q ss_pred EecCCeEEEEcChhHHH
Q 000753 416 LLSEGQIVYQGPRDNVL 432 (1302)
Q Consensus 416 lL~~G~iv~~G~~~~~~ 432 (1302)
+|++|++++.|+.+++.
T Consensus 205 ~l~~G~i~~~g~~~~~~ 221 (248)
T PRK03695 205 LLKQGKLLASGRRDEVL 221 (248)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999987753
No 497
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.5e-32 Score=342.83 Aligned_cols=209 Identities=24% Similarity=0.382 Sum_probs=169.7
Q ss_pred ceEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCC---ccceEEEEccCCCCCCCC
Q 000753 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEM 260 (1302)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 260 (1302)
+++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+.. .++.++||+|++.+|+.
T Consensus 331 ~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~- 406 (544)
T TIGR01842 331 KPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPT---SGSVRLDGADLKQWDRETFGKHIGYLPQDVELFPG- 406 (544)
T ss_pred ccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEehhhCCHHHHhhheEEecCCcccccc-
Confidence 35899999999999999999999999999999999999987 999999999887654 35789999999999975
Q ss_pred CHHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccC
Q 000753 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1302)
Q Consensus 261 TVrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1302)
|++||+.+.... . +.++..+++... ..+..++ .|++..||.+|+ .+
T Consensus 407 ti~~Ni~~~~~~---~----------------------~~~~~~~~~~~~------~~~~~i~--~l~~gl~t~~~~-~g 452 (544)
T TIGR01842 407 TVAENIARFGEN---A----------------------DPEKIIEAAKLA------GVHELIL--RLPDGYDTVIGP-GG 452 (544)
T ss_pred cHHHHHhccCCC---C----------------------CHHHHHHHHHHh------ChHHHHH--hCccccccccCC-Cc
Confidence 999999753210 0 001111111111 1122333 356677899986 46
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCC
Q 000753 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1302)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G 420 (1302)
+.||||||||++||||++++|++++|||||+|||+.++..+.+.|+++.. .++|+|++.|++. ..+.+|+|++|++|
T Consensus 453 ~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~ith~~~--~~~~~d~i~~l~~G 529 (544)
T TIGR01842 453 ATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKA-RGITVVVITHRPS--LLGCVDKILVLQDG 529 (544)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhh-CCCEEEEEeCCHH--HHHhCCEEEEEECC
Confidence 77999999999999999999999999999999999999999999998753 3689999888874 56789999999999
Q ss_pred eEEEEcChhHHHH
Q 000753 421 QIVYQGPRDNVLE 433 (1302)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1302)
+++++|+++++.+
T Consensus 530 ~i~~~g~~~~l~~ 542 (544)
T TIGR01842 530 RIARFGERDEVLA 542 (544)
T ss_pred EEEeeCCHHHHhh
Confidence 9999999988753
No 498
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.8e-33 Score=303.16 Aligned_cols=182 Identities=25% Similarity=0.331 Sum_probs=154.3
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh--hhhcceeEEeccCCCCCCCCCH
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1302)
+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|+..+++.+||
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~v~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 91 (200)
T PRK13540 14 QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLN--PEKGEILFERQSIKKDLCTYQKQLCFVGHRSGINPYLTL 91 (200)
T ss_pred eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeeEEECCCccccCHHHHHhheEEeccccccCcCCCH
Confidence 469999999999999999999999999999999999765 357999999987642 3456789999999888899999
Q ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 000753 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1302)
Q Consensus 958 ~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPTsgL 1037 (1302)
+||+.+.... .. . ...++++++.+++.+..+..+ ..||+|||||++|||+|+.+|++|+|||||+||
T Consensus 92 ~~~~~~~~~~--~~----~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv~laral~~~p~~lilDEP~~~L 158 (200)
T PRK13540 92 RENCLYDIHF--SP----G--AVGITELCRLFSLEHLIDYPC-----GLLSSGQKRQVALLRLWMSKAKLWLLDEPLVAL 158 (200)
T ss_pred HHHHHHHHhc--Cc----c--hHHHHHHHHHcCCchhhhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCccc
Confidence 9999876421 11 1 135788999999977666553 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCeEE
Q 000753 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELL 1078 (1302)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~t~H~~~~~~~~~~D~i~ 1078 (1302)
|+.++..+.+.|++++++|+|||++||++. ....+|...
T Consensus 159 D~~~~~~l~~~l~~~~~~~~tiii~sh~~~--~~~~~d~~~ 197 (200)
T PRK13540 159 DELSLLTIITKIQEHRAKGGAVLLTSHQDL--PLNKADYEE 197 (200)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEeCCch--hccccchhh
Confidence 999999999999998777999999999974 445566543
No 499
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=8.6e-33 Score=348.38 Aligned_cols=207 Identities=24% Similarity=0.362 Sum_probs=170.4
Q ss_pred eEeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCccceEEECCcccCCCCc---cceEEEEccCCCCCCCCC
Q 000753 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMT 261 (1302)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1302)
++|+|+|++++||+.++|+|+||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .|
T Consensus 349 ~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~T 424 (588)
T PRK13657 349 QGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQ---SGRILIDGTDIRTVTRASLRRNIAVVFQDAGLFN-RS 424 (588)
T ss_pred ceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCEEhhhCCHHHHHhheEEEecCccccc-cc
Confidence 4899999999999999999999999999999999999997 9999999999877643 578999999999996 59
Q ss_pred HHHHHHhhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcchhhhHHHHHHHHcCCcccccccccCccCC
Q 000753 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1302)
Q Consensus 262 VrE~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1302)
++|||.++..- . .++++....+.+. .+..++ .|++..||.+|+ .++
T Consensus 425 i~~Ni~~~~~~--~--------------------~d~~i~~al~~~~---------l~~~i~--~lp~gldt~i~~-~g~ 470 (588)
T PRK13657 425 IEDNIRVGRPD--A--------------------TDEEMRAAAERAQ---------AHDFIE--RKPDGYDTVVGE-RGR 470 (588)
T ss_pred HHHHHhcCCCC--C--------------------CHHHHHHHHHHhC---------HHHHHH--hCcccccchhcC-CCC
Confidence 99999875210 0 0111111111111 111222 367788999986 356
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCchhHHhhcCeEEEecCCe
Q 000753 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1302)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~e~~~~~D~iilL~~G~ 421 (1302)
.||||||||++||||++.+|+|++||||||+||+.++..+.+.|++..+ ++|+|++.|++ +..+.+|+|++|++|+
T Consensus 471 ~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~--~~tvIiitHr~--~~~~~~D~ii~l~~G~ 546 (588)
T PRK13657 471 QLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMK--GRTTFIIAHRL--STVRNADRILVFDNGR 546 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhc--CCEEEEEEecH--HHHHhCCEEEEEECCE
Confidence 7999999999999999999999999999999999999999999988753 68999988887 4678899999999999
Q ss_pred EEEEcChhHHHH
Q 000753 422 IVYQGPRDNVLE 433 (1302)
Q Consensus 422 iv~~G~~~~~~~ 433 (1302)
++.+|+++++.+
T Consensus 547 i~~~g~~~~l~~ 558 (588)
T PRK13657 547 VVESGSFDELVA 558 (588)
T ss_pred EEEeCCHHHHHH
Confidence 999999998864
No 500
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-33 Score=299.13 Aligned_cols=159 Identities=31% Similarity=0.430 Sum_probs=141.8
Q ss_pred ceeecccceeecCCeEEEEecCCCCchHHHHhhhcCCCCCceeEEEEEEcCccCCh-----hhhcceeEEeccCCCCCCC
Q 000753 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-----ETFARVSGYCEQNDIHSPY 954 (1302)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~ 954 (1302)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 13 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (178)
T cd03229 13 KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTDLEDELPPLRRRIGMVFQDFALFPH 90 (178)
T ss_pred eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccchhHHHHhhcEEEEecCCccCCC
Confidence 469999999999999999999999999999999999765 357999999987532 3456789999999988888
Q ss_pred CCHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 000753 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1302)
Q Consensus 955 lTv~E~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~iA~aL~~~P~illLDEPT 1034 (1302)
.|++|++.+. ||||||||++||++|+.+|++++|||||
T Consensus 91 ~t~~~~l~~~------------------------------------------lS~G~~qr~~la~al~~~p~llilDEP~ 128 (178)
T cd03229 91 LTVLENIALG------------------------------------------LSGGQQQRVALARALAMDPDVLLLDEPT 128 (178)
T ss_pred CCHHHheeec------------------------------------------CCHHHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 9999987532 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCeEEEEecC
Q 000753 1035 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1302)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~-g~tvi~t~H~~~~~~~~~~D~i~~l~~g 1083 (1302)
+|||+.++..+++.|++++++ |+|+|+++|++. ++.+.+|++++|++|
T Consensus 129 ~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 129 SALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 999999999999999999876 899999999975 466689999999863
Done!